MD11G1182500.v1.1

Belongs to the multicopper oxidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0011474
Physical Location & Seq
Forward (+)
22479062 .. 22485544
6483 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1182500.v1.1.491

Sequence Viewer

Length: 1764 bp
ATGGGGACGAAGACAACATGTAGGAGGCTTATTAAGGCCCCAGCATCCCAAATGTTAGTGGTTGCGTGCATATTTATGTTGCTGGTTGAGTCATCGGCGGGTTCAAAAGCCAGGCACTTCAAATGGGACGTGGAGTATGTGTTTTGGTCACCGGATTGCATCGAAAATGTTGTGATGGGGATCAATGGCCAGTTTCCAGGGCCGACCATCCGAGCCAAAGCTGGAGACACAGTGGTTATTGATCTCACTAACAAACTCCACACCGAGGGAGTTGTTATTCACTGGCATGGAATCAGACAGTTTGGAAGTCCTTGGGCAGATGGAACAGCATCCATCTCACAATGTGTCATCAACCCTGGAGAGACCTTCACTTATAGGTTCAAAGTTGACAAGGCTGGGACATACTTTTACCACGGGCACTACGGAATGCAAAGATCAGCAGGGTTGTACGGGTCTCTGGTTGTGGACGTAGAAGATGGCAGGAAAGAGCCGTTCCACTACGACGGCGAGTTTAACCTTTTACTGAGCGACTGGTGGCATGAAAGCGTTCACCACCAAGAAGTTGGCCTCTCTTCCAACCCTCTCCGTTGGATTGGTGAACCCCAGACATTGCTGATCAATGGGAGGGGCCAGTACAACTGTTCTCTGGCAGCGCGCTATAGCAATTCTAGTTCAAGCCAGTGCCAATTAAGAGGAAGCGAACATTGCGCACCCGAAATACTCCATGTGCTTCCAAATAAGATCTACAGGCTCAGGATAGCCAGCACCACTGCCCTAGCATCCCTCAACTTGGCCATTGGGAATCACAAAATGGTGGTGGTGGAAGCTGACGGAAATTATGTGACGCCATTTGCGGTTGATGACTTGGACATCTACTCAGGCGAGAGCTACTCAGTCCTCATAACAACCAACCAAGACCCTTCCAACAACTACTGGCTTTCAGCAGGAGTGAGAGGAAGGGAACCCAAAACCCCGCAGGGTCTTTCAGTCCTAAACTACCGCCCAAACTCCGCTTCAAAGCTCCCCGCTTCGTCACCTCCCACCACACCTGCATGGAATGATTACGCCCACAGCAAGTCCTTCAGCAACAAAATTCTGGCCCTGATGGGCTCCCCAAAGCCTCCCAAGAATTACGACCGTCGGATCACCCTCCTCAACACCCAAAACAAGATCAACGGCTACACCAAGTGGGCCATTAACAATGTCTCCCTAACGTTACCGCCCACTCCTTACTTGGGATCCATTAAGTACGGTTTAAGGCACGCGTTTCAGCAGAATAGCCCGCCGGAGAGCTTCTCCAACGACTACGACGTGATGAAGCAGCCCGTCAACCCTAACACCACCACCGGGAACGGGGATTACATACTGGCCATGAACACAACAGTCGATATCATACTTCAAAACGCGAACGCACTGACCGCTAACGTGAGCGAAATACACCCATGGCACTTGCATGGGCACGACTTTTGGGTATTGGGGTACGGTGAAGGCAAGTTTGACCCCAAGAAAGATGAGAAGAAATTGAACTTGAAGAATCCACCGCTGCGGAATACGGCGGTGATATTTCCTTACGGGTGGACGGCTCTTAGGTTTGTGGCCGACAATCCCGGAGCATGGGCGTTCCATTGTCACATTGAGCCTCATTTGCATATGGGAATGGGAGTCGTCTTTGCGGAAGGCATCCAACACCTCACCAAAATCCCTCAGGAGGCTATTGCATGTGGTCTCACTGGGAAGATGCTTATGACAGCCAACCACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

588

Amino Acids

65.22

Weight (kDa)

