MD14G1188900.v1.1

Microtubule-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0010759
Physical Location & Seq
Forward (+)
28066009 .. 28069157
3149 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1188900.v1.1.491

Sequence Viewer

Length: 1860 bp
ATGCCTCCCGCCCAGAACCTCAAGCACCGGGTCTTCATCTGCCTGAATAAGCTCTCCGACCGCGACACTTACTCCCTCGCAGCTTCCGAACTCGAATCCATAGCCCGAACCCTCGACCCGGCGTCCGTACCAGTTTTCCTCTCCTGCATCCAGTCCACCGACGCCTCCGACAAGTCTCCTGTCCGCCGACAATGCGTCCAGATGATCACAGTCCTTTCCGAAACCCACGGCGACTCGCTGTCCCCGCACCTCACCAAAATGCTCAACAGCATCACCAAGCGCCTCCGCGACCCGGACTCCGCTGTCCGATCCGCCTGCCAAACCGCCGTCGCTTCCCTCTCCTGCCATGTCACCAAGCCCTCTTCTTTCGGCTCTTTTCTGAAGCCGTTAACCGACGCGCTTTTCACGGAGCAGGACCCGAACTCGCAGATCGGGTCGGCCCTCTGCCTGGCGTCGGGAATCGACGCCGCGCCTGACCCGGAACCCTCGAAGCTGGCGAGGCTGCTGCCTAAGCTCGAAAAGCTGGTAAAGTGCGACGGGTATAAAGCGAAGCCGGCGGTGCTGACGTTGATCGGGTCGGTGATCGGGTCGGGCGGGGCGTCGGGTCACGGAGCTTTGAGGAGCTTGGTTCCTTGCCTCGTCGGGTTCCTGAGCAGCGAGGACTGGGCCGCGAGGAAGGCCGCGGCGGAAGCGCTGCTCAAGCTGGCGGTTGTGGAGAGAGACGAGTTGTCGGAGTTCAAATCTGGGTCTTTGAGAACGTTCGAGAGTCGGAAGTTCGATAAGGTGAAGGGTGTTAGGGAGGTTATGAATCAGATGATGGAAGCATGGAAGCACATTCCTGATCTCTCCGATGAGGCTTCGCCGCCGCCGCAATCGATTGCTTCCTCCAAAGAGAATGCAGGTGATGGACGCCAGCCGGTTAGGTCCAGAAACTGCGAGGTTCCTGGTTCCGGAGCTCGCCAATTGAAGAAGAAACCTACTCCGGCTAGTAGATCAACTCCGCCTGATAGTTCTTATGCTACCACTGATAGGAACAGAAGTACTTTGAAGAGTAATGACAAGAAAGTGAATCCAGGAATGTTTCGGAAACCAGGTCATAAGAAGCCTTCGGATTGGGAAGCTGAGATTAGCGCGCTTAGCGCTCCCTCATCGGCTGGGGCTTTTAACGACGGTTTTAAGGAGACGGATGAGAATATCCCAGAAAGAAGGATCAACGGGAACACAAAACGGGCCTTGTTCCATAGGAGTTCCGATAACAAAGTGCACAAATTTGGTGGGTCAAGGTCAGGATCTCGTGTGGCTCCATATCATGAGGAGAGAGCGGAATCTCCCGTTGTAGTCAGTAATGTTACCGAGAATAGTCATAAGAACCGCAGAGAATGCGAGGATTTATCCCTGATCCGCAATCAACTTCTTCAGATTGAAAAGCAGCAGTCCAGTTTACTTGATCTCGTGCAGAACTTCATGGGTAGCTCGCAAACTGGAATGCGTTCGTTGGAGACGCGTGTGCATGGGCTAGAGCTAGCGCTGGATGGGATCTCATATGATTTGGCTCTGTCAAGTGGAAGGATGACCAAGGTTGAATCACGCCGCAGCTCATGTTGCCTGCTACCTGGTGCCGATTTTTGGAGTTCCAAGTTCTGGAGGAAAACGGAAGGCAGGTACTCAACCTCAAGGTATCCTAATTCCTGTGGCATTGCTCCGGCAGCAGCTATGCGCTACACAGCCGATGACAGTGGCAATGCTGAAACATCGGAGAGCCTTAGGTTTCCGCTCCAGGATAGGAGTGGATTCATCGTAAACCCTTTGGCAGAGATTCGGAGTGGCTCAAGGGGTGTATCAGAAATGGCACGTCGCTAG

