MD14G1093600.v1.1

Protein of unknown function (DUF668)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
13925182 .. 13928005
2824 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1093600.v1.1.491

Sequence Viewer

Length: 1731 bp
ATGGGGAGTGAGATCGTGTCTGAGTCCTGGTTAGGTAGTTTGAGGTTCTCATGGAGTCGTGTGGCGGAGGCTGACAAGCCGGTGATTGGCGTTCTGGCTTTTGAAGTTGCTGGGTTGATGTTAAAGGTGGTTGATTTATGGAATAGTGTGAGTGAGAATGAGATGCTTAGGTTGAGGGAAGAGGTTGTTTACTCTATTGGGGTCAGAAGGCTTGTGTCTGATGACGACTATTACTTGATGGAAATTGCACTGAATGAGATAATTGAGAATTTGGGATATCTGGCAGTGTCTGTTGTCAGGCTTGGGAAGAAGTGCACCGACCCTGTGTATCACTGTTTTGAAGAATTTTTTGATGACCCTGTGGAGAATGGTTTTCAGTGGCTTGGGTGGGAATACAAGTGGAAGAAAATGGAGAGGAAAGTGAAGAAAATGAAGAGATTTATTGAAGCAACAATGCAACTATCCCAGGAGCTGGAAGTGCTGGCGGAGCTTGAGCAAACTCTGAGGAGAATGCGCGCTAATCCTGATGTAAATCGGGTAAAATTGCTCGAGTTTCAACAGAAGGTAATGTGGCGGCGTCAAGAAGTAAAAGGTTTACAAGAGATGTCTCCATGGAGTAGAACATATGATTACACTGTCCGACTTTTGGCAAGATCCCTTTTTACAATGTTAGATAGGATAAAGTTTGTCTTTGGATTTCATCAAATGGCTTTGGGAGAGGGAATGGATAGCTCTGAAGTTATCAATTCTGTTTGTCTTTCTCGCAGTCATTCATTTTCTGCTCTTATGCACTCTTCTGTTCATCCATCTGATGGTAATCTATGTGGGTCTGGACCTCTTGGGAGGTCGCTTGCAAAGACGAGGCTTAATGCTCGCAAGAATAGAACAAACAACCAGCGGCAAGCTCATCACCAGTCATCCATCCAACATGGAAGTTACTCCCAACTAAAACCCAAACGGTTTGCTCATCTTGGTCCGTTTAAAGGATGCATGATGGGTGGAAGTAATTCTCCTGTTTTTGAGAGCTGCAAGCCTGAAATGGGTGGTTCTATGAGGTTGAGAAGTACGGGTATCAAACATTTTGATAGCTTAAAGTACACACATATGGGATCCCAATCTTTCAGTCATGGCATCTATTCTAAACTATCCCTGTTCAATTCAAAATGTACACTACTGAATGCTCCGCCATCTACCCTTGGCGATGCTGCTCTAGCGCTCCATTACGCACATGTGATTGTTTTGATTGAAAAGATAGCTTCATCACCTCACTTGATCAGCCTTGACGAAAGATCTAATCTTTACAACATGTTGACCACAACTATAAGGACTGCTCTGAGAGCTAGACTGAAGTCATATGCCAAAACTACGGGATCATCTGTCTACAATCCTGACCTTGCAGGAGAGTGGAATCTGGCGATGGAGCAGATCTTGGAATGGCTTGCTCCACTAGCCCATAACATGATACGTTGGCATTCTGACCGCAAAATTATGAAGCAGCAGGAAGTTTCCAAGACGAATGTGCTTCTGGTCCAGACCCTCTACTTTGCAAGTCAGGCTAAAACTGAAGCTGCAATTACAGAGCTTCTCATAGGTCTGAACTACATGTGCATGGTTGACGAACTTAATAGGAAGGCTTTGCGAGACGCTGGTGGCAGCCGACCATACGATGATTATATGCTCAAACGGGATGAAATTTCTCAAGAAATTCTGGAGACGGCAATAGCGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

577

Amino Acids

65.7

Weight (kDa)

8.94

Isoelectric Point (pI)

