MD10G1299600.v1.1

COP1-interacting protein 7

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0011159
Physical Location & Seq
Reverse (-)
38698855 .. 38703058
4204 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1299600.v1.1.491

Sequence Viewer

Length: 2526 bp
ATGGAAGCTCCCCTCGACCATGCTTTGTTTCAGCTCACTCCAACTCGAACCAGATGTGACTTGGTGATCTTCTATGGAGCCAAATCTGAGAAACTGGCATCTGGGTTGTTCCAACCCTTTGTTTCTCACCTCAAATCTGTAAAAGATGAGATTTCCAGAGGTGGGTATTCCATTACTCTTCGCCCGCCTACCCAAATGGCACCCTGGTTCACCAAATCCACATTTCAAAGATTTGTGAGGTTTGTTAGCACCCCAGCTGTTCTGGAGAGGTTTGTCAGTATTGAAAAGGAGATTTTGCAGATTGAGAGTTCAGTCCAACCGGAGGAAGGAATTGTATCTGCTAATCAGAGTACAAGGAAATCAGCTGGTTCTTTGGAGAAAAGAGGTGAACTTGAAGAAGCAGGGGATGTTGTAAAAAACGAAAACTCCAAGGTTTGCCTTCGACGCCTTCTTGAAACTCGAGTGGCATTGCTTCGGAAACAGCAAGCCATGGCTTATGCCCGTGGCCTTGTTGCTGGTTTTGAAATCTACAATATGGATGATCTCATTTCTTTTTCGGATGCATTTGGTGCTTCACGCTTAAGGGAAGCATGCATTAACTTCAAGGAATTATACAAGCAAAAGCAGACAGATGGTTTATGGATAAAAGAAGTAGCAGCAGTAGTGGCCTGTTCTTCATCAGATCTGCAATTCACGGGAGCGTCTGAAATTACACTTACAAATGAAGCAGAGGTCACTAATCAAAATGTTATGTTAAATCTTCCCTCTAGCGGTATCCTAAGTAGTGAAAAAGTTCAAGCGCCAATGCCATTTCCGCATCAGAATTCTCAGTACTTTTATGGTTCACTAGGCCATACAAACCAGTTGCCTCCATATCATGGATATCCTTTCCCTACTATGCAGTATTTCCCTCCTCATTATCCAAGGAACATGCAATGGCCTCCCAACATGGATGAAGCAAGCTATGGTCGGGAACCGAATTATCATAGGACTCAGAAGCCATCTTCAAGAAGAAAGAAGAAGAATAAAACACGACCTGAATACTCAGGGGAAGGCAACCAGACTGAGTCCAGGGACTCCACTTCTGAGACTAATTCAGATTCAGAGACACATCAAGAGAGAAAGCATTCTGATATGGAGAATTCATCCAGAAAGAAGTTTAAGAAGAAATCCTCGCGGAAAGTGGTCATTCAAAACATCAACTACATCACACCCAAGAGGAGGGATGGTAATAAAGGAGGAGTTTCTGATGAATCTTTTTCAGATGAGGTGACTGAGAAAGCAGAAGTATTGGAGGTATCCCATGAGTCACACTCGCAAGAAAGAGATGTGGAGAAGAGTCACTCTATGTTTAATGGATCAAGTAATGAGGATTTGACAGTTCGTGCTGTAGTCCCCATTGATGTTCAAGATGCACATTTTATAGTGAAGTCTGAAGATGGTAATTCATTAGCAGAGAGGCCTACTTTGGGGCTCAATCTCGAGAGAACTCCAAAGAAACTAACAGTTTCAGCGGCAGCTGATCCTTTGGTTGCGATGGAGAGGAATGGAACAAATGACTATGAGGTTAAGTTGGAAGATTTTCAGAATGAAGAAAATTTCAGTTCAGCTATGGAGAGAAAAGATTGTGCAGATGAGGACATATTACTTTTGCCGAGATCAGCAAAATCAGAAACTGAAATTAGGTCTGCGTTTTCTGCTTCCGCTGCTGAGTCTACTGTAACCAGGACTGTAAGGGGAGAAGATTGGTTTGTCTTGAATCATTCAAGAAGTACAGAAGACCAGAAGGTACCAATGAAGCAAACAGTTTTTGATGGTGATTGCATCATCACGTCGGAGACAAAAAGCAATATATTGGTAGATGATTCTTTCTTTATACAGTCTCGGTCAGCAGTTGATGATATGTATGAATCACCATGGAAAACAGAAATAAGCATGGATAATAATCTGAGTTTAGCTGCCCAGAAGGAAAATGGAGTTATAGATACTCCACAGACTCGAACATCTGAGCCAGATGACCTTTGCATGATTCTTGAAAGGGATTCCAACTTTGAGTCTGCGGAAATTTCTTGGACTATAGACTATGGAGCAGATATTTCATTTACCGAGGCAAATAGAAAACGTTCTGGTGTTGAGACAACTGATGGTGTGGATAACAAGCCTGCTTCGAACGGTATGGCAACCAATGTGAAGAGCAATAAAGTTCCTGGACCAAAAGAACGCTGTAAAGAAGCAAAGTCTAACATCGTACGGAGATCCCTAGTTAACAACACACCTGATATCAAAAGCAAAAAAATATTTCCTACAAGAGGGCCTATAATACAAAAGAGCAAATTCGAGAAGGAAGAAGAAATTCGGCAAAAGATGGAGGAACTGCGGATAGAACGCCAAAAGCGAATTGCTGAGAAAACTGCAGCGGGTGGCTTTTCTCCGGTAGCACCCAGAAGAGCTTCATTAGAAGGCAAAACAGCAAAGGGCTCTCCCAAGAGTAAACTACAACCTACCAAGAGAACTCTAAATCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

842

Amino Acids

94.58

Weight (kDa)

6.6

Isoelectric Point (pI)

51.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011159)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61100 AT1G61100
fragaria_vesca FvH4_3g04650
malus_domestica MD05G1321000.v1.1 MD10G1299600.v1.1
prunus_persica Prupe.4G041200_v2.0.a1
pyrus_communis pycom05g29580 pycom10g25220
rosa_chinensis RchiOBHm_Chr5g0007571
rosa_laevigata RLG00000031473
rosa_multiflora Rmu_sc0011744.1_g000009 Rmu_sc0033973.1_g000001
rosa_roxburghii Rroxscaffold_1G00068780
rosa_rugosa Rorug04G0428900 Rorug04G0429000
rosa_samantha Rh5AG057000 Rh5BG054100 Rh5CG063900 Rh5DG053200
rosa_wichuraiana Rw5G005360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1789
AccB1I GGYRCC 2 cut(s) 199, 1789
AccB7I CCANNNNNTGG 1 cut(s) 878
AccI GTMKAC 1 cut(s) 1715
AccII CGCG 1 cut(s) 1177
AciI CCGC 9 cut(s) 185, 771, 815, 1177, 1514, 1704, 2060, 2377, 2417
AclI AACGTT 1 cut(s) 2122
AclWI GGATC 3 cut(s) 1366, 1517, 2250
AcsI RAATTY 6 cut(s) 823, 1141, 1597, 2064, 2333, 2352
AcuI CTGAAG 1 cut(s) 1455
AcyI GRCGYC 1 cut(s) 445
AfaI GTAC 5 cut(s) 352, 833, 1774, 1791, 2250
AfiI CCNNNNNNNGG 8 cut(s) 162, 322, 326, 770, 878, 1221, 1469, 2309
AflII CTTAAG 1 cut(s) 580
AjiI CACGTC 1 cut(s) 1833
AjnI CCWGG 4 cut(s) 203, 1070, 1724, 2206
AluBI AGCT 9 cut(s) 8, 34, 257, 365, 963, 1520, 1610, 1958, 2450
AluI AGCT 9 cut(s) 8, 34, 257, 365, 963, 1520, 1610, 1958, 2450
Alw26I GTCTC 5 cut(s) 1082, 1100, 1832, 1887, 2129
AlwI GGATC 3 cut(s) 1366, 1517, 2250
AlwNI CAGNNNCTG 1 cut(s) 1676
Ama87I CYCGRG 2 cut(s) 459, 1481
AoxI GGCC 6 cut(s) 505, 666, 850, 938, 1460, 2312
ApeKI GCWGC 5 cut(s) 656, 1517, 1706, 1958, 2414
ApoI RAATTY 6 cut(s) 823, 1141, 1597, 2064, 2333, 2352
Asp700I GAANNNNTTC 6 cut(s) 792, 1126, 1581, 2122, 2352, 2449
Asp718I GGTACC 1 cut(s) 1789
AspLEI GCGC 1 cut(s) 802
AspS9I GGNCC 2 cut(s) 2210, 2312
AsuHPI GGTGA 7 cut(s) 76, 119, 202, 398, 1282, 1829, 1905
AsuII TTCGAA 1 cut(s) 2168
AvaI CYCGRG 2 cut(s) 459, 1481
AvaII GGWCC 1 cut(s) 2210
BanI GGYRCC 2 cut(s) 199, 1789
BanII GRGCYC 2 cut(s) 1476, 2480
BbsI GAAGAC 1 cut(s) 1785
BbvI GCAGC 5 cut(s) 668, 1529, 1693, 1945, 2426
BccI CCATC 8 cut(s) 626, 1009, 1220, 1433, 1531, 1808, 2138, 2359
BciT130I CCWGG 4 cut(s) 205, 1072, 1726, 2208
BciVI GTATCC 2 cut(s) 785, 1309
BcoDI GTCTC 5 cut(s) 1082, 1100, 1832, 1887, 2129
BfaI CTAG 3 cut(s) 768, 848, 2261
BfmI CTRYAG 3 cut(s) 1389, 2076, 2412
BfoI RGCGCY 1 cut(s) 803
BfrI CTTAAG 1 cut(s) 580
BfuI GTATCC 2 cut(s) 785, 1309
BglII AGATCT 1 cut(s) 682
BisI GCNGC 6 cut(s) 657, 1515, 1518, 1707, 1959, 2415
BlsI GCNGC 6 cut(s) 658, 1516, 1519, 1708, 1960, 2416
BmcAI AGTACT 1 cut(s) 833
Bme1390I CCNGG 4 cut(s) 205, 1072, 1726, 2208
Bme18I GGWCC 1 cut(s) 2210
BmeT110I CYCGRG 2 cut(s) 459, 1481
BmgBI CACGTC 1 cut(s) 1833
BmgT120I GGNCC 2 cut(s) 2210, 2312
BmiI GGNNCC 4 cut(s) 79, 201, 975, 1791
BmrFI CCNGG 4 cut(s) 205, 1072, 1726, 2208
BmsI GCATC 5 cut(s) 107, 550, 826, 1402, 1833
BpiI GAAGAC 1 cut(s) 1785
BplI GAGNNNNNCTC 2 cut(s) 1298, 1330
BpmI CTGGAG 1 cut(s) 284
Bpu14I TTCGAA 1 cut(s) 2168
BsaBI GATNNNNATC 1 cut(s) 1944
BsaHI GRCGYC 1 cut(s) 445
BsaJI CCNNGG 8 cut(s) 203, 429, 489, 502, 923, 1071, 1916, 2106
BsaWI WCCGGW 2 cut(s) 319, 2431
BsaXI ACNNNNNCTCC 4 cut(s) 410, 440, 1213, 1243
Bsc4I CCNNNNNNNGG 8 cut(s) 162, 322, 326, 770, 878, 1221, 1469, 2309
Bse1I ACTGG 2 cut(s) 99, 862
Bse3DI GCAATG 2 cut(s) 467, 941
Bse8I GATNNNNATC 1 cut(s) 1944
BseBI CCWGG 4 cut(s) 205, 1072, 1726, 2208
BseDI CCNNGG 8 cut(s) 203, 429, 489, 502, 923, 1071, 1916, 2106
BseGI GGATG 6 cut(s) 412, 544, 565, 958, 1145, 1231
BseJI GATNNNNATC 1 cut(s) 1944
BseLI CCNNNNNNNGG 8 cut(s) 162, 322, 326, 770, 878, 1221, 1469, 2309
BseMI GCAATG 2 cut(s) 467, 941
BseNI ACTGG 2 cut(s) 99, 862
BseRI GAGGAG 3 cut(s) 903, 1234, 1254
BseXI GCAGC 5 cut(s) 668, 1529, 1693, 1945, 2426
BseYI CCCAGC 1 cut(s) 253
BsgI GTGCAG 1 cut(s) 1650
Bsh1236I CGCG 1 cut(s) 1177
BshFI GGCC 6 cut(s) 507, 668, 852, 940, 1462, 2314
BshNI GGYRCC 2 cut(s) 199, 1789
BsiHKCI CYCGRG 2 cut(s) 459, 1481
BsiSI CCGG 2 cut(s) 320, 2432
BsiWI CGTACG 1 cut(s) 2248
BslFI GGGAC 2 cut(s) 1088, 1379
BslI CCNNNNNNNGG 8 cut(s) 162, 322, 326, 770, 878, 1221, 1469, 2309
BsmAI GTCTC 5 cut(s) 1082, 1100, 1832, 1887, 2129
BsmFI GGGAC 2 cut(s) 1088, 1379
BsmI GAATGC 1 cut(s) 1126
BsnI GGCC 6 cut(s) 507, 668, 852, 940, 1462, 2314
BsoBI CYCGRG 2 cut(s) 459, 1481
Bsp119I TTCGAA 1 cut(s) 2168
Bsp1286I GDGCHC 2 cut(s) 1476, 2480
Bsp143I GATC 7 cut(s) 66, 541, 682, 1358, 1522, 1658, 2255
Bsp19I CCATGG 2 cut(s) 489, 1916
BspACI CCGC 9 cut(s) 185, 771, 815, 1177, 1514, 1704, 2060, 2377, 2417
BspANI GGCC 6 cut(s) 507, 668, 852, 940, 1462, 2314
BspFNI CGCG 1 cut(s) 1177
BspLI GGNNCC 4 cut(s) 79, 201, 975, 1791
BspMAI CTGCAG 1 cut(s) 2416
BspPI GGATC 3 cut(s) 1366, 1517, 2250
BspQI GCTCTTC 2 cut(s) 2186, 2440
BspT104I TTCGAA 1 cut(s) 2168
BspT107I GGYRCC 2 cut(s) 199, 1789
BspTI CTTAAG 1 cut(s) 580
BsrDI GCAATG 2 cut(s) 467, 941
BsrI ACTGG 2 cut(s) 99, 862
BssECI CCNNGG 8 cut(s) 203, 429, 489, 502, 923, 1071, 1916, 2106
BssMI GATC 7 cut(s) 66, 541, 682, 1358, 1522, 1658, 2255
BssNI GRCGYC 1 cut(s) 445
BssT1I CCWWGG 4 cut(s) 429, 489, 923, 1916
Bst2UI CCWGG 4 cut(s) 205, 1072, 1726, 2208
Bst4CI ACNGT 7 cut(s) 1381, 1507, 1720, 1732, 1807, 1881, 2174
