MD11G1188100.v1.1

Belongs to the hexokinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0018755
Physical Location & Seq
Reverse (-)
26464123 .. 26470234
6112 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1188100.v1.1.491

Sequence Viewer

Length: 1527 bp
ATGGGGAAGGTGGCGGTCGGATTGGCGGTTGGGGTGGCGGTGGCGGCGTGTGCGGTAGCGACGGTGGTGGTGGGTCGGAGGATAAGGTGCAGAAGGAAGTGGAGCAGAGTGGTTGGTGTTTTGAAGGACCTCGAGCATAGCTGTGAAACCACAGTGGGGAGGTTGAGGCAGGTGGTGGACGCCATGGCGGTGGAGATGCACGCCGGTTTGGCCTCTGACGGTGGTTCCAAGCTCAAAATGCTGCTCACTTTTGTGGATAAACTACCCAATGGGACTGAGAAGGGAACTTATTATGCACTAGATCTTGGCGGTACTAACTTTAGGGTCTTGCGGGTTAAGCTTGGAGGTACGAGGTCCTCTACCTTGGAACATGATGTGTATCGACAAGCCATTCCTCAAGATTTGATGACTGGGACAAGTGAGGATCTATTTGATTTTATTGCTTCATCATTGAAGGAGTTTGTTGAAAGAGAGAGAGATGTTTCTAAGCTTTCACTGGACAGAAGAAGGGAGCTTGGATTTACGTTCTCTTTTCCTGTGAAACAAATTTCTGTTTCATCAGGCACTTTATTAAAATGGACAAAAGGGTTTGCGATTGAAGACATGGTTGGAAGAGAGATTGCGGGATGCTTGGAGAAAGCAATGACCAGGAAGGGTCTGAATATGAGGGTGGCAGCACTTGTCAATGACAGTGTGGGAACATTATCACTTGGACATTATCACGATACAGACACTGTTGCTGCAGTAATAATTGGAACCGGTACTAATGCCTGTTATTTGGAAAGGATAGATGCTATAATTAAGTCTCAAGGGCTCCTTACAGCATCTGGAAGCATGGTTGTCAACATGGAATGGGGAAATTTTTGGTCTTCTCATTTACCAAGAACTGTATATGATATTGAATTAGATGCTGATAGCCCTAATCCAAATGATCAGGGTTTTGAAAAATTGATATCGGGAATGTACCTGGGCGATGTTGTGAGAAGAGTGATTGTCAGAATGTCACAGGAGTCGGATATTTTTGAGCCTATATCTTCCAAGTTATCTATGCCTTTCATTTTGAGGACACCATTGATTGCTGCAATGCATGAGGATGACACTCCTGACTTGGAGGAAGTAGGAAGCATTTTAAGAGATAACCTGGAGATTCCTGATGTCCCTCTAAAAGTCCGAAAGCTCATAGTCAAGGTGTGTGACGTTGTGACTCGCAGGGCTGCTCGATTGGCAGCTGCTGGTATTGTAGGGATCTTGAAGAAAATTGGTCGCGATGGGAGTGGTGGAATCACCGGTGGAAGAAGTAGAAGTGATCACAGAATGAGAAGAACGGTTGTGGCGATGGAGGGGGGTTTGTATACAGGCTACACAATGTTTAGAGAGTACTTACATGAAGCATTGACGGAAATATTAGGCGAAGATATTGCCCAGCATGTCGTACTCAAGGTTACTGAAGACGGATCAGCCATGGGAGCAGCCCTCCTGGCTGCTGCATATTCATCCTACCCTTTGGATAGCGTACAGTTGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001678 GO:0003674 GO:0003824 GO:0004340 GO:0004396 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005829 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008865 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009266 GO:0009409 GO:0009536 GO:0009628 GO:0009651 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016020 GO:0016021 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019158 GO:0019200 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019725 GO:0019752 GO:0019867 GO:0021700 GO:0022622 GO:0030154 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032501 GO:0032502 GO:0032592 GO:0032787 GO:0033500 