MD15G1096900.v1.1

Aspartate aminotransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
6762146 .. 6765589
3444 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1096900.v1.1.491

Sequence Viewer

Length: 1386 bp
ATGCGCCCACAGTTAACATCACCCCACGCCCACAGTTCTTCTGTTTCTACGAGTAGTGATCGGAGGCTGAGCGCTCTGGTACGACACCTCGCTGCCGAAGAAGATCAATCGTCCTCCGCCATGGATGCTCACAACAACTCCATCTCTGCCTCGCCAGCTTCCGCCCACGCCAATTCCGTCTTCGCTCACGTCGTTCGCGCTCCCGAGGATCCAATCCTTGGGGTTACTGTTGCGTATAACAAAGATCCAAGTCCTCTGAAGTTGAATTTGGGTGTTGGCGCTTATCGAACCGAGGAGGGAAAACCACTTGTTCTTAATGTGGTGAGAAAAGCAGAGCAGCTGCTCGTTAATGACATGTCTCGCGTTAAGGAATACCTTCCAATCGTTGGACTGGCAGATTTCAATAAGCTGAGCGCTAAGCