MD11G1156100.v1.1

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0016416
Physical Location & Seq
Forward (+)
14965531 .. 14969332
3802 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1156100.v1.1.491

Sequence Viewer

Length: 1905 bp
ATGCCATCAGAATCTGATAAGTGGGGATGGAAGCATGTTACTGTGTTTGGCAGGTTTGACAAAGGAAGTGGTACCAAAAGGTGGAAATGCAACCACTGTAACATACGTTATAATGGATCTTATTCTCGTGTTAGAGCCCACCTACTTGGGTTCTCCGGTGTTGGGGTCAAAAGCTGCCCAGCAATAGACAGGTATTTAAGAGAATCCTTTCAGACTTTAGAGGAAGAGCGCATAGCTCACAAGAAGAAAAAATCTTCTGGATGTACAAAGCCTAGCAAGCGCATTCAGACATCACGGCCAAGTCTTACCTGTGCCACTAAAGAAGATATAGATGAAATAGTAGCCAGATTCTTTTATGTTCATGGATTGAATCTCAATGCTGTCAACTCTCCTTACTTTCATGACATGGCTAAAGCAATTTCTACTTTTGGCCCTGGATACAAACCCCTGTCAGTTGATGAGCTTTCTGATTCTTTCCTAACTAGAGAAAAGGGAAGGATAGAAAGATCTTTGGCTCTAGTTAGGGAGTCCTGGCCTCACATTGGATCCTCAATATTGTGTTTTGGTTGCTTAGAAAGTATGCTTGGCTGCTTCCGCATTAATATATTCATCTCCAATCCAAGAGGTCTTATGTTTTTAAAAGCAGTAGATATAGATGATGTTGATGGGGCAGAGAATGTATTTGCAGGTGTTCTTGATGATACTGTTATGGAATTCGGGCCCGGAAATGTGTTTCAGATAATCTCTCATCTAGGCAATGCTAGCAAATTATCTGATTCAGATGTGTTGTCAAAGTTTCCTCAGATTTTTTTGTCTCCGTGTACTTCACACTCTATATGCATGTTGATGGGAGAAATAGCTGAAATGGACTCCCTAAAACCCGTTGTCTACTGTGCTAAGGAAATTGAGCAATGCATTACCACATATCAGCACTTTTCTCCATGTAGGTTCAGTCAAAATTTGAAGGGAAGTGTTGATCCACTTTCTGTGAAGTTTGCACCTTCTTTCTGCATTGTTCAGAGGATTTTTGAGCTAAAGCAACAACTTCAAGAATTGGTTGTCAGCGAAGGTTGGAAGCAATGGAAGATTAGTGCATCAGATGACATTTTAAGTATTGAAGCTGCCATTTTAGGGGATGACTTCTGGAGCAGCGCACATCTGTTGTTGCAAGTATACGAGCCATTTGTAAGATTGCTTCCTACACTGGATATTGATAAACTTGTCATGGGTGATGTTTGTGACTGGCGGTTTCAGGCTGTTGAAGCCGTCAAATGTAAGGATATTGATTATGGCATACAGAATCAGTTGGAAGAGCTGATAGAGAACAGATGGGATGCATTATTTTCTCCACTTCATGCTGCTGGTTACATACTGAACCCTAGACATTTTGGGAAAGGTCCAACCAAAGATAAAATTGTCATGAGAGGTTGGAAAGCCACCCTAGAAAGATATGAACTGGAAAGTGCAAACAGGCTGGTGCTAAGAGAGCAGCTCAGCTCTTACTGGCGACTGAAGGGCTCCTTCGGAGATGAAGATGCTGTGGATTGTAGGGATAAAATGGACCCAGTTGCATGGTGGGAGAACTTTGGATTTGAGACACCGAACTTACAGACACTAGCTGTAAAAATTTTGAGTCAGGTTTCAAGCATTGCAATGTGTCAAAAGATATGGCAAGAATATGAGTTTCCTGGTCACGAAATATCCAACCGATGGGGAGTGGATAGAGTGGAGGATCTTGTTTTTGTGAGAAACAATCTTAGACTTGATAGCCAAAGAAATATCTCAAACTCGTTATCTGGCCAGAAACATGTAAGTTTATGCGCGTCGTCTGGAGCGAAGACATGGGATGGTGCTCATCTTGATCAAACAAAGGTGACTGTAAGTATTCATGACGAAATCTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT

Protein Analysis

635

Amino Acids

71.81

Weight (kDa)

6.31

Isoelectric Point (pI)

38.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 151 - 302 5e-26 Domain of unknown function (DUF659)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016416)

Species Orthologous Gene IDs
malus_domestica MD11G1156100.v1.1
prunus_persica Prupe.6G118200_v2.0.a1 Prupe.I001200_v2.0.a1
pyrus_communis pycom11g12670
rosa_chinensis RchiOBHm_Chr5g0055451
rosa_laevigata RLG00000034990
rosa_multiflora Rmu_co8283751.1_g000001
rosa_roxburghii Rroxscaffold_1G00024870
rosa_rugosa Rorug05G0293000 Rorug05G0293000
rosa_samantha Rh5AG362700 Rh5BG374900 Rh5CG396700 Rh5DG388200
rosa_wichuraiana Rw5G034140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 111
AarI CACCTGC 1 cut(s) 677
Acc36I ACCTGC 2 cut(s) 42, 677
Acc65I GGTACC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 71
AccB7I CCANNNNNTGG 2 cut(s) 81, 1710
AccI GTMKAC 2 cut(s) 888, 1173
AccII CGCG 1 cut(s) 1823
AciI CCGC 2 cut(s) 595, 1246
AclWI GGATC 5 cut(s) 124, 540, 553, 971, 1740
AcoI YGGCCR 2 cut(s) 296, 1798
AcsI RAATTY 3 cut(s) 713, 958, 1626
AcuI CTGAAG 1 cut(s) 1532
AfaI GTAC 3 cut(s) 73, 265, 823
AfiI CCNNNNNNNGG 5 cut(s) 81, 162, 542, 1131, 1710
AflIII ACRYGT 1 cut(s) 1807
AgsI TTSAA 6 cut(s) 370, 964, 1049, 1118, 1262, 1644
AjnI CCWGG 3 cut(s) 433, 530, 1687
AjuI GAANNNNNNNTTGG 2 cut(s) 567, 599
Alw21I GWGCWC 1 cut(s) 1855
Alw26I GTCTC 2 cut(s) 819, 1589
AlwI GGATC 5 cut(s) 124, 540, 553, 971, 1740
AlwNI CAGNNNCTG 1 cut(s) 14
AoxI GGCC 5 cut(s) 296, 430, 533, 719, 1798
ApaI GGGCCC 1 cut(s) 723
ApeKI GCWGC 6 cut(s) 174, 588, 1121, 1149, 1358, 1489
ApoI RAATTY 3 cut(s) 713, 958, 1626
AseI ATTAAT 1 cut(s) 600
Asp700I GAANNNNTTC 1 cut(s) 207
Asp718I GGTACC 1 cut(s) 71
AspLEI GCGC 4 cut(s) 231, 282, 1154, 1823
AspS9I GGNCC 5 cut(s) 431, 719, 720, 1397, 1561
AsuC2I CCSGG 1 cut(s) 723
AsuHPI GGTGA 2 cut(s) 1241, 1885
AsuNHI GCTAGC 1 cut(s) 761
AvaII GGWCC 2 cut(s) 1397, 1561
BaeGI GKGCMC 1 cut(s) 723