8.23

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 44 - 157 8.9e-42 Multicopper oxidase
Cu-oxidase PF00394 171 - 335 1.3e-43 Multicopper oxidase
Cu-oxidase_2 PF07731 440 - 560 1.1e-36 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011474)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G21105 AT5G21105 AT5G21105
fragaria_vesca FvH4_5g29070 FvH4_5g29070 FvH4_5g29070
malus_domestica MD11G1182500.v1.1
prunus_persica Prupe.6G155100_v2.0.a1
pyrus_communis pycom11g15730
rosa_chinensis RchiOBHm_Chr5g0049951
rosa_laevigata RLG00000034669
rosa_multiflora Rmu_sc0000333.1_g000058
rosa_roxburghii Rroxscaffold_1G00031360
rosa_rugosa Rorug05G0254800 Rorug05G0254900
rosa_samantha Rh5AG328800 Rh5BG339400 Rh5CG365400 Rh5DG351800
rosa_wichuraiana Rw5G031060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1057
Acc16I TGCGCA 1 cut(s) 709
Acc36I ACCTGC 1 cut(s) 1057
AccII CGCG 3 cut(s) 655, 1265, 1406
AclI AACGTT 1 cut(s) 1214
AclWI GGATC 4 cut(s) 188, 1151, 1233, 1246
AcoI YGGCCR 4 cut(s) 187, 792, 1368, 1596
AcsI RAATTY 1 cut(s) 1092
AcuI CTGAAG 1 cut(s) 1066
AcyI GRCGYC 1 cut(s) 845
AdeI CACNNNGTG 2 cut(s) 344, 1188
AfaI GTAC 4 cut(s) 449, 635, 1250, 1481
AfiI CCNNNNNNNGG 7 cut(s) 265, 790, 1235, 1347, 1353, 1614, 1708
AflIII ACRYGT 2 cut(s) 17, 1263
AgsI TTSAA 8 cut(s) 105, 121, 382, 675, 1017, 1400, 1525, 1531
AjiI CACGTC 2 cut(s) 130, 1312
AjnI CCWGG 3 cut(s) 110, 196, 355
AjuI GAANNNNNNNTTGG 2 cut(s) 997, 1029
AluBI AGCT 5 cut(s) 221, 827, 888, 1021, 1293
AluI AGCT 5 cut(s) 221, 827, 888, 1021, 1293
Alw26I GTCTC 5 cut(s) 219, 356, 459, 1210, 1730
AlwI GGATC 4 cut(s) 188, 1151, 1233, 1246
ApeKI GCWGC 3 cut(s) 650, 1321, 1543
ApoI RAATTY 1 cut(s) 1092
Asp700I GAANNNNTTC 1 cut(s) 546
AspLEI GCGC 3 cut(s) 655, 657, 710
AspS9I GGNCC 5 cut(s) 37, 200, 628, 1099, 1191
AsuC2I CCSGG 2 cut(s) 1348, 1608
AsuHPI GGTGA 8 cut(s) 141, 542, 608, 1026, 1138, 1496, 1570, 1684
AxyI CCTNAGG 1 cut(s) 1704
BaeGI GKGCMC 2 cut(s) 420, 1461
BalI TGGCCA 3 cut(s) 189, 794, 1370
BamHI GGATCC 1 cut(s) 1238
BanII GRGCYC 1 cut(s) 1112
BbsI GAAGAC 1 cut(s) 17
BbvI GCAGC 3 cut(s) 662, 1333, 1530
