Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0005789

Physical Location & Seq

Genomic Coordinates Forward (+)

7352971 .. 7357683

Gene Structure 4713 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1102900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGACGACGACGACGGAGACCGTGAGGCTTCGGGTGGCATTCAAGGAGCGCCACATTCTGAGCAAGTCGCAGAGGACACAAGGACTCCGGCGGAGCTGGATTCTACTCAAGCCTCACCTCCGCATCATCTCCGACCTTGCGGCCCATCTCCTACACGCTTTCGGCCTCCACCGTTCTTGTCCCGATGGCCTCCTCATCTCTATGGATGGGTTTGTGCTTCCGCCTTTTGAGTCGACCTCCATTTTCAAGGATAAAGATATTATCAGTGTGAAAAGGAAAGAGGGCGCATTGTCTGAAATTGCATTGATTGATGATGGAACAAACGCTATTGAGGTGGAGGAAATTGTGGAGAGGCAACCAATTAATGGAGGCATGAAGCTTCTGGCTAATGAGGAATTCGAAAAGGAAACCGGAGGATATGATAGTGATTCGGAAGAGGGTGAACCTGACCAATTGGAGGATATACTTCCTGTTGAAAATGCACCCGATACCGGTTCAAACAGACGGTCCAAGAAAAGGAAGCTTTCAGACAAACCTCAGAGCTCTAAGAGGAAGAGAATTAAATCTGCTGCTACCGCAGAATGTTCAGGTTTACCTGAAGACCTTCAGAATGATGTCCGTGCGGAGAAGAAAGAAAGTTCTCCTCAGTCTCGTGTTCTTACCAAAAAGAGTCGTTCCAAGAAGGAAAAGTCGTTTAGTGTAGAGGATGGACCGGATCATTCAAGCACTCCTAAAACTGACAAAAGAACCAATGGAATAGGTCAATCACTGCTCAATGGAAAGAGGTCCTGTCAGCTTCAAGAGAATGAAATAAAGGGTGTGGTTTCATCTGATATGCCTGATGAAATTAAAAAGATTCCTAGTAGAAGTGCTCGACGTAAAAAGGCCAAAAGGCAATGGTTGAGGGAAAAAATGAAAGCTGAGAAGGAAGAGTTACATCAGACGCAATTGCTCAAAACAAATAATCAGCAATCAACTGGTAAAGATAAACGTCAACAACCAAACACAAACAGTGAAGGAGAGGATGAACAATCAGACACAGATAGTGACGGAGAGGATAAGCGAATGAAAACAGATAACAATGAAGTGAATGAGCAACATAACACGGATAAGGATAAGGAGGAGGATATTGTTCCTGTAGTAATTAGGCCAGGACATATTCGCTTTGAACCCCTCGGAAAAGTGGACGGAGATCAGCCTATTCAGCAGAATAGAAATCCAGTGGAAAATTTTCGGTGGAATGGAATAACCAGCAAGAAGAGGGGTCAAAAATGGGGTATGGAGAAAACAACACATTCAAGAAGTGACCACGAAGATCTGAATCAAGAGTCGCCTGAAATACTGGGTATCGAAAAAGAGATTCCTGTAAATGACCACATGGACTTCGATAAGCTTGAGCTCTGTACCTCTTTACCTAAGGAAGGTGATCAAATTGCATATCGCTTGATTGAATTAACATCATGCTGGACTCCTGAAGTTTCCTCATACCGAGTTGGAGAAGTGTCACGGTACGACCCTCAATCAAATAAGATTATGCTAGTACAGGTTCCAGAATATCCCATTGTTTTTGCGGAGACAGATGAGGCATCTGATGTGGTACCAGATACATCCCTTTACAGGGAAGATCGCTCTTTAGAGGTAGATTATTCTTCCCTTATTGATGTCCGCATTGTTAAGCATGGCAACCTCAACACAGCCAAAGCAGTCCATGGAGATAAAAATGTAGCATCAGGTTCCAGGCAGCTCGACAAAGACAAGGAAACTCGTGCTGCTGCAAAAGCAAGTGCATGGGATGAAATCAGCAAGGCATTGAACGCAAAGAAGGCAGAACTGTCGCAGGAGGAGAACGGTTGGAGTAAAAACGATGGTTCAGTTAGGAGCTCGTGGTCGTATAGGGGCTTGAGAGGTAGCGCATTAGGTCCAACAGTGGCTCGTTTGAGAGCTCAAGGGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0017069 GO:0030619 GO:0030620 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Coilin_N