BalI TGGCCA 1 cut(s) 1800
BamHI GGATCC 1 cut(s) 545
BanI GGYRCC 1 cut(s) 71
BanII GRGCYC 3 cut(s) 139, 723, 1520
BarI GAAGNNNNNNTAC 2 cut(s) 1179, 1211
BauI CACGAG 1 cut(s) 126
BbsI GAAGAC 1 cut(s) 1844
Bbv12I GWGCWC 1 cut(s) 1855
BbvI GCAGC 6 cut(s) 161, 575, 1108, 1161, 1345, 1501
BccI CCATC 7 cut(s) 13, 21, 659, 841, 1323, 1704, 1841
BceAI ACGGC 2 cut(s) 311, 1250
BciT130I CCWGG 3 cut(s) 435, 532, 1689
BciVI GTATCC 1 cut(s) 431
BclI TGATCA 1 cut(s) 1861
BcnI CCSGG 1 cut(s) 723
BcoDI GTCTC 2 cut(s) 819, 1589
BfaI CTAG 8 cut(s) 273, 483, 518, 752, 762, 1380, 1442, 1616
BfuAI ACCTGC 2 cut(s) 42, 677
BfuI GTATCC 1 cut(s) 431
BglII AGATCT 1 cut(s) 506
BisI GCNGC 6 cut(s) 175, 589, 1122, 1150, 1359, 1490
BlpI GCTNAGC 1 cut(s) 1493
BlsI GCNGC 6 cut(s) 176, 590, 1123, 1151, 1360, 1491
Bme1390I CCNGG 4 cut(s) 435, 532, 723, 1689
Bme18I GGWCC 2 cut(s) 1397, 1561
BmgT120I GGNCC 5 cut(s) 431, 719, 720, 1397, 1561
BmiI GGNNCC 5 cut(s) 73, 547, 721, 1519, 1563
BmrFI CCNGG 4 cut(s) 435, 532, 723, 1689
BmrI ACTGGG 1 cut(s) 1559
BmsI GCATC 3 cut(s) 1103, 1324, 1525
BmtI GCTAGC 1 cut(s) 765
BmuI ACTGGG 1 cut(s) 1559
BpiI GAAGAC 1 cut(s) 1844
BplI GAGNNNNNCTC 2 cut(s) 1476, 1508
BpmI CTGGAG 2 cut(s) 1165, 1851
Bpu10I CCTNAGC 1 cut(s) 897
Bpu1102I GCTNAGC 1 cut(s) 1493
BpuMI CCSGG 1 cut(s) 723
BsaJI CCNNGG 1 cut(s) 433
BsaWI WCCGGW 1 cut(s) 155
Bsc4I CCNNNNNNNGG 5 cut(s) 81, 162, 542, 1131, 1710
Bse1I ACTGG 5 cut(s) 1209, 1247, 1461, 1508, 1565
Bse3DI GCAATG 5 cut(s) 763, 917, 1085, 1647, 1659
BseBI CCWGG 3 cut(s) 435, 532, 1689
BseDI CCNNGG 1 cut(s) 433
BseGI GGATG 5 cut(s) 32, 266, 1141, 1339, 1852
BseLI CCNNNNNNNGG 5 cut(s) 81, 162, 542, 1131, 1710
BseMI GCAATG 5 cut(s) 763, 917, 1085, 1647, 1659
BseMII CTCAG 2 cut(s) 815, 1507
BseNI ACTGG 5 cut(s) 1209, 1247, 1461, 1508, 1565
BseSI GKGCMC 1 cut(s) 723
BseXI GCAGC 6 cut(s) 161, 575, 1108, 1161, 1345, 1501
BseYI CCCAGC 1 cut(s) 178
Bsh1236I CGCG 1 cut(s) 1823
BshFI GGCC 5 cut(s) 298, 432, 535, 721, 1800
BshNI GGYRCC 1 cut(s) 71
BsiHKAI GWGCWC 1 cut(s) 1855
BsiSI CCGG 2 cut(s) 156, 723
