Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0010759

Physical Location & Seq

Genomic Coordinates Forward (+)

1957949 .. 1960358

Gene Structure 2410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG028500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGCCTCCGGCGCAGAATCTGAAGCACCAGGTGTTCACTTGCCTGACGAAGCTCTCCGACCGTGACACGCACTCGCTGGCGGCGACGGAGCTAGTCTCCATAGCCCGGACTCTGGACCCGACCACCGTGCCGACTTTCCTCTCATGCATCCACTCCACCGACGCCTCCGACAAGTCGCCGGTGAGGAAGCAATGCGTGCACCTAATCGCCGTCCTCTCCGAAACCCACGGCGACGCGCTGGCGCCGCACCTGTCCAAAATGCTTAATAACATAACCAAGCGCCTCCGCGACCCCGACTCCGCCGTCCGATCCGCCTGCCAAAACGCCGTCGCTTCCCTCTCCTGCCACGTCACCAAGCCGCCGTTCAGCTCGTTCTCGAAGCCGCTGGCCGAGGCGCTGTTCACGGAGCAGGACGTGCACTCGCAGATCGGCGCCGCGCTCTGCCTGGCCTCGGCGATCGACGCCGCCGCCGACCCCGAGCCGGCCAGGCTGGCGAAGCTGTTGCCGAAGTTCGAGAGGTTACTGAAGAGCGACAGCTTTAAGGCCAAGCCGGCGCTGTTGACGCTGATCGGGAGTGTGATCGAGTCCGGCGGCGCGTCCGGTCAAGGAGCTCTGAAGAACTTGGTTCCTTGCTTGGTGAACTTCCTCAGCTCCGATGACTGGGCGGCGAGGAAGGCCGCGGCAGAAGGCTTGGCGAAGCTGGCGGTTGCAGAGAGAGACTCCTTGTCCGAATTCAAAGCTGGCGCTTTGAGAACTTTCGAGAGTCGGAAATTTGATAAGGTGAAGGGTGTTAGGGAGGTTATGAATCAGATGATGGAAGCTTGGAAGCAGATTCCTGATCTTTCCGACGAGGCTTCTCCGCCGCCGGTGGACTCAAATGCTTCTTCCAGAGGTCCGGAGAATGCAAGTGATGGAAGGCATCCGGCTGGGCCCAGAATTTGTGGTGCTTCTGGTGTTGAAGCTTCTCAGTTGAAGAAGAAACACATCTCGGCTAACAGATCGACTCCACCGGATAGTTCTTATGCTACCACTGCTAGGAAGAGAAGCCCTTTCAAAAGTAATGAGAAGAAGACTTCATCAATGTTTCGAAAGCCAGGCCATAAGAAGGGTTTAGATATGGAAGTTGAGATTGCTGCTACTAATGCTCCAGGGGCTTTCCGTGATGGTTATATGGAGGGAGATGAAAATGTCCCAGAAAGGATCAATGAAAAGAGTAGATTTTCAAAGCCAGAAACAAAACGGGCCTTATTCCAAAAGAGTTCTGATAACAAAGTGCACAAATTTGGTGGTTCGAGGGCAGGATCTCGTGTTGCTCCATATCATGAGGAGAGCTCAGAATCTACAGTTGTTGTGAGTAGTGCTACACCGGATATCCATAAGAACCACGGAGAGTGTGAGGATTTGTCCCTGATCCGCAGTCAACTTATCCAGATTGAAAAGCAGCAGTCCAATTTGTTTGATCTCCTGCAGAAATTCATTGGCAGCTCACAAAATGGAATGCATTCTTTGGAAACACGCGTACATGGGCTAGAGCTAGCTCTGGATGAGATCTCCTATGATTTGGCTTTGTCAAGTGGAAGGATGACTAATCTCGAGTCGCGCAGCAAAACTTGTTGCATGCTACCTGGTGGTGACTTTTGGAGCTCCAAGTTCTGGAAGAAAACAGAAGGCAGGTACTCAATCTCAAGGTTTTCTAATTCCAGGGCTGCATCTGCAGCAGCCTTGCGTTACAGAGCTGACCAGAATGGCAGTGCTGAAACATCTATGCTGGAGAACCGAAGGTTTCGGTTCCAGGACAGGAGTGGGTTCATTGTAAACCCTTTGGCAGAGATTCGGACCGACTCAAGAGGTATATCAGAGGTGGCACGTCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT

Protein Analysis

624

Amino Acids

68.09

Weight (kDa)

9.17

Isoelectric Point (pI)

51.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOR1L1_N	PF24714	6 - 277	2.2e-114	TORTIFOLIA1 N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62580 AT5G62580
fragaria_vesca	FvH4_5g16200 FvH4_5g16200 FvH4_5g16200 FvH4_5g16200
malus_domestica	MD06G1183000.v1.1 MD14G1188900.v1.1
prunus_persica	Prupe.5G181300_v2.0.a1
pyrus_communis	pycom06g16200
rosa_chinensis	RchiOBHm_Chr7g0179911
rosa_laevigata	RLG00000005310
rosa_multiflora	Rmu_sc0012773.1_g000008
rosa_roxburghii	Rroxscaffold_3G00273320
rosa_rugosa	Rorug06G0429200
rosa_samantha	Rh7AG029300 Rh7BG028500 Rh7CG030200 Rh7DG029600
rosa_wichuraiana	Rw7G002350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	302
Acc36I	ACCTGC	1 cut(s)	1662
AccB1I	GGYRCC	2 cut(s)	241, 431
AccB7I	CCANNNNNTGG	1 cut(s)	1653
AccII	CGCG	7 cut(s)	236, 288, 437, 596, 680, 1518, 1600
AccIII	TCCGGA	1 cut(s)	895
AclWI	GGATC	4 cut(s)	303, 1208, 1309, 1405
AcoI	YGGCCR	2 cut(s)	387, 483
AcsI	RAATTY	5 cut(s)	731, 770, 936, 1280, 1472
AcuI	CTGAAG	3 cut(s)	41, 545, 635
AcyI	GRCGYC	4 cut(s)	162, 242, 432, 462
AdeI	CACNNNGTG	1 cut(s)	31
AfaI	GTAC	2 cut(s)	1521, 1676
AfiI	CCNNNNNNNGG	8 cut(s)	105, 112, 451, 481, 660, 1035, 1105, 1653
AflIII	ACRYGT	1 cut(s)	1516
AgsI	TTSAA	6 cut(s)	736, 959, 973, 1054, 1224, 1436
AhdI	GACNNNNNGTC	1 cut(s)	724
AjiI	CACGTC	3 cut(s)	349, 415, 1868
AjnI	CCWGG	8 cut(s)	27, 444, 485, 1093, 1147, 1624, 1700, 1791
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
Alw21I	GWGCWC	6 cut(s)	201, 420, 613, 1278, 1334, 1646
Alw26I	GTCTC	2 cut(s)	100, 711
Alw44I	GTGCAC	3 cut(s)	197, 416, 1274
AlwI	GGATC	4 cut(s)	303, 1208, 1309, 1405
AlwNI	CAGNNNCTG	1 cut(s)	19
Ama87I	CYCGRG	2 cut(s)	476, 1592
Aor13HI	TCCGGA	1 cut(s)	895
AoxI	GGCC	8 cut(s)	387, 447, 483, 543, 675, 929, 1096, 1242
ApaI	GGGCCC	1 cut(s)	933
ApaLI	GTGCAC	3 cut(s)	197, 416, 1274
ApeKI	GCWGC	7 cut(s)	1133, 1441, 1482, 1602, 1706, 1715, 1718
ApoI	RAATTY	5 cut(s)	731, 770, 936, 1280, 1472
Asp700I	GAANNNNTTC	1 cut(s)	1501
