Prupe.8G264200_v2.0.a1

Endoglucanase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
22175606 .. 22178164
2559 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G264200.1

Sequence Viewer

Length: 1542 bp
ATGGCTCTGTTTGGTTTCTCTTTCCCACTTGTATTTCTCCTCCTCTCTTGCTTTATCACTCAGCTGCTCTGCAATGCCAATGCCTTTCCTGGGCACTACCACAACCCAATCCAACGCCATCGCCATCCTCGCTTTGCCAGTCACAACTACAGAGATGCTCTCACTAAGTCCATCCTCTTCTTTGAAGGCCAGAGGTCAGGGAAGCTCCCTTCTAACCAGAGGATTTCTTGGAGGAGAGATTCTGGTCTTTCAGATGGCTCAGCCCTGCATGTTGATTTGGTTGGAGGGTACTATGATGCAGGGGACAATGTGAAGTTTGGGTTTCCCATGGCTTTTACCACCACCATGCTTTCATGGAGTGTTATTGAGTTTGGTGGGTTGATGAACGGTGAGTTGCAGAATGCCAAGGAAGCCATTCGTTGGGCTACTGATTACCTGCTCAAAGCAACTGCGCACCCAGGCACCATCTATGTTCAGGTTGGTGATGCTAACAAGGACCATGCTTGTTGGGAGAGACCAGAAGACATGGATACCCCAAGAAGTGTTTTCAAGATTGACCAAAACACCCCTGGTTCTGAAGTAGCAGCTGAAACTGCTGCTGCTCTTGCAGCTGCATCATTGGTCTTCAGAAGAAGTGACCGTACTTACTCCAAACTTTTGGCCAGGAGGGCTATCAGCGTGTTTGAGTTTGCTGATAAGCACAGAGGAGCCTACAGCACTGGATTGAAGAAATATGTGTGCCCCTTCTATTGTGATTACTCTGGTTATCAGGATGAGCTACTGTGGGCTGCTGCTTGGCTGCAAAAGGCCACCAAAAATCCAACCTATCTCAACTACATTCAAGCTAATGGCCAGATCCTTGGAGCCGCCGAGTTTGATAACACATTTGGATGGGATAATAAGCATGTTGGAGCAAGAATTCTTCTTTCCAAGGCATTCCTCATCCAAAGGGTCAGATCCCTCCATGACTACAAAGGTCATGCAGATAGTTTTATCTGTTCAATCATACCAGGAGCCTCTTACTCTTCAGCCCAATACACCCCAGGTGGTCTTCTTTTCAAAATGAATGATAGCAACATGCAATATGTGACCTCCACCTCATTTCTGCTCTTAAGCTACGCCAAATACTTAACCACTGCCCGCCAGGTGGTCAATTGTGGTGGAACCGCCATCACCCCTAAGAGGCTCCGAGCTATTGCCAAAAGACAGGTGGATTACCTACTAGGAGACAATCCCTTGAAGATGTCCTACATGGTGGGGTATGGCCCAAGGTACCCCCAAAGGATTCACCACAGGGGCTCATCCCTGCCGTCCATTGCCGCACACCCAGCCAAGATCCAGTGCTCTTCTGGGTTCAATGTGATGAGGTCCCAGTCCCCAAACCCCAACATCCTGGTGGGTGCAGTGATTGGTGGGCCCGACCAGCATGACAGGTTCCCAGATCAACGGTCAGATTATGAGCAGTCAGAGCCAGCCACGTATATTAACGCACCCCTAGTAGGGACACTAGCTTATCTTGCGCACTCATTTGGGCAGATGTAG
Functional Annotation

Protein Analysis

514

Amino Acids

57.11

Weight (kDa)

9.16

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013022)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02800 AT4G02290 AT4G02290
fragaria_vesca FvH4_2g25990 FvH4_2g25990
malus_domestica MD03G1291200.v1.1 MD11G1307100.v1.1
prunus_persica Prupe.8G264200_v2.0.a1
pyrus_communis pycom03g23050 pycom11g26870