BslI CCNNNNNNNGG 5 cut(s) 81, 162, 542, 1131, 1710
BsmAI GTCTC 2 cut(s) 819, 1589
BsmI GAATGC 1 cut(s) 282
BsnI GGCC 5 cut(s) 298, 432, 535, 721, 1800
Bsp120I GGGCCC 1 cut(s) 719
Bsp1286I GDGCHC 4 cut(s) 139, 723, 1520, 1855
Bsp1407I TGTACA 1 cut(s) 263
Bsp143I GATC 6 cut(s) 116, 506, 545, 976, 1732, 1861
Bsp1720I GCTNAGC 1 cut(s) 1493
BspACI CCGC 2 cut(s) 595, 1246
BspANI GGCC 5 cut(s) 298, 432, 535, 721, 1800
BspCNI CTCAG 2 cut(s) 814, 1506
BspFNI CGCG 1 cut(s) 1823
BspHI TCATGA 3 cut(s) 400, 1419, 1888
BspLI GGNNCC 5 cut(s) 73, 547, 721, 1519, 1563
BspMI ACCTGC 2 cut(s) 42, 677
BspOI GCTAGC 1 cut(s) 765
BspPI GGATC 5 cut(s) 124, 540, 553, 971, 1740
BspQI GCTCTTC 2 cut(s) 219, 1305
BspT107I GGYRCC 1 cut(s) 71
BsrDI GCAATG 5 cut(s) 763, 917, 1085, 1647, 1659
BsrGI TGTACA 1 cut(s) 263
BsrI ACTGG 5 cut(s) 1209, 1247, 1461, 1508, 1565
BssECI CCNNGG 1 cut(s) 433
BssMI GATC 6 cut(s) 116, 506, 545, 976, 1732, 1861
BssNAI GTATAC 1 cut(s) 1174
BssSI CACGAG 1 cut(s) 126
Bst1107I GTATAC 1 cut(s) 1174
Bst2BI CACGAG 1 cut(s) 126
Bst2UI CCWGG 3 cut(s) 435, 532, 1689
Bst4CI ACNGT 5 cut(s) 43, 98, 706, 893, 1879
Bst6I CTCTTC 2 cut(s) 219, 1305
BstAUI TGTACA 1 cut(s) 263
BstC8I GCNNGC 2 cut(s) 278, 763
BstDEI CTNAG 6 cut(s) 571, 801, 897, 1481, 1493, 1757
BstF5I GGATG 5 cut(s) 32, 266, 1141, 1339, 1852
BstFNI CGCG 1 cut(s) 1823
BstHHI GCGC 4 cut(s) 231, 282, 1154, 1823
BstKTI GATC 6 cut(s) 119, 509, 548, 979, 1735, 1864
BstMAI GTCTC 2 cut(s) 819, 1589
BstMBI GATC 6 cut(s) 116, 506, 545, 976, 1732, 1861
BstMWI GCNNNNNNNGC 5 cut(s) 277, 594, 762, 1262, 1486
BstNI CCWGG 3 cut(s) 435, 532, 1689
BstNSI RCATGY 3 cut(s) 38, 844, 1811
BstSCI CCNGG 4 cut(s) 433, 530, 721, 1687
BstSLI GKGCMC 1 cut(s) 723
BstUI CGCG 1 cut(s) 1823
BstV1I GCAGC 6 cut(s) 161, 575, 1108, 1161, 1345, 1501
BstV2I GAAGAC 1 cut(s) 1844
BstX2I RGATCY 4 cut(s) 116, 506, 545, 1732
BstXI CCANNNNNNTGG 2 cut(s) 146, 1572
BstYI RGATCY 4 cut(s) 116, 506, 545, 1732
BstZ17I GTATAC 1 cut(s) 1174
BsuI GTATCC 1 cut(s) 431
BsuRI GGCC 5 cut(s) 298, 432, 535, 721, 1800
BtsCI GGATG 5 cut(s) 32, 266, 1141, 1339, 1852
BtsIMutI CAGTG 2 cut(s) 94, 1202