AspS9I	GGNCC	6 cut(s)	115, 893, 929, 930, 1242, 1836
AsuC2I	CCSGG	1 cut(s)	106
AsuHPI	GGTGA	5 cut(s)	193, 343, 649, 793, 1643
AsuII	TTCGAA	1 cut(s)	1087
AsuNHI	GCTAGC	1 cut(s)	1534
AvaI	CYCGRG	2 cut(s)	476, 1592
AvaII	GGWCC	3 cut(s)	115, 893, 1836
BaeGI	GKGCMC	4 cut(s)	201, 420, 933, 1278
BanI	GGYRCC	2 cut(s)	241, 431
BanII	GRGCYC	4 cut(s)	613, 933, 1334, 1646
BauI	CACGAG	1 cut(s)	1305
BbsI	GAAGAC	1 cut(s)	1076
Bbv12I	GWGCWC	6 cut(s)	201, 420, 613, 1278, 1334, 1646
BbvCI	CCTCAGC	1 cut(s)	647
BbvI	GCAGC	7 cut(s)	1120, 1453, 1494, 1614, 1693, 1727, 1730
BccI	CCATC	3 cut(s)	808, 905, 1157
BceAI	ACGGC	5 cut(s)	194, 244, 287, 311, 346
BcgI	CGANNNNNNTGC	6 cut(s)	109, 143, 297, 331, 484, 518
BciT130I	CCWGG	8 cut(s)	29, 446, 487, 1095, 1149, 1626, 1702, 1793
BcnI	CCSGG	1 cut(s)	106
BcoDI	GTCTC	2 cut(s)	100, 711
BfaI	CTAG	5 cut(s)	92, 1035, 1529, 1535, 1873
BfmI	CTRYAG	3 cut(s)	1341, 1466, 1713
BfoI	RGCGCY	6 cut(s)	245, 283, 398, 435, 557, 747
BfuAI	ACCTGC	1 cut(s)	1662
BglI	GCCNNNNNGGC	3 cut(s)	487, 491, 551
BglII	AGATCT	1 cut(s)	1548
Bme1390I	CCNGG	9 cut(s)	29, 106, 446, 487, 1095, 1149, 1626, 1702, 1793
Bme18I	GGWCC	3 cut(s)	115, 893, 1836
BmeRI	GACNNNNNGTC	1 cut(s)	724
BmeT110I	CYCGRG	2 cut(s)	476, 1592
BmgBI	CACGTC	3 cut(s)	349, 415, 1868
BmgT120I	GGNCC	6 cut(s)	115, 893, 929, 930, 1242, 1836
BmiI	GGNNCC	6 cut(s)	117, 243, 433, 627, 931, 1790
BmrFI	CCNGG	9 cut(s)	29, 106, 446, 487, 1095, 1149, 1626, 1702, 1793
BmrI	ACTGGG	1 cut(s)	670
BmsI	GCATC	3 cut(s)	156, 928, 1718
BmtI	GCTAGC	1 cut(s)	1538
BmuI	ACTGGG	1 cut(s)	670
BpiI	GAAGAC	1 cut(s)	1076
BplI	GAGNNNNNCTC	6 cut(s)	80, 112, 704, 736, 1316, 1348
BpmI	CTGGAG	2 cut(s)	1131, 1790
Bpu10I	CCTNAGC	1 cut(s)	647
Bpu14I	TTCGAA	1 cut(s)	1087
BpuEI	CTTGAG	2 cut(s)	1669, 1828
BpuMI	CCSGG	1 cut(s)	106
BsaHI	GRCGYC	4 cut(s)	162, 242, 432, 462
BsaJI	CCNNGG	7 cut(s)	226, 390, 450, 678, 1148, 1384, 1701
BsaWI	WCCGGW	4 cut(s)	599, 895, 1009, 1366
BsaXI	ACNNNNNCTCC	4 cut(s)	281, 311, 1129, 1159
Bsc4I	CCNNNNNNNGG	8 cut(s)	105, 112, 451, 481, 660, 1035, 1105, 1653
Bse118I	RCCGGY	4 cut(s)	178, 481, 550, 865
Bse1I	ACTGG	1 cut(s)	665