52.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3475 PF11961 31 - 87 8e-23 Domain of unknown function (DUF3475)
DUF668 PF05003 398 - 489 2.5e-31 Protein of unknown function (DUF668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 472, 812
AccI GTMKAC 1 cut(s) 1380
AccII CGCG 1 cut(s) 516
AciI CCGC 6 cut(s) 65, 485, 574, 898, 1184, 1480
AclWI GGATC 4 cut(s) 648, 1104, 1117, 1378
AcsI RAATTY 4 cut(s) 268, 344, 1692, 1704
AcuI CTGAAG 3 cut(s) 756, 1367, 1584
AcyI GRCGYC 1 cut(s) 577
AfaI GTAC 3 cut(s) 1066, 1097, 1168
AfeI AGCGCT 1 cut(s) 1215
AfiI CCNNNNNNNGG 6 cut(s) 86, 472, 646, 812, 983, 1040
AflIII ACRYGT 3 cut(s) 1228, 1305, 1602
AgsI TTSAA 7 cut(s) 104, 341, 446, 557, 1156, 1161, 1247
AjnI CCWGG 2 cut(s) 26, 465
Alw21I GWGCWC 1 cut(s) 317
Alw26I GTCTC 3 cut(s) 612, 1635, 1706
Alw44I GTGCAC 1 cut(s) 313
AlwI GGATC 4 cut(s) 648, 1104, 1117, 1378
AlwNI CAGNNNCTG 2 cut(s) 290, 472
Ama87I CYCGRG 1 cut(s) 548
Aor51HI AGCGCT 1 cut(s) 1215
ApaLI GTGCAC 1 cut(s) 313
ApeKI GCWGC 5 cut(s) 1026, 1205, 1495, 1568, 1653
ApoI RAATTY 4 cut(s) 268, 344, 1692, 1704
Asp700I GAANNNNTTC 1 cut(s) 1006
AspLEI GCGC 3 cut(s) 516, 518, 1216
AspS9I GGNCC 3 cut(s) 833, 974, 1528
AsuHPI GGTGA 3 cut(s) 94, 902, 1254
AvaI CYCGRG 1 cut(s) 548
AvaII GGWCC 3 cut(s) 833, 974, 1528
BaeGI GKGCMC 1 cut(s) 317
BamHI GGATCC 1 cut(s) 1109
Bbv12I GWGCWC 1 cut(s) 317
BbvI GCAGC 5 cut(s) 1013, 1192, 1507, 1555, 1665
BccI CCATC 7 cut(s) 232, 806, 814, 929, 988, 1195, 1411
BciT130I CCWGG 2 cut(s) 28, 467
BclI TGATCA 1 cut(s) 1272
BcoDI GTCTC 3 cut(s) 612, 1635, 1706
BfaI CTAG 3 cut(s) 1211, 1341, 1448
BfoI RGCGCY 1 cut(s) 1217
BglII AGATCT 2 cut(s) 1289, 1425
BisI GCNGC 7 cut(s) 575, 899, 1027, 1206, 1496, 1569, 1654
BlsI GCNGC 7 cut(s) 576, 900, 1028, 1207, 1497, 1570, 1655
Bme1390I CCNGG 2 cut(s) 28, 467
Bme18I GGWCC 3 cut(s) 833, 974, 1528
BmeT110I CYCGRG 1 cut(s) 548
BmgT120I GGNCC 3 cut(s) 833, 974, 1528
BmiI GGNNCC 1 cut(s) 1111
BmrFI CCNGG 2 cut(s) 28, 467
BmsI GCATC 4 cut(s) 153, 977, 1140, 1192
BoxI GACNNNNGTC 1 cut(s) 1348
BpmI CTGGAG 1 cut(s) 1730
Bpu10I CCTNAGC 1 cut(s) 167
BpuEI CTTGAG 2 cut(s) 512, 1683
BsaBI GATNNNNATC 3 cut(s) 531, 816, 1114