Protein Analysis

652

Amino Acids

73.35

Weight (kDa)

6.35

Isoelectric Point (pI)

57.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Coilin_N	PF15862	8 - 241	1.3e-14	Coilin N-terminus
Tudor_Coilin	PF23086	458 - 561	5.8e-45	Coilin, C-terminal Tudor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13030
fragaria_vesca	FvH4_4g25440 FvH4_4g25440 FvH4_4g25440 FvH4_4g25440 FvH4_4g25440
malus_domestica	MD13G1102900.v1.1 MD16G1103100.v1.1
prunus_persica	Prupe.1G242900_v2.0.a1 Prupe.1G242900_v2.0.a1 Prupe.1G242900_v2.0.a1 Prupe.1G242900_v2.0.a1 Prupe.1G242900_v2.0.a1 Prupe.1G242900_v2.0.a1 Prupe.1G242900_v2.0.a1
pyrus_communis	pycom13g09000 pycom16g08780
rosa_chinensis	RchiOBHm_Chr4g0432751
rosa_laevigata	RLG00000006815
rosa_multiflora	Rmu_sc0012180.1_g000008
rosa_roxburghii	Rroxscaffold_5G00374210
rosa_rugosa	Rorug04G0262200 Rorug04G0262200
rosa_samantha	Rh4AG316700 Rh4BG324800 Rh4CG339800 Rh4DG320000
rosa_wichuraiana	Rw4G027550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1597
AccB1I	GGYRCC	1 cut(s)	1597
AccB7I	CCANNNNNTGG	1 cut(s)	365
AccI	GTMKAC	1 cut(s)	233
AciI	CCGC	8 cut(s)	91, 121, 140, 221, 576, 623, 1571, 1666
AclWI	GGATC	1 cut(s)	723
AcsI	RAATTY	2 cut(s)	395, 1228
AcuI	CTGAAG	3 cut(s)	590, 618, 1494
AfaI	GTAC	4 cut(s)	1405, 1511, 1542, 1599
AfiI	CCNNNNNNNGG	7 cut(s)	365, 457, 491, 516, 1421, 1617, 1618
AgeI	ACCGGT	1 cut(s)	491
AjnI	CCWGG	2 cut(s)	1150, 1736
Alw21I	GWGCWC	5 cut(s)	545, 874, 1401, 1883, 1945
Alw26I	GTCTC	3 cut(s)	11, 654, 1568
AlwI	GGATC	1 cut(s)	723
AoxI	GGCC	5 cut(s)	141, 163, 187, 885, 1148
ApeKI	GCWGC	4 cut(s)	569, 1741, 1769, 1772
ApoI	RAATTY	2 cut(s)	395, 1228
ArsI	GACNNNNNNTTYG	2 cut(s)	491, 523
AseI	ATTAAT	1 cut(s)	363
AsiGI	ACCGGT	1 cut(s)	491
Asp700I	GAANNNNTTC	2 cut(s)	603, 1230
Asp718I	GGTACC	1 cut(s)	1597
AspLEI	GCGC	3 cut(s)	51, 287, 1913
AspS9I	GGNCC	5 cut(s)	142, 507, 710, 786, 1919