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042592 GO:0042593 GO:0042866 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044262 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046835 GO:0046939 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0048878 GO:0050896 GO:0051156 GO:0051186 GO:0051188 GO:0055082 GO:0055086 GO:0065007 GO:0065008 GO:0071695 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0080147 GO:0090407 GO:0090558 GO:0090627 GO:0098573 GO:0098588 GO:0098805 GO:0099402 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1905392
KEGG Pathways
Metabolic & Signaling
ko00010 ko00051 ko00052 ko00500 ko00520 ko00521 ko00524 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04910 ko04930 ko04973 ko05230 map00010 map00051 map00052 map00500 map00520 map00521 map00524 map01100 map01110 map01120 map01130 map01200 map04066 map04910 map04930 map04973 map05230
Pfam Domains
Protein Families
Hexokinase_1 Hexokinase_2

Protein Analysis

509

Amino Acids

55.43

Weight (kDa)

7.15

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hexokinase_1 PF00349 41 - 240 1.5e-70 Hexokinase
Hexokinase_2 PF03727 247 - 495 1.3e-77 Hexokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018755)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G50460 AT1G50460 AT1G50460
malus_domestica MD03G1170700.v1.1 MD11G1188100.v1.1
prunus_persica Prupe.4G256200_v2.0.a1 Prupe.4G256200_v2.0.a1
pyrus_communis pycom03g12760 pycom11g16500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 160
Acc36I ACCTGC 1 cut(s) 160
AccI GTMKAC 1 cut(s) 1352
AccII CGCG 1 cut(s) 1266
AciI CCGC 9 cut(s) 14, 26, 38, 44, 53, 188, 309, 331, 623
AclWI GGATC 3 cut(s) 432, 1253, 1462
AcsI RAATTY 2 cut(s) 546, 859
AcuI CTGAAG 1 cut(s) 1467
AcyI GRCGYC 1 cut(s) 180
AfaI GTAC 7 cut(s) 313, 349, 763, 965, 1379, 1434, 1515
AfiI CCNNNNNNNGG 1 cut(s) 156
AgeI ACCGGT 2 cut(s) 758, 1286
AgsI TTSAA 7 cut(s) 124, 454, 467, 599, 902, 944, 1252
AjnI CCWGG 4 cut(s) 647, 966, 1140, 1476
AjuI GAANNNNNNNTTGG 2 cut(s) 591, 623
AleI CACNNNNGTG 1 cut(s) 251
AluBI AGCT 7 cut(s) 141, 232, 340, 490, 514, 1177, 1229
AluI AGCT 7 cut(s) 141, 232, 340, 490, 514, 1177, 1229
Alw26I GTCTC 1 cut(s) 810
AlwI GGATC 3 cut(s) 432, 1253, 1462
AlwNI CAGNNNCTG 3 cut(s) 734, 827, 1232
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 1 cut(s) 210
ApoI RAATTY 2 cut(s) 546, 859
AsiGI ACCGGT 2 cut(s) 758, 1286
AspS9I GGNCC 2 cut(s) 127, 354
AsuHPI GGTGA 1 cut(s) 1276
AvaI CYCGRG 1 cut(s) 131