Bse3DI	GCAATG	1 cut(s)	197
BseAI	TCCGGA	1 cut(s)	895
BseBI	CCWGG	8 cut(s)	29, 446, 487, 1095, 1149, 1626, 1702, 1793
BseDI	CCNNGG	7 cut(s)	226, 390, 450, 678, 1148, 1384, 1701
BseGI	GGATG	4 cut(s)	147, 919, 1549, 1587
BseLI	CCNNNNNNNGG	8 cut(s)	105, 112, 451, 481, 660, 1035, 1105, 1653
BseMI	GCAATG	1 cut(s)	197
BseMII	CTCAG	3 cut(s)	661, 980, 1347
BseNI	ACTGG	1 cut(s)	665
BseRI	GAGGAG	1 cut(s)	1340
BseSI	GKGCMC	4 cut(s)	201, 420, 933, 1278
BseXI	GCAGC	7 cut(s)	1120, 1453, 1494, 1614, 1693, 1727, 1730
BseYI	CCCAGC	1 cut(s)	926
Bsh1236I	CGCG	7 cut(s)	236, 288, 437, 596, 680, 1518, 1600
Bsh1285I	CGRYCG	2 cut(s)	61, 459
BshFI	GGCC	8 cut(s)	389, 449, 485, 545, 677, 931, 1098, 1244
BshNI	GGYRCC	2 cut(s)	241, 431
BsiEI	CGRYCG	2 cut(s)	61, 459
BsiHKAI	GWGCWC	6 cut(s)	201, 420, 613, 1278, 1334, 1646
BsiHKCI	CYCGRG	2 cut(s)	476, 1592
BslFI	GGGAC	2 cut(s)	1175, 1390
BslI	CCNNNNNNNGG	8 cut(s)	105, 112, 451, 481, 660, 1035, 1105, 1653
BsmAI	GTCTC	2 cut(s)	100, 711
BsmFI	GGGAC	2 cut(s)	1175, 1390
BsmI	GAATGC	3 cut(s)	907, 1501, 1503
BsnI	GGCC	8 cut(s)	389, 449, 485, 545, 677, 931, 1098, 1244
BsoBI	CYCGRG	2 cut(s)	476, 1592
Bsp119I	TTCGAA	1 cut(s)	1087
Bsp120I	GGGCCC	1 cut(s)	929
Bsp1286I	GDGCHC	7 cut(s)	201, 420, 613, 933, 1278, 1334, 1646
Bsp13I	TCCGGA	1 cut(s)	895
BspANI	GGCC	8 cut(s)	389, 449, 485, 545, 677, 931, 1098, 1244
BspCNI	CTCAG	3 cut(s)	660, 979, 1346
BspEI	TCCGGA	1 cut(s)	895
BspFNI	CGCG	7 cut(s)	236, 288, 437, 596, 680, 1518, 1600
BspHI	TCATGA	1 cut(s)	1321
BspLI	GGNNCC	6 cut(s)	117, 243, 433, 627, 931, 1790
BspMAI	CTGCAG	2 cut(s)	1470, 1717
BspMI	ACCTGC	1 cut(s)	1662
BspOI	GCTAGC	1 cut(s)	1538
BspPI	GGATC	4 cut(s)	303, 1208, 1309, 1405
BspQI	GCTCTTC	1 cut(s)	521
BspT104I	TTCGAA	1 cut(s)	1087
BspT107I	GGYRCC	2 cut(s)	241, 431
BsrDI	GCAATG	1 cut(s)	197
BsrFI	RCCGGY	4 cut(s)	178, 481, 550, 865
BsrI	ACTGG	1 cut(s)	665
BssAI	RCCGGY	4 cut(s)	178, 481, 550, 865
BssECI	CCNNGG	7 cut(s)	226, 390, 450, 678, 1148, 1384, 1701
BssNI	GRCGYC	4 cut(s)	162, 242, 432, 462
BssSI	CACGAG	1 cut(s)	1305
Bst2BI	CACGAG	1 cut(s)	1305
Bst2UI	CCWGG	8 cut(s)	29, 446, 487, 1095, 1149, 1626, 1702, 1793