BsaHI GRCGYC 1 cut(s) 577
BsaJI CCNNGG 3 cut(s) 465, 611, 1195
Bsc4I CCNNNNNNNGG 6 cut(s) 86, 472, 646, 812, 983, 1040
Bse118I RCCGGY 1 cut(s) 79
Bse1I ACTGG 1 cut(s) 913
Bse8I GATNNNNATC 3 cut(s) 531, 816, 1114
BseBI CCWGG 2 cut(s) 28, 467
BseDI CCNNGG 3 cut(s) 465, 611, 1195
BseGI GGATG 5 cut(s) 802, 917, 921, 992, 1693
BseJI GATNNNNATC 3 cut(s) 531, 816, 1114
BseLI CCNNNNNNNGG 6 cut(s) 86, 472, 646, 812, 983, 1040
BseMII CTCAG 3 cut(s) 12, 494, 1325
BseNI ACTGG 1 cut(s) 913
BsePI GCGCGC 1 cut(s) 514
BseRI GAGGAG 1 cut(s) 520
BseSI GKGCMC 1 cut(s) 317
BseXI GCAGC 5 cut(s) 1013, 1192, 1507, 1555, 1665
BseYI CCCAGC 1 cut(s) 110
Bsh1236I CGCG 1 cut(s) 516
BsiHKAI GWGCWC 1 cut(s) 317
BsiHKCI CYCGRG 1 cut(s) 548
BsiSI CCGG 1 cut(s) 80
BslI CCNNNNNNNGG 6 cut(s) 86, 472, 646, 812, 983, 1040
BsmAI GTCTC 3 cut(s) 612, 1635, 1706
BsmBI CGTCTC 2 cut(s) 1635, 1706
BsmI GAATGC 3 cut(s) 516, 1183, 1471
BsoBI CYCGRG 1 cut(s) 548
Bsp1286I GDGCHC 1 cut(s) 317
Bsp1407I TGTACA 1 cut(s) 1166
Bsp143I GATC 7 cut(s) 12, 653, 1109, 1272, 1289, 1370, 1425
Bsp19I CCATGG 1 cut(s) 611
BspACI CCGC 6 cut(s) 65, 485, 574, 898, 1184, 1480
BspCNI CTCAG 3 cut(s) 13, 495, 1326
BspFNI CGCG 1 cut(s) 516
BspLI GGNNCC 1 cut(s) 1111
BspPI GGATC 4 cut(s) 648, 1104, 1117, 1378
BsrFI RCCGGY 1 cut(s) 79
BsrGI TGTACA 1 cut(s) 1166
BsrI ACTGG 1 cut(s) 913
BssAI RCCGGY 1 cut(s) 79
BssECI CCNNGG 3 cut(s) 465, 611, 1195
BssHII GCGCGC 1 cut(s) 514
BssMI GATC 7 cut(s) 12, 653, 1109, 1272, 1289, 1370, 1425
BssNI GRCGYC 1 cut(s) 577
BssT1I CCWWGG 2 cut(s) 611, 1195
Bst2UI CCWGG 2 cut(s) 28, 467
Bst4CI ACNGT 3 cut(s) 335, 637, 960
Bst6I CTCTTC 3 cut(s) 174, 428, 799
BstACI GRCGYC 1 cut(s) 577
BstAUI TGTACA 1 cut(s) 1166
BstC8I GCNNGC 7 cut(s) 483, 516, 852, 874, 903, 1031, 1440
BstDEI CTNAG 4 cut(s) 21, 167, 503, 1334
BstDSI CCRYGG 1 cut(s) 611
BstF5I GGATG 5 cut(s) 802, 917, 921, 992, 1693
BstFNI CGCG 1 cut(s) 516
BstH2I RGCGCY 1 cut(s) 1217
BstHHI GCGC 3 cut(s) 516, 518, 1216
BstKTI GATC 7 cut(s) 15, 656, 1112, 1275, 1292, 1373, 1428
BstMAI GTCTC 3 cut(s) 612, 1635, 1706
BstMBI GATC 7 cut(s) 12, 653, 1109, 1272, 1289, 1370, 1425