AsuHPI	GGTGA	3 cut(s)	107, 452, 1436
AsuII	TTCGAA	1 cut(s)	399
AvaII	GGWCC	4 cut(s)	507, 710, 786, 1919
AxyI	CCTNAGG	1 cut(s)	1416
BanI	GGYRCC	1 cut(s)	1597
BanII	GRGCYC	4 cut(s)	545, 1401, 1883, 1945
BauI	CACGAG	3 cut(s)	651, 1764, 1882
BbsI	GAAGAC	1 cut(s)	606
Bbv12I	GWGCWC	5 cut(s)	545, 874, 1401, 1883, 1945
BbvI	GCAGC	4 cut(s)	556, 1753, 1756, 1759
BccI	CCATC	6 cut(s)	153, 179, 200, 308, 701, 1859
BcgI	CGANNNNNNTGC	2 cut(s)	1815, 1849
BciT130I	CCWGG	2 cut(s)	1152, 1738
BclI	TGATCA	1 cut(s)	1426
BcoDI	GTCTC	3 cut(s)	11, 654, 1568
BfaI	CTAG	2 cut(s)	861, 1538
BfmI	CTRYAG	1 cut(s)	1137
BfoI	RGCGCY	1 cut(s)	52
BglII	AGATCT	1 cut(s)	1315
BisI	GCNGC	5 cut(s)	141, 570, 1742, 1770, 1773
BlsI	GCNGC	5 cut(s)	142, 571, 1743, 1771, 1774
Bme1390I	CCNGG	2 cut(s)	1152, 1738
Bme18I	GGWCC	4 cut(s)	507, 710, 786, 1919
BmgT120I	GGNCC	5 cut(s)	142, 507, 710, 786, 1919
BmiI	GGNNCC	3 cut(s)	1548, 1599, 1735
BmrFI	CCNGG	2 cut(s)	1152, 1738
BmrI	ACTGGG	1 cut(s)	1352
BmsI	GCATC	3 cut(s)	132, 1595, 1736
BmuI	ACTGGG	1 cut(s)	1352
BpiI	GAAGAC	1 cut(s)	606
BplI	GAGNNNNNCTC	2 cut(s)	221, 253
Bpu14I	TTCGAA	1 cut(s)	399
BpuEI	CTTGAG	4 cut(s)	92, 1415, 1921, 1929
BsaBI	GATNNNNATC	1 cut(s)	1320
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	2 cut(s)	1174, 1708
BsaWI	WCCGGW	3 cut(s)	410, 491, 712
BsaXI	ACNNNNNCTCC	2 cut(s)	69, 99
Bsc4I	CCNNNNNNNGG	7 cut(s)	365, 457, 491, 516, 1421, 1617, 1618
Bse118I	RCCGGY	1 cut(s)	491
Bse1I	ACTGG	3 cut(s)	982, 1220, 1347
Bse21I	CCTNAGG	1 cut(s)	1416
Bse3DI	GCAATG	1 cut(s)	902
Bse8I	GATNNNNATC	1 cut(s)	1320
BseBI	CCWGG	2 cut(s)	1152, 1738
BseDI	CCNNGG	2 cut(s)	1174, 1708
BseGI	GGATG	5 cut(s)	211, 712, 1030, 1607, 1798
BseJI	GATNNNNATC	1 cut(s)	1320
BseLI	CCNNNNNNNGG	7 cut(s)	365, 457, 491, 516, 1421, 1617, 1618
BseMI	GCAATG	1 cut(s)	902
BseMII	CTCAG	4 cut(s)	50, 551, 659, 912
BseNI	ACTGG	3 cut(s)	982, 1220, 1347
BseRI	GAGGAG	4 cut(s)	182, 633, 1136, 1856
BseXI	GCAGC	4 cut(s)	556, 1753, 1756, 1759
BshFI	GGCC	5 cut(s)	143, 165, 189, 887, 1150
BshNI	GGYRCC	1 cut(s)	1597
BshTI	ACCGGT	1 cut(s)	491
BsiHKAI	GWGCWC	5 cut(s)	545, 874, 1401, 1883, 1945
BsiSI	CCGG	4 cut(s)	88, 411, 492, 713
BslFI	GGGAC	1 cut(s)	165