Bst4CI	ACNGT	3 cut(s)	62, 127, 1345
Bst6I	CTCTTC	2 cut(s)	521, 1034
BstACI	GRCGYC	4 cut(s)	162, 242, 432, 462
BstAPI	GCANNNNNTGC	2 cut(s)	196, 415
BstBI	TTCGAA	1 cut(s)	1087
BstDEI	CTNAG	3 cut(s)	647, 966, 1333
BstDSI	CCRYGG	3 cut(s)	226, 678, 1384
BstF5I	GGATG	4 cut(s)	147, 919, 1549, 1587
BstFNI	CGCG	7 cut(s)	236, 288, 437, 596, 680, 1518, 1600
BstH2I	RGCGCY	6 cut(s)	245, 283, 398, 435, 557, 747
BstMAI	GTCTC	2 cut(s)	100, 711
BstMCI	CGRYCG	2 cut(s)	61, 459
BstNI	CCWGG	8 cut(s)	29, 446, 487, 1095, 1149, 1626, 1702, 1793
BstNSI	RCATGY	1 cut(s)	1621
BstSCI	CCNGG	9 cut(s)	27, 104, 444, 485, 1093, 1147, 1624, 1700, 1791
BstSFI	CTRYAG	3 cut(s)	1341, 1466, 1713
BstSLI	GKGCMC	4 cut(s)	201, 420, 933, 1278
BstUI	CGCG	7 cut(s)	236, 288, 437, 596, 680, 1518, 1600
BstV1I	GCAGC	7 cut(s)	1120, 1453, 1494, 1614, 1693, 1727, 1730
BstV2I	GAAGAC	1 cut(s)	1076
BstX2I	RGATCY	2 cut(s)	1301, 1548
BstYI	RGATCY	2 cut(s)	1301, 1548
BsuRI	GGCC	8 cut(s)	389, 449, 485, 545, 677, 931, 1098, 1244
BtgI	CCRYGG	3 cut(s)	226, 678, 1384
BtrI	CACGTC	3 cut(s)	349, 415, 1868
BtsCI	GGATG	4 cut(s)	147, 919, 1549, 1587
BtsI	GCAGTG	2 cut(s)	1029, 1756
BtsIMutI	CAGTG	2 cut(s)	1029, 1756
BveI	ACCTGC	1 cut(s)	1662
CaiI	CAGNNNCTG	1 cut(s)	19
CciI	TCATGA	1 cut(s)	1321
Cfr10I	RCCGGY	4 cut(s)	178, 481, 550, 865
Cfr13I	GGNCC	6 cut(s)	115, 893, 929, 930, 1242, 1836
Cfr42I	CCGCGG	1 cut(s)	681
CpoI	CGGWCCG	1 cut(s)	1836
CseI	GACGC	5 cut(s)	170, 242, 470, 571, 585
CsiI	ACCWGGT	2 cut(s)	27, 1624
Csp6I	GTAC	2 cut(s)	1520, 1675
CspCI	CAANNNNNGTGG	2 cut(s)	1267, 1302
CspI	CGGWCCG	1 cut(s)	1836
CviAII	CATG	4 cut(s)	144, 1322, 1523, 1618
CviQI	GTAC	2 cut(s)	1520, 1675
DdeI	CTNAG	3 cut(s)	647, 966, 1333
DinI	GGCGCC	2 cut(s)	243, 433
DraIII	CACNNNGTG	1 cut(s)	31
DrdI	GACNNNNNNGTC	1 cut(s)	302
DriI	GACNNNNNGTC	1 cut(s)	724
DseDI	GACNNNNNNGTC	1 cut(s)	302
EaeI	YGGCCR	2 cut(s)	387, 483
Eam1104I	CTCTTC	2 cut(s)	521, 1034
Eam1105I	GACNNNNNGTC	1 cut(s)	724
EarI	CTCTTC	2 cut(s)	521, 1034
EciI	GGCGGA	3 cut(s)	289, 301, 849
Ecl136II	GAGCTC	3 cut(s)	611, 1332, 1644
Eco24I	GRGCYC	4 cut(s)	613, 933, 1334, 1646
Eco32I	GATATC	1 cut(s)	1372
Eco47I	GGWCC	3 cut(s)	115, 893, 1836
