MD11G1307100.v1.1

Endoglucanase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0013022
Physical Location & Seq
Reverse (-)
42124702 .. 42128253
3552 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1307100.v1.1.491

Sequence Viewer

Length: 1527 bp
ATGGCTTTTTCTCCCACACTTGGACTCCTCCTCCTCTCCTGTTCCACCACTCTCCTCCTCCTCTGCAATGCCAACCCCATTCCCGGCTACCACCGCAACCCAATCTACCGCCACCATCGCTCCGCCAGCCACAACTACAGAGATGCCCTCACCAAGTCCATCCTCTTCTTCGAAGGCCAGAGGTCCGGAAAGCTCCCTCCTAACCAGAGGGTTTCTTGGAGGAGAGACTCTGGCCTCTCCGACGGCGCCGCCGCACACGTGGATTTGGTTGGAGGATACTACGATGCAGGGGACAATGTGAAGTTTGGGTTTCCCATGGCTTTCACCACCACCATGCTTTCATGGAGTGTGATCGAGTTCGGCGGGTTGATGAAGGGAGAGCTTCAGAATGCTAGGCAGGCTATCCGGTGGGCCACCGACTACCTCCTCAAAGCTACCGCGCACCCAGGCACCATCTATGTTCAGGTTGGTGATGCGACCAAGGACCATGCTTGTTGGGAGAGACCAGAAGACATGGACACCCCAAGAACTGTGTTGAAGATTGACCAAAACACCCCTGGTTCTGAAGTTGCAGCTGAAACTGCTGCTGCTCTCGCTTCTGCCTCATTGGTCTTCAGAAGATGTGACCCATCTTACTCCAAGCTTCTGCTCAGGAGGGCCATGAGCGTGTTTGCGTTTGCCGATAGGCACAGAGGCCTTTACAGCATCGGATTGAAGAAGTTTGTGTGCCCCTACTACTGTGATTACTCTGGCTATCAGGATGAGCTTTTGTGGGGTGCTGCTTGGCTGCACAAGGCCACCAAAAATCCCATGTATCTCAGCTACATTCAGCTTAACGGTCAGATCCTCGGCGCGGCGGAGTTCGATAACACGTTCGGATGGGATAACAAGCACGTCGGAGCACGAATCCTTCTTTCCAAGGCATTCCTCGTTCAAAAGGTGAGGTCACTCCATGAGTACAAAGGGCATGCAGATAGTTTCATCTGTTCAATCATTCCCGGAGCCTCTTACTCGGCCCAATACACTCCAGGTGGTCTTCTGTTCAAGATGAATGACAGCAACATGCAGTATGTGACATCCACCTCGTTTCTGATCTTGAGCTACGCCAAGTATTTAACCCATTCCCGCCAGGTGGTTAACTGCGGCGGCACCGTCATCACCCCAATGTGGCTCCGAGCAATTGCCAAGAGACAGGTGGATTATTTGCTAGGAGACAACCCAATGAAGATGTCCTACATGGTGGGGTACGGCCCACGGTACCCACAGAGGATCCACCACAGGGGCTCATCCCTGCCGTCCGTCGCCGCACACCCGGCCAAGATCCAATGCTCGTCCGGATTCAGCGTGATGAGCTCCCAATCCCCTAACCCCAACATCCTGGTGGGGGCAGTGATCGGTGGGCCCGACCAGAACGACAAGTTCCCAGATCAACGGTCAGATTACGAGCAGTCGGAGCCAGCCACTTACATTAACGCACCCCTCGTAGGAACACTGACTTATCTTGCCCACTCATTTGGCCAGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004553 GO:0007275 GO:0007389 GO:0008150 GO:0008810 GO:0009605 GO:0009607 GO:0009624 GO:0016787 GO:0016798 GO:0032501 GO:0032502 GO:0043207 GO:0048856 GO:0050896 GO:0051704 GO:0051707
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_9

Protein Analysis

509

