Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0015848

Physical Location & Seq

Genomic Coordinates Reverse (-)

32346446 .. 32350920

Gene Structure 4475 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1245500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGGTCGGAAAAACGGAGCCCCTCAACGCCACAGCCACCACGAAAACCGGCCAATCTCCGCCCCTAGCCACATCCATGTCAGGTCTCCTCGGCAACTTCTCGTTCAAAACCCTAAAACTGAAGACCAAGCAGCAGGAGCTCCTGATCCGAGTCTCCATCCTCTGCTTGGTCTACGTCCTCGCCTTCATCACCCGCCTCTTCAGCGTCCTCCGCTACGAGTCCATGATCCACGAGTTCGATCCCTATTTCAATTACCGTACTACCCTCTACCTTACCGAGAAGGGCTTCTACGAATTCTGGAACTGGTTCGACTCCGAGAGTTGGTACCCCTTGGGTCGGATCATCGGCGGCACCCTCTACCCTGGCCTCATGGTCACCGCTGCCATCATCTACTGGGCCCTCCGATTCCTCAGCTTCGCCGTACACATTCGCGAAGTCTGCGTCCTGACCGCTCCATTTTTCGCCTCCAACACCACCCTCGTAGCATATTTCTTCGGTAAAGAGATTTGGGACACCGGCGCCGGCCTTGTCGCCGCCGCATTGATCGCCATTTGCCCCGGCTACATCTCCAGATCGGTGGCCGGCTCCTACGACAATGAGGGTGTCGCCATTTTCGCCCTGTTGCTGACGTTTTACTTGTTCGTCAAGGCCGTCAACACCGGCTCGCTCGCTTGGGCGTTGGGCTCCGCATTGGGCTACTTCTACATGGTCTCTGCCTGGGGAGGTTATATCTTTATAATTAACTTGATTCCCCTTTACGTTTTGGTGCTTTTGATCACCGGGCGATATTCCATGAGGTTGTATGTCGCCTACAATTGCACTTATATTCTCGGAATGTTGCTCGCTATGCAAATTCGCTTTGTCGGCTTTCAGCACGTTCAGTCTGGGGAGCACATGGCTGCCATGGGCGTCTTCTTCTTGATGCAGGTATTTTACTTCTTAGATTATGTCAAGCACCTACTAAGTGACTCTAAGATGTTTCAAGCCTTTTTAAGGATCACTGTCACCTGCGCTGTAGGCGTTGGTGGTGTTGCCTTGGGAGTCGGCACTGCATCTGGCTATATCTCTCCATGGACAGGGCGGTTTTATTCCTTGCTAGATCCAACATATGCCAAGGATCACATTCCTATTATTGCATCTGTCTCTGAGCACCAACCGACGGCTTGGTCATCTTTTATGTTCGATTTTCATATCTTGCTCTTCCTTTTCCCTGCCGGTCTCTACTTCTGCTTCAAGCGTTTGTCAGATGCCACCATATTTGTAGTAATGTATGGTCTTACAAGCATGTACTTTGCTGGTGTCATGGTTCGGTTGATTCTTGTTGCCACACCTGCAGTTTGTCTTATTAGTGCCATTGCTGTCTCTGCGACTATAAAGAATTTGACACAGTTGGCAAGGGCAAAGGACAAGGTTTCCCAAACTGGTTCCACCAAAGGCACCAGCAGCACAAAGGGTTCTTCAAAGGGTTCAATTGATCAATCTCAGCCTTTTCAAAAAAATGGTGCTCTTGTCTTACTCTTTGGTGCATTCTACTTGCTTAGTAAGTATGCAACTCACTGTACCTGGGTCACGTCAGAGGCATACTCATCTCCCTCAATTGTTCTGGCTGCGAGGGGTGCCCATGGGAACAGGGTCATATTTGATGATTACCGTGAGGCATACTTTTGGCTTCGTCAGAATACTCCTCCAGATGCTAAAGTGATGTCATGGTGGGATTATGGGTACCAAATCACTGCAATGGGAAACAGAACTGTTATAGTTGACAATAACACCTGGAACAATACGCACATTGCTACAGTTGGGCGTGCAATGTCATCTTATGAAGATGAGGCATATGACATAATGAGATCGCTTGACGTCGACTATGTCTTAGTTGTATTTGGTGGTGTTACAGGTTATTCTTCTGATGATATCAACAAATTTCTGTGGATGGTGAGAATTGGGGGTGGAGTATTTCCTGTAATTAAGGAACCTGATTACCTTGTTAATGGTGAATATCGTGTTGACAAAGGTGCAGCTCCCAAGATGTTGAACTGTCTCATGTACAAGCTGTCTTACTATCGATTTGGAGAGCTGACGACAGAGTATGGCAAACCACCTGGGTATGATCGTGCACGGGGTGTTGAAATTGGAAATAAGGATATCAAACTTGAATACCTGGAAGAGGCATTCACAACGTCGAATTGGATTGTTCGTATTTACAAAGTGAAACCACCAAATAATAGGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004576 GO:0004579 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0008150 GO:0008152 GO:0008250 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016020 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0031984 GO:0032991 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043687 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0070085 GO:0071704 GO:0071944 GO:0098796 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 map00510 map00513 map01100 map04141

Pfam Domains

Protein Families

STT3

Protein Analysis

744

Amino Acids

83.32

Weight (kDa)

8.9

Isoelectric Point (pI)

31.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STT3	PF02516	51 - 449	4.8e-120	Oligosaccharyl transferase STT3, N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34130
fragaria_vesca	FvH4_5g18380 FvH4_5g18380
malus_domestica	MD06G1239500.v1.1 MD14G1245500.v1.1
prunus_persica	Prupe.5G243400_v2.0.a1
pyrus_communis	pycom06g21500
rosa_chinensis	RchiOBHm_Chr7g0177101
rosa_laevigata	RLG00000005556
rosa_multiflora	Rmu_co8426227.1_g000001
rosa_roxburghii	Rroxscaffold_3G00276090
rosa_rugosa	Rorug06G0403800
rosa_samantha	Rh7AG003200 Rh7DG003300
rosa_wichuraiana	Rw7G000270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	737
AarI	CACCTGC	2 cut(s)	1016, 1339
AasI	GACNNNNNNGTC	1 cut(s)	1165
AatII	GACGTC	1 cut(s)	1860
Acc36I	ACCTGC	3 cut(s)	916, 1016, 1339
Acc65I	GGTACC	2 cut(s)	324, 1722
AccB1I	GGYRCC	6 cut(s)	324, 350, 518, 1436, 1616, 1722
AccBSI	CCGCTC	1 cut(s)	452
AccI	GTMKAC	2 cut(s)	171, 1860
AccII	CGCG	1 cut(s)	432
AclWI	GGATC	7 cut(s)	139, 220, 233, 347, 1004, 1094, 1125
AcoI	YGGCCR	2 cut(s)	49, 579
AcsI	RAATTY	4 cut(s)	293, 852, 1378, 1919
AcuI	CTGAAG	2 cut(s)	140, 184
AcyI	GRCGYC	3 cut(s)	519, 909, 1857
AdeI	CACNNNGTG	1 cut(s)	2120
AfaI	GTAC	7 cut(s)	259, 326, 423, 1289, 1561, 1724, 2045
AfiI	CCNNNNNNNGG	7 cut(s)	166, 321, 336, 993, 1076, 1159, 2164
AjiI	CACGTC	1 cut(s)	1572
AjnI	CCWGG	6 cut(s)	361, 716, 1562, 1772, 2098, 2157
AluBI	AGCT	5 cut(s)	139, 414, 2018, 2050, 2074
AluI	AGCT	5 cut(s)	139, 414, 2018, 2050, 2074
Alw21I	GWGCWC	5 cut(s)	141, 894, 1152, 1507, 2116
Alw26I	GTCTC	7 cut(s)	89, 157, 715, 1147, 1223, 1366, 2042
Alw44I	GTGCAC	1 cut(s)	2112
AlwI	GGATC	7 cut(s)	139, 220, 233, 347, 1004, 1094, 1125
AoxI	GGCC	6 cut(s)	49, 364, 396, 523, 579, 648
ApaI	GGGCCC	1 cut(s)	400
ApaLI	GTGCAC	1 cut(s)	2112
ApeKI	GCWGC	6 cut(s)	130, 380, 899, 1443, 1607, 2015
ApoI	RAATTY	4 cut(s)	293, 852, 1378, 1919
ArsI	GACNNNNNNTTYG	2 cut(s)	426, 458
Asp700I	GAANNNNTTC	2 cut(s)	284, 305
Asp718I	GGTACC	2 cut(s)	324, 1722