Bst6I CTCTTC 4 cut(s) 183, 1331, 2186, 2440
BstACI GRCGYC 1 cut(s) 445
BstAFI CTTAAG 1 cut(s) 580
BstAPI GCANNNNNTGC 1 cut(s) 569
BstBI TTCGAA 1 cut(s) 2168
BstC8I GCNNGC 5 cut(s) 185, 486, 592, 961, 2163
BstDSI CCRYGG 3 cut(s) 489, 502, 1916
BstENI CCTNNNNNAGG 1 cut(s) 2307
BstF5I GGATG 6 cut(s) 412, 544, 565, 958, 1145, 1231
BstFNI CGCG 1 cut(s) 1177
BstH2I RGCGCY 1 cut(s) 803
BstHHI GCGC 1 cut(s) 802
BstKTI GATC 7 cut(s) 69, 544, 685, 1361, 1525, 1661, 2258
BstMAI GTCTC 5 cut(s) 1082, 1100, 1832, 1887, 2129
BstMBI GATC 7 cut(s) 66, 541, 682, 1358, 1522, 1658, 2255
BstMWI GCNNNNNNNGC 6 cut(s) 444, 569, 665, 814, 1697, 1706
BstNI CCWGG 4 cut(s) 205, 1072, 1726, 2208
BstNSI RCATGY 2 cut(s) 594, 934
BstSCI CCNGG 4 cut(s) 203, 1070, 1724, 2206
BstSFI CTRYAG 3 cut(s) 1389, 2076, 2412
BstUI CGCG 1 cut(s) 1177
BstV1I GCAGC 5 cut(s) 668, 1529, 1693, 1945, 2426
BstV2I GAAGAC 1 cut(s) 1785
BstX2I RGATCY 2 cut(s) 682, 2255
BstYI RGATCY 2 cut(s) 682, 2255
BsuI GTATCC 2 cut(s) 785, 1309
BsuRI GGCC 6 cut(s) 507, 668, 852, 940, 1462, 2314
BtgI CCRYGG 3 cut(s) 489, 502, 1916
BtgZI GCGATG 1 cut(s) 1550
BtrI CACGTC 1 cut(s) 1833
BtsCI GGATG 6 cut(s) 412, 544, 565, 958, 1145, 1231
Cac8I GCNNGC 5 cut(s) 185, 486, 592, 961, 2163
CaiI CAGNNNCTG 1 cut(s) 1676
CfoI GCGC 1 cut(s) 802
Cfr13I GGNCC 2 cut(s) 2210, 2312
CseI GACGC 2 cut(s) 453, 690
Csp6I GTAC 5 cut(s) 351, 832, 1773, 1790, 2249
CviQI GTAC 5 cut(s) 351, 832, 1773, 1790, 2249
DpnI GATC 7 cut(s) 68, 543, 684, 1360, 1524, 1660, 2257
DpnII GATC 7 cut(s) 66, 541, 682, 1358, 1522, 1658, 2255
Eam1104I CTCTTC 4 cut(s) 183, 1331, 2186, 2440
EarI CTCTTC 4 cut(s) 183, 1331, 2186, 2440
Eco130I CCWWGG 4 cut(s) 429, 489, 923, 1916
Eco147I AGGCCT 1 cut(s) 1462
Eco24I GRGCYC 2 cut(s) 1476, 2480
Eco32I GATATC 2 cut(s) 884, 2281
Eco47I GGWCC 1 cut(s) 2210
Eco57I CTGAAG 1 cut(s) 1455
Eco88I CYCGRG 2 cut(s) 459, 1481
EcoNI CCTNNNNNAGG 1 cut(s) 2307
EcoO109I RGGNCCY 1 cut(s) 2312
EcoRI GAATTC 2 cut(s) 823, 1141
EcoRII CCWGG 4 cut(s) 203, 1070, 1724, 2206
EcoRV GATATC 2 cut(s) 884, 2281