BccI CCATC 6 cut(s) 169, 215, 314, 341, 470, 1099
BceAI ACGGC 5 cut(s) 475, 520, 1192, 1569, 1596
BciT130I CCWGG 3 cut(s) 112, 198, 357
BclI TGATCA 1 cut(s) 615
BcnI CCSGG 2 cut(s) 1348, 1608
BcoDI GTCTC 5 cut(s) 219, 356, 459, 1210, 1730
BfaI CTAG 2 cut(s) 669, 776
BfmI CTRYAG 2 cut(s) 658, 745
BfuAI ACCTGC 1 cut(s) 1057
BglII AGATCT 1 cut(s) 741
BisI GCNGC 3 cut(s) 651, 1322, 1544
BlsI GCNGC 3 cut(s) 652, 1323, 1545
Bme1390I CCNGG 5 cut(s) 112, 198, 357, 1348, 1608
BmgBI CACGTC 2 cut(s) 130, 1312
BmgT120I GGNCC 5 cut(s) 37, 200, 628, 1099, 1191
BmiI GGNNCC 5 cut(s) 39, 629, 963, 1111, 1240
BmrFI CCNGG 5 cut(s) 112, 198, 357, 1348, 1608
BmrI ACTGGG 1 cut(s) 1740
BmsI GCATC 6 cut(s) 53, 168, 338, 788, 1689, 1728
BmuI ACTGGG 1 cut(s) 1740
BpiI GAAGAC 1 cut(s) 17
BplI GAGNNNNNCTC 4 cut(s) 875, 907, 1280, 1312
BpmI CTGGAG 2 cut(s) 243, 378
Bpu10I CCTNAGC 1 cut(s) 752
BpuMI CCSGG 2 cut(s) 1348, 1608
BsaBI GATNNNNATC 1 cut(s) 179
BsaHI GRCGYC 1 cut(s) 845
BsaI GGTCTC 3 cut(s) 356, 459, 1730
BsaJI CCNNGG 6 cut(s) 197, 264, 311, 355, 412, 1442
BsaWI WCCGGW 1 cut(s) 151
BsaXI ACNNNNNCTCC 6 cut(s) 125, 155, 216, 246, 1190, 1220
Bsc4I CCNNNNNNNGG 7 cut(s) 265, 790, 1235, 1347, 1353, 1614, 1708
Bse1I ACTGG 8 cut(s) 190, 287, 536, 631, 679, 938, 1371, 1735
Bse21I CCTNAGG 1 cut(s) 1704
Bse3DI GCAATG 2 cut(s) 608, 703
Bse8I GATNNNNATC 1 cut(s) 179
BseBI CCWGG 3 cut(s) 112, 198, 357
BseDI CCNNGG 6 cut(s) 197, 264, 311, 355, 412, 1442
BseGI GGATG 5 cut(s) 44, 207, 329, 779, 1680
BseJI GATNNNNATC 1 cut(s) 179
BseLI CCNNNNNNNGG 7 cut(s) 265, 790, 1235, 1347, 1353, 1614, 1708
BseMI GCAATG 2 cut(s) 608, 703
BseMII CTCAG 5 cut(s) 515, 766, 891, 906, 1718
BseNI ACTGG 8 cut(s) 190, 287, 536, 631, 679, 938, 1371, 1735
BsePI GCGCGC 1 cut(s) 653
BseRI GAGGAG 1 cut(s) 1142
BseSI GKGCMC 2 cut(s) 420, 1461
BseXI GCAGC 3 cut(s) 662, 1333, 1530
BseYI CCCAGC 2 cut(s) 40, 395
Bsh1236I CGCG 3 cut(s) 655, 1265, 1406
Bsh1285I CGRYCG 1 cut(s) 1138
BsiEI CGRYCG 1 cut(s) 1138
BsiSI CCGG 4 cut(s) 152, 1286, 1347, 1608
BslFI GGGAC 3 cut(s) 19, 140, 412
BslI CCNNNNNNNGG 7 cut(s) 265, 790, 1235, 1347, 1353, 1614, 1708