BslI	CCNNNNNNNGG	7 cut(s)	365, 457, 491, 516, 1421, 1617, 1618
BsmAI	GTCTC	3 cut(s)	11, 654, 1568
BsmFI	GGGAC	1 cut(s)	165
BsmI	GAATGC	1 cut(s)	38
BsnI	GGCC	5 cut(s)	143, 165, 189, 887, 1150
Bso31I	GGTCTC	1 cut(s)	11
Bsp119I	TTCGAA	1 cut(s)	399
Bsp1286I	GDGCHC	5 cut(s)	545, 874, 1401, 1883, 1945
Bsp143I	GATC	5 cut(s)	715, 1192, 1315, 1426, 1624
Bsp19I	CCATGG	1 cut(s)	1708
BspACI	CCGC	8 cut(s)	91, 121, 140, 221, 576, 623, 1571, 1666
BspANI	GGCC	5 cut(s)	143, 165, 189, 887, 1150
BspCNI	CTCAG	4 cut(s)	51, 550, 658, 913
BspLI	GGNNCC	3 cut(s)	1548, 1599, 1735
BspPI	GGATC	1 cut(s)	723
BspT104I	TTCGAA	1 cut(s)	399
BspT107I	GGYRCC	1 cut(s)	1597
BspTNI	GGTCTC	1 cut(s)	11
BsrDI	GCAATG	1 cut(s)	902
BsrFI	RCCGGY	1 cut(s)	491
BsrI	ACTGG	3 cut(s)	982, 1220, 1347
BssAI	RCCGGY	1 cut(s)	491
BssECI	CCNNGG	2 cut(s)	1174, 1708
BssMI	GATC	5 cut(s)	715, 1192, 1315, 1426, 1624
BssSI	CACGAG	3 cut(s)	651, 1764, 1882
BssT1I	CCWWGG	1 cut(s)	1708
Bst2BI	CACGAG	3 cut(s)	651, 1764, 1882
Bst2UI	CCWGG	2 cut(s)	1152, 1738
Bst4CI	ACNGT	8 cut(s)	22, 173, 507, 1013, 1509, 1833, 1850, 1927
Bst6I	CTCTTC	4 cut(s)	429, 548, 924, 1253
BstBI	TTCGAA	1 cut(s)	399
BstDEI	CTNAG	6 cut(s)	59, 537, 546, 645, 921, 1416
BstDSI	CCRYGG	1 cut(s)	1708
BstENI	CCTNNNNNAGG	1 cut(s)	1419
BstF5I	GGATG	5 cut(s)	211, 712, 1030, 1607, 1798
BstH2I	RGCGCY	1 cut(s)	52
BstHHI	GCGC	3 cut(s)	51, 287, 1913
BstKTI	GATC	5 cut(s)	718, 1195, 1318, 1429, 1627
BstMAI	GTCTC	3 cut(s)	11, 654, 1568
BstMBI	GATC	5 cut(s)	715, 1192, 1315, 1426, 1624
BstMWI	GCNNNNNNNGC	5 cut(s)	575, 1204, 1778, 1814, 1823
BstNI	CCWGG	2 cut(s)	1152, 1738
BstSCI	CCNGG	2 cut(s)	1150, 1736
BstSFI	CTRYAG	1 cut(s)	1137
BstV1I	GCAGC	4 cut(s)	556, 1753, 1756, 1759
BstV2I	GAAGAC	1 cut(s)	606
BstX2I	RGATCY	1 cut(s)	1315
BstYI	RGATCY	1 cut(s)	1315
Bsu36I	CCTNAGG	1 cut(s)	1416
BsuRI	GGCC	5 cut(s)	143, 165, 189, 887, 1150
BtgI	CCRYGG	1 cut(s)	1708
BtsCI	GGATG	5 cut(s)	211, 712, 1030, 1607, 1798
BtsI	GCAGTG	1 cut(s)	767
BtsIMutI	CAGTG	5 cut(s)	271, 767, 1018, 1227, 1932
CfoI	GCGC	3 cut(s)	51, 287, 1913
Cfr10I	RCCGGY	1 cut(s)	491
Cfr13I	GGNCC	5 cut(s)	142, 507, 710, 786, 1919
CseI	GACGC	1 cut(s)	952