Protein Analysis

620

Amino Acids

67.48

Weight (kDa)

9.23

Isoelectric Point (pI)

59.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TOR1L1_N PF24714 6 - 277 2.1e-113 TORTIFOLIA1 N-terminal
HEAT_ECM29 PF24492 31 - 133 7.3e-07 Proteasome adapter and scaffold protein ECM29, HEAT-repeat domain
HEAT_EF3_N PF24987 55 - 173 1.7e-06 EF3 N-terminal HEAT repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010759)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62580 AT5G62580
fragaria_vesca FvH4_5g16200 FvH4_5g16200 FvH4_5g16200 FvH4_5g16200
malus_domestica MD06G1183000.v1.1 MD14G1188900.v1.1
prunus_persica Prupe.5G181300_v2.0.a1
pyrus_communis pycom06g16200
rosa_chinensis RchiOBHm_Chr7g0179911
rosa_laevigata RLG00000005310
rosa_multiflora Rmu_sc0012773.1_g000008
rosa_roxburghii Rroxscaffold_3G00273320
rosa_rugosa Rorug06G0429200
rosa_samantha Rh7AG029300 Rh7BG028500 Rh7CG030200 Rh7DG029600
rosa_wichuraiana Rw7G002350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 890
AasI GACNNNNNNGTC 1 cut(s) 302
Acc36I ACCTGC 2 cut(s) 890, 1650
AccB1I GGYRCC 1 cut(s) 1616
AccB7I CCANNNNNTGG 1 cut(s) 1641
AccBSI CCGCTC 2 cut(s) 1322, 1774
AccII CGCG 8 cut(s) 63, 288, 398, 470, 671, 683, 1133, 1504
AccIII TCCGGA 1 cut(s) 950
AclI AACGTT 1 cut(s) 758
AclWI GGATC 5 cut(s) 303, 1217, 1297, 1393, 1544
AcsI RAATTY 1 cut(s) 1268
AcuI CTGAAG 2 cut(s) 401, 1400
AcyI GRCGYC 6 cut(s) 122, 162, 452, 465, 599, 910
AfaI GTAC 3 cut(s) 129, 1042, 1664
AfeI AGCGCT 3 cut(s) 693, 1141, 1527
AfiI CCNNNNNNNGG 8 cut(s) 118, 292, 448, 454, 950, 1029, 1626, 1641
AflIII ACRYGT 1 cut(s) 1502
AgsI TTSAA 5 cut(s) 739, 967, 1048, 1424, 1583
AhdI GACNNNNNGTC 4 cut(s) 121, 194, 238, 727
AjiI CACGTC 1 cut(s) 1853
AjnI CCWGG 6 cut(s) 447, 943, 1072, 1090, 1612, 1776
Alw21I GWGCWC 2 cut(s) 958, 1266
Alw26I GTCTC 4 cut(s) 180, 714, 1175, 1493
Alw44I GTGCAC 1 cut(s) 1262
AlwI GGATC 5 cut(s) 303, 1217, 1297, 1393, 1544
AlwNI CAGNNNCTG 1 cut(s) 933
Aor13HI TCCGGA 1 cut(s) 950
Aor51HI AGCGCT 3 cut(s) 693, 1141, 1527