Eco53kI	GAGCTC	3 cut(s)	611, 1332, 1644
Eco57I	CTGAAG	3 cut(s)	41, 545, 635
Eco88I	CYCGRG	2 cut(s)	476, 1592
EcoICRI	GAGCTC	3 cut(s)	611, 1332, 1644
EcoRI	GAATTC	1 cut(s)	731
EcoRII	CCWGG	8 cut(s)	27, 444, 485, 1093, 1147, 1624, 1700, 1791
EcoRV	GATATC	1 cut(s)	1372
EcoT22I	ATGCAT	2 cut(s)	149, 1503
EcoT38I	GRGCYC	4 cut(s)	613, 933, 1334, 1646
EgeI	GGCGCC	2 cut(s)	243, 433
EheI	GGCGCC	2 cut(s)	243, 433
FaeI	CATG	4 cut(s)	147, 1325, 1526, 1621
FaqI	GGGAC	2 cut(s)	1175, 1390
FatI	CATG	4 cut(s)	143, 1321, 1522, 1617
FokI	GGATG	4 cut(s)	134, 906, 1556, 1594
FriOI	GRGCYC	4 cut(s)	613, 933, 1334, 1646
FspBI	CTAG	5 cut(s)	92, 1035, 1529, 1535, 1873
GsaI	CCCAGC	1 cut(s)	930
GsuI	CTGGAG	2 cut(s)	1131, 1790
HaeII	RGCGCY	6 cut(s)	245, 283, 398, 435, 557, 747
HaeIII	GGCC	8 cut(s)	389, 449, 485, 545, 677, 931, 1098, 1244
HgaI	GACGC	5 cut(s)	170, 242, 470, 571, 585
Hin1I	GRCGYC	4 cut(s)	162, 242, 432, 462
Hin1II	CATG	4 cut(s)	147, 1325, 1526, 1621
HincII	GTYRAC	2 cut(s)	561, 1421
HindII	GTYRAC	2 cut(s)	561, 1421
HindIII	AAGCTT	2 cut(s)	819, 960
HphI	GGTGA	5 cut(s)	193, 343, 649, 793, 1643
Hpy99I	CGWCG	7 cut(s)	88, 164, 236, 332, 464, 851, 1872
HpyAV	CCTTC	8 cut(s)	667, 680, 778, 909, 1099, 1572, 1661, 1773
HpyCH4III	ACNGT	3 cut(s)	62, 127, 1345
HpyCH4IV	ACGT	3 cut(s)	348, 414, 1867
HpyF3I	CTNAG	3 cut(s)	647, 966, 1333
HpySE526I	ACGT	3 cut(s)	348, 414, 1867
Hsp92I	GRCGYC	4 cut(s)	162, 242, 432, 462
Hsp92II	CATG	4 cut(s)	147, 1325, 1526, 1621
KasI	GGCGCC	2 cut(s)	241, 431
Kpn2I	TCCGGA	1 cut(s)	895
KroI	GCCGGC	2 cut(s)	481, 550
KroNI	GCCGGC	2 cut(s)	483, 552
KspI	CCGCGG	1 cut(s)	681
LguI	GCTCTTC	1 cut(s)	521
LmnI	GCTCC	8 cut(s)	88, 406, 608, 656, 1150, 1318, 1641, 1649
Lsp1109I	GCAGC	7 cut(s)	1120, 1453, 1494, 1614, 1693, 1727, 1730
LweI	GCATC	3 cut(s)	156, 928, 1718
MabI	ACCWGGT	2 cut(s)	27, 1624
MaeI	CTAG	5 cut(s)	92, 1035, 1529, 1535, 1873
MaeII	ACGT	3 cut(s)	348, 414, 1867
MaeIII	GTNAC	5 cut(s)	62, 349, 519, 1631, 1727
MboII	GAAGA	9 cut(s)	538, 628, 876, 985, 988, 1051, 1078, 1081, 1669
MflI	RGATCY	2 cut(s)	1301, 1548
MhlI	GDGCHC	7 cut(s)	201, 420, 613, 933, 1278, 1334, 1646