Amino Acids

56.32

Weight (kDa)

9.06

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_9 PF00759 46 - 498 4e-161 Glycosyl hydrolase family 9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013022)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02800 AT4G02290 AT4G02290
fragaria_vesca FvH4_2g25990 FvH4_2g25990
malus_domestica MD03G1291200.v1.1 MD11G1307100.v1.1
prunus_persica Prupe.8G264200_v2.0.a1
pyrus_communis pycom03g23050 pycom11g26870
rosa_chinensis RchiOBHm_Chr6g0294351
rosa_laevigata RLG00000011878
rosa_multiflora Rmu_sc0005369.1_g000011
rosa_roxburghii Rroxscaffold_7G00173450
rosa_rugosa Rorug06G0243700
rosa_samantha Rh6AG356300 Rh6CG370300
rosa_wichuraiana Rw6G031050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1257
AccB1I GGYRCC 4 cut(s) 245, 449, 1148, 1257
AccII CGCG 2 cut(s) 440, 854
AccIII TCCGGA 2 cut(s) 185, 1334
AclWI GGATC 4 cut(s) 838, 1264, 1277, 1315
AcoI YGGCCR 2 cut(s) 1314, 1516
AcuI CTGAAG 3 cut(s) 368, 585, 598
AcvI CACGTG 1 cut(s) 259
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 3 cut(s) 959, 1247, 1259
AfiI CCNNNNNNNGG 8 cut(s) 20, 83, 853, 1132, 1167, 1279, 1384, 1484
AflIII ACRYGT 2 cut(s) 256, 870
AgsI TTSAA 5 cut(s) 538, 715, 935, 990, 1045
AjiI CACGTC 1 cut(s) 895
AjnI CCWGG 5 cut(s) 445, 556, 1027, 1128, 1377
Alw21I GWGCWC 2 cut(s) 904, 1355
Alw26I GTCTC 4 cut(s) 219, 496, 1183, 1206
AlwI GGATC 4 cut(s) 838, 1264, 1277, 1315
Aor13HI TCCGGA 2 cut(s) 185, 1334
ApaI GGGCCC 1 cut(s) 1404
ApeKI GCWGC 5 cut(s) 572, 584, 587, 779, 787
Asp718I GGTACC 1 cut(s) 1257
AspLEI GCGC 3 cut(s) 248, 442, 854
AspS9I GGNCC 8 cut(s) 183, 411, 484, 657, 1015, 1250, 1400, 1401
AsuC2I CCSGG 3 cut(s) 84, 999, 1313
AsuHPI GGTGA 5 cut(s) 142, 316, 482, 952, 1150
AsuII TTCGAA 1 cut(s) 171
AvaII GGWCC 2 cut(s) 183, 484
BaeGI GKGCMC 2 cut(s) 731, 1404
BalI TGGCCA 1 cut(s) 1518
BamHI GGATCC 1 cut(s) 1269
BanI GGYRCC 4 cut(s) 245, 449, 1148, 1257
BanII GRGCYC 3 cut(s) 1286, 1355, 1404
BarI GAAGNNNNNNTAC 2 cut(s) 1217, 1249
BbrPI CACGTG 1 cut(s) 259
BbsI GAAGAC 3 cut(s) 516, 604, 1028
Bbv12I GWGCWC 2 cut(s) 904, 1355