AoxI GGCC 4 cut(s) 438, 666, 678, 1230
ApaLI GTGCAC 1 cut(s) 1262
ApeKI GCWGC 9 cut(s) 80, 502, 505, 654, 694, 1429, 1593, 1706, 1709
ApoI RAATTY 1 cut(s) 1268
Asp700I GAANNNNTTC 1 cut(s) 1489
AspLEI GCGC 9 cut(s) 282, 400, 472, 694, 1133, 1135, 1142, 1528, 1719
AspS9I GGNCC 5 cut(s) 415, 439, 666, 924, 1230
AsuC2I CCSGG 4 cut(s) 29, 119, 293, 479
AsuHPI GGTGA 6 cut(s) 244, 265, 343, 592, 796, 914
AsuNHI GCTAGC 1 cut(s) 1522
AvaII GGWCC 2 cut(s) 415, 924
AxyI CCTNAGG 1 cut(s) 1763
BaeGI GKGCMC 1 cut(s) 1266
BanI GGYRCC 1 cut(s) 1616
BanII GRGCYC 1 cut(s) 958
BauI CACGAG 2 cut(s) 1293, 1451
BbsI GAAGAC 1 cut(s) 25
Bbv12I GWGCWC 2 cut(s) 958, 1266
BbvI GCAGC 9 cut(s) 92, 489, 492, 666, 681, 1441, 1605, 1718, 1721
BccI CCATC 3 cut(s) 811, 899, 1526
BceAI ACGGC 3 cut(s) 244, 311, 370
BcgI CGANNNNNNTGC 4 cut(s) 297, 331, 487, 521
BciT130I CCWGG 6 cut(s) 449, 945, 1074, 1092, 1614, 1778
BciVI GTATCC 1 cut(s) 1689
BclI TGATCA 1 cut(s) 204
BcnI CCSGG 4 cut(s) 29, 119, 293, 479
BcoDI GTCTC 4 cut(s) 180, 714, 1175, 1493
BfaI CTAG 4 cut(s) 987, 1517, 1523, 1858
BfoI RGCGCY 4 cut(s) 283, 695, 1143, 1529
BfuAI ACCTGC 2 cut(s) 890, 1650
BfuI GTATCC 1 cut(s) 1689
BlpI GCTNAGC 1 cut(s) 1136
BmcAI AGTACT 1 cut(s) 1042
Bme18I GGWCC 2 cut(s) 415, 924
BmeRI GACNNNNNGTC 4 cut(s) 121, 194, 238, 727
BmgBI CACGTC 1 cut(s) 1853
BmgT120I GGNCC 5 cut(s) 415, 439, 666, 924, 1230
BmiI GGNNCC 8 cut(s) 417, 483, 630, 647, 942, 949, 1302, 1618
BmrI ACTGGG 1 cut(s) 673
BmsI GCATC 2 cut(s) 156, 279
BmtI GCTAGC 1 cut(s) 1526
BmuI ACTGGG 1 cut(s) 673
BpiI GAAGAC 1 cut(s) 25
BpmI CTGGAG 2 cut(s) 1663, 1760
Bpu10I CCTNAGC 2 cut(s) 510, 650
Bpu1102I GCTNAGC 1 cut(s) 1136
BpuEI CTTGAG 4 cut(s) 5, 683, 1657, 1813
BpuMI CCSGG 4 cut(s) 29, 119, 293, 479
Bsa29I ATCGAT 1 cut(s) 875
BsaHI GRCGYC 6 cut(s) 122, 162, 452, 465, 599, 910
BsaJI CCNNGG 3 cut(s) 226, 681, 1575
BsaWI WCCGGW 1 cut(s) 950
BsaXI ACNNNNNCTCC 4 cut(s) 56, 86, 281, 311
Bsc4I CCNNNNNNNGG 8 cut(s) 118, 292, 448, 454, 950, 1029, 1626, 1641
Bse118I RCCGGY 2 cut(s) 553, 916
Bse1I ACTGG 5 cut(s) 131, 151, 668, 1437, 1486
Bse21I CCTNAGG 1 cut(s) 1763