BveI ACCTGC 2 cut(s) 42, 677
Cac8I GCNNGC 2 cut(s) 278, 763
CaiI CAGNNNCTG 1 cut(s) 14
CciI TCATGA 3 cut(s) 400, 1419, 1888
CfoI GCGC 4 cut(s) 231, 282, 1154, 1823
Cfr13I GGNCC 5 cut(s) 431, 719, 720, 1397, 1561
CseI GACGC 1 cut(s) 1812
Csp6I GTAC 3 cut(s) 72, 264, 822
CspCI CAANNNNNGTGG 2 cut(s) 49, 84
CviQI GTAC 3 cut(s) 72, 264, 822
DdeI CTNAG 6 cut(s) 571, 801, 897, 1481, 1493, 1757
DpnI GATC 6 cut(s) 118, 508, 547, 978, 1734, 1863
DpnII GATC 6 cut(s) 116, 506, 545, 976, 1732, 1861
DraI TTTAAA 1 cut(s) 639
EaeI YGGCCR 2 cut(s) 296, 1798
Eam1104I CTCTTC 2 cut(s) 219, 1305
EarI CTCTTC 2 cut(s) 219, 1305
Eco24I GRGCYC 3 cut(s) 139, 723, 1520
Eco47I GGWCC 2 cut(s) 1397, 1561
Eco57I CTGAAG 1 cut(s) 1532
EcoRI GAATTC 1 cut(s) 713
EcoRII CCWGG 3 cut(s) 433, 530, 1687
EcoT22I ATGCAT 3 cut(s) 842, 917, 1339
EcoT38I GRGCYC 3 cut(s) 139, 723, 1520
FalI AAGNNNNNCTT 2 cut(s) 1505, 1537
FbaI TGATCA 1 cut(s) 1861
FblI GTMKAC 2 cut(s) 888, 1173
Fnu4HI GCNGC 6 cut(s) 175, 589, 1122, 1150, 1359, 1490
FokI GGATG 5 cut(s) 39, 273, 1148, 1346, 1859
FriOI GRGCYC 3 cut(s) 139, 723, 1520
Fsp4HI GCNGC 6 cut(s) 175, 589, 1122, 1150, 1359, 1490
FspBI CTAG 8 cut(s) 273, 483, 518, 752, 762, 1380, 1442, 1616
GlaI GCGC 4 cut(s) 230, 281, 1153, 1822
GluI GCNGC 6 cut(s) 175, 589, 1122, 1150, 1359, 1490
GsaI CCCAGC 1 cut(s) 182
GsuI CTGGAG 2 cut(s) 1165, 1851
HaeIII GGCC 5 cut(s) 298, 432, 535, 721, 1800
HapII CCGG 2 cut(s) 156, 723
HgaI GACGC 1 cut(s) 1812
HhaI GCGC 4 cut(s) 231, 282, 1154, 1823
Hin6I GCGC 4 cut(s) 229, 280, 1152, 1821
HinP1I GCGC 4 cut(s) 229, 280, 1152, 1821
HincII GTYRAC 1 cut(s) 385
HindII GTYRAC 1 cut(s) 385
HpaII CCGG 2 cut(s) 156, 723
HphI GGTGA 2 cut(s) 1241, 1885
Hpy166II GTNNAC 4 cut(s) 385, 822, 889, 1174
Hpy8I GTNNAC 4 cut(s) 385, 822, 889, 1174
Hpy99I CGWCG 1 cut(s) 1828
HpyAV CCTTC 6 cut(s) 489, 958, 1011, 1061, 1507, 1531
HpyCH4III ACNGT 5 cut(s) 43, 98, 706, 893, 1879
HpyCH4IV ACGT 1 cut(s) 106
HpyF10VI GCNNNNNNNGC 5 cut(s) 277, 594, 762, 1262, 1486
HpyF3I CTNAG 6 cut(s) 571, 801, 897, 1481, 1493, 1757
HpySE526I ACGT 1 cut(s) 106