BsmAI GTCTC 5 cut(s) 219, 356, 459, 1210, 1730
BsmFI GGGAC 3 cut(s) 19, 140, 412
BsmI GAATGC 1 cut(s) 432
Bso31I GGTCTC 3 cut(s) 356, 459, 1730
Bsp1286I GDGCHC 3 cut(s) 420, 1112, 1461
Bsp143I GATC 8 cut(s) 180, 241, 434, 615, 741, 1143, 1170, 1238
Bsp19I CCATGG 1 cut(s) 1442
BspCNI CTCAG 5 cut(s) 516, 765, 890, 905, 1717
BspFNI CGCG 3 cut(s) 655, 1265, 1406
BspLI GGNNCC 5 cut(s) 39, 629, 963, 1111, 1240
BspMI ACCTGC 1 cut(s) 1057
BspPI GGATC 4 cut(s) 188, 1151, 1233, 1246
BspTNI GGTCTC 3 cut(s) 356, 459, 1730
BsrDI GCAATG 2 cut(s) 608, 703
BsrI ACTGG 8 cut(s) 190, 287, 536, 631, 679, 938, 1371, 1735
BssECI CCNNGG 6 cut(s) 197, 264, 311, 355, 412, 1442
BssHII GCGCGC 1 cut(s) 653
BssMI GATC 8 cut(s) 180, 241, 434, 615, 741, 1143, 1170, 1238
BssNI GRCGYC 1 cut(s) 845
BssT1I CCWWGG 2 cut(s) 311, 1442
Bst2UI CCWGG 3 cut(s) 112, 198, 357
Bst4CI ACNGT 7 cut(s) 232, 300, 641, 1139, 1253, 1384, 1484
Bst6I CTCTTC 1 cut(s) 577
BstACI GRCGYC 1 cut(s) 845
BstC8I GCNNGC 5 cut(s) 67, 655, 763, 1263, 1283
BstDEI CTNAG 6 cut(s) 524, 752, 877, 892, 1586, 1704
BstDSI CCRYGG 2 cut(s) 412, 1442
BstEII GGTNACC 1 cut(s) 147
BstF5I GGATG 5 cut(s) 44, 207, 329, 779, 1680
BstFNI CGCG 3 cut(s) 655, 1265, 1406
BstHHI GCGC 3 cut(s) 655, 657, 710
BstKTI GATC 8 cut(s) 183, 244, 437, 618, 744, 1146, 1173, 1241
BstMAI GTCTC 5 cut(s) 219, 356, 459, 1210, 1730
BstMBI GATC 8 cut(s) 180, 241, 434, 615, 741, 1143, 1170, 1238
BstMCI CGRYCG 1 cut(s) 1138
BstMWI GCNNNNNNNGC 3 cut(s) 705, 1418, 1645
BstNI CCWGG 3 cut(s) 112, 198, 357
BstNSI RCATGY 2 cut(s) 21, 1722
BstPI GGTNACC 1 cut(s) 147
BstSCI CCNGG 5 cut(s) 110, 196, 355, 1346, 1606
BstSFI CTRYAG 2 cut(s) 658, 745
BstSLI GKGCMC 2 cut(s) 420, 1461
BstUI CGCG 3 cut(s) 655, 1265, 1406
BstV1I GCAGC 3 cut(s) 662, 1333, 1530
BstV2I GAAGAC 1 cut(s) 17
BstX2I RGATCY 2 cut(s) 741, 1238
BstXI CCANNNNNNTGG 1 cut(s) 563
BstYI RGATCY 2 cut(s) 741, 1238
Bsu36I CCTNAGG 1 cut(s) 1704
BtgI CCRYGG 2 cut(s) 412, 1442
BtrI CACGTC 2 cut(s) 130, 1312
BtsCI GGATG 5 cut(s) 44, 207, 329, 779, 1680
BtsI GCAGTG 1 cut(s) 768
BtsIMutI CAGTG 6 cut(s) 237, 280, 686, 768, 1412, 1728
BveI ACCTGC 1 cut(s) 1057