Bse3DI GCAATG 2 cut(s) 1695, 1747
BseAI TCCGGA 1 cut(s) 950
BseBI CCWGG 6 cut(s) 449, 945, 1074, 1092, 1614, 1778
BseCI ATCGAT 1 cut(s) 875
BseDI CCNNGG 3 cut(s) 226, 681, 1575
BseGI GGATG 4 cut(s) 147, 1192, 1537, 1575
BseLI CCNNNNNNNGG 8 cut(s) 118, 292, 448, 454, 950, 1029, 1626, 1641
BseMI GCAATG 2 cut(s) 1695, 1747
BseMII CTCAG 2 cut(s) 641, 1113
BseNI ACTGG 5 cut(s) 131, 151, 668, 1437, 1486
BsePI GCGCGC 1 cut(s) 1131
BseRI GAGGAG 2 cut(s) 634, 1328
BseSI GKGCMC 1 cut(s) 1266
BseXI GCAGC 9 cut(s) 92, 489, 492, 666, 681, 1441, 1605, 1718, 1721
BseYI CCCAGC 1 cut(s) 1154
BsgI GTGCAG 1 cut(s) 1475
Bsh1236I CGCG 8 cut(s) 63, 288, 398, 470, 671, 683, 1133, 1504
Bsh1285I CGRYCG 1 cut(s) 61
BshFI GGCC 4 cut(s) 440, 668, 680, 1232
BshNI GGYRCC 1 cut(s) 1616
BshVI ATCGAT 1 cut(s) 875
BsiEI CGRYCG 1 cut(s) 61
BsiHKAI GWGCWC 2 cut(s) 958, 1266
BsiSI CCGG 9 cut(s) 28, 119, 293, 479, 554, 917, 951, 983, 1703
BslFI GGGAC 1 cut(s) 226
BslI CCNNNNNNNGG 8 cut(s) 118, 292, 448, 454, 950, 1029, 1626, 1641
BsmAI GTCTC 4 cut(s) 180, 714, 1175, 1493
BsmBI CGTCTC 3 cut(s) 714, 1175, 1493
BsmFI GGGAC 1 cut(s) 226
BsmI GAATGC 3 cut(s) 901, 1385, 1491
BsnI GGCC 4 cut(s) 440, 668, 680, 1232
Bsp1286I GDGCHC 2 cut(s) 958, 1266
Bsp13I TCCGGA 1 cut(s) 950
Bsp1720I GCTNAGC 1 cut(s) 1136
BspANI GGCC 4 cut(s) 440, 668, 680, 1232
BspCNI CTCAG 2 cut(s) 642, 1114
BspDI ATCGAT 1 cut(s) 875
BspEI TCCGGA 1 cut(s) 950
BspFNI CGCG 8 cut(s) 63, 288, 398, 470, 671, 683, 1133, 1504
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 8 cut(s) 417, 483, 630, 647, 942, 949, 1302, 1618
BspMI ACCTGC 2 cut(s) 890, 1650
BspOI GCTAGC 1 cut(s) 1526
BspPI GGATC 5 cut(s) 303, 1217, 1297, 1393, 1544
BspT107I GGYRCC 1 cut(s) 1616
BsrBI CCGCTC 2 cut(s) 1322, 1774
BsrDI GCAATG 2 cut(s) 1695, 1747
BsrFI RCCGGY 2 cut(s) 553, 916
BsrI ACTGG 5 cut(s) 131, 151, 668, 1437, 1486
BssAI RCCGGY 2 cut(s) 553, 916
BssECI CCNNGG 3 cut(s) 226, 681, 1575
BssHII GCGCGC 1 cut(s) 1131
BssNI GRCGYC 6 cut(s) 122, 162, 452, 465, 599, 910
BssSI CACGAG 2 cut(s) 1293, 1451
BssT1I CCWWGG 1 cut(s) 1575