BbvI GCAGC 5 cut(s) 571, 574, 584, 766, 774
BccI CCATC 5 cut(s) 123, 167, 461, 637, 873
BceAI ACGGC 3 cut(s) 259, 1264, 1279
BciT130I CCWGG 5 cut(s) 447, 558, 1029, 1130, 1379
BciVI GTATCC 1 cut(s) 269
BcnI CCSGG 3 cut(s) 84, 999, 1313
BcoDI GTCTC 4 cut(s) 219, 496, 1183, 1206
BfaI CTAG 2 cut(s) 393, 1208
BfmI CTRYAG 1 cut(s) 136
BfoI RGCGCY 1 cut(s) 249
BfuI GTATCC 1 cut(s) 269
Bme1390I CCNGG 8 cut(s) 84, 447, 558, 999, 1029, 1130, 1313, 1379
Bme18I GGWCC 2 cut(s) 183, 484
BmgBI CACGTC 1 cut(s) 895
BmgT120I GGNCC 8 cut(s) 183, 411, 484, 657, 1015, 1250, 1400, 1401
BmiI GGNNCC 9 cut(s) 247, 451, 1003, 1150, 1172, 1259, 1271, 1402, 1455
BmrFI CCNGG 8 cut(s) 84, 447, 558, 999, 1029, 1130, 1313, 1379
BmsI GCATC 4 cut(s) 133, 274, 463, 714
BpiI GAAGAC 3 cut(s) 516, 604, 1028
BplI GAGNNNNNCTC 2 cut(s) 132, 164
BpmI CTGGAG 1 cut(s) 1011
Bpu10I CCTNAGC 1 cut(s) 650
Bpu14I TTCGAA 1 cut(s) 171
BpuEI CTTGAG 1 cut(s) 1117
BpuMI CCSGG 3 cut(s) 84, 999, 1313
BsaAI YACGTR 1 cut(s) 259
BsaHI GRCGYC 1 cut(s) 246
BsaI GGTCTC 1 cut(s) 496
BsaJI CCNNGG 7 cut(s) 315, 445, 480, 556, 847, 918, 1253
BsaWI WCCGGW 3 cut(s) 185, 405, 1334
BsaXI ACNNNNNCTCC 6 cut(s) 9, 15, 39, 45, 104, 134
Bsc4I CCNNNNNNNGG 8 cut(s) 20, 83, 853, 1132, 1167, 1279, 1384, 1484
Bse3DI GCAATG 1 cut(s) 73
BseAI TCCGGA 2 cut(s) 185, 1334
BseBI CCWGG 5 cut(s) 447, 558, 1029, 1130, 1379
BseDI CCNNGG 7 cut(s) 315, 445, 480, 556, 847, 918, 1253
BseGI GGATG 6 cut(s) 159, 766, 884, 1076, 1286, 1374
BseLI CCNNNNNNNGG 8 cut(s) 20, 83, 853, 1132, 1167, 1279, 1384, 1484
BseMI GCAATG 1 cut(s) 73
BseMII CTCAG 2 cut(s) 664, 832
BseRI GAGGAG 8 cut(s) 17, 20, 23, 44, 47, 50, 235, 416
BseSI GKGCMC 2 cut(s) 731, 1404
BseXI GCAGC 5 cut(s) 571, 574, 584, 766, 774
BsgI GTGCAG 1 cut(s) 773
Bsh1236I CGCG 2 cut(s) 440, 854
BshNI GGYRCC 4 cut(s) 245, 449, 1148, 1257
BsiHKAI GWGCWC 2 cut(s) 904, 1355
BsiSI CCGG 6 cut(s) 84, 186, 406, 999, 1313, 1335
BslFI GGGAC 1 cut(s) 305
BslI CCNNNNNNNGG 8 cut(s) 20, 83, 853, 1132, 1167, 1279, 1384, 1484
BsmAI GTCTC 4 cut(s) 219, 496, 1183, 1206
BsmFI GGGAC 1 cut(s) 305
BsmI GAATGC 2 cut(s) 394, 923
Bso31I GGTCTC 1 cut(s) 496