Cac8I GCNNGC 5 cut(s) 67, 655, 763, 1263, 1283
CfoI GCGC 3 cut(s) 655, 657, 710
Cfr13I GGNCC 5 cut(s) 37, 200, 628, 1099, 1191
CseI GACGC 1 cut(s) 853
Csp6I GTAC 4 cut(s) 448, 634, 1249, 1480
CviQI GTAC 4 cut(s) 448, 634, 1249, 1480
DdeI CTNAG 6 cut(s) 524, 752, 877, 892, 1586, 1704
DpnI GATC 8 cut(s) 182, 243, 436, 617, 743, 1145, 1172, 1240
DpnII GATC 8 cut(s) 180, 241, 434, 615, 741, 1143, 1170, 1238
DraIII CACNNNGTG 2 cut(s) 344, 1188
EaeI YGGCCR 4 cut(s) 187, 792, 1368, 1596
Eam1104I CTCTTC 1 cut(s) 577
EarI CTCTTC 1 cut(s) 577
Eco130I CCWWGG 2 cut(s) 311, 1442
Eco24I GRGCYC 1 cut(s) 1112
Eco31I GGTCTC 3 cut(s) 356, 459, 1730
Eco32I GATATC 1 cut(s) 1390
Eco57I CTGAAG 1 cut(s) 1066
Eco81I CCTNAGG 1 cut(s) 1704
Eco91I GGTNACC 1 cut(s) 147
EcoO109I RGGNCCY 1 cut(s) 37
EcoO65I GGTNACC 1 cut(s) 147
EcoRII CCWGG 3 cut(s) 110, 196, 355
EcoRV GATATC 1 cut(s) 1390
EcoT14I CCWWGG 2 cut(s) 311, 1442
EcoT38I GRGCYC 1 cut(s) 1112
ErhI CCWWGG 2 cut(s) 311, 1442
FaqI GGGAC 3 cut(s) 19, 140, 412
FauI CCCGC 4 cut(s) 91, 981, 1033, 1290
FauNDI CATATG 1 cut(s) 1650
FbaI TGATCA 1 cut(s) 615
Fnu4HI GCNGC 3 cut(s) 651, 1322, 1544
FokI GGATG 5 cut(s) 31, 194, 316, 766, 1667
FriOI GRGCYC 1 cut(s) 1112
Fsp4HI GCNGC 3 cut(s) 651, 1322, 1544
FspBI CTAG 2 cut(s) 669, 776
FspI TGCGCA 1 cut(s) 709
GlaI GCGC 3 cut(s) 654, 656, 709
GluI GCNGC 3 cut(s) 651, 1322, 1544
GsaI CCCAGC 2 cut(s) 44, 399
GsuI CTGGAG 2 cut(s) 243, 378
HapII CCGG 4 cut(s) 152, 1286, 1347, 1608
HgaI GACGC 1 cut(s) 853
HhaI GCGC 3 cut(s) 655, 657, 710
Hin1I GRCGYC 1 cut(s) 845
Hin6I GCGC 3 cut(s) 653, 655, 708
HinP1I GCGC 3 cut(s) 653, 655, 708
HincII GTYRAC 2 cut(s) 388, 1330
HindII GTYRAC 2 cut(s) 388, 1330
HinfI GANTC 5 cut(s) 89, 291, 802, 1534, 1662
HpaII CCGG 4 cut(s) 152, 1286, 1347, 1608
HphI GGTGA 8 cut(s) 141, 542, 608, 1026, 1138, 1496, 1570, 1684
Hpy166II GTNNAC 6 cut(s) 388, 466, 550, 599, 1330, 1578
Hpy188I TCNGA 3 cut(s) 212, 296, 1143
Hpy188III TCNNGA 2 cut(s) 754, 1706
Hpy8I GTNNAC 6 cut(s) 388, 466, 550, 599, 1330, 1578
Hpy99I CGWCG 3 cut(s) 506, 1143, 1313
HpyAV CCTTC 6 cut(s) 376, 930, 951, 1090, 1481, 1670
HpyCH4III ACNGT 7 cut(s) 232, 300, 641, 1139, 1253, 1384, 1484