rosa_chinensis RchiOBHm_Chr6g0294351
rosa_laevigata RLG00000011878
rosa_multiflora Rmu_sc0005369.1_g000011
rosa_roxburghii Rroxscaffold_7G00173450
rosa_rugosa Rorug06G0243700
rosa_samantha Rh6AG356300 Rh6CG370300
rosa_wichuraiana Rw6G031050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 453, 1521
Acc36I ACCTGC 1 cut(s) 444
Acc65I GGTACC 1 cut(s) 1272
AccB1I GGYRCC 2 cut(s) 461, 1272
AccB7I CCANNNNNTGG 1 cut(s) 420
AciI CCGC 4 cut(s) 867, 1141, 1167, 1320
AclWI GGATC 3 cut(s) 850, 951, 1330
AcoI YGGCCR 2 cut(s) 660, 850
AcsI RAATTY 1 cut(s) 918
AcuI CTGAAG 3 cut(s) 597, 610, 1011
AfaI GTAC 3 cut(s) 290, 643, 1274
AfiI CCNNNNNNNGG 6 cut(s) 90, 420, 1147, 1182, 1499, 1500
AflII CTTAAG 1 cut(s) 1111
AgsI TTSAA 8 cut(s) 185, 550, 727, 842, 1002, 1060, 1240, 1357
AjnI CCWGG 8 cut(s) 88, 457, 568, 662, 1009, 1042, 1143, 1392
AluBI AGCT 9 cut(s) 64, 205, 587, 611, 778, 845, 1116, 1193, 1511
AluI AGCT 9 cut(s) 64, 205, 587, 611, 778, 845, 1116, 1193, 1511
Alw21I GWGCWC 1 cut(s) 1346
Alw26I GTCTC 2 cut(s) 508, 1221
AlwI GGATC 3 cut(s) 850, 951, 1330
AoxI GGCC 6 cut(s) 187, 660, 807, 850, 1264, 1415
ApaI GGGCCC 1 cut(s) 1419
ApeKI GCWGC 9 cut(s) 64, 584, 596, 599, 608, 611, 788, 791, 799
ApoI RAATTY 1 cut(s) 918
Asp700I GAANNNNTTC 1 cut(s) 414
Asp718I GGTACC 1 cut(s) 1272
AspLEI GCGC 2 cut(s) 454, 1522
AspS9I GGNCC 5 cut(s) 496, 1265, 1368, 1415, 1416
AsuHPI GGTGA 4 cut(s) 401, 494, 1165, 1280
AvaII GGWCC 2 cut(s) 496, 1368
BaeGI GKGCMC 3 cut(s) 96, 743, 1419
BalI TGGCCA 2 cut(s) 662, 852
BanI GGYRCC 2 cut(s) 461, 1272
BanII GRGCYC 2 cut(s) 1301, 1419
BarI GAAGNNNNNNTAC 4 cut(s) 625, 657, 1232, 1264
BbsI GAAGAC 3 cut(s) 528, 616, 1043
Bbv12I GWGCWC 1 cut(s) 1346
BbvI GCAGC 9 cut(s) 51, 583, 586, 596, 598, 620, 775, 778, 786
BccI CCATC 7 cut(s) 126, 132, 179, 248, 473, 885, 1178
BceAI ACGGC 1 cut(s) 1294
BciT130I CCWGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
BciVI GTATCC 1 cut(s) 523
BcoDI GTCTC 2 cut(s) 508, 1221
BfaI CTAG 3 cut(s) 1223, 1496, 1508
BfmI CTRYAG 2 cut(s) 148, 712
BfrI CTTAAG 1 cut(s) 1111
BfuAI ACCTGC 1 cut(s) 444
BfuI GTATCC 1 cut(s) 523
BglI GCCNNNNNGGC 1 cut(s) 668
BlpI GCTNAGC 1 cut(s) 259
Bme1390I CCNGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