EcoT14I CCWWGG 4 cut(s) 429, 489, 923, 1916
EcoT22I ATGCAT 2 cut(s) 565, 596
EcoT38I GRGCYC 2 cut(s) 1476, 2480
ErhI CCWWGG 4 cut(s) 429, 489, 923, 1916
FaqI GGGAC 2 cut(s) 1088, 1379
FauI CCCGC 2 cut(s) 192, 2410
FblI GTMKAC 1 cut(s) 1715
Fnu4HI GCNGC 6 cut(s) 657, 1515, 1518, 1707, 1959, 2415
FokI GGATG 6 cut(s) 419, 551, 572, 965, 1132, 1238
FriOI GRGCYC 2 cut(s) 1476, 2480
Fsp4HI GCNGC 6 cut(s) 657, 1515, 1518, 1707, 1959, 2415
FspBI CTAG 3 cut(s) 768, 848, 2261
GlaI GCGC 1 cut(s) 801
GluI GCNGC 6 cut(s) 657, 1515, 1518, 1707, 1959, 2415
GsaI CCCAGC 1 cut(s) 257
GsuI CTGGAG 1 cut(s) 284
HaeII RGCGCY 1 cut(s) 803
HaeIII GGCC 6 cut(s) 507, 668, 852, 940, 1462, 2314
HapII CCGG 2 cut(s) 320, 2432
HgaI GACGC 2 cut(s) 453, 690
HhaI GCGC 1 cut(s) 802
Hin1I GRCGYC 1 cut(s) 445
Hin6I GCGC 1 cut(s) 800
HinP1I GCGC 1 cut(s) 800
HincII GTYRAC 1 cut(s) 2266
HindII GTYRAC 1 cut(s) 2266
HpaI GTTAAC 1 cut(s) 2266
HpaII CCGG 2 cut(s) 320, 2432
HphI GGTGA 7 cut(s) 76, 119, 202, 398, 1282, 1829, 1905
Hpy166II GTNNAC 6 cut(s) 210, 389, 845, 1716, 2266, 2492
Hpy8I GTNNAC 6 cut(s) 210, 389, 845, 1716, 2266, 2492
Hpy99I CGWCG 2 cut(s) 447, 1837
HpyAV CCTTC 8 cut(s) 320, 449, 458, 1046, 1780, 1960, 2335, 2453
HpyCH4III ACNGT 7 cut(s) 1381, 1507, 1720, 1732, 1807, 1881, 2174
HpyCH4IV ACGT 2 cut(s) 1832, 2122
HpyF10VI GCNNNNNNNGC 6 cut(s) 444, 569, 665, 814, 1697, 1706
HpySE526I ACGT 2 cut(s) 1832, 2122
Hsp92I GRCGYC 1 cut(s) 445
HspAI GCGC 1 cut(s) 800
KpnI GGTACC 1 cut(s) 1793
KspAI GTTAAC 1 cut(s) 2266
Kzo9I GATC 7 cut(s) 66, 541, 682, 1358, 1522, 1658, 2255
LguI GCTCTTC 2 cut(s) 2186, 2440
LmnI GCTCC 4 cut(s) 13, 77, 698, 2087
Lsp1109I GCAGC 5 cut(s) 668, 1529, 1693, 1945, 2426
LweI GCATC 5 cut(s) 107, 550, 826, 1402, 1833
MaeI CTAG 3 cut(s) 768, 848, 2261
MaeII ACGT 2 cut(s) 1832, 2122
MaeIII GTNAC 6 cut(s) 56, 733, 1270, 1308, 1340, 1720
MalI GATC 7 cut(s) 68, 543, 684, 1360, 1524, 1660, 2257
MboI GATC 7 cut(s) 66, 541, 682, 1358, 1522, 1658, 2255
MflI RGATCY 2 cut(s) 682, 2255
MhlI GDGCHC 2 cut(s) 1476, 2480