Bsp119I TTCGAA 1 cut(s) 171
Bsp120I GGGCCC 1 cut(s) 1400
Bsp1286I GDGCHC 5 cut(s) 731, 904, 1286, 1355, 1404
Bsp13I TCCGGA 2 cut(s) 185, 1334
Bsp143I GATC 7 cut(s) 351, 843, 1092, 1269, 1320, 1392, 1426
Bsp19I CCATGG 1 cut(s) 315
BspCNI CTCAG 2 cut(s) 663, 831
BspEI TCCGGA 2 cut(s) 185, 1334
BspFNI CGCG 2 cut(s) 440, 854
BspLI GGNNCC 9 cut(s) 247, 451, 1003, 1150, 1172, 1259, 1271, 1402, 1455
BspPI GGATC 4 cut(s) 838, 1264, 1277, 1315
BspT104I TTCGAA 1 cut(s) 171
BspT107I GGYRCC 4 cut(s) 245, 449, 1148, 1257
BspTNI GGTCTC 1 cut(s) 496
BsrDI GCAATG 1 cut(s) 73
BssECI CCNNGG 7 cut(s) 315, 445, 480, 556, 847, 918, 1253
BssMI GATC 7 cut(s) 351, 843, 1092, 1269, 1320, 1392, 1426
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 3 cut(s) 315, 480, 918
Bst2UI CCWGG 5 cut(s) 447, 558, 1029, 1130, 1379
Bst4CI ACNGT 6 cut(s) 532, 740, 839, 1153, 1257, 1434
Bst6I CTCTTC 1 cut(s) 170
BstACI GRCGYC 1 cut(s) 246
BstBAI YACGTR 1 cut(s) 259
BstBI TTCGAA 1 cut(s) 171
BstC8I GCNNGC 5 cut(s) 127, 399, 969, 1458, 1520
BstDEI CTNAG 2 cut(s) 650, 818
BstDSI CCRYGG 2 cut(s) 315, 1253
BstF5I GGATG 6 cut(s) 159, 766, 884, 1076, 1286, 1374
BstFNI CGCG 2 cut(s) 440, 854
BstH2I RGCGCY 1 cut(s) 249
BstHHI GCGC 3 cut(s) 248, 442, 854
BstKTI GATC 7 cut(s) 354, 846, 1095, 1272, 1323, 1395, 1429
BstMAI GTCTC 4 cut(s) 219, 496, 1183, 1206
BstMBI GATC 7 cut(s) 351, 843, 1092, 1269, 1320, 1392, 1426
BstNI CCWGG 5 cut(s) 447, 558, 1029, 1130, 1379
BstNSI RCATGY 2 cut(s) 971, 1066
BstSCI CCNGG 8 cut(s) 82, 445, 556, 997, 1027, 1128, 1311, 1377
BstSFI CTRYAG 1 cut(s) 136
BstSLI GKGCMC 2 cut(s) 731, 1404
BstUI CGCG 2 cut(s) 440, 854
BstV1I GCAGC 5 cut(s) 571, 574, 584, 766, 774
BstV2I GAAGAC 3 cut(s) 516, 604, 1028
BstX2I RGATCY 3 cut(s) 843, 1269, 1320
BstXI CCANNNNNNTGG 2 cut(s) 1378, 1514
BstYI RGATCY 3 cut(s) 843, 1269, 1320
BsuI GTATCC 1 cut(s) 269
BtgI CCRYGG 2 cut(s) 315, 1253
BtgZI GCGATG 1 cut(s) 101
BtrI CACGTC 1 cut(s) 895
BtsCI GGATG 6 cut(s) 159, 766, 884, 1076, 1286, 1374
BtsI GCAGTG 1 cut(s) 1395
BtsIMutI CAGTG 2 cut(s) 1395, 1490
Cac8I GCNNGC 5 cut(s) 127, 399, 969, 1458, 1520