HspAI GCGC 4 cut(s) 229, 280, 1152, 1821
KpnI GGTACC 1 cut(s) 75
Ksp22I TGATCA 1 cut(s) 1861
Kzo9I GATC 6 cut(s) 116, 506, 545, 976, 1732, 1861
LguI GCTCTTC 2 cut(s) 219, 1305
LmnI GCTCC 3 cut(s) 1146, 1523, 1832
Lsp1109I GCAGC 6 cut(s) 161, 575, 1108, 1161, 1345, 1501
LweI GCATC 3 cut(s) 1103, 1324, 1525
MaeI CTAG 8 cut(s) 273, 483, 518, 752, 762, 1380, 1442, 1616
MaeII ACGT 1 cut(s) 106
MaeIII GTNAC 6 cut(s) 37, 98, 1238, 1364, 1691, 1873
MalI GATC 6 cut(s) 118, 508, 547, 978, 1734, 1863
MboI GATC 6 cut(s) 116, 506, 545, 976, 1732, 1861
MboII GAAGA 8 cut(s) 236, 246, 256, 335, 1096, 1322, 1544, 1849
MflI RGATCY 4 cut(s) 116, 506, 545, 1732
MhlI GDGCHC 4 cut(s) 139, 723, 1520, 1855
MlsI TGGCCA 1 cut(s) 1800
MluCI AATT 8 cut(s) 417, 713, 767, 903, 958, 1052, 1413, 1626
MluNI TGGCCA 1 cut(s) 1800
MlyI GAGTC 3 cut(s) 536, 863, 1642
MmeI TCCRAC 5 cut(s) 1052, 1287, 1409, 1424, 1728
MnlI CCTC 8 cut(s) 214, 546, 559, 617, 810, 1014, 1418, 1723
Mox20I TGGCCA 1 cut(s) 1800
Mph1103I ATGCAT 3 cut(s) 842, 917, 1339
MroXI GAANNNNTTC 1 cut(s) 207
MscI TGGCCA 1 cut(s) 1800
MseI TTAA 4 cut(s) 197, 600, 638, 1109
MslI CAYNNNNRTG 2 cut(s) 845, 1652
Msp20I TGGCCA 1 cut(s) 1800
MspI CCGG 2 cut(s) 156, 723
MspR9I CCNGG 4 cut(s) 435, 532, 723, 1689
Mva1269I GAATGC 1 cut(s) 282
MvaI CCWGG 3 cut(s) 435, 532, 1689
MvnI CGCG 1 cut(s) 1823
MwoI GCNNNNNNNGC 5 cut(s) 277, 594, 762, 1262, 1486
NciI CCSGG 1 cut(s) 723
NdeII GATC 6 cut(s) 116, 506, 545, 976, 1732, 1861
NheI GCTAGC 1 cut(s) 761
NlaIV GGNNCC 5 cut(s) 73, 547, 721, 1519, 1563
NmuCI GTSAC 3 cut(s) 1238, 1691, 1873
NsiI ATGCAT 3 cut(s) 842, 917, 1339
NspI RCATGY 3 cut(s) 38, 844, 1811
PagI TCATGA 3 cut(s) 400, 1419, 1888
PaqCI CACCTGC 1 cut(s) 677
PciI ACATGT 1 cut(s) 1807
PciSI GCTCTTC 2 cut(s) 219, 1305
PcsI WCGNNNNNNNCGW 1 cut(s) 1832
PctI GAATGC 1 cut(s) 282
PdmI GAANNNNTTC 1 cut(s) 207
PfeI GAWTC 7 cut(s) 11, 203, 348, 370, 470, 776, 1300
PflMI CCANNNNNTGG 2 cut(s) 81, 1710
PkrI GCNGC 6 cut(s) 176, 590, 1123, 1151, 1360, 1491
PleI GAGTC 3 cut(s) 535, 863, 1641
PpsI GAGTC 3 cut(s) 535, 863, 1641
PscI ACATGT 1 cut(s) 1807