AspLEI	GCGC	2 cut(s)	521, 1013
AspS9I	GGNCC	2 cut(s)	396, 397
AsuC2I	CCSGG	2 cut(s)	558, 781
AsuHPI	GGTGA	6 cut(s)	181, 367, 769, 997, 1945, 2003
BaeGI	GKGCMC	3 cut(s)	400, 1621, 2116
BanI	GGYRCC	6 cut(s)	324, 350, 518, 1436, 1616, 1722
BanII	GRGCYC	4 cut(s)	21, 141, 400, 686
BarI	GAAGNNNNNNTAC	2 cut(s)	272, 304
BauI	CACGAG	1 cut(s)	230
BbsI	GAAGAC	2 cut(s)	128, 904
Bbv12I	GWGCWC	5 cut(s)	141, 894, 1152, 1507, 2116
BbvCI	CCTCAGC	1 cut(s)	410
BbvI	GCAGC	6 cut(s)	142, 367, 886, 1455, 1594, 2027
BccI	CCATC	3 cut(s)	164, 392, 1924
BceAI	ACGGC	3 cut(s)	404, 635, 1176
BciT130I	CCWGG	6 cut(s)	363, 718, 1564, 1774, 2100, 2159
BclI	TGATCA	2 cut(s)	774, 1474
BcnI	CCSGG	2 cut(s)	558, 781
BcoDI	GTCTC	7 cut(s)	89, 157, 715, 1147, 1223, 1366, 2042
BfaI	CTAG	2 cut(s)	65, 1097
BfmI	CTRYAG	3 cut(s)	1014, 1332, 1794
BfoI	RGCGCY	1 cut(s)	522
BfuAI	ACCTGC	3 cut(s)	916, 1016, 1339
BisI	GCNGC	9 cut(s)	131, 349, 381, 534, 537, 900, 1444, 1608, 2016
BlsI	GCNGC	9 cut(s)	132, 350, 382, 535, 538, 901, 1445, 1609, 2017
Bme1390I	CCNGG	8 cut(s)	363, 558, 718, 781, 1564, 1774, 2100, 2159
BmgBI	CACGTC	1 cut(s)	1572
BmgT120I	GGNCC	2 cut(s)	396, 397
BmrFI	CCNGG	8 cut(s)	363, 558, 718, 781, 1564, 1774, 2100, 2159
BmrI	ACTGGG	1 cut(s)	403
BmsI	GCATC	5 cut(s)	912, 1061, 1145, 1237, 1681
BmuI	ACTGGG	1 cut(s)	403
BpiI	GAAGAC	2 cut(s)	128, 904
BplI	GAGNNNNNCTC	2 cut(s)	1568, 1600
BpmI	CTGGAG	2 cut(s)	553, 1671
Bpu10I	CCTNAGC	1 cut(s)	410
BpuMI	CCSGG	2 cut(s)	558, 781
Bsa29I	ATCGAT	1 cut(s)	2062
BsaHI	GRCGYC	3 cut(s)	519, 909, 1857
BsaI	GGTCTC	3 cut(s)	89, 715, 1223
Bsc4I	CCNNNNNNNGG	7 cut(s)	166, 321, 336, 993, 1076, 1159, 2164
Bse118I	RCCGGY	6 cut(s)	47, 515, 521, 581, 659, 1214
Bse1I	ACTGG	3 cut(s)	308, 398, 1426
Bse3DI	GCAATG	4 cut(s)	1353, 1743, 1788, 1815
BseBI	CCWGG	6 cut(s)	363, 718, 1564, 1774, 2100, 2159
BseCI	ATCGAT	1 cut(s)	2062
BseGI	GGATG	3 cut(s)	71, 156, 1935
BseLI	CCNNNNNNNGG	7 cut(s)	166, 321, 336, 993, 1076, 1159, 2164
BseMI	GCAATG	4 cut(s)	1353, 1743, 1788, 1815
BseMII	CTCAG	3 cut(s)	424, 1137, 1496
BseNI	ACTGG	3 cut(s)	308, 398, 1426