AvaII GGWCC 2 cut(s) 127, 354
BanII GRGCYC 1 cut(s) 816
BbsI GAAGAC 3 cut(s) 606, 861, 1455
BccI CCATC 2 cut(s) 1262, 1330
BcgI CGANNNNNNTGC 2 cut(s) 1400, 1434
BciT130I CCWGG 4 cut(s) 649, 968, 1142, 1478
BclI TGATCA 2 cut(s) 931, 1306
BcoDI GTCTC 1 cut(s) 810
BfaI CTAG 1 cut(s) 299
BfmI CTRYAG 1 cut(s) 741
BfuAI ACCTGC 1 cut(s) 160
BglI GCCNNNNNGGC 2 cut(s) 209, 1478
BglII AGATCT 1 cut(s) 301
BmcAI AGTACT 1 cut(s) 1379
Bme1390I CCNGG 4 cut(s) 649, 968, 1142, 1478
Bme18I GGWCC 2 cut(s) 127, 354
BmeT110I CYCGRG 1 cut(s) 131
BmgT120I GGNCC 2 cut(s) 127, 354
BmiI GGNNCC 3 cut(s) 226, 757, 815
BmrFI CCNGG 4 cut(s) 649, 968, 1142, 1478
BmrI ACTGGG 1 cut(s) 420
BmsI GCATC 5 cut(s) 186, 617, 781, 833, 898
BmuI ACTGGG 1 cut(s) 420
BpiI GAAGAC 3 cut(s) 606, 861, 1455
BplI GAGNNNNNCTC 2 cut(s) 1458, 1490
BpmI CTGGAG 1 cut(s) 1163
BpuEI CTTGAG 3 cut(s) 381, 792, 1421
BsaBI GATNNNNATC 1 cut(s) 378
BsaHI GRCGYC 1 cut(s) 180
BsaJI CCNNGG 4 cut(s) 183, 363, 967, 1461
BsaWI WCCGGW 2 cut(s) 758, 1286
Bsc4I CCNNNNNNNGG 1 cut(s) 156
Bse118I RCCGGY 3 cut(s) 203, 758, 1286
Bse1I ACTGG 2 cut(s) 415, 501
Bse3DI GCAATG 2 cut(s) 648, 1089
Bse8I GATNNNNATC 1 cut(s) 378
BseBI CCWGG 4 cut(s) 649, 968, 1142, 1478
BseDI CCNNGG 4 cut(s) 183, 363, 967, 1461
BseGI GGATG 3 cut(s) 632, 1099, 1493
BseJI GATNNNNATC 1 cut(s) 378
BseLI CCNNNNNNNGG 1 cut(s) 156
BseMI GCAATG 2 cut(s) 648, 1089
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 2 cut(s) 415, 501
BseYI CCCAGC 1 cut(s) 1422
BsgI GTGCAG 1 cut(s) 109
Bsh1236I CGCG 1 cut(s) 1266
Bsh1285I CGRYCG 1 cut(s) 18
BshFI GGCC 1 cut(s) 212
BshTI ACCGGT 2 cut(s) 758, 1286
BsiEI CGRYCG 1 cut(s) 18
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 3 cut(s) 204, 759, 1287
BslFI GGGAC 3 cut(s) 286, 427, 1142
BslI CCNNNNNNNGG 1 cut(s) 156
BsmAI GTCTC 1 cut(s) 810
BsmFI GGGAC 3 cut(s) 286, 427, 1142
BsnI GGCC 1 cut(s) 212
BsoBI CYCGRG 1 cut(s) 131
Bsp1286I GDGCHC 1 cut(s) 816
Bsp143I GATC 6 cut(s) 301, 424, 931, 1245, 1306, 1454
Bsp19I CCATGG 2 cut(s) 183, 1461
Bsp68I TCGCGA 1 cut(s) 1266
BspACI CCGC 9 cut(s) 14, 26, 38, 44, 53, 188, 309, 331, 623
BspANI GGCC 1 cut(s) 212
BspCNI CTCAG 1 cut(s) 268
BspFNI CGCG 1 cut(s) 1266
BspLI GGNNCC 3 cut(s) 226, 757, 815
BspMAI CTGCAG 1 cut(s) 745
BspMI ACCTGC 1 cut(s) 160
BspPI GGATC 3 cut(s) 432, 1253, 1462
BsrDI GCAATG 2 cut(s) 648, 1089
BsrFI RCCGGY 3 cut(s) 203, 758, 1286
BsrI ACTGG 2 cut(s) 415, 501
BssAI RCCGGY 3 cut(s) 203, 758, 1286
BssECI CCNNGG 4 cut(s) 183, 363, 967, 1461