CfoI GCGC 3 cut(s) 248, 442, 854
Cfr13I GGNCC 8 cut(s) 183, 411, 484, 657, 1015, 1250, 1400, 1401
Csp6I GTAC 3 cut(s) 958, 1246, 1258
CviQI GTAC 3 cut(s) 958, 1246, 1258
DdeI CTNAG 2 cut(s) 650, 818
DinI GGCGCC 1 cut(s) 247
DpnI GATC 7 cut(s) 353, 845, 1094, 1271, 1322, 1394, 1428
DpnII GATC 7 cut(s) 351, 843, 1092, 1269, 1320, 1392, 1426
EaeI YGGCCR 2 cut(s) 1314, 1516
Eam1104I CTCTTC 1 cut(s) 170
EarI CTCTTC 1 cut(s) 170
EciI GGCGGA 2 cut(s) 112, 872
Ecl136II GAGCTC 1 cut(s) 1353
Eco130I CCWWGG 3 cut(s) 315, 480, 918
Eco147I AGGCCT 1 cut(s) 696
Eco24I GRGCYC 3 cut(s) 1286, 1355, 1404
Eco31I GGTCTC 1 cut(s) 496
Eco47I GGWCC 2 cut(s) 183, 484
Eco53kI GAGCTC 1 cut(s) 1353
Eco57I CTGAAG 3 cut(s) 368, 585, 598
Eco72I CACGTG 1 cut(s) 259
EcoICRI GAGCTC 1 cut(s) 1353
EcoRII CCWGG 5 cut(s) 445, 556, 1027, 1128, 1377
EcoT14I CCWWGG 3 cut(s) 315, 480, 918
EcoT38I GRGCYC 3 cut(s) 1286, 1355, 1404
EgeI GGCGCC 1 cut(s) 247
EheI GGCGCC 1 cut(s) 247
ErhI CCWWGG 3 cut(s) 315, 480, 918
FaqI GGGAC 1 cut(s) 305
FauI CCCGC 2 cut(s) 356, 1133
FokI GGATG 6 cut(s) 146, 773, 891, 1063, 1273, 1361
FriOI GRGCYC 3 cut(s) 1286, 1355, 1404
FspBI CTAG 2 cut(s) 393, 1208
GlaI GCGC 3 cut(s) 247, 441, 853
GsuI CTGGAG 1 cut(s) 1011
HaeII RGCGCY 1 cut(s) 249
HapII CCGG 6 cut(s) 84, 186, 406, 999, 1313, 1335
HhaI GCGC 3 cut(s) 248, 442, 854
Hin1I GRCGYC 1 cut(s) 246
Hin6I GCGC 3 cut(s) 246, 440, 852
HinP1I GCGC 3 cut(s) 246, 440, 852
HincII GTYRAC 1 cut(s) 1138
HindII GTYRAC 1 cut(s) 1138
HindIII AAGCTT 1 cut(s) 641
HinfI GANTC 4 cut(s) 24, 227, 906, 1338
HpaI GTTAAC 1 cut(s) 1138
HpaII CCGG 6 cut(s) 84, 186, 406, 999, 1313, 1335
HphI GGTGA 5 cut(s) 142, 316, 482, 952, 1150
Hpy166II GTNNAC 1 cut(s) 1138
Hpy188III TCNNGA 6 cut(s) 186, 652, 758, 1045, 1096, 1335
Hpy8I GTNNAC 1 cut(s) 1138
Hpy99I CGWCG 3 cut(s) 245, 899, 1304
HpyAV CCTTC 3 cut(s) 167, 367, 920
HpyCH4III ACNGT 6 cut(s) 532, 740, 839, 1153, 1257, 1434
HpyCH4IV ACGT 3 cut(s) 258, 872, 894
HpyCH4V TGCA 6 cut(s) 66, 287, 572, 790, 971, 1066
HpyF3I CTNAG 2 cut(s) 650, 818
HpySE526I ACGT 3 cut(s) 258, 872, 894
Hsp92I GRCGYC 1 cut(s) 246