Bst2BI CACGAG 2 cut(s) 1293, 1451
Bst2UI CCWGG 6 cut(s) 449, 945, 1074, 1092, 1614, 1778
Bst4CI ACNGT 3 cut(s) 211, 1172, 1736
Bst6I CTCTTC 2 cut(s) 367, 1043
BstACI GRCGYC 6 cut(s) 122, 162, 452, 465, 599, 910
BstAPI GCANNNNNTGC 1 cut(s) 1380
BstDEI CTNAG 5 cut(s) 510, 650, 1122, 1136, 1763
BstDSI CCRYGG 2 cut(s) 226, 681
BstF5I GGATG 4 cut(s) 147, 1192, 1537, 1575
BstFNI CGCG 8 cut(s) 63, 288, 398, 470, 671, 683, 1133, 1504
BstH2I RGCGCY 4 cut(s) 283, 695, 1143, 1529
BstHHI GCGC 9 cut(s) 282, 400, 472, 694, 1133, 1135, 1142, 1528, 1719
BstMAI GTCTC 4 cut(s) 180, 714, 1175, 1493
BstMCI CGRYCG 1 cut(s) 61
BstNI CCWGG 6 cut(s) 449, 945, 1074, 1092, 1614, 1778
BstSLI GKGCMC 1 cut(s) 1266
BstUI CGCG 8 cut(s) 63, 288, 398, 470, 671, 683, 1133, 1504
BstV1I GCAGC 9 cut(s) 92, 489, 492, 666, 681, 1441, 1605, 1718, 1721
BstV2I GAAGAC 1 cut(s) 25
BstX2I RGATCY 2 cut(s) 1289, 1536
BstYI RGATCY 2 cut(s) 1289, 1536
Bsu15I ATCGAT 1 cut(s) 875
Bsu36I CCTNAGG 1 cut(s) 1763
BsuI GTATCC 1 cut(s) 1689
BsuRI GGCC 4 cut(s) 440, 668, 680, 1232
BsuTUI ATCGAT 1 cut(s) 875
BtgI CCRYGG 2 cut(s) 226, 681
BtrI CACGTC 1 cut(s) 1853
BtsCI GGATG 4 cut(s) 147, 1192, 1537, 1575
BtsIMutI CAGTG 2 cut(s) 1023, 1741
BveI ACCTGC 2 cut(s) 890, 1650
CaiI CAGNNNCTG 1 cut(s) 933
CciI TCATGA 1 cut(s) 1309
CfoI GCGC 9 cut(s) 282, 400, 472, 694, 1133, 1135, 1142, 1528, 1719
Cfr10I RCCGGY 2 cut(s) 553, 916
Cfr13I GGNCC 5 cut(s) 415, 439, 666, 924, 1230
Cfr42I CCGCGG 1 cut(s) 684
ClaI ATCGAT 1 cut(s) 875
CseI GACGC 9 cut(s) 111, 170, 184, 404, 441, 473, 588, 918, 1510
CsiI ACCWGGT 2 cut(s) 1090, 1612
Csp6I GTAC 3 cut(s) 128, 1041, 1663
CspCI CAANNNNNGTGG 2 cut(s) 1255, 1290
CviAII CATG 6 cut(s) 347, 825, 1310, 1465, 1511, 1599
CviQI GTAC 3 cut(s) 128, 1041, 1663
DdeI CTNAG 5 cut(s) 510, 650, 1122, 1136, 1763
DrdI GACNNNNNNGTC 1 cut(s) 302
DriI GACNNNNNGTC 4 cut(s) 121, 194, 238, 727
DseDI GACNNNNNNGTC 1 cut(s) 302
Eam1104I CTCTTC 2 cut(s) 367, 1043
Eam1105I GACNNNNNGTC 4 cut(s) 121, 194, 238, 727
EarI CTCTTC 2 cut(s) 367, 1043
EciI GGCGGA 4 cut(s) 173, 301, 701, 990
Ecl136II GAGCTC 1 cut(s) 956
