Rmu_co8283751.1_g000001

Protein of unknown function (DUF 659)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8283751.1
Physical Location & Seq
Reverse (-)
1 .. 361
361 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8283751.1_g000001.1.cds

Sequence Viewer

Length: 321 bp
atggatttgttaaaacctgttgtcctatgtgctaaggaaattaagcattgcattactacataccagcagttttctccatgtagtttcaatcaaaatatggagggaagctctgatccactgtctatgacgtttgcaccttccttctgcattgtccagaggatttttgagctcaagcgactgcttcaagagttagttaatagtgaagggtggaagcaatggaagattagtaatccagatgacattttaagtattgaagaagccattttaagggatgatttctggagcgatgcatatttgctgttgcaattgtttgagccattt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

107

Amino Acids

12.49

Weight (kDa)

4.59

Isoelectric Point (pI)

49.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016416)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 107
AfiI CCNNNNNNNGG 1 cut(s) 267
AgsI TTSAA 3 cut(s) 88, 185, 254
AluBI AGCT 2 cut(s) 108, 169
AluI AGCT 2 cut(s) 108, 169
Alw21I GWGCWC 1 cut(s) 171
AlwI GGATC 1 cut(s) 107
BanII GRGCYC 1 cut(s) 171
Bbv12I GWGCWC 1 cut(s) 171
BmsI GCATC 1 cut(s) 277
BplI GAGNNNNNCTC 2 cut(s) 92, 124
BpmI CTGGAG 1 cut(s) 301
Bpu10I CCTNAGC 1 cut(s) 33
BpuEI CTTGAG 1 cut(s) 155
Bsc4I CCNNNNNNNGG 1 cut(s) 267
Bse3DI GCAATG 2 cut(s) 46, 221
BseGI GGATG 1 cut(s) 277
BseLI CCNNNNNNNGG 1 cut(s) 267
BseMI GCAATG 2 cut(s) 46, 221
BsiHKAI GWGCWC 1 cut(s) 171
BslI CCNNNNNNNGG 1 cut(s) 267
Bsp1286I GDGCHC 1 cut(s) 171
Bsp143I GATC 1 cut(s) 112
BspPI GGATC 1 cut(s) 107
BsrDI GCAATG 2 cut(s) 46, 221
BssMI GATC 1 cut(s) 112
Bst4CI ACNGT 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 33
BstF5I GGATG 1 cut(s) 277
BstKTI GATC 1 cut(s) 115
BstMBI GATC 1 cut(s) 112
BtgZI GCGATG 1 cut(s) 300
BtsCI GGATG 1 cut(s) 277
BtsIMutI CAGTG 1 cut(s) 116
CviAII CATG 1 cut(s) 78
CviJI RGCY 4 cut(s) 108, 169, 260, 316
CviKI_1 RGCY 4 cut(s) 108, 169, 260, 316
DdeI CTNAG 1 cut(s) 33
DpnI GATC 1 cut(s) 114
DpnII GATC 1 cut(s) 112
Ecl136II GAGCTC 1 cut(s) 169
Eco24I GRGCYC 1 cut(s) 171
Eco53kI GAGCTC 1 cut(s) 169
EcoICRI GAGCTC 1 cut(s) 169
EcoT22I ATGCAT 1 cut(s) 292
EcoT38I GRGCYC 1 cut(s) 171
FaeI CATG 1 cut(s) 81
FaiI YATR 6 cut(s) 28, 61, 79, 98, 125, 292
FatI CATG 1 cut(s) 77
FokI GGATG 1 cut(s) 284
FriOI GRGCYC 1 cut(s) 171
GsuI CTGGAG 1 cut(s) 301
Hin1II CATG 1 cut(s) 81
Hpy188I TCNGA 1 cut(s) 112
Hpy188III TCNNGA 4 cut(s) 154, 185, 233, 280
HpyAV CCTTC 3 cut(s) 147, 151, 197
HpyCH4III ACNGT 1 cut(s) 120
HpyCH4IV ACGT 1 cut(s) 128
HpyCH4V TGCA 5 cut(s) 51, 134, 147, 290, 304
HpyF3I CTNAG 1 cut(s) 33
HpySE526I ACGT 1 cut(s) 128
Hsp92II CATG 1 cut(s) 81
Kzo9I GATC 1 cut(s) 112
LmnI GCTCC 1 cut(s) 282
LpnPI CCDG 5 cut(s) 30, 77, 167, 246, 265
LweI GCATC 1 cut(s) 277
MaeII ACGT 1 cut(s) 128
MalI GATC 1 cut(s) 114
MboI GATC 1 cut(s) 112
MboII GAAGA 2 cut(s) 232, 266
MfeI CAATTG 1 cut(s) 305
MhlI GDGCHC 1 cut(s) 171
MluCI AATT 2 cut(s) 39, 305
MnlI CCTC 2 cut(s) 94, 150
Mph1103I ATGCAT 1 cut(s) 292
MseI TTAA 5 cut(s) 11, 42, 195, 245, 266
MunI CAATTG 1 cut(s) 305
NdeII GATC 1 cut(s) 112
NlaIII CATG 1 cut(s) 81
NsiI ATGCAT 1 cut(s) 292
Psp124BI GAGCTC 1 cut(s) 171
SacI GAGCTC 1 cut(s) 171
SaqAI TTAA 5 cut(s) 11, 42, 195, 245, 266
Sau3AI GATC 1 cut(s) 112
SduI GDGCHC 1 cut(s) 171
SetI ASST 5 cut(s) 19, 110, 131, 139, 171
SfaNI GCATC 1 cut(s) 277
SgeI CNNG 8 cut(s) 29, 76, 90, 166, 184, 197, 245, 292
SmlI CTYRAG 1 cut(s) 170
SmoI CTYRAG 1 cut(s) 170
Sse9I AATT 2 cut(s) 39, 305
SstI GAGCTC 1 cut(s) 171
TaaI ACNGT 1 cut(s) 120
TaiI ACGT 1 cut(s) 131
TasI AATT 2 cut(s) 39, 305
Tru1I TTAA 5 cut(s) 11, 42, 195, 245, 266
Tru9I TTAA 5 cut(s) 11, 42, 195, 245, 266
TscAI CASTG 1 cut(s) 123
TspRI CASTG 1 cut(s) 123
Zsp2I ATGCAT 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.