PshBI ATTAAT 1 cut(s) 600
PsiI TTATAA 1 cut(s) 111
Psp6I CCWGG 3 cut(s) 433, 530, 1687
PspFI CCCAGC 1 cut(s) 178
PspGI CCWGG 3 cut(s) 433, 530, 1687
PspN4I GGNNCC 5 cut(s) 73, 547, 721, 1519, 1563
PspOMI GGGCCC 1 cut(s) 719
PspPI GGNCC 5 cut(s) 431, 719, 720, 1397, 1561
PstNI CAGNNNCTG 1 cut(s) 14
PsuI RGATCY 4 cut(s) 116, 506, 545, 1732
RsaI GTAC 3 cut(s) 73, 265, 823
RsaNI GTAC 3 cut(s) 72, 264, 822
RseI CAYNNNNRTG 2 cut(s) 845, 1652
SapI GCTCTTC 2 cut(s) 219, 1305
SaqAI TTAA 4 cut(s) 197, 600, 638, 1109
SatI GCNGC 6 cut(s) 175, 589, 1122, 1150, 1359, 1490
Sau3AI GATC 6 cut(s) 116, 506, 545, 976, 1732, 1861
Sau96I GGNCC 5 cut(s) 431, 719, 720, 1397, 1561
SchI GAGTC 3 cut(s) 536, 863, 1642
ScrFI CCNGG 4 cut(s) 435, 532, 723, 1689
SduI GDGCHC 4 cut(s) 139, 723, 1520, 1855
SfaNI GCATC 3 cut(s) 1103, 1324, 1525
SinI GGWCC 2 cut(s) 1397, 1561
SmiMI CAYNNNNRTG 2 cut(s) 845, 1652
Sse9I AATT 8 cut(s) 417, 713, 767, 903, 958, 1052, 1413, 1626
SsiI CCGC 2 cut(s) 595, 1246
SspI AATATT 1 cut(s) 555
SspMI CTAG 8 cut(s) 273, 483, 518, 752, 762, 1380, 1442, 1616
StyD4I CCNGG 4 cut(s) 433, 530, 721, 1687
TaaI ACNGT 5 cut(s) 43, 98, 706, 893, 1879
TaiI ACGT 1 cut(s) 109
TasI AATT 8 cut(s) 417, 713, 767, 903, 958, 1052, 1413, 1626
TatI WGTACW 2 cut(s) 263, 821
TfiI GAWTC 7 cut(s) 11, 203, 348, 370, 470, 776, 1300
Tru1I TTAA 4 cut(s) 197, 600, 638, 1109
Tru9I TTAA 4 cut(s) 197, 600, 638, 1109
TscAI CASTG 2 cut(s) 101, 1209
TseFI GTSAC 3 cut(s) 1238, 1691, 1873
TseI GCWGC 6 cut(s) 174, 588, 1121, 1149, 1358, 1489
Tsp45I GTSAC 3 cut(s) 1238, 1691, 1873
TspDTI ATGAA 8 cut(s) 348, 350, 389, 598, 1343, 1467, 1545, 1877
TspGWI ACGGA 1 cut(s) 807
TspRI CASTG 2 cut(s) 101, 1209
Van91I CCANNNNNTGG 2 cut(s) 81, 1710
VpaK11BI GGWCC 2 cut(s) 1397, 1561
VspI ATTAAT 1 cut(s) 600
XapI RAATTY 3 cut(s) 713, 958, 1626
XceI RCATGY 3 cut(s) 38, 844, 1811
XcmI CCANNNNNNNNNTGG 1 cut(s) 1572
XmiI GTMKAC 2 cut(s) 888, 1173
XmnI GAANNNNTTC 1 cut(s) 207
XspI CTAG 8 cut(s) 273, 483, 518, 752, 762, 1380, 1442, 1616
Zsp2I ATGCAT 3 cut(s) 842, 917, 1339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.