HpyCH4IV ACGT 5 cut(s) 129, 468, 1214, 1311, 1425
HpyCH4V TGCA 7 cut(s) 69, 159, 430, 1052, 1453, 1648, 1718
HpyF10VI GCNNNNNNNGC 3 cut(s) 705, 1418, 1645
HpyF3I CTNAG 6 cut(s) 524, 752, 877, 892, 1586, 1704
HpySE526I ACGT 5 cut(s) 129, 468, 1214, 1311, 1425
Hsp92I GRCGYC 1 cut(s) 845
HspAI GCGC 3 cut(s) 653, 655, 708
Ksp22I TGATCA 1 cut(s) 615
Kzo9I GATC 8 cut(s) 180, 241, 434, 615, 741, 1143, 1170, 1238
LmnI GCTCC 3 cut(s) 1026, 1115, 1610
Lsp1109I GCAGC 3 cut(s) 662, 1333, 1530
LweI GCATC 6 cut(s) 53, 168, 338, 788, 1689, 1728
MaeI CTAG 2 cut(s) 669, 776
MaeII ACGT 5 cut(s) 129, 468, 1214, 1311, 1425
MaeIII GTNAC 5 cut(s) 147, 841, 1032, 1215, 1628
MalI GATC 8 cut(s) 182, 243, 436, 617, 743, 1145, 1172, 1240
MboI GATC 8 cut(s) 180, 241, 434, 615, 741, 1143, 1170, 1238
MboII GAAGA 6 cut(s) 22, 485, 564, 1528, 1543, 1747
MflI RGATCY 2 cut(s) 741, 1238
MhlI GDGCHC 3 cut(s) 420, 1112, 1461
MlsI TGGCCA 3 cut(s) 189, 794, 1370
MluCI AATT 7 cut(s) 664, 686, 835, 1092, 1129, 1520, 1759
MluI ACGCGT 1 cut(s) 1263
MluNI TGGCCA 3 cut(s) 189, 794, 1370
MlyI GAGTC 2 cut(s) 98, 1671
MmeI TCCRAC 6 cut(s) 569, 600, 948, 1121, 1323, 1708
Mox20I TGGCCA 3 cut(s) 189, 794, 1370
MroXI GAANNNNTTC 1 cut(s) 546
MscI TGGCCA 3 cut(s) 189, 794, 1370
MseI TTAA 7 cut(s) 33, 513, 689, 1197, 1245, 1256, 1762
MslI CAYNNNNRTG 4 cut(s) 74, 285, 1051, 1452
Msp20I TGGCCA 3 cut(s) 189, 794, 1370
MspA1I CMGCKG 1 cut(s) 1543
MspI CCGG 4 cut(s) 152, 1286, 1347, 1608
MspR9I CCNGG 5 cut(s) 112, 198, 357, 1348, 1608
Mva1269I GAATGC 1 cut(s) 432
MvaI CCWGG 3 cut(s) 112, 198, 357
MvnI CGCG 3 cut(s) 655, 1265, 1406
MwoI GCNNNNNNNGC 3 cut(s) 705, 1418, 1645
NciI CCSGG 2 cut(s) 1348, 1608
NcoI CCATGG 1 cut(s) 1442
NdeI CATATG 1 cut(s) 1650
NdeII GATC 8 cut(s) 180, 241, 434, 615, 741, 1143, 1170, 1238
NlaIV GGNNCC 5 cut(s) 39, 629, 963, 1111, 1240
NmuCI GTSAC 4 cut(s) 147, 841, 1032, 1628
NsbI TGCGCA 1 cut(s) 709
NspI RCATGY 2 cut(s) 21, 1722
PaqCI CACCTGC 1 cut(s) 1057
PauI GCGCGC 1 cut(s) 653
PciI ACATGT 1 cut(s) 17
PcsI WCGNNNNNNNCGW 1 cut(s) 1308
PctI GAATGC 1 cut(s) 432
PdmI GAANNNNTTC 1 cut(s) 546