BssMI GATC 6 cut(s) 301, 424, 931, 1245, 1306, 1454
BssNAI GTATAC 1 cut(s) 1353
BssNI GRCGYC 1 cut(s) 180
BssT1I CCWWGG 3 cut(s) 183, 363, 1461
Bst1107I GTATAC 1 cut(s) 1353
Bst2UI CCWGG 4 cut(s) 649, 968, 1142, 1478
Bst4CI ACNGT 8 cut(s) 64, 154, 221, 692, 736, 889, 1327, 1518
Bst6I CTCTTC 2 cut(s) 607, 979
BstACI GRCGYC 1 cut(s) 180
BstC8I GCNNGC 1 cut(s) 201
BstDEI CTNAG 2 cut(s) 276, 486
BstDSI CCRYGG 2 cut(s) 183, 1461
BstF5I GGATG 3 cut(s) 632, 1099, 1493
BstFNI CGCG 1 cut(s) 1266
BstKTI GATC 6 cut(s) 304, 427, 934, 1248, 1309, 1457
BstMAI GTCTC 1 cut(s) 810
BstMBI GATC 6 cut(s) 301, 424, 931, 1245, 1306, 1454
BstMCI CGRYCG 1 cut(s) 18
BstMWI GCNNNNNNNGC 8 cut(s) 44, 50, 209, 238, 337, 1223, 1466, 1478
BstNI CCWGG 4 cut(s) 649, 968, 1142, 1478
BstNSI RCATGY 1 cut(s) 1430
BstSCI CCNGG 4 cut(s) 647, 966, 1140, 1476
BstSFI CTRYAG 1 cut(s) 741
BstUI CGCG 1 cut(s) 1266
BstV2I GAAGAC 3 cut(s) 606, 861, 1455
BstX2I RGATCY 3 cut(s) 301, 424, 1245
BstXI CCANNNNNNTGG 1 cut(s) 190
BstYI RGATCY 3 cut(s) 301, 424, 1245
BstZ17I GTATAC 1 cut(s) 1353
BsuRI GGCC 1 cut(s) 212
BtgI CCRYGG 2 cut(s) 183, 1461
BtgZI GCGATG 3 cut(s) 987, 1281, 1349
BtsCI GGATG 3 cut(s) 632, 1099, 1493
BtsIMutI CAGTG 4 cut(s) 159, 494, 697, 732
BtuMI TCGCGA 1 cut(s) 1266
BveI ACCTGC 1 cut(s) 160
Cac8I GCNNGC 1 cut(s) 201
CaiI CAGNNNCTG 3 cut(s) 734, 827, 1232
Cfr10I RCCGGY 3 cut(s) 203, 758, 1286
Cfr13I GGNCC 2 cut(s) 127, 354
CseI GACGC 1 cut(s) 188
Csp6I GTAC 7 cut(s) 312, 348, 762, 964, 1378, 1433, 1514
CspAI ACCGGT 2 cut(s) 758, 1286
CviAII CATG 9 cut(s) 184, 371, 604, 835, 847, 1088, 1385, 1427, 1462
CviQI GTAC 7 cut(s) 312, 348, 762, 964, 1378, 1433, 1514
DdeI CTNAG 2 cut(s) 276, 486
DpnI GATC 6 cut(s) 303, 426, 933, 1247, 1308, 1456
DpnII GATC 6 cut(s) 301, 424, 931, 1245, 1306, 1454
Eam1104I CTCTTC 2 cut(s) 607, 979
EarI CTCTTC 2 cut(s) 607, 979
Eco130I CCWWGG 3 cut(s) 183, 363, 1461
Eco24I GRGCYC 1 cut(s) 816
Eco32I GATATC 1 cut(s) 954
Eco47I GGWCC 2 cut(s) 127, 354
Eco57I CTGAAG 1 cut(s) 1467
Eco88I CYCGRG 1 cut(s) 131
EcoO109I RGGNCCY 2 cut(s) 127, 354
EcoRII CCWGG 4 cut(s) 647, 966, 1140, 1476
EcoRV GATATC 1 cut(s) 954
EcoT14I CCWWGG 3 cut(s) 183, 363, 1461
EcoT22I ATGCAT 1 cut(s) 1089
EcoT38I GRGCYC 1 cut(s) 816
ErhI CCWWGG 3 cut(s) 183, 363, 1461
FaeI CATG 9 cut(s) 187, 374, 607, 838, 850, 1091, 1388, 1430, 1465
FalI AAGNNNNNCTT 2 cut(s) 801, 833
FaqI GGGAC 3 cut(s) 286, 427, 1142
FatI CATG 9 cut(s) 183, 370, 603, 834, 846, 1087, 1384, 1426, 1461