Eco130I CCWWGG 1 cut(s) 1575
Eco24I GRGCYC 1 cut(s) 958
Eco47I GGWCC 2 cut(s) 415, 924
Eco47III AGCGCT 3 cut(s) 693, 1141, 1527
Eco53kI GAGCTC 1 cut(s) 956
Eco57I CTGAAG 2 cut(s) 401, 1400
Eco81I CCTNAGG 1 cut(s) 1763
EcoICRI GAGCTC 1 cut(s) 956
EcoO109I RGGNCCY 1 cut(s) 415
EcoRII CCWGG 6 cut(s) 447, 943, 1072, 1090, 1612, 1776
EcoT14I CCWWGG 1 cut(s) 1575
EcoT38I GRGCYC 1 cut(s) 958
ErhI CCWWGG 1 cut(s) 1575
Esp3I CGTCTC 3 cut(s) 714, 1175, 1493
FaeI CATG 6 cut(s) 350, 828, 1313, 1468, 1514, 1602
FaqI GGGAC 1 cut(s) 226
FatI CATG 6 cut(s) 346, 824, 1309, 1464, 1510, 1598
FauI CCCGC 3 cut(s) 16, 252, 587
FauNDI CATATG 1 cut(s) 1543
FbaI TGATCA 1 cut(s) 204
FokI GGATG 4 cut(s) 134, 1199, 1544, 1582
FriOI GRGCYC 1 cut(s) 958
FspBI CTAG 4 cut(s) 987, 1517, 1523, 1858
GlaI GCGC 9 cut(s) 281, 399, 471, 693, 1132, 1134, 1141, 1527, 1718
GsaI CCCAGC 1 cut(s) 1158
GsuI CTGGAG 2 cut(s) 1663, 1760
HaeII RGCGCY 4 cut(s) 283, 695, 1143, 1529
HaeIII GGCC 4 cut(s) 440, 668, 680, 1232
HapII CCGG 9 cut(s) 28, 119, 293, 479, 554, 917, 951, 983, 1703
HgaI GACGC 9 cut(s) 111, 170, 184, 404, 441, 473, 588, 918, 1510
HhaI GCGC 9 cut(s) 282, 400, 472, 694, 1133, 1135, 1142, 1528, 1719
Hin1I GRCGYC 6 cut(s) 122, 162, 452, 465, 599, 910
Hin1II CATG 6 cut(s) 350, 828, 1313, 1468, 1514, 1602
Hin6I GCGC 9 cut(s) 280, 398, 470, 692, 1131, 1133, 1140, 1526, 1717
HinP1I GCGC 9 cut(s) 280, 398, 470, 692, 1131, 1133, 1140, 1526, 1717
HincII GTYRAC 1 cut(s) 390
HindII GTYRAC 1 cut(s) 390
HpaI GTTAAC 1 cut(s) 390
HpaII CCGG 9 cut(s) 28, 119, 293, 479, 554, 917, 951, 983, 1703
HphI GGTGA 6 cut(s) 244, 265, 343, 592, 796, 914
Hpy166II GTNNAC 5 cut(s) 156, 390, 1264, 1442, 1801
Hpy8I GTNNAC 5 cut(s) 156, 390, 1264, 1442, 1801
HpyAV CCTTC 6 cut(s) 670, 781, 1116, 1200, 1560, 1649
HpyCH4III ACNGT 3 cut(s) 211, 1172, 1736
HpyCH4IV ACGT 3 cut(s) 566, 758, 1852
HpyCH4V TGCA 5 cut(s) 147, 899, 1264, 1456, 1510
HpyF3I CTNAG 5 cut(s) 510, 650, 1122, 1136, 1763
HpySE526I ACGT 3 cut(s) 566, 758, 1852
Hsp92I GRCGYC 6 cut(s) 122, 162, 452, 465, 599, 910