Bme18I GGWCC 2 cut(s) 496, 1368
BmgT120I GGNCC 5 cut(s) 496, 1265, 1368, 1415, 1416
BmrFI CCNGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
BmrI ACTGGG 1 cut(s) 1366
BmsI GCATC 4 cut(s) 145, 286, 475, 623
BmuI ACTGGG 1 cut(s) 1366
BpiI GAAGAC 3 cut(s) 528, 616, 1043
BplI GAGNNNNNCTC 2 cut(s) 144, 176
Bpu1102I GCTNAGC 1 cut(s) 259
BsaAI YACGTR 1 cut(s) 1479
BsaI GGTCTC 1 cut(s) 508
BsaJI CCNNGG 9 cut(s) 89, 327, 405, 457, 568, 859, 930, 1042, 1268
Bsc4I CCNNNNNNNGG 6 cut(s) 90, 420, 1147, 1182, 1499, 1500
Bse1I ACTGG 4 cut(s) 138, 724, 1339, 1372
Bse3DI GCAATG 2 cut(s) 79, 1314
BseBI CCWGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
BseDI CCNNGG 9 cut(s) 89, 327, 405, 457, 568, 859, 930, 1042, 1268
BseGI GGATG 7 cut(s) 124, 171, 778, 896, 942, 1301, 1389
BseLI CCNNNNNNNGG 6 cut(s) 90, 420, 1147, 1182, 1499, 1500
BseMI GCAATG 2 cut(s) 79, 1314
BseMII CTCAG 2 cut(s) 74, 273
BseNI ACTGG 4 cut(s) 138, 724, 1339, 1372
BseRI GAGGAG 4 cut(s) 29, 32, 247, 720
BseSI GKGCMC 3 cut(s) 96, 743, 1419
BseXI GCAGC 9 cut(s) 51, 583, 586, 596, 598, 620, 775, 778, 786
BseYI CCCAGC 1 cut(s) 1327
BsgI GTGCAG 1 cut(s) 1422
BshFI GGCC 6 cut(s) 189, 662, 809, 852, 1266, 1417
BshNI GGYRCC 2 cut(s) 461, 1272
BsiHKAI GWGCWC 1 cut(s) 1346
BslFI GGGAC 4 cut(s) 317, 1354, 1360, 1516
BslI CCNNNNNNNGG 6 cut(s) 90, 420, 1147, 1182, 1499, 1500
BsmAI GTCTC 2 cut(s) 508, 1221
BsmFI GGGAC 4 cut(s) 317, 1354, 1360, 1516
BsmI GAATGC 2 cut(s) 406, 935
BsnI GGCC 6 cut(s) 189, 662, 809, 852, 1266, 1417
Bso31I GGTCTC 1 cut(s) 508
Bsp120I GGGCCC 1 cut(s) 1415
Bsp1286I GDGCHC 5 cut(s) 96, 743, 1301, 1346, 1419
Bsp143I GATC 4 cut(s) 855, 956, 1335, 1441
Bsp1720I GCTNAGC 1 cut(s) 259
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 4 cut(s) 867, 1141, 1167, 1320
BspANI GGCC 6 cut(s) 189, 662, 809, 852, 1266, 1417
BspCNI CTCAG 2 cut(s) 73, 272
BspMI ACCTGC 1 cut(s) 444
BspPI GGATC 3 cut(s) 850, 951, 1330
BspQI GCTCTTC 1 cut(s) 1351
BspT107I GGYRCC 2 cut(s) 461, 1272
BspTI CTTAAG 1 cut(s) 1111
BspTNI GGTCTC 1 cut(s) 508
BsrDI GCAATG 2 cut(s) 79, 1314
BsrI ACTGG 4 cut(s) 138, 724, 1339, 1372
BssECI CCNNGG 9 cut(s) 89, 327, 405, 457, 568, 859, 930, 1042, 1268