BseRI	GAGGAG	2 cut(s)	77, 1674
BseSI	GKGCMC	3 cut(s)	400, 1621, 2116
BseXI	GCAGC	6 cut(s)	142, 367, 886, 1455, 1594, 2027
BsgI	GTGCAG	1 cut(s)	2034
Bsh1236I	CGCG	1 cut(s)	432
BshFI	GGCC	6 cut(s)	51, 366, 398, 525, 581, 650
BshNI	GGYRCC	6 cut(s)	324, 350, 518, 1436, 1616, 1722
BshVI	ATCGAT	1 cut(s)	2062
BsiHKAI	GWGCWC	5 cut(s)	141, 894, 1152, 1507, 2116
BsiSI	CCGG	8 cut(s)	48, 516, 522, 558, 582, 660, 780, 1215
BslFI	GGGAC	1 cut(s)	524
BslI	CCNNNNNNNGG	7 cut(s)	166, 321, 336, 993, 1076, 1159, 2164
BsmAI	GTCTC	7 cut(s)	89, 157, 715, 1147, 1223, 1366, 2042
BsmFI	GGGAC	1 cut(s)	524
BsmI	GAATGC	2 cut(s)	1526, 2168
BsnI	GGCC	6 cut(s)	51, 366, 398, 525, 581, 650
Bso31I	GGTCTC	3 cut(s)	89, 715, 1223
Bsp120I	GGGCCC	1 cut(s)	396
Bsp1286I	GDGCHC	9 cut(s)	21, 141, 400, 686, 894, 1152, 1507, 1621, 2116
Bsp1407I	TGTACA	1 cut(s)	2043
Bsp19I	CCATGG	3 cut(s)	903, 1070, 1621
Bsp68I	TCGCGA	1 cut(s)	432
BspANI	GGCC	6 cut(s)	51, 366, 398, 525, 581, 650
BspCNI	CTCAG	3 cut(s)	423, 1138, 1495
BspDI	ATCGAT	1 cut(s)	2062
BspFNI	CGCG	1 cut(s)	432
BspMAI	CTGCAG	1 cut(s)	1336
BspMI	ACCTGC	3 cut(s)	916, 1016, 1339
BspPI	GGATC	7 cut(s)	139, 220, 233, 347, 1004, 1094, 1125
BspQI	GCTCTTC	1 cut(s)	1205
BspT107I	GGYRCC	6 cut(s)	324, 350, 518, 1436, 1616, 1722
BspTNI	GGTCTC	3 cut(s)	89, 715, 1223
BsrBI	CCGCTC	1 cut(s)	452
BsrDI	GCAATG	4 cut(s)	1353, 1743, 1788, 1815
BsrFI	RCCGGY	6 cut(s)	47, 515, 521, 581, 659, 1214
BsrGI	TGTACA	1 cut(s)	2043
BsrI	ACTGG	3 cut(s)	308, 398, 1426
BssAI	RCCGGY	6 cut(s)	47, 515, 521, 581, 659, 1214
BssNI	GRCGYC	3 cut(s)	519, 909, 1857
BssSI	CACGAG	1 cut(s)	230
BssT1I	CCWWGG	6 cut(s)	330, 903, 1035, 1070, 1113, 1621
Bst2BI	CACGAG	1 cut(s)	230
Bst2UI	CCWGG	6 cut(s)	363, 718, 1564, 1774, 2100, 2159
Bst4CI	ACNGT	8 cut(s)	257, 1003, 1389, 1559, 1652, 1753, 1798, 2036
Bst6I	CTCTTC	3 cut(s)	203, 1205, 2157
BstACI	GRCGYC	3 cut(s)	519, 909, 1857
BstAUI	TGTACA	1 cut(s)	2043
BstC8I	GCNNGC	6 cut(s)	523, 583, 665, 669, 843, 1806
BstDEI	CTNAG	8 cut(s)	410, 940, 962, 972, 1146, 1482, 1538, 1870
BstDSI	CCRYGG	3 cut(s)	903, 1070, 1621
BstEII	GGTNACC	1 cut(s)	373