Hsp92II CATG 6 cut(s) 350, 828, 1313, 1468, 1514, 1602
HspAI GCGC 9 cut(s) 280, 398, 470, 692, 1131, 1133, 1140, 1526, 1717
Kpn2I TCCGGA 1 cut(s) 950
KroI GCCGGC 1 cut(s) 553
KroNI GCCGGC 1 cut(s) 555
Ksp22I TGATCA 1 cut(s) 204
KspAI GTTAAC 1 cut(s) 390
KspI CCGCGG 1 cut(s) 684
LmnI GCTCC 8 cut(s) 409, 611, 621, 953, 1147, 1306, 1705, 1779
Lsp1109I GCAGC 9 cut(s) 92, 489, 492, 666, 681, 1441, 1605, 1718, 1721
LweI GCATC 2 cut(s) 156, 279
MabI ACCWGGT 2 cut(s) 1090, 1612
MaeI CTAG 4 cut(s) 987, 1517, 1523, 1858
MaeII ACGT 3 cut(s) 566, 758, 1852
MaeIII GTNAC 3 cut(s) 349, 605, 1348
MbiI CCGCTC 2 cut(s) 1322, 1774
MboII GAAGA 6 cut(s) 25, 354, 979, 982, 1060, 1406
MfeI CAATTG 1 cut(s) 962
MflI RGATCY 2 cut(s) 1289, 1536
MhlI GDGCHC 2 cut(s) 958, 1266
MluCI AATT 3 cut(s) 962, 1268, 1684
MluI ACGCGT 1 cut(s) 1502
MlyI GAGTC 3 cut(s) 227, 290, 775
MmeI TCCRAC 5 cut(s) 81, 192, 711, 749, 1476
MroI TCCGGA 1 cut(s) 950
MroNI GCCGGC 1 cut(s) 553
MroXI GAANNNNTTC 1 cut(s) 1489
MseI TTAA 3 cut(s) 389, 1164, 1176
MslI CAYNNNNRTG 1 cut(s) 257
MspA1I CMGCKG 2 cut(s) 302, 683
MspI CCGG 9 cut(s) 28, 119, 293, 479, 554, 917, 951, 983, 1703
MunI CAATTG 1 cut(s) 962
Mva1269I GAATGC 3 cut(s) 901, 1385, 1491
MvaI CCWGG 6 cut(s) 449, 945, 1074, 1092, 1614, 1778
MvnI CGCG 8 cut(s) 63, 288, 398, 470, 671, 683, 1133, 1504
NaeI GCCGGC 1 cut(s) 555
NciI CCSGG 4 cut(s) 29, 119, 293, 479
NdeI CATATG 1 cut(s) 1543
NgoMIV GCCGGC 1 cut(s) 553
NheI GCTAGC 1 cut(s) 1522
NlaIII CATG 6 cut(s) 350, 828, 1313, 1468, 1514, 1602
NlaIV GGNNCC 8 cut(s) 417, 483, 630, 647, 942, 949, 1302, 1618
NmuCI GTSAC 2 cut(s) 349, 605
PagI TCATGA 1 cut(s) 1309
PaqCI CACCTGC 1 cut(s) 890
PauI GCGCGC 1 cut(s) 1131
PcsI WCGNNNNNNNCGW 3 cut(s) 84, 494, 596
PctI GAATGC 3 cut(s) 901, 1385, 1491
PdiI GCCGGC 1 cut(s) 555
PdmI GAANNNNTTC 1 cut(s) 1489
PfeI GAWTC 8 cut(s) 95, 459, 808, 1069, 1325, 1583, 1791, 1816
PflMI CCANNNNNTGG 1 cut(s) 1641
PfoI TCCNGGA 2 cut(s) 1072, 1776
PleI GAGTC 3 cut(s) 227, 290, 774
PpsI GAGTC 3 cut(s) 227, 290, 774
PpuMI RGGWCCY 1 cut(s) 415
Psp124BI GAGCTC 1 cut(s) 958
Psp1406I AACGTT 1 cut(s) 758