HspAI GCGC 3 cut(s) 246, 440, 852
KasI GGCGCC 1 cut(s) 245
Kpn2I TCCGGA 2 cut(s) 185, 1334
KpnI GGTACC 1 cut(s) 1261
KspAI GTTAAC 1 cut(s) 1138
Kzo9I GATC 7 cut(s) 351, 843, 1092, 1269, 1320, 1392, 1426
LmnI GCTCC 7 cut(s) 125, 198, 899, 1001, 1176, 1358, 1453
Lsp1109I GCAGC 5 cut(s) 571, 574, 584, 766, 774
LweI GCATC 4 cut(s) 133, 274, 463, 714
MaeI CTAG 2 cut(s) 393, 1208
MaeII ACGT 3 cut(s) 258, 872, 894
MaeIII GTNAC 3 cut(s) 623, 945, 1072
MalI GATC 7 cut(s) 353, 845, 1094, 1271, 1322, 1394, 1428
MboI GATC 7 cut(s) 351, 843, 1092, 1269, 1320, 1392, 1426
MboII GAAGA 9 cut(s) 157, 160, 521, 550, 604, 630, 727, 1028, 1237
MfeI CAATTG 1 cut(s) 1179
MflI RGATCY 3 cut(s) 843, 1269, 1320
MhlI GDGCHC 5 cut(s) 731, 904, 1286, 1355, 1404
MlsI TGGCCA 1 cut(s) 1518
MluCI AATT 1 cut(s) 1179
MluNI TGGCCA 1 cut(s) 1518
Mly113I GGCGCC 1 cut(s) 246
MlyI GAGTC 2 cut(s) 18, 221
MmeI TCCRAC 4 cut(s) 250, 264, 877, 1431
Mox20I TGGCCA 1 cut(s) 1518
MroI TCCGGA 2 cut(s) 185, 1334
MscI TGGCCA 1 cut(s) 1518
MseI TTAA 4 cut(s) 834, 1115, 1137, 1470
MslI CAYNNNNRTG 4 cut(s) 332, 665, 1163, 1379
Msp20I TGGCCA 1 cut(s) 1518
MspA1I CMGCKG 1 cut(s) 575
MspI CCGG 6 cut(s) 84, 186, 406, 999, 1313, 1335
MspR9I CCNGG 8 cut(s) 84, 447, 558, 999, 1029, 1130, 1313, 1379
MunI CAATTG 1 cut(s) 1179
Mva1269I GAATGC 2 cut(s) 394, 923
MvaI CCWGG 5 cut(s) 447, 558, 1029, 1130, 1379
MvnI CGCG 2 cut(s) 440, 854
NarI GGCGCC 1 cut(s) 246
NciI CCSGG 3 cut(s) 84, 999, 1313
NcoI CCATGG 1 cut(s) 315
NdeII GATC 7 cut(s) 351, 843, 1092, 1269, 1320, 1392, 1426
NlaIV GGNNCC 9 cut(s) 247, 451, 1003, 1150, 1172, 1259, 1271, 1402, 1455
NmeAIII GCCGAG 2 cut(s) 828, 992
NmuCI GTSAC 3 cut(s) 623, 945, 1072
NspI RCATGY 2 cut(s) 971, 1066
NspV TTCGAA 1 cut(s) 171
PaeI GCATGC 1 cut(s) 971
PceI AGGCCT 1 cut(s) 696
PcsI WCGNNNNNNNCGW 2 cut(s) 1401, 1479
PctI GAATGC 2 cut(s) 394, 923
PfeI GAWTC 2 cut(s) 906, 1338
PfoI TCCNGGA 1 cut(s) 997
PleI GAGTC 2 cut(s) 18, 221
PluTI GGCGCC 1 cut(s) 249
PmaCI CACGTG 1 cut(s) 259
PmlI CACGTG 1 cut(s) 259
PpsI GAGTC 2 cut(s) 18, 221
Ppu21I YACGTR 1 cut(s) 259
Psp124BI GAGCTC 1 cut(s) 1355