BstENI	CCTNNNNNAGG	2 cut(s)	991, 2162
BstF5I	GGATG	3 cut(s)	71, 156, 1935
BstFNI	CGCG	1 cut(s)	432
BstH2I	RGCGCY	1 cut(s)	522
BstHHI	GCGC	2 cut(s)	521, 1013
BstMAI	GTCTC	7 cut(s)	89, 157, 715, 1147, 1223, 1366, 2042
BstNI	CCWGG	6 cut(s)	363, 718, 1564, 1774, 2100, 2159
BstNSI	RCATGY	1 cut(s)	1288
BstPI	GGTNACC	1 cut(s)	373
BstSCI	CCNGG	8 cut(s)	361, 556, 716, 779, 1562, 1772, 2098, 2157
BstSFI	CTRYAG	3 cut(s)	1014, 1332, 1794
BstSLI	GKGCMC	3 cut(s)	400, 1621, 2116
BstUI	CGCG	1 cut(s)	432
BstV1I	GCAGC	6 cut(s)	142, 367, 886, 1455, 1594, 2027
BstV2I	GAAGAC	2 cut(s)	128, 904
BstX2I	RGATCY	1 cut(s)	1099
BstXI	CCANNNNNNTGG	1 cut(s)	577
BstYI	RGATCY	1 cut(s)	1099
Bsu15I	ATCGAT	1 cut(s)	2062
BsuRI	GGCC	6 cut(s)	51, 366, 398, 525, 581, 650
BsuTUI	ATCGAT	1 cut(s)	2062
BtgI	CCRYGG	3 cut(s)	903, 1070, 1621
BtrI	CACGTC	1 cut(s)	1572
BtsCI	GGATG	3 cut(s)	71, 156, 1935
BtsI	GCAGTG	2 cut(s)	1047, 1731
BtsIMutI	CAGTG	4 cut(s)	999, 1047, 1555, 1731
BtuMI	TCGCGA	1 cut(s)	432
BveI	ACCTGC	3 cut(s)	916, 1016, 1339
Cac8I	GCNNGC	6 cut(s)	523, 583, 665, 669, 843, 1806
CfoI	GCGC	2 cut(s)	521, 1013
Cfr10I	RCCGGY	6 cut(s)	47, 515, 521, 581, 659, 1214
Cfr13I	GGNCC	2 cut(s)	396, 397
ClaI	ATCGAT	1 cut(s)	2062
CseI	GACGC	3 cut(s)	193, 430, 898
Csp6I	GTAC	7 cut(s)	258, 325, 422, 1288, 1560, 1723, 2044
CspCI	CAANNNNNGTGG	2 cut(s)	1240, 1275
CviQI	GTAC	7 cut(s)	258, 325, 422, 1288, 1560, 1723, 2044
DdeI	CTNAG	8 cut(s)	410, 940, 962, 972, 1146, 1482, 1538, 1870
DinI	GGCGCC	1 cut(s)	520
DraIII	CACNNNGTG	1 cut(s)	2120
DrdI	GACNNNNNNGTC	1 cut(s)	1165
DseDI	GACNNNNNNGTC	1 cut(s)	1165
EaeI	YGGCCR	2 cut(s)	49, 579
Eam1104I	CTCTTC	3 cut(s)	203, 1205, 2157
EarI	CTCTTC	3 cut(s)	203, 1205, 2157
EciI	GGCGGA	1 cut(s)	48
Ecl136II	GAGCTC	1 cut(s)	139
Eco130I	CCWWGG	6 cut(s)	330, 903, 1035, 1070, 1113, 1621
Eco24I	GRGCYC	4 cut(s)	21, 141, 400, 686
Eco31I	GGTCTC	3 cut(s)	89, 715, 1223
Eco32I	GATATC	2 cut(s)	1912, 2143
Eco53kI	GAGCTC	1 cut(s)	139
Eco57I	CTGAAG	2 cut(s)	140, 184
Eco91I	GGTNACC	1 cut(s)	373
EcoICRI	GAGCTC	1 cut(s)	139
EcoNI	CCTNNNNNAGG	2 cut(s)	991, 2162
EcoO109I	RGGNCCY	1 cut(s)	397