Csp6I	GTAC	4 cut(s)	1404, 1510, 1541, 1598
CspAI	ACCGGT	1 cut(s)	491
CspCI	CAANNNNNGTGG	2 cut(s)	158, 193
CviAII	CATG	6 cut(s)	373, 1378, 1461, 1679, 1709, 1788
CviQI	GTAC	4 cut(s)	1404, 1510, 1541, 1598
DdeI	CTNAG	6 cut(s)	59, 537, 546, 645, 921, 1416
DpnI	GATC	5 cut(s)	717, 1194, 1317, 1428, 1626
DpnII	GATC	5 cut(s)	715, 1192, 1315, 1426, 1624
Eam1104I	CTCTTC	4 cut(s)	429, 548, 924, 1253
EarI	CTCTTC	4 cut(s)	429, 548, 924, 1253
EciI	GGCGGA	2 cut(s)	106, 210
Ecl136II	GAGCTC	4 cut(s)	543, 1399, 1881, 1943
Eco130I	CCWWGG	1 cut(s)	1708
Eco24I	GRGCYC	4 cut(s)	545, 1401, 1883, 1945
Eco31I	GGTCTC	1 cut(s)	11
Eco47I	GGWCC	4 cut(s)	507, 710, 786, 1919
Eco53kI	GAGCTC	4 cut(s)	543, 1399, 1881, 1943
Eco57I	CTGAAG	3 cut(s)	590, 618, 1494
Eco81I	CCTNAGG	1 cut(s)	1416
EcoICRI	GAGCTC	4 cut(s)	543, 1399, 1881, 1943
EcoNI	CCTNNNNNAGG	1 cut(s)	1419
EcoO109I	RGGNCCY	1 cut(s)	786
EcoRI	GAATTC	1 cut(s)	395
EcoRII	CCWGG	2 cut(s)	1150, 1736
EcoT14I	CCWWGG	1 cut(s)	1708
EcoT38I	GRGCYC	4 cut(s)	545, 1401, 1883, 1945
ErhI	CCWWGG	1 cut(s)	1708
FaeI	CATG	6 cut(s)	376, 1381, 1464, 1682, 1712, 1791
FaqI	GGGAC	1 cut(s)	165
FatI	CATG	6 cut(s)	372, 1377, 1460, 1678, 1708, 1787
FbaI	TGATCA	1 cut(s)	1426
FblI	GTMKAC	1 cut(s)	233
Fnu4HI	GCNGC	5 cut(s)	141, 570, 1742, 1770, 1773
FokI	GGATG	5 cut(s)	218, 719, 1037, 1594, 1805
FriOI	GRGCYC	4 cut(s)	545, 1401, 1883, 1945
Fsp4HI	GCNGC	5 cut(s)	141, 570, 1742, 1770, 1773
FspBI	CTAG	2 cut(s)	861, 1538
GlaI	GCGC	3 cut(s)	50, 286, 1912
GluI	GCNGC	5 cut(s)	141, 570, 1742, 1770, 1773
HaeII	RGCGCY	1 cut(s)	52
HaeIII	GGCC	5 cut(s)	143, 165, 189, 887, 1150
HapII	CCGG	4 cut(s)	88, 411, 492, 713
HgaI	GACGC	1 cut(s)	952
HhaI	GCGC	3 cut(s)	51, 287, 1913
Hin1II	CATG	6 cut(s)	376, 1381, 1464, 1682, 1712, 1791
Hin6I	GCGC	3 cut(s)	49, 285, 1911
HinP1I	GCGC	3 cut(s)	49, 285, 1911
HincII	GTYRAC	2 cut(s)	234, 995
HindII	GTYRAC	2 cut(s)	234, 995
HindIII	AAGCTT	3 cut(s)	377, 521, 1391
HpaII	CCGG	4 cut(s)	88, 411, 492, 713
HphI	GGTGA	3 cut(s)	107, 452, 1436
Hpy166II	GTNNAC	5 cut(s)	234, 443, 593, 995, 1186
Hpy188III	TCNNGA	6 cut(s)	182, 800, 1299, 1325, 1472, 1550
Hpy8I	GTNNAC	5 cut(s)	234, 443, 593, 995, 1186