FauI CCCGC 2 cut(s) 324, 616
FbaI TGATCA 2 cut(s) 931, 1306
FblI GTMKAC 1 cut(s) 1352
FokI GGATG 3 cut(s) 639, 1106, 1480
FriOI GRGCYC 1 cut(s) 816
FspBI CTAG 1 cut(s) 299
GsaI CCCAGC 1 cut(s) 1426
GsuI CTGGAG 1 cut(s) 1163
HaeIII GGCC 1 cut(s) 212
HapII CCGG 3 cut(s) 204, 759, 1287
HgaI GACGC 1 cut(s) 188
Hin1I GRCGYC 1 cut(s) 180
Hin1II CATG 9 cut(s) 187, 374, 607, 838, 850, 1091, 1388, 1430, 1465
HincII GTYRAC 1 cut(s) 844
HindII GTYRAC 1 cut(s) 844
HindIII AAGCTT 2 cut(s) 338, 488
HinfI GANTC 4 cut(s) 1010, 1147, 1204, 1281
HpaII CCGG 3 cut(s) 204, 759, 1287
HphI GGTGA 1 cut(s) 1276
Hpy166II GTNNAC 3 cut(s) 178, 844, 1353
Hpy188I TCNGA 7 cut(s) 20, 78, 217, 660, 998, 1015, 1172
Hpy188III TCNNGA 8 cut(s) 398, 722, 828, 957, 1103, 1151, 1249, 1265
Hpy8I GTNNAC 3 cut(s) 178, 844, 1353
Hpy99I CGWCG 1 cut(s) 64
HpyAV CCTTC 6 cut(s) 87, 118, 274, 448, 501, 646
HpyCH4III ACNGT 8 cut(s) 64, 154, 221, 692, 736, 889, 1327, 1518
HpyCH4IV ACGT 2 cut(s) 524, 1197
HpyCH4V TGCA 8 cut(s) 90, 199, 296, 743, 1082, 1087, 1487, 1522
HpyF10VI GCNNNNNNNGC 8 cut(s) 44, 50, 209, 238, 337, 1223, 1466, 1478
HpyF3I CTNAG 2 cut(s) 276, 486
HpySE526I ACGT 2 cut(s) 524, 1197
Hsp92I GRCGYC 1 cut(s) 180
Hsp92II CATG 9 cut(s) 187, 374, 607, 838, 850, 1091, 1388, 1430, 1465
Ksp22I TGATCA 2 cut(s) 931, 1306
Kzo9I GATC 6 cut(s) 301, 424, 931, 1245, 1306, 1454
LmnI GCTCC 4 cut(s) 102, 511, 819, 1466
LweI GCATC 5 cut(s) 186, 617, 781, 833, 898
MaeI CTAG 1 cut(s) 299
MaeII ACGT 2 cut(s) 524, 1197
MaeIII GTNAC 4 cut(s) 1002, 1193, 1201, 1441
MalI GATC 6 cut(s) 303, 426, 933, 1247, 1308, 1456
MboI GATC 6 cut(s) 301, 424, 931, 1245, 1306, 1454
MflI RGATCY 3 cut(s) 301, 424, 1245
MhlI GDGCHC 1 cut(s) 816
MluCI AATT 7 cut(s) 546, 750, 798, 859, 902, 947, 1257
MlyI GAGTC 2 cut(s) 1019, 1198
MmeI TCCRAC 3 cut(s) 56, 589, 993
Mph1103I ATGCAT 1 cut(s) 1089
MseI TTAA 4 cut(s) 336, 572, 801, 1130
MslI CAYNNNNRTG 4 cut(s) 141, 188, 251, 1092
MspA1I CMGCKG 1 cut(s) 1229
MspI CCGG 3 cut(s) 204, 759, 1287
MspR9I CCNGG 4 cut(s) 649, 968, 1142, 1478
MvaI CCWGG 4 cut(s) 649, 968, 1142, 1478
MvnI CGCG 1 cut(s) 1266
MwoI GCNNNNNNNGC 8 cut(s) 44, 50, 209, 238, 337, 1223, 1466, 1478
NcoI CCATGG 2 cut(s) 183, 1461
NdeII GATC 6 cut(s) 301, 424, 931, 1245, 1306, 1454
NlaIII CATG 9 cut(s) 187, 374, 607, 838, 850, 1091, 1388, 1430, 1465
NlaIV GGNNCC 3 cut(s) 226, 757, 815
NmuCI GTSAC 3 cut(s) 1002, 1193, 1201
NruI TCGCGA 1 cut(s) 1266
NsiI ATGCAT 1 cut(s) 1089
NspI RCATGY 1 cut(s) 1430
OliI CACNNNNGTG 1 cut(s) 251