MluCI	AATT	7 cut(s)	731, 770, 936, 1280, 1450, 1472, 1696
MluI	ACGCGT	1 cut(s)	1516
Mly113I	GGCGCC	2 cut(s)	242, 432
MlyI	GAGTC	9 cut(s)	103, 290, 593, 713, 772, 866, 997, 1604, 1835
MmeI	TCCRAC	4 cut(s)	81, 192, 746, 870
Mph1103I	ATGCAT	2 cut(s)	149, 1503
MroI	TCCGGA	1 cut(s)	895
MroNI	GCCGGC	2 cut(s)	481, 550
MroXI	GAANNNNTTC	1 cut(s)	1501
MseI	TTAA	2 cut(s)	264, 540
MspA1I	CMGCKG	2 cut(s)	385, 680
MspR9I	CCNGG	9 cut(s)	29, 106, 446, 487, 1095, 1149, 1626, 1702, 1793
MteI	GCGCNGCGC	1 cut(s)	435
Mva1269I	GAATGC	3 cut(s)	907, 1501, 1503
MvaI	CCWGG	8 cut(s)	29, 446, 487, 1095, 1149, 1626, 1702, 1793
MvnI	CGCG	7 cut(s)	236, 288, 437, 596, 680, 1518, 1600
NaeI	GCCGGC	2 cut(s)	483, 552
NarI	GGCGCC	2 cut(s)	242, 432
NciI	CCSGG	1 cut(s)	106
NgoMIV	GCCGGC	2 cut(s)	481, 550
NheI	GCTAGC	1 cut(s)	1534
NlaIII	CATG	4 cut(s)	147, 1325, 1526, 1621
NlaIV	GGNNCC	6 cut(s)	117, 243, 433, 627, 931, 1790
NmeAIII	GCCGAG	3 cut(s)	415, 431, 968
NmuCI	GTSAC	3 cut(s)	62, 349, 1631
NsiI	ATGCAT	2 cut(s)	149, 1503
NspI	RCATGY	1 cut(s)	1621
NspV	TTCGAA	1 cut(s)	1087
PaeI	GCATGC	1 cut(s)	1621
PaeR7I	CTCGAG	1 cut(s)	1592
PagI	TCATGA	1 cut(s)	1321
PciSI	GCTCTTC	1 cut(s)	521
PcsI	WCGNNNNNNNCGW	2 cut(s)	80, 468
PctI	GAATGC	3 cut(s)	907, 1501, 1503
PdiI	GCCGGC	2 cut(s)	483, 552
PdmI	GAANNNNTTC	1 cut(s)	1501
PfeI	GAWTC	5 cut(s)	16, 805, 832, 1337, 1831
PflMI	CCANNNNNTGG	1 cut(s)	1653
PfoI	TCCNGGA	1 cut(s)	1791
Ple19I	CGATCG	1 cut(s)	459
PleI	GAGTC	9 cut(s)	103, 290, 592, 713, 771, 866, 997, 1603, 1835
PluTI	GGCGCC	2 cut(s)	245, 435
PpsI	GAGTC	9 cut(s)	103, 290, 592, 713, 771, 866, 997, 1603, 1835
Psp124BI	GAGCTC	3 cut(s)	613, 1334, 1646
Psp6I	CCWGG	8 cut(s)	27, 444, 485, 1093, 1147, 1624, 1700, 1791
PspFI	CCCAGC	1 cut(s)	926
PspGI	CCWGG	8 cut(s)	27, 444, 485, 1093, 1147, 1624, 1700, 1791
PspN4I	GGNNCC	6 cut(s)	117, 243, 433, 627, 931, 1790
PspOMI	GGGCCC	1 cut(s)	929
PspPI	GGNCC	6 cut(s)	115, 893, 929, 930, 1242, 1836
PstI	CTGCAG	2 cut(s)	1470, 1717
PstNI	CAGNNNCTG	1 cut(s)	19
PsuI	RGATCY	2 cut(s)	1301, 1548
PvuI	CGATCG	1 cut(s)	459
RsaI	GTAC	2 cut(s)	1521, 1676
RsaNI	GTAC	2 cut(s)	1520, 1675
Rsr2I	CGGWCCG	1 cut(s)	1836