BstMWI GCNNNNNNNGC 6 cut(s) 478, 487, 1211, 1337, 1448, 1553
BstNI CCWGG 2 cut(s) 28, 467
BstNSI RCATGY 3 cut(s) 1232, 1309, 1606
BstPAI GACNNNNGTC 1 cut(s) 1348
BstSCI CCNGG 2 cut(s) 26, 465
BstSLI GKGCMC 1 cut(s) 317
BstUI CGCG 1 cut(s) 516
BstV1I GCAGC 5 cut(s) 1013, 1192, 1507, 1555, 1665
BstX2I RGATCY 4 cut(s) 653, 1109, 1289, 1425
BstYI RGATCY 4 cut(s) 653, 1109, 1289, 1425
BtgI CCRYGG 1 cut(s) 611
BtgZI GCGATG 2 cut(s) 1215, 1430
BtsCI GGATG 5 cut(s) 802, 917, 921, 992, 1693
BtsI GCAGTG 1 cut(s) 291
BtsIMutI CAGTG 5 cut(s) 248, 291, 331, 383, 633
Cac8I GCNNGC 7 cut(s) 483, 516, 852, 874, 903, 1031, 1440
CaiI CAGNNNCTG 2 cut(s) 290, 472
CfoI GCGC 3 cut(s) 516, 518, 1216
Cfr10I RCCGGY 1 cut(s) 79
Cfr13I GGNCC 3 cut(s) 833, 974, 1528
CseI GACGC 2 cut(s) 566, 1652
Csp6I GTAC 3 cut(s) 1065, 1096, 1167
CviQI GTAC 3 cut(s) 1065, 1096, 1167
DdeI CTNAG 4 cut(s) 21, 167, 503, 1334
DpnI GATC 7 cut(s) 14, 655, 1111, 1274, 1291, 1372, 1427
DpnII GATC 7 cut(s) 12, 653, 1109, 1272, 1289, 1370, 1425
DraI TTTAAA 1 cut(s) 982
Eam1104I CTCTTC 3 cut(s) 174, 428, 799
EarI CTCTTC 3 cut(s) 174, 428, 799
EciI GGCGGA 3 cut(s) 80, 500, 1173
Eco130I CCWWGG 2 cut(s) 611, 1195
Eco32I GATATC 1 cut(s) 278
Eco47I GGWCC 3 cut(s) 833, 974, 1528
Eco47III AGCGCT 1 cut(s) 1215
Eco57I CTGAAG 3 cut(s) 756, 1367, 1584
Eco88I CYCGRG 1 cut(s) 548
EcoRII CCWGG 2 cut(s) 26, 465
EcoRV GATATC 1 cut(s) 278
EcoT14I CCWWGG 2 cut(s) 611, 1195
EcoT22I ATGCAT 1 cut(s) 992
ErhI CCWWGG 2 cut(s) 611, 1195
Esp3I CGTCTC 2 cut(s) 1635, 1706
FalI AAGNNNNNCTT 2 cut(s) 674, 706
FauNDI CATATG 3 cut(s) 625, 1104, 1354
FbaI TGATCA 1 cut(s) 1272
FblI GTMKAC 1 cut(s) 1380
Fnu4HI GCNGC 7 cut(s) 575, 899, 1027, 1206, 1496, 1569, 1654
FokI GGATG 5 cut(s) 789, 904, 908, 999, 1700
Fsp4HI GCNGC 7 cut(s) 575, 899, 1027, 1206, 1496, 1569, 1654
FspBI CTAG 3 cut(s) 1211, 1341, 1448
GlaI GCGC 3 cut(s) 515, 517, 1215
GluI GCNGC 7 cut(s) 575, 899, 1027, 1206, 1496, 1569, 1654
GsaI CCCAGC 1 cut(s) 114
GsuI CTGGAG 1 cut(s) 1730
HaeII RGCGCY 1 cut(s) 1217
HapII CCGG 1 cut(s) 80
HgaI GACGC 2 cut(s) 566, 1652
HhaI GCGC 3 cut(s) 516, 518, 1216
Hin1I GRCGYC 1 cut(s) 577