BssMI GATC 4 cut(s) 855, 956, 1335, 1441
BssT1I CCWWGG 5 cut(s) 327, 405, 859, 930, 1268
Bst2UI CCWGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
Bst4CI ACNGT 4 cut(s) 389, 641, 783, 1449
Bst6I CTCTTC 3 cut(s) 182, 1030, 1351
BstAFI CTTAAG 1 cut(s) 1111
BstBAI YACGTR 1 cut(s) 1479
BstC8I GCNNGC 2 cut(s) 1141, 1473
BstDEI CTNAG 4 cut(s) 60, 165, 259, 1179
BstDSI CCRYGG 1 cut(s) 327
BstF5I GGATG 7 cut(s) 124, 171, 778, 896, 942, 1301, 1389
BstHHI GCGC 2 cut(s) 454, 1522
BstKTI GATC 4 cut(s) 858, 959, 1338, 1444
BstMAI GTCTC 2 cut(s) 508, 1221
BstMBI GATC 4 cut(s) 855, 956, 1335, 1441
BstNI CCWGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
BstNSI RCATGY 3 cut(s) 272, 908, 1081
BstSCI CCNGG 8 cut(s) 88, 457, 568, 662, 1009, 1042, 1143, 1392
BstSFI CTRYAG 2 cut(s) 148, 712
BstSLI GKGCMC 3 cut(s) 96, 743, 1419
BstV1I GCAGC 9 cut(s) 51, 583, 586, 596, 598, 620, 775, 778, 786
BstV2I GAAGAC 3 cut(s) 528, 616, 1043
BstX2I RGATCY 3 cut(s) 855, 956, 1335
BstXI CCANNNNNNTGG 3 cut(s) 658, 860, 1393
BstYI RGATCY 3 cut(s) 855, 956, 1335
BsuI GTATCC 1 cut(s) 523
BsuRI GGCC 6 cut(s) 189, 662, 809, 852, 1266, 1417
BtgI CCRYGG 1 cut(s) 327
BtgZI GCGATG 1 cut(s) 104
BtsCI GGATG 7 cut(s) 124, 171, 778, 896, 942, 1301, 1389
BtsI GCAGTG 2 cut(s) 1134, 1410
BtsIMutI CAGTG 4 cut(s) 717, 1134, 1346, 1410
BveI ACCTGC 1 cut(s) 444
Cac8I GCNNGC 2 cut(s) 1141, 1473
CfoI GCGC 2 cut(s) 454, 1522
Cfr13I GGNCC 5 cut(s) 496, 1265, 1368, 1415, 1416
Csp6I GTAC 3 cut(s) 289, 642, 1273
CspCI CAANNNNNGTGG 2 cut(s) 1141, 1176
CviQI GTAC 3 cut(s) 289, 642, 1273
DdeI CTNAG 4 cut(s) 60, 165, 259, 1179
DpnI GATC 4 cut(s) 857, 958, 1337, 1443
DpnII GATC 4 cut(s) 855, 956, 1335, 1441
EaeI YGGCCR 2 cut(s) 660, 850
Eam1104I CTCTTC 3 cut(s) 182, 1030, 1351
EarI CTCTTC 3 cut(s) 182, 1030, 1351
Eco130I CCWWGG 5 cut(s) 327, 405, 859, 930, 1268
Eco24I GRGCYC 2 cut(s) 1301, 1419
Eco31I GGTCTC 1 cut(s) 508
Eco47I GGWCC 2 cut(s) 496, 1368
Eco57I CTGAAG 3 cut(s) 597, 610, 1011
EcoO109I RGGNCCY 1 cut(s) 1368
EcoRI GAATTC 1 cut(s) 918
EcoRII CCWGG 8 cut(s) 88, 457, 568, 662, 1009, 1042, 1143, 1392
EcoT14I CCWWGG 5 cut(s) 327, 405, 859, 930, 1268