Psp6I CCWGG 5 cut(s) 445, 556, 1027, 1128, 1377
PspCI CACGTG 1 cut(s) 259
PspGI CCWGG 5 cut(s) 445, 556, 1027, 1128, 1377
PspN4I GGNNCC 9 cut(s) 247, 451, 1003, 1150, 1172, 1259, 1271, 1402, 1455
PspOMI GGGCCC 1 cut(s) 1400
PspPI GGNCC 8 cut(s) 183, 411, 484, 657, 1015, 1250, 1400, 1401
PsuI RGATCY 3 cut(s) 843, 1269, 1320
PvuII CAGCTG 1 cut(s) 575
RsaI GTAC 3 cut(s) 959, 1247, 1259
RsaNI GTAC 3 cut(s) 958, 1246, 1258
RseI CAYNNNNRTG 4 cut(s) 332, 665, 1163, 1379
SacI GAGCTC 1 cut(s) 1355
SaqAI TTAA 4 cut(s) 834, 1115, 1137, 1470
Sau3AI GATC 7 cut(s) 351, 843, 1092, 1269, 1320, 1392, 1426
Sau96I GGNCC 8 cut(s) 183, 411, 484, 657, 1015, 1250, 1400, 1401
SchI GAGTC 2 cut(s) 18, 221
ScrFI CCNGG 8 cut(s) 84, 447, 558, 999, 1029, 1130, 1313, 1379
SduI GDGCHC 5 cut(s) 731, 904, 1286, 1355, 1404
SfaNI GCATC 4 cut(s) 133, 274, 463, 714
SfcI CTRYAG 1 cut(s) 136
SfoI GGCGCC 1 cut(s) 247
SfuI TTCGAA 1 cut(s) 171
SinI GGWCC 2 cut(s) 183, 484
SmiMI CAYNNNNRTG 4 cut(s) 332, 665, 1163, 1379
SmlI CTYRAG 1 cut(s) 1096
SmoI CTYRAG 1 cut(s) 1096
SphI GCATGC 1 cut(s) 971
Sse9I AATT 1 cut(s) 1179
SseBI AGGCCT 1 cut(s) 696
SspDI GGCGCC 1 cut(s) 245
SspMI CTAG 2 cut(s) 393, 1208
SstI GAGCTC 1 cut(s) 1355
StuI AGGCCT 1 cut(s) 696
StyD4I CCNGG 8 cut(s) 82, 445, 556, 997, 1027, 1128, 1311, 1377
StyI CCWWGG 3 cut(s) 315, 480, 918
TaaI ACNGT 6 cut(s) 532, 740, 839, 1153, 1257, 1434
TaiI ACGT 3 cut(s) 261, 875, 897
TaqI TCGA 3 cut(s) 171, 354, 864
TasI AATT 1 cut(s) 1179
TatI WGTACW 1 cut(s) 957
TauI GCSGC 6 cut(s) 251, 254, 857, 1146, 1149, 1307
TfiI GAWTC 2 cut(s) 906, 1338
Tru1I TTAA 4 cut(s) 834, 1115, 1137, 1470
Tru9I TTAA 4 cut(s) 834, 1115, 1137, 1470
TscAI CASTG 2 cut(s) 1395, 1497
TseFI GTSAC 3 cut(s) 623, 945, 1072
TseI GCWGC 5 cut(s) 572, 584, 587, 779, 787
Tsp45I GTSAC 3 cut(s) 623, 945, 1072
TspDTI ATGAA 5 cut(s) 330, 386, 970, 1064, 1238
TspGWI ACGGA 1 cut(s) 1288
TspRI CASTG 2 cut(s) 1395, 1497
VpaK11BI GGWCC 2 cut(s) 183, 484
XceI RCATGY 2 cut(s) 971, 1066
XcmI CCANNNNNNNNNTGG 3 cut(s) 554, 1192, 1378
XspI CTAG 2 cut(s) 393, 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.