Hpy99I	CGWCG	4 cut(s)	10, 13, 16, 879
HpyAV	CCTTC	6 cut(s)	614, 676, 919, 1010, 1415, 1816
HpyCH4III	ACNGT	8 cut(s)	22, 173, 507, 1013, 1509, 1833, 1850, 1927
HpyCH4IV	ACGT	2 cut(s)	877, 991
HpyCH4V	TGCA	5 cut(s)	302, 482, 1436, 1775, 1787
HpyF10VI	GCNNNNNNNGC	5 cut(s)	575, 1204, 1778, 1814, 1823
HpyF3I	CTNAG	6 cut(s)	59, 537, 546, 645, 921, 1416
HpySE526I	ACGT	2 cut(s)	877, 991
Hsp92II	CATG	6 cut(s)	376, 1381, 1464, 1682, 1712, 1791
HspAI	GCGC	3 cut(s)	49, 285, 1911
KpnI	GGTACC	1 cut(s)	1601
Ksp22I	TGATCA	1 cut(s)	1426
Kzo9I	GATC	5 cut(s)	715, 1192, 1315, 1426, 1624
LmnI	GCTCC	3 cut(s)	46, 93, 1878
Lsp1109I	GCAGC	4 cut(s)	556, 1753, 1756, 1759
LweI	GCATC	3 cut(s)	132, 1595, 1736
MaeI	CTAG	2 cut(s)	861, 1538
MaeII	ACGT	2 cut(s)	877, 991
MaeIII	GTNAC	4 cut(s)	933, 1046, 1304, 1503
MalI	GATC	5 cut(s)	717, 1194, 1317, 1428, 1626
MboI	GATC	5 cut(s)	715, 1192, 1315, 1426, 1624
MboII	GAAGA	9 cut(s)	446, 565, 611, 640, 941, 1270, 1325, 1634, 1641
MfeI	CAATTG	2 cut(s)	452, 947
MflI	RGATCY	1 cut(s)	1315
MhlI	GDGCHC	5 cut(s)	545, 874, 1401, 1883, 1945
MlyI	GAGTC	5 cut(s)	78, 239, 679, 1337, 1462
MmeI	TCCRAC	4 cut(s)	156, 1474, 1832, 1946
MroXI	GAANNNNTTC	2 cut(s)	603, 1230
MseI	TTAA	5 cut(s)	363, 561, 849, 1454, 1674
MslI	CAYNNNNRTG	1 cut(s)	200
MspI	CCGG	4 cut(s)	88, 411, 492, 713
MspR9I	CCNGG	2 cut(s)	1152, 1738
MunI	CAATTG	2 cut(s)	452, 947
Mva1269I	GAATGC	1 cut(s)	38
MvaI	CCWGG	2 cut(s)	1152, 1738
MwoI	GCNNNNNNNGC	5 cut(s)	575, 1204, 1778, 1814, 1823
NcoI	CCATGG	1 cut(s)	1708
NdeII	GATC	5 cut(s)	715, 1192, 1315, 1426, 1624
NlaIII	CATG	6 cut(s)	376, 1381, 1464, 1682, 1712, 1791
NlaIV	GGNNCC	3 cut(s)	1548, 1599, 1735
NmuCI	GTSAC	3 cut(s)	1046, 1304, 1503
NspV	TTCGAA	1 cut(s)	399
PctI	GAATGC	1 cut(s)	38
PdmI	GAANNNNTTC	2 cut(s)	603, 1230
PfeI	GAWTC	5 cut(s)	100, 428, 856, 1321, 1360
PflMI	CCANNNNNTGG	1 cut(s)	365
PinAI	ACCGGT	1 cut(s)	491
PkrI	GCNGC	5 cut(s)	142, 571, 1743, 1771, 1774
PleI	GAGTC	5 cut(s)	78, 238, 678, 1336, 1462
PpsI	GAGTC	5 cut(s)	78, 238, 678, 1336, 1462
PpuMI	RGGWCCY	1 cut(s)	786
PshBI	ATTAAT	1 cut(s)	363
Psp124BI	GAGCTC	4 cut(s)	545, 1401, 1883, 1945