EcoT38I GRGCYC 2 cut(s) 1301, 1419
ErhI CCWWGG 5 cut(s) 327, 405, 859, 930, 1268
FaqI GGGAC 4 cut(s) 317, 1354, 1360, 1516
FauI CCCGC 1 cut(s) 1148
FokI GGATG 7 cut(s) 111, 158, 785, 903, 929, 1288, 1376
FriOI GRGCYC 2 cut(s) 1301, 1419
FspBI CTAG 3 cut(s) 1223, 1496, 1508
FspI TGCGCA 2 cut(s) 453, 1521
GlaI GCGC 2 cut(s) 453, 1521
GsaI CCCAGC 1 cut(s) 1331
HaeIII GGCC 6 cut(s) 189, 662, 809, 852, 1266, 1417
HhaI GCGC 2 cut(s) 454, 1522
Hin6I GCGC 2 cut(s) 452, 1520
HinP1I GCGC 2 cut(s) 452, 1520
HinfI GANTC 2 cut(s) 239, 1285
HphI GGTGA 4 cut(s) 401, 494, 1165, 1280
Hpy188I TCNGA 7 cut(s) 253, 577, 629, 956, 1190, 1453, 1468
Hpy188III TCNNGA 2 cut(s) 550, 770
HpyAV CCTTC 3 cut(s) 179, 219, 754
HpyCH4III ACNGT 4 cut(s) 389, 641, 783, 1449
HpyCH4IV ACGT 1 cut(s) 1478
HpyF3I CTNAG 4 cut(s) 60, 165, 259, 1179
HpySE526I ACGT 1 cut(s) 1478
HspAI GCGC 2 cut(s) 452, 1520
KpnI GGTACC 1 cut(s) 1276
Kzo9I GATC 4 cut(s) 855, 956, 1335, 1441
LguI GCTCTTC 1 cut(s) 1351
LmnI GCTCC 6 cut(s) 210, 707, 863, 911, 1013, 1191
Lsp1109I GCAGC 9 cut(s) 51, 583, 586, 596, 598, 620, 775, 778, 786
LweI GCATC 4 cut(s) 145, 286, 475, 623
MaeI CTAG 3 cut(s) 1223, 1496, 1508
MaeII ACGT 1 cut(s) 1478
MaeIII GTNAC 3 cut(s) 140, 635, 1087
MalI GATC 4 cut(s) 857, 958, 1337, 1443
MboI GATC 4 cut(s) 855, 956, 1335, 1441
MfeI CAATTG 1 cut(s) 1153
MflI RGATCY 3 cut(s) 855, 956, 1335
MhlI GDGCHC 5 cut(s) 96, 743, 1301, 1346, 1419
MlsI TGGCCA 2 cut(s) 662, 852
MluCI AATT 2 cut(s) 918, 1153
MluNI TGGCCA 2 cut(s) 662, 852
MmeI TCCRAC 4 cut(s) 136, 262, 845, 889
Mox20I TGGCCA 2 cut(s) 662, 852
MroXI GAANNNNTTC 1 cut(s) 414
MscI TGGCCA 2 cut(s) 662, 852
MseI TTAA 3 cut(s) 1112, 1130, 1485
MslI CAYNNNNRTG 3 cut(s) 344, 889, 1394
Msp20I TGGCCA 2 cut(s) 662, 852
MspA1I CMGCKG 3 cut(s) 64, 587, 611
MspCI CTTAAG 1 cut(s) 1111
MspR9I CCNGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
MunI CAATTG 1 cut(s) 1153
Mva1269I GAATGC 2 cut(s) 406, 935
MvaI CCWGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
NcoI CCATGG 1 cut(s) 327
NdeII GATC 4 cut(s) 855, 956, 1335, 1441
NmeAIII GCCGAG 1 cut(s) 895
NmuCI GTSAC 3 cut(s) 140, 635, 1087
NsbI TGCGCA 2 cut(s) 453, 1521
NspI RCATGY 3 cut(s) 272, 908, 1081