Hin6I GCGC 3 cut(s) 514, 516, 1214
HinP1I GCGC 3 cut(s) 514, 516, 1214
HincII GTYRAC 2 cut(s) 1311, 1615
HindII GTYRAC 2 cut(s) 1311, 1615
HinfI GANTC 3 cut(s) 23, 55, 1408
HpaII CCGG 1 cut(s) 80
HphI GGTGA 3 cut(s) 94, 902, 1254
Hpy166II GTNNAC 8 cut(s) 190, 315, 596, 1098, 1169, 1311, 1381, 1615
Hpy188III TCNNGA 7 cut(s) 524, 581, 831, 1388, 1531, 1700, 1709
Hpy8I GTNNAC 8 cut(s) 190, 315, 596, 1098, 1169, 1311, 1381, 1615
HpyAV CCTTC 3 cut(s) 201, 556, 1624
HpyCH4III ACNGT 3 cut(s) 335, 637, 960
HpyCH4IV ACGT 1 cut(s) 1465
HpyF10VI GCNNNNNNNGC 6 cut(s) 478, 487, 1211, 1337, 1448, 1553
HpyF3I CTNAG 4 cut(s) 21, 167, 503, 1334
HpySE526I ACGT 1 cut(s) 1465
Hsp92I GRCGYC 1 cut(s) 577
HspAI GCGC 3 cut(s) 514, 516, 1214
Ksp22I TGATCA 1 cut(s) 1272
Kzo9I GATC 7 cut(s) 12, 653, 1109, 1272, 1289, 1370, 1425
LmnI GCTCC 6 cut(s) 469, 487, 1186, 1221, 1420, 1447
Lsp1109I GCAGC 5 cut(s) 1013, 1192, 1507, 1555, 1665
LweI GCATC 4 cut(s) 153, 977, 1140, 1192
MaeI CTAG 3 cut(s) 1211, 1341, 1448
MaeII ACGT 1 cut(s) 1465
MaeIII GTNAC 1 cut(s) 935
MalI GATC 7 cut(s) 14, 655, 1111, 1274, 1291, 1372, 1427
MboI GATC 7 cut(s) 12, 653, 1109, 1272, 1289, 1370, 1425
MboII GAAGA 7 cut(s) 191, 319, 353, 415, 436, 445, 786
MflI RGATCY 4 cut(s) 653, 1109, 1289, 1425
MhlI GDGCHC 1 cut(s) 317
MlyI GAGTC 2 cut(s) 32, 64
MmeI TCCRAC 2 cut(s) 664, 949
Mph1103I ATGCAT 1 cut(s) 992
MroXI GAANNNNTTC 1 cut(s) 1006
MseI TTAA 5 cut(s) 122, 867, 981, 1091, 1623
MslI CAYNNNNRTG 2 cut(s) 1103, 1607
MspA1I CMGCKG 1 cut(s) 898
MspI CCGG 1 cut(s) 80
MspR9I CCNGG 2 cut(s) 28, 467
Mva1269I GAATGC 3 cut(s) 516, 1183, 1471
MvaI CCWGG 2 cut(s) 28, 467
MvnI CGCG 1 cut(s) 516
MwoI GCNNNNNNNGC 6 cut(s) 478, 487, 1211, 1337, 1448, 1553
NcoI CCATGG 1 cut(s) 611
NdeI CATATG 3 cut(s) 625, 1104, 1354
NdeII GATC 7 cut(s) 12, 653, 1109, 1272, 1289, 1370, 1425
NlaIV GGNNCC 1 cut(s) 1111
NsiI ATGCAT 1 cut(s) 992
NspI RCATGY 3 cut(s) 1232, 1309, 1606
PaeR7I CTCGAG 1 cut(s) 548
PauI GCGCGC 1 cut(s) 514
PciI ACATGT 3 cut(s) 1228, 1305, 1602
PcsI WCGNNNNNNNCGW 1 cut(s) 1721
PctI GAATGC 3 cut(s) 516, 1183, 1471
PdmI GAANNNNTTC 1 cut(s) 1006
PfeI GAWTC 1 cut(s) 1408