EcoO65I	GGTNACC	1 cut(s)	373
EcoRI	GAATTC	1 cut(s)	293
EcoRII	CCWGG	6 cut(s)	361, 716, 1562, 1772, 2098, 2157
EcoRV	GATATC	2 cut(s)	1912, 2143
EcoT14I	CCWWGG	6 cut(s)	330, 903, 1035, 1070, 1113, 1621
EcoT38I	GRGCYC	4 cut(s)	21, 141, 400, 686
EgeI	GGCGCC	1 cut(s)	520
EheI	GGCGCC	1 cut(s)	520
ErhI	CCWWGG	6 cut(s)	330, 903, 1035, 1070, 1113, 1621
FaqI	GGGAC	1 cut(s)	524
FauI	CCCGC	1 cut(s)	200
FauNDI	CATATG	2 cut(s)	1108, 1834
FbaI	TGATCA	2 cut(s)	774, 1474
FblI	GTMKAC	2 cut(s)	171, 1860
Fnu4HI	GCNGC	9 cut(s)	131, 349, 381, 534, 537, 900, 1444, 1608, 2016
FokI	GGATG	3 cut(s)	58, 143, 1942
FriOI	GRGCYC	4 cut(s)	21, 141, 400, 686
Fsp4HI	GCNGC	9 cut(s)	131, 349, 381, 534, 537, 900, 1444, 1608, 2016
FspBI	CTAG	2 cut(s)	65, 1097
GlaI	GCGC	2 cut(s)	520, 1012
GluI	GCNGC	9 cut(s)	131, 349, 381, 534, 537, 900, 1444, 1608, 2016
GsuI	CTGGAG	2 cut(s)	553, 1671
HaeII	RGCGCY	1 cut(s)	522
HaeIII	GGCC	6 cut(s)	51, 366, 398, 525, 581, 650
HapII	CCGG	8 cut(s)	48, 516, 522, 558, 582, 660, 780, 1215
HgaI	GACGC	3 cut(s)	193, 430, 898
HhaI	GCGC	2 cut(s)	521, 1013
Hin1I	GRCGYC	3 cut(s)	519, 909, 1857
Hin6I	GCGC	2 cut(s)	519, 1011
HinP1I	GCGC	2 cut(s)	519, 1011
HincII	GTYRAC	4 cut(s)	655, 1762, 1861, 2005
HindII	GTYRAC	4 cut(s)	655, 1762, 1861, 2005
HinfI	GANTC	8 cut(s)	150, 218, 311, 405, 748, 968, 1041, 1315
HpaII	CCGG	8 cut(s)	48, 516, 522, 558, 582, 660, 780, 1215
HphI	GGTGA	6 cut(s)	181, 367, 769, 997, 1945, 2003
Hpy166II	GTNNAC	7 cut(s)	172, 424, 655, 1762, 1861, 2005, 2114
Hpy188III	TCNNGA	7 cut(s)	142, 298, 431, 445, 570, 919, 1688
Hpy8I	GTNNAC	7 cut(s)	172, 424, 655, 1762, 1861, 2005, 2114
Hpy99I	CGWCG	3 cut(s)	1162, 1862, 2182
HpyAV	CCTTC	2 cut(s)	193, 274
HpyCH4III	ACNGT	8 cut(s)	257, 1003, 1389, 1559, 1652, 1753, 1798, 2036
HpyCH4IV	ACGT	7 cut(s)	174, 629, 759, 876, 1571, 1857, 2177
HpyF3I	CTNAG	8 cut(s)	410, 940, 962, 972, 1146, 1482, 1538, 1870
HpySE526I	ACGT	7 cut(s)	174, 629, 759, 876, 1571, 1857, 2177
Hsp92I	GRCGYC	3 cut(s)	519, 909, 1857
HspAI	GCGC	2 cut(s)	519, 1011
KasI	GGCGCC	1 cut(s)	518
KpnI	GGTACC	2 cut(s)	328, 1726