Psp5II RGGWCCY 1 cut(s) 415
Psp6I CCWGG 6 cut(s) 447, 943, 1072, 1090, 1612, 1776
PspFI CCCAGC 1 cut(s) 1154
PspGI CCWGG 6 cut(s) 447, 943, 1072, 1090, 1612, 1776
PspN4I GGNNCC 8 cut(s) 417, 483, 630, 647, 942, 949, 1302, 1618
PspPI GGNCC 5 cut(s) 415, 439, 666, 924, 1230
PspPPI RGGWCCY 1 cut(s) 415
PstNI CAGNNNCTG 1 cut(s) 933
PsuI RGATCY 2 cut(s) 1289, 1536
PteI GCGCGC 1 cut(s) 1131
RsaI GTAC 3 cut(s) 129, 1042, 1664
RsaNI GTAC 3 cut(s) 128, 1041, 1663
RseI CAYNNNNRTG 1 cut(s) 257
SacI GAGCTC 1 cut(s) 958
SacII CCGCGG 1 cut(s) 684
SaqAI TTAA 3 cut(s) 389, 1164, 1176
Sau96I GGNCC 5 cut(s) 415, 439, 666, 924, 1230
ScaI AGTACT 1 cut(s) 1042
SchI GAGTC 3 cut(s) 227, 290, 775
SduI GDGCHC 2 cut(s) 958, 1266
SexAI ACCWGGT 2 cut(s) 1090, 1612
SfaNI GCATC 2 cut(s) 156, 279
Sfr303I CCGCGG 1 cut(s) 684
SgrBI CCGCGG 1 cut(s) 684
SinI GGWCC 2 cut(s) 415, 924
SmiMI CAYNNNNRTG 1 cut(s) 257
SmlI CTYRAG 4 cut(s) 20, 698, 1672, 1828
SmoI CTYRAG 4 cut(s) 20, 698, 1672, 1828
Sse9I AATT 3 cut(s) 962, 1268, 1684
SspMI CTAG 4 cut(s) 987, 1517, 1523, 1858
SstI GAGCTC 1 cut(s) 958
StyI CCWWGG 1 cut(s) 1575
TaaI ACNGT 3 cut(s) 211, 1172, 1736
TaiI ACGT 3 cut(s) 569, 761, 1855
TaqI TCGA 8 cut(s) 93, 114, 462, 488, 516, 762, 777, 875
TasI AATT 3 cut(s) 962, 1268, 1684
TatI WGTACW 1 cut(s) 1040
TauI GCSGC 8 cut(s) 470, 671, 683, 686, 865, 868, 871, 1593
TfiI GAWTC 8 cut(s) 95, 459, 808, 1069, 1325, 1583, 1791, 1816
Tru1I TTAA 3 cut(s) 389, 1164, 1176
Tru9I TTAA 3 cut(s) 389, 1164, 1176
TscAI CASTG 2 cut(s) 1030, 1741
TseFI GTSAC 2 cut(s) 349, 605
TseI GCWGC 9 cut(s) 80, 502, 505, 654, 694, 1429, 1593, 1706, 1709
Tsp45I GTSAC 2 cut(s) 349, 605
TspDTI ATGAA 4 cut(s) 25, 821, 1453, 1783
TspGWI ACGGA 5 cut(s) 115, 422, 624, 1199, 1667
TspRI CASTG 2 cut(s) 1030, 1741
Van91I CCANNNNNTGG 1 cut(s) 1641
VneI GTGCAC 1 cut(s) 1262
VpaK11BI GGWCC 2 cut(s) 415, 924
XapI RAATTY 1 cut(s) 1268
XcmI CCANNNNNNNNNTGG 1 cut(s) 1784
XmnI GAANNNNTTC 1 cut(s) 1489
XspI CTAG 4 cut(s) 987, 1517, 1523, 1858
ZrmI AGTACT 1 cut(s) 1042
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.