PflMI CCANNNNNTGG 2 cut(s) 472, 812
PkrI GCNGC 7 cut(s) 576, 900, 1028, 1207, 1497, 1570, 1655
PleI GAGTC 2 cut(s) 31, 63
PpsI GAGTC 2 cut(s) 31, 63
PscI ACATGT 3 cut(s) 1228, 1305, 1602
PshAI GACNNNNGTC 1 cut(s) 1348
Psp6I CCWGG 2 cut(s) 26, 465
PspFI CCCAGC 1 cut(s) 110
PspGI CCWGG 2 cut(s) 26, 465
PspN4I GGNNCC 1 cut(s) 1111
PspPI GGNCC 3 cut(s) 833, 974, 1528
PspXI VCTCGAGB 1 cut(s) 548
PstNI CAGNNNCTG 2 cut(s) 290, 472
PsuI RGATCY 4 cut(s) 653, 1109, 1289, 1425
PteI GCGCGC 1 cut(s) 514
RsaI GTAC 3 cut(s) 1066, 1097, 1168
RsaNI GTAC 3 cut(s) 1065, 1096, 1167
RseI CAYNNNNRTG 2 cut(s) 1103, 1607
SaqAI TTAA 5 cut(s) 122, 867, 981, 1091, 1623
SatI GCNGC 7 cut(s) 575, 899, 1027, 1206, 1496, 1569, 1654
Sau3AI GATC 7 cut(s) 12, 653, 1109, 1272, 1289, 1370, 1425
Sau96I GGNCC 3 cut(s) 833, 974, 1528
SchI GAGTC 2 cut(s) 32, 64
ScrFI CCNGG 2 cut(s) 28, 467
SduI GDGCHC 1 cut(s) 317
SfaNI GCATC 4 cut(s) 153, 977, 1140, 1192
Sfr274I CTCGAG 1 cut(s) 548
SinI GGWCC 3 cut(s) 833, 974, 1528
SlaI CTCGAG 1 cut(s) 548
SmiMI CAYNNNNRTG 2 cut(s) 1103, 1607
SmlI CTYRAG 3 cut(s) 491, 548, 1698
SmoI CTYRAG 3 cut(s) 491, 548, 1698
SsiI CCGC 6 cut(s) 65, 485, 574, 898, 1184, 1480
SspMI CTAG 3 cut(s) 1211, 1341, 1448
StyD4I CCNGG 2 cut(s) 26, 465
StyI CCWWGG 2 cut(s) 611, 1195
TaaI ACNGT 3 cut(s) 335, 637, 960
TaiI ACGT 1 cut(s) 1468
TaqI TCGA 1 cut(s) 549
TatI WGTACW 2 cut(s) 1095, 1166
TauI GCSGC 2 cut(s) 577, 901
TfiI GAWTC 1 cut(s) 1408
Tru1I TTAA 5 cut(s) 122, 867, 981, 1091, 1623
Tru9I TTAA 5 cut(s) 122, 867, 981, 1091, 1623
TscAI CASTG 5 cut(s) 255, 291, 338, 383, 640
TseI GCWGC 5 cut(s) 1026, 1205, 1495, 1568, 1653
TspDTI ATGAA 7 cut(s) 446, 689, 762, 791, 1248, 1505, 1704
TspGWI ACGGA 1 cut(s) 966
TspRI CASTG 5 cut(s) 255, 291, 338, 383, 640
Van91I CCANNNNNTGG 2 cut(s) 472, 812
VneI GTGCAC 1 cut(s) 313
VpaK11BI GGWCC 3 cut(s) 833, 974, 1528
XapI RAATTY 4 cut(s) 268, 344, 1692, 1704
XceI RCATGY 3 cut(s) 1232, 1309, 1606
XhoI CTCGAG 1 cut(s) 548
XmiI GTMKAC 1 cut(s) 1380
XmnI GAANNNNTTC 1 cut(s) 1006
XspI CTAG 3 cut(s) 1211, 1341, 1448
Zsp2I ATGCAT 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.