PfeI GAWTC 3 cut(s) 291, 802, 1534
PfoI TCCNGGA 1 cut(s) 1606
PkrI GCNGC 3 cut(s) 652, 1323, 1545
PleI GAGTC 2 cut(s) 97, 1670
PpsI GAGTC 2 cut(s) 97, 1670
PscI ACATGT 1 cut(s) 17
Psp1406I AACGTT 1 cut(s) 1214
Psp6I CCWGG 3 cut(s) 110, 196, 355
PspEI GGTNACC 1 cut(s) 147
PspFI CCCAGC 2 cut(s) 40, 395
PspGI CCWGG 3 cut(s) 110, 196, 355
PspN4I GGNNCC 5 cut(s) 39, 629, 963, 1111, 1240
PspPI GGNCC 5 cut(s) 37, 200, 628, 1099, 1191
PsrI GAACNNNNNNTAC 2 cut(s) 1343, 1375
PsuI RGATCY 2 cut(s) 741, 1238
PteI GCGCGC 1 cut(s) 653
RsaI GTAC 4 cut(s) 449, 635, 1250, 1481
RsaNI GTAC 4 cut(s) 448, 634, 1249, 1480
RseI CAYNNNNRTG 4 cut(s) 74, 285, 1051, 1452
SaqAI TTAA 7 cut(s) 33, 513, 689, 1197, 1245, 1256, 1762
SatI GCNGC 3 cut(s) 651, 1322, 1544
Sau3AI GATC 8 cut(s) 180, 241, 434, 615, 741, 1143, 1170, 1238
Sau96I GGNCC 5 cut(s) 37, 200, 628, 1099, 1191
SchI GAGTC 2 cut(s) 98, 1671
ScrFI CCNGG 5 cut(s) 112, 198, 357, 1348, 1608
SduI GDGCHC 3 cut(s) 420, 1112, 1461
SfaNI GCATC 6 cut(s) 53, 168, 338, 788, 1689, 1728
SfcI CTRYAG 2 cut(s) 658, 745
SmiMI CAYNNNNRTG 4 cut(s) 74, 285, 1051, 1452
Sse9I AATT 7 cut(s) 664, 686, 835, 1092, 1129, 1520, 1759
SspMI CTAG 2 cut(s) 669, 776
StyD4I CCNGG 5 cut(s) 110, 196, 355, 1346, 1606
StyI CCWWGG 2 cut(s) 311, 1442
TaaI ACNGT 7 cut(s) 232, 300, 641, 1139, 1253, 1384, 1484
TaiI ACGT 5 cut(s) 132, 471, 1217, 1314, 1428
TaqI TCGA 2 cut(s) 162, 1386
TasI AATT 7 cut(s) 664, 686, 835, 1092, 1129, 1520, 1759
TatI WGTACW 1 cut(s) 633
TfiI GAWTC 3 cut(s) 291, 802, 1534
Tru1I TTAA 7 cut(s) 33, 513, 689, 1197, 1245, 1256, 1762
Tru9I TTAA 7 cut(s) 33, 513, 689, 1197, 1245, 1256, 1762
TscAI CASTG 6 cut(s) 237, 287, 686, 775, 1419, 1735
TseFI GTSAC 4 cut(s) 147, 841, 1032, 1628
TseI GCWGC 3 cut(s) 650, 1321, 1543
Tsp45I GTSAC 4 cut(s) 147, 841, 1032, 1628
TspDTI ATGAA 3 cut(s) 555, 1331, 1388
TspGWI ACGGA 3 cut(s) 438, 575, 846
TspRI CASTG 6 cut(s) 237, 287, 686, 775, 1419, 1735
XapI RAATTY 1 cut(s) 1092
XceI RCATGY 2 cut(s) 21, 1722
XcmI CCANNNNNNNNNTGG 2 cut(s) 560, 1231
XmnI GAANNNNTTC 1 cut(s) 546
XspI CTAG 2 cut(s) 669, 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.