MlyI GAGTC 8 cut(s) 985, 1070, 1076, 1316, 1348, 1721, 1990, 2063
MmeI TCCRAC 6 cut(s) 65, 136, 340, 1554, 1815, 2070
Mph1103I ATGCAT 2 cut(s) 565, 596
MroXI GAANNNNTTC 6 cut(s) 792, 1126, 1581, 2122, 2352, 2449
MseI TTAA 7 cut(s) 581, 597, 755, 1161, 1353, 1569, 2265
MspA1I CMGCKG 6 cut(s) 257, 365, 1514, 1520, 1706, 2417
MspCI CTTAAG 1 cut(s) 580
MspI CCGG 2 cut(s) 320, 2432
MspR9I CCNGG 4 cut(s) 205, 1072, 1726, 2208
Mva1269I GAATGC 1 cut(s) 1126
MvaI CCWGG 4 cut(s) 205, 1072, 1726, 2208
MvnI CGCG 1 cut(s) 1177
MwoI GCNNNNNNNGC 6 cut(s) 444, 569, 665, 814, 1697, 1706
NcoI CCATGG 2 cut(s) 489, 1916
NdeII GATC 7 cut(s) 66, 541, 682, 1358, 1522, 1658, 2255
NlaIV GGNNCC 4 cut(s) 79, 201, 975, 1791
NmeAIII GCCGAG 1 cut(s) 1680
NmuCI GTSAC 5 cut(s) 56, 733, 1270, 1308, 1340
NsiI ATGCAT 2 cut(s) 565, 596
NspI RCATGY 2 cut(s) 594, 934
NspV TTCGAA 1 cut(s) 2168
PaeI GCATGC 1 cut(s) 594
PaeR7I CTCGAG 2 cut(s) 459, 1481
PceI AGGCCT 1 cut(s) 1462
PciSI GCTCTTC 2 cut(s) 2186, 2440
PcsI WCGNNNNNNNCGW 1 cut(s) 2392
PctI GAATGC 1 cut(s) 1126
PdmI GAANNNNTTC 6 cut(s) 792, 1126, 1581, 2122, 2352, 2449
PfeI GAWTC 7 cut(s) 1100, 1253, 1759, 1865, 1910, 2029, 2042
Pfl23II CGTACG 1 cut(s) 2248
PflFI GACNNNGTC 1 cut(s) 1066
PflMI CCANNNNNTGG 1 cut(s) 878
PfoI TCCNGGA 1 cut(s) 2206
PkrI GCNGC 6 cut(s) 658, 1516, 1519, 1708, 1960, 2416
PleI GAGTC 8 cut(s) 985, 1070, 1075, 1315, 1347, 1720, 1990, 2062
PpsI GAGTC 8 cut(s) 985, 1070, 1075, 1315, 1347, 1720, 1990, 2062
Psp1406I AACGTT 1 cut(s) 2122
Psp6I CCWGG 4 cut(s) 203, 1070, 1724, 2206
PspFI CCCAGC 1 cut(s) 253
PspGI CCWGG 4 cut(s) 203, 1070, 1724, 2206
PspLI CGTACG 1 cut(s) 2248
PspN4I GGNNCC 4 cut(s) 79, 201, 975, 1791
PspPI GGNCC 2 cut(s) 2210, 2312
PspXI VCTCGAGB 1 cut(s) 459
PstI CTGCAG 1 cut(s) 2416
PstNI CAGNNNCTG 1 cut(s) 1676
PsuI RGATCY 2 cut(s) 682, 2255
PsyI GACNNNGTC 1 cut(s) 1066
PvuII CAGCTG 3 cut(s) 257, 365, 1520
RsaI GTAC 5 cut(s) 352, 833, 1774, 1791, 2250
RsaNI GTAC 5 cut(s) 351, 832, 1773, 1790, 2249
SapI GCTCTTC 2 cut(s) 2186, 2440