KroI	GCCGGC	2 cut(s)	521, 581
KroNI	GCCGGC	2 cut(s)	523, 583
Ksp22I	TGATCA	2 cut(s)	774, 1474
LguI	GCTCTTC	1 cut(s)	1205
LmnI	GCTCC	8 cut(s)	16, 136, 144, 457, 590, 689, 889, 2023
Lsp1109I	GCAGC	6 cut(s)	142, 367, 886, 1455, 1594, 2027
LweI	GCATC	5 cut(s)	912, 1061, 1145, 1237, 1681
MaeI	CTAG	2 cut(s)	65, 1097
MaeII	ACGT	7 cut(s)	174, 629, 759, 876, 1571, 1857, 2177
MaeIII	GTNAC	5 cut(s)	373, 965, 1003, 1567, 1888
MbiI	CCGCTC	1 cut(s)	452
MfeI	CAATTG	3 cut(s)	814, 1470, 1596
MflI	RGATCY	1 cut(s)	1099
MhlI	GDGCHC	9 cut(s)	21, 141, 400, 686, 894, 1152, 1507, 1621, 2116
Mly113I	GGCGCC	1 cut(s)	519
MlyI	GAGTC	5 cut(s)	159, 227, 305, 962, 1050
MmeI	TCCRAC	3 cut(s)	317, 492, 1127
MroNI	GCCGGC	2 cut(s)	521, 581
MroXI	GAANNNNTTC	2 cut(s)	284, 305
MseI	TTAA	4 cut(s)	741, 992, 1965, 1986
MslI	CAYNNNNRTG	2 cut(s)	74, 1736
MspA1I	CMGCKG	1 cut(s)	380
MspI	CCGG	8 cut(s)	48, 516, 522, 558, 582, 660, 780, 1215
MspR9I	CCNGG	8 cut(s)	363, 558, 718, 781, 1564, 1774, 2100, 2159
MunI	CAATTG	3 cut(s)	814, 1470, 1596
Mva1269I	GAATGC	2 cut(s)	1526, 2168
MvaI	CCWGG	6 cut(s)	363, 718, 1564, 1774, 2100, 2159
MvnI	CGCG	1 cut(s)	432
NaeI	GCCGGC	2 cut(s)	523, 583
NarI	GGCGCC	1 cut(s)	519
NciI	CCSGG	2 cut(s)	558, 781
NcoI	CCATGG	3 cut(s)	903, 1070, 1621
NdeI	CATATG	2 cut(s)	1108, 1834
NgoMIV	GCCGGC	2 cut(s)	521, 581
NmeAIII	GCCGAG	1 cut(s)	69
NmuCI	GTSAC	4 cut(s)	373, 965, 1003, 1567
NruI	TCGCGA	1 cut(s)	432
NspI	RCATGY	1 cut(s)	1288
PaqCI	CACCTGC	2 cut(s)	1016, 1339
PciSI	GCTCTTC	1 cut(s)	1205
PcsI	WCGNNNNNNNCGW	1 cut(s)	648
PctI	GAATGC	2 cut(s)	1526, 2168
PdiI	GCCGGC	2 cut(s)	523, 583
PdmI	GAANNNNTTC	2 cut(s)	284, 305
PfeI	GAWTC	3 cut(s)	405, 748, 1315
PflFI	GACNNNGTC	1 cut(s)	1865
PkrI	GCNGC	9 cut(s)	132, 350, 382, 535, 538, 901, 1445, 1609, 2017
PleI	GAGTC	5 cut(s)	158, 226, 305, 962, 1049
PluTI	GGCGCC	1 cut(s)	522
PpsI	GAGTC	5 cut(s)	158, 226, 305, 962, 1049
PsiI	TTATAA	1 cut(s)	737
Psp124BI	GAGCTC	1 cut(s)	141
Psp6I	CCWGG	6 cut(s)	361, 716, 1562, 1772, 2098, 2157
PspEI	GGTNACC	1 cut(s)	373
PspGI	CCWGG	6 cut(s)	361, 716, 1562, 1772, 2098, 2157
PspOMI	GGGCCC	1 cut(s)	396