RsrII	CGGWCCG	1 cut(s)	1836
SacI	GAGCTC	3 cut(s)	613, 1334, 1646
SacII	CCGCGG	1 cut(s)	681
SapI	GCTCTTC	1 cut(s)	521
SaqAI	TTAA	2 cut(s)	264, 540
Sau96I	GGNCC	6 cut(s)	115, 893, 929, 930, 1242, 1836
SchI	GAGTC	9 cut(s)	103, 290, 593, 713, 772, 866, 997, 1604, 1835
ScrFI	CCNGG	9 cut(s)	29, 106, 446, 487, 1095, 1149, 1626, 1702, 1793
SduI	GDGCHC	7 cut(s)	201, 420, 613, 933, 1278, 1334, 1646
SexAI	ACCWGGT	2 cut(s)	27, 1624
SfaNI	GCATC	3 cut(s)	156, 928, 1718
SfcI	CTRYAG	3 cut(s)	1341, 1466, 1713
SfoI	GGCGCC	2 cut(s)	243, 433
Sfr274I	CTCGAG	1 cut(s)	1592
Sfr303I	CCGCGG	1 cut(s)	681
SfuI	TTCGAA	1 cut(s)	1087
SgrAI	CRCCGGYG	2 cut(s)	178, 865
SgrBI	CCGCGG	1 cut(s)	681
SinI	GGWCC	3 cut(s)	115, 893, 1836
SlaI	CTCGAG	1 cut(s)	1592
SmlI	CTYRAG	3 cut(s)	1592, 1684, 1843
SmoI	CTYRAG	3 cut(s)	1592, 1684, 1843
SphI	GCATGC	1 cut(s)	1621
Sse9I	AATT	7 cut(s)	731, 770, 936, 1280, 1450, 1472, 1696
SspDI	GGCGCC	2 cut(s)	241, 431
SspMI	CTAG	5 cut(s)	92, 1035, 1529, 1535, 1873
SstI	GAGCTC	3 cut(s)	613, 1334, 1646
StyD4I	CCNGG	9 cut(s)	27, 104, 444, 485, 1093, 1147, 1624, 1700, 1791
TaaI	ACNGT	3 cut(s)	62, 127, 1345
TaiI	ACGT	3 cut(s)	351, 417, 1870
TaqI	TCGA	9 cut(s)	377, 459, 513, 582, 759, 1001, 1087, 1292, 1593
TaqII	GACCGA	1 cut(s)	1853
TasI	AATT	7 cut(s)	731, 770, 936, 1280, 1450, 1472, 1696
TfiI	GAWTC	5 cut(s)	16, 805, 832, 1337, 1831
Tru1I	TTAA	2 cut(s)	264, 540
Tru9I	TTAA	2 cut(s)	264, 540
TscAI	CASTG	2 cut(s)	1036, 1756
TseFI	GTSAC	3 cut(s)	62, 349, 1631
TseI	GCWGC	7 cut(s)	1133, 1441, 1482, 1602, 1706, 1715, 1718
Tsp45I	GTSAC	3 cut(s)	62, 349, 1631
TspDTI	ATGAA	6 cut(s)	818, 1065, 1197, 1221, 1465, 1798
TspGWI	ACGGA	4 cut(s)	101, 419, 1148, 1401
TspRI	CASTG	2 cut(s)	1036, 1756
Van91I	CCANNNNNTGG	1 cut(s)	1653
VneI	GTGCAC	3 cut(s)	197, 416, 1274
VpaK11BI	GGWCC	3 cut(s)	115, 893, 1836
XapI	RAATTY	5 cut(s)	731, 770, 936, 1280, 1472
XceI	RCATGY	1 cut(s)	1621
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1799
XhoI	CTCGAG	1 cut(s)	1592
XmnI	GAANNNNTTC	1 cut(s)	1501
XspI	CTAG	5 cut(s)	92, 1035, 1529, 1535, 1873
Zsp2I	ATGCAT	2 cut(s)	149, 1503

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.