SaqAI TTAA 7 cut(s) 581, 597, 755, 1161, 1353, 1569, 2265
SatI GCNGC 6 cut(s) 657, 1515, 1518, 1707, 1959, 2415
Sau3AI GATC 7 cut(s) 66, 541, 682, 1358, 1522, 1658, 2255
Sau96I GGNCC 2 cut(s) 2210, 2312
ScaI AGTACT 1 cut(s) 833
SchI GAGTC 8 cut(s) 985, 1070, 1076, 1316, 1348, 1721, 1990, 2063
ScrFI CCNGG 4 cut(s) 205, 1072, 1726, 2208
SduI GDGCHC 2 cut(s) 1476, 2480
SfaNI GCATC 5 cut(s) 107, 550, 826, 1402, 1833
SfcI CTRYAG 3 cut(s) 1389, 2076, 2412
Sfr274I CTCGAG 2 cut(s) 459, 1481
SfuI TTCGAA 1 cut(s) 2168
SinI GGWCC 1 cut(s) 2210
SlaI CTCGAG 2 cut(s) 459, 1481
SmlI CTYRAG 3 cut(s) 459, 580, 1481
SmoI CTYRAG 3 cut(s) 459, 580, 1481
SphI GCATGC 1 cut(s) 594
SseBI AGGCCT 1 cut(s) 1462
SsiI CCGC 9 cut(s) 185, 771, 815, 1177, 1514, 1704, 2060, 2377, 2417
SspI AATATT 1 cut(s) 2298
SspMI CTAG 3 cut(s) 768, 848, 2261
StuI AGGCCT 1 cut(s) 1462
StyD4I CCNGG 4 cut(s) 203, 1070, 1724, 2206
StyI CCWWGG 4 cut(s) 429, 489, 923, 1916
TaaI ACNGT 7 cut(s) 1381, 1507, 1720, 1732, 1807, 1881, 2174
TaiI ACGT 2 cut(s) 1835, 2125
TaqI TCGA 8 cut(s) 15, 46, 442, 460, 1482, 1999, 2168, 2337
TaqII GACCGA 1 cut(s) 1875
TatI WGTACW 3 cut(s) 350, 831, 1772
TauI GCSGC 1 cut(s) 1517
TfiI GAWTC 7 cut(s) 1100, 1253, 1759, 1865, 1910, 2029, 2042
Tru1I TTAA 7 cut(s) 581, 597, 755, 1161, 1353, 1569, 2265
Tru9I TTAA 7 cut(s) 581, 597, 755, 1161, 1353, 1569, 2265
TseFI GTSAC 5 cut(s) 56, 733, 1270, 1308, 1340
TseI GCWGC 5 cut(s) 656, 1517, 1706, 1958, 2414
Tsp45I GTSAC 5 cut(s) 56, 733, 1270, 1308, 1340
TspGWI ACGGA 1 cut(s) 2266
Tth111I GACNNNGTC 1 cut(s) 1066
Van91I CCANNNNNTGG 1 cut(s) 878
Vha464I CTTAAG 1 cut(s) 580
VpaK11BI GGWCC 1 cut(s) 2210
XagI CCTNNNNNAGG 1 cut(s) 2307
XapI RAATTY 6 cut(s) 823, 1141, 1597, 2064, 2333, 2352
XceI RCATGY 2 cut(s) 594, 934
XcmI CCANNNNNNNNNTGG 2 cut(s) 58, 1970
XhoI CTCGAG 2 cut(s) 459, 1481
XmiI GTMKAC 1 cut(s) 1715
XmnI GAANNNNTTC 6 cut(s) 792, 1126, 1581, 2122, 2352, 2449
XspI CTAG 3 cut(s) 768, 848, 2261
ZrmI AGTACT 1 cut(s) 833
Zsp2I ATGCAT 2 cut(s) 565, 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.