PspPI	GGNCC	2 cut(s)	396, 397
PstI	CTGCAG	1 cut(s)	1336
PsuI	RGATCY	1 cut(s)	1099
PsyI	GACNNNGTC	1 cut(s)	1865
RruI	TCGCGA	1 cut(s)	432
RsaI	GTAC	7 cut(s)	259, 326, 423, 1289, 1561, 1724, 2045
RsaNI	GTAC	7 cut(s)	258, 325, 422, 1288, 1560, 1723, 2044
RseI	CAYNNNNRTG	2 cut(s)	74, 1736
SacI	GAGCTC	1 cut(s)	141
SalI	GTCGAC	1 cut(s)	1859
SapI	GCTCTTC	1 cut(s)	1205
SaqAI	TTAA	4 cut(s)	741, 992, 1965, 1986
SatI	GCNGC	9 cut(s)	131, 349, 381, 534, 537, 900, 1444, 1608, 2016
Sau96I	GGNCC	2 cut(s)	396, 397
SchI	GAGTC	5 cut(s)	159, 227, 305, 962, 1050
ScrFI	CCNGG	8 cut(s)	363, 558, 718, 781, 1564, 1774, 2100, 2159
SduI	GDGCHC	9 cut(s)	21, 141, 400, 686, 894, 1152, 1507, 1621, 2116
SfaNI	GCATC	5 cut(s)	912, 1061, 1145, 1237, 1681
SfcI	CTRYAG	3 cut(s)	1014, 1332, 1794
SfoI	GGCGCC	1 cut(s)	520
SgrAI	CRCCGGYG	1 cut(s)	515
SmiMI	CAYNNNNRTG	2 cut(s)	74, 1736
SspDI	GGCGCC	1 cut(s)	518
SspMI	CTAG	2 cut(s)	65, 1097
SstI	GAGCTC	1 cut(s)	141
StyD4I	CCNGG	8 cut(s)	361, 556, 716, 779, 1562, 1772, 2098, 2157
StyI	CCWWGG	6 cut(s)	330, 903, 1035, 1070, 1113, 1621
TaaI	ACNGT	8 cut(s)	257, 1003, 1389, 1559, 1652, 1753, 1798, 2036
TaiI	ACGT	7 cut(s)	177, 632, 762, 879, 1574, 1860, 2180
TaqI	TCGA	6 cut(s)	237, 309, 1182, 1860, 2062, 2180
TatI	WGTACW	2 cut(s)	1287, 2043
TauI	GCSGC	3 cut(s)	351, 536, 539
TfiI	GAWTC	3 cut(s)	405, 748, 1315
Tru1I	TTAA	4 cut(s)	741, 992, 1965, 1986
Tru9I	TTAA	4 cut(s)	741, 992, 1965, 1986
TscAI	CASTG	4 cut(s)	1006, 1054, 1562, 1738
TseFI	GTSAC	4 cut(s)	373, 965, 1003, 1567
TseI	GCWGC	6 cut(s)	130, 380, 899, 1443, 1607, 2015
Tsp45I	GTSAC	4 cut(s)	373, 965, 1003, 1567
TspDTI	ATGAA	3 cut(s)	175, 1178, 1836
TspGWI	ACGGA	1 cut(s)	29
TspRI	CASTG	4 cut(s)	1006, 1054, 1562, 1738
Tth111I	GACNNNGTC	1 cut(s)	1865
VneI	GTGCAC	1 cut(s)	2112
XagI	CCTNNNNNAGG	2 cut(s)	991, 2162
XapI	RAATTY	4 cut(s)	293, 852, 1378, 1919
XceI	RCATGY	1 cut(s)	1288
XcmI	CCANNNNNNNNNTGG	2 cut(s)	163, 2223
XmiI	GTMKAC	2 cut(s)	171, 1860
XmnI	GAANNNNTTC	2 cut(s)	284, 305
XspI	CTAG	2 cut(s)	65, 1097
ZraI	GACGTC	1 cut(s)	1858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.