Psp5II	RGGWCCY	1 cut(s)	786
Psp6I	CCWGG	2 cut(s)	1150, 1736
PspGI	CCWGG	2 cut(s)	1150, 1736
PspN4I	GGNNCC	3 cut(s)	1548, 1599, 1735
PspPI	GGNCC	5 cut(s)	142, 507, 710, 786, 1919
PspPPI	RGGWCCY	1 cut(s)	786
PsuI	RGATCY	1 cut(s)	1315
RsaI	GTAC	4 cut(s)	1405, 1511, 1542, 1599
RsaNI	GTAC	4 cut(s)	1404, 1510, 1541, 1598
RseI	CAYNNNNRTG	1 cut(s)	200
SacI	GAGCTC	4 cut(s)	545, 1401, 1883, 1945
SalI	GTCGAC	1 cut(s)	232
SaqAI	TTAA	5 cut(s)	363, 561, 849, 1454, 1674
SatI	GCNGC	5 cut(s)	141, 570, 1742, 1770, 1773
Sau3AI	GATC	5 cut(s)	715, 1192, 1315, 1426, 1624
Sau96I	GGNCC	5 cut(s)	142, 507, 710, 786, 1919
SchI	GAGTC	5 cut(s)	78, 239, 679, 1337, 1462
ScrFI	CCNGG	2 cut(s)	1152, 1738
SduI	GDGCHC	5 cut(s)	545, 874, 1401, 1883, 1945
SfaNI	GCATC	3 cut(s)	132, 1595, 1736
SfcI	CTRYAG	1 cut(s)	1137
SfuI	TTCGAA	1 cut(s)	399
SinI	GGWCC	4 cut(s)	507, 710, 786, 1919
SmiMI	CAYNNNNRTG	1 cut(s)	200
SmlI	CTYRAG	4 cut(s)	107, 1394, 1900, 1944
SmoI	CTYRAG	4 cut(s)	107, 1394, 1900, 1944
SsiI	CCGC	8 cut(s)	91, 121, 140, 221, 576, 623, 1571, 1666
SspMI	CTAG	2 cut(s)	861, 1538
SstI	GAGCTC	4 cut(s)	545, 1401, 1883, 1945
StyD4I	CCNGG	2 cut(s)	1150, 1736
StyI	CCWWGG	1 cut(s)	1708
TaaI	ACNGT	8 cut(s)	22, 173, 507, 1013, 1509, 1833, 1850, 1927
TaiI	ACGT	2 cut(s)	880, 994
TaqI	TCGA	6 cut(s)	233, 399, 874, 1350, 1386, 1746
TatI	WGTACW	1 cut(s)	1540
TauI	GCSGC	1 cut(s)	143
TfiI	GAWTC	5 cut(s)	100, 428, 856, 1321, 1360
Tru1I	TTAA	5 cut(s)	363, 561, 849, 1454, 1674
Tru9I	TTAA	5 cut(s)	363, 561, 849, 1454, 1674
TscAI	CASTG	5 cut(s)	271, 774, 1018, 1227, 1932
TseFI	GTSAC	3 cut(s)	1046, 1304, 1503
TseI	GCWGC	4 cut(s)	569, 1741, 1769, 1772
Tsp45I	GTSAC	3 cut(s)	1046, 1304, 1503
TspDTI	ATGAA	9 cut(s)	389, 816, 822, 858, 929, 1041, 1082, 1098, 1809
TspGWI	ACGGA	5 cut(s)	29, 608, 1065, 1121, 1203
TspRI	CASTG	5 cut(s)	271, 774, 1018, 1227, 1932
Van91I	CCANNNNNTGG	1 cut(s)	365
VpaK11BI	GGWCC	4 cut(s)	507, 710, 786, 1919
VspI	ATTAAT	1 cut(s)	363
XagI	CCTNNNNNAGG	1 cut(s)	1419
XapI	RAATTY	2 cut(s)	395, 1228
XmiI	GTMKAC	1 cut(s)	233
XmnI	GAANNNNTTC	2 cut(s)	603, 1230
XspI	CTAG	2 cut(s)	861, 1538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.