PaeR7I CTCGAG 1 cut(s) 131
PaqCI CACCTGC 1 cut(s) 160
PcsI WCGNNNNNNNCGW 1 cut(s) 1331
PfeI GAWTC 2 cut(s) 1147, 1281
PinAI ACCGGT 2 cut(s) 758, 1286
PleI GAGTC 2 cut(s) 1018, 1198
PpsI GAGTC 2 cut(s) 1018, 1198
PpuMI RGGWCCY 2 cut(s) 127, 354
Psp5II RGGWCCY 2 cut(s) 127, 354
Psp6I CCWGG 4 cut(s) 647, 966, 1140, 1476
PspFI CCCAGC 1 cut(s) 1422
PspGI CCWGG 4 cut(s) 647, 966, 1140, 1476
PspN4I GGNNCC 3 cut(s) 226, 757, 815
PspPI GGNCC 2 cut(s) 127, 354
PspPPI RGGWCCY 2 cut(s) 127, 354
PspXI VCTCGAGB 1 cut(s) 131
PstI CTGCAG 1 cut(s) 745
PstNI CAGNNNCTG 3 cut(s) 734, 827, 1232
PsuI RGATCY 3 cut(s) 301, 424, 1245
PvuII CAGCTG 1 cut(s) 1229
RruI TCGCGA 1 cut(s) 1266
RsaI GTAC 7 cut(s) 313, 349, 763, 965, 1379, 1434, 1515
RsaNI GTAC 7 cut(s) 312, 348, 762, 964, 1378, 1433, 1514
RseI CAYNNNNRTG 4 cut(s) 141, 188, 251, 1092
SaqAI TTAA 4 cut(s) 336, 572, 801, 1130
Sau3AI GATC 6 cut(s) 301, 424, 931, 1245, 1306, 1454
Sau96I GGNCC 2 cut(s) 127, 354
ScaI AGTACT 1 cut(s) 1379
SchI GAGTC 2 cut(s) 1019, 1198
ScrFI CCNGG 4 cut(s) 649, 968, 1142, 1478
SduI GDGCHC 1 cut(s) 816
SfaNI GCATC 5 cut(s) 186, 617, 781, 833, 898
SfcI CTRYAG 1 cut(s) 741
Sfr274I CTCGAG 1 cut(s) 131
SgrAI CRCCGGYG 1 cut(s) 1286
SinI GGWCC 2 cut(s) 127, 354
SlaI CTCGAG 1 cut(s) 131
SmiMI CAYNNNNRTG 4 cut(s) 141, 188, 251, 1092
SmlI CTYRAG 4 cut(s) 131, 396, 807, 1436
SmoI CTYRAG 4 cut(s) 131, 396, 807, 1436
Sse9I AATT 7 cut(s) 546, 750, 798, 859, 902, 947, 1257
SsiI CCGC 9 cut(s) 14, 26, 38, 44, 53, 188, 309, 331, 623
SspI AATATT 1 cut(s) 1404
SspMI CTAG 1 cut(s) 299
StyD4I CCNGG 4 cut(s) 647, 966, 1140, 1476
StyI CCWWGG 3 cut(s) 183, 363, 1461
TaaI ACNGT 8 cut(s) 64, 154, 221, 692, 736, 889, 1327, 1518
TaiI ACGT 2 cut(s) 527, 1200
TaqI TCGA 3 cut(s) 132, 382, 1219
TasI AATT 7 cut(s) 546, 750, 798, 859, 902, 947, 1257
TatI WGTACW 1 cut(s) 1377
TauI GCSGC 1 cut(s) 47
TfiI GAWTC 2 cut(s) 1147, 1281
Tru1I TTAA 4 cut(s) 336, 572, 801, 1130
Tru9I TTAA 4 cut(s) 336, 572, 801, 1130
TscAI CASTG 4 cut(s) 159, 501, 697, 739
TseFI GTSAC 3 cut(s) 1002, 1193, 1201
Tsp45I GTSAC 3 cut(s) 1002, 1193, 1201
TspDTI ATGAA 5 cut(s) 435, 546, 1045, 1401, 1482
TspGWI ACGGA 2 cut(s) 1412, 1467
TspRI CASTG 4 cut(s) 159, 501, 697, 739
VpaK11BI GGWCC 2 cut(s) 127, 354
XapI RAATTY 2 cut(s) 546, 859
XceI RCATGY 1 cut(s) 1430
XhoI CTCGAG 1 cut(s) 131
XmiI GTMKAC 1 cut(s) 1352
XspI CTAG 1 cut(s) 299
ZrmI AGTACT 1 cut(s) 1379
Zsp2I ATGCAT 1 cut(s) 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.