PciSI GCTCTTC 1 cut(s) 1351
PctI GAATGC 2 cut(s) 406, 935
PdmI GAANNNNTTC 1 cut(s) 414
PfeI GAWTC 2 cut(s) 239, 1285
PflMI CCANNNNNTGG 1 cut(s) 420
Ppu21I YACGTR 1 cut(s) 1479
PpuMI RGGWCCY 1 cut(s) 1368
Psp5II RGGWCCY 1 cut(s) 1368
Psp6I CCWGG 8 cut(s) 88, 457, 568, 662, 1009, 1042, 1143, 1392
PspFI CCCAGC 1 cut(s) 1327
PspGI CCWGG 8 cut(s) 88, 457, 568, 662, 1009, 1042, 1143, 1392
PspOMI GGGCCC 1 cut(s) 1415
PspPI GGNCC 5 cut(s) 496, 1265, 1368, 1415, 1416
PspPPI RGGWCCY 1 cut(s) 1368
PsuI RGATCY 3 cut(s) 855, 956, 1335
PvuII CAGCTG 3 cut(s) 64, 587, 611
RsaI GTAC 3 cut(s) 290, 643, 1274
RsaNI GTAC 3 cut(s) 289, 642, 1273
RseI CAYNNNNRTG 3 cut(s) 344, 889, 1394
SapI GCTCTTC 1 cut(s) 1351
SaqAI TTAA 3 cut(s) 1112, 1130, 1485
Sau3AI GATC 4 cut(s) 855, 956, 1335, 1441
Sau96I GGNCC 5 cut(s) 496, 1265, 1368, 1415, 1416
ScrFI CCNGG 8 cut(s) 90, 459, 570, 664, 1011, 1044, 1145, 1394
SduI GDGCHC 5 cut(s) 96, 743, 1301, 1346, 1419
SfaNI GCATC 4 cut(s) 145, 286, 475, 623
SfcI CTRYAG 2 cut(s) 148, 712
SinI GGWCC 2 cut(s) 496, 1368
SmiMI CAYNNNNRTG 3 cut(s) 344, 889, 1394
SmlI CTYRAG 1 cut(s) 1111
SmoI CTYRAG 1 cut(s) 1111
Sse9I AATT 2 cut(s) 918, 1153
SsiI CCGC 4 cut(s) 867, 1141, 1167, 1320
SspMI CTAG 3 cut(s) 1223, 1496, 1508
StyD4I CCNGG 8 cut(s) 88, 457, 568, 662, 1009, 1042, 1143, 1392
StyI CCWWGG 5 cut(s) 327, 405, 859, 930, 1268
TaaI ACNGT 4 cut(s) 389, 641, 783, 1449
TaiI ACGT 1 cut(s) 1481
TasI AATT 2 cut(s) 918, 1153
TauI GCSGC 2 cut(s) 869, 1322
TfiI GAWTC 2 cut(s) 239, 1285
Tru1I TTAA 3 cut(s) 1112, 1130, 1485
Tru9I TTAA 3 cut(s) 1112, 1130, 1485
TscAI CASTG 4 cut(s) 724, 1141, 1346, 1410
TseFI GTSAC 3 cut(s) 140, 635, 1087
TseI GCWGC 9 cut(s) 64, 584, 596, 599, 608, 611, 788, 791, 799
Tsp45I GTSAC 3 cut(s) 140, 635, 1087
TspDTI ATGAA 3 cut(s) 342, 398, 1079
TspRI CASTG 4 cut(s) 724, 1141, 1346, 1410
Van91I CCANNNNNTGG 1 cut(s) 420
Vha464I CTTAAG 1 cut(s) 1111
VpaK11BI GGWCC 2 cut(s) 496, 1368
XapI RAATTY 1 cut(s) 918
XceI RCATGY 3 cut(s) 272, 908, 1081
XcmI CCANNNNNNNNNTGG 4 cut(s) 566, 1207, 1346, 1393
XmnI GAANNNNTTC 1 cut(s) 414
XspI CTAG 3 cut(s) 1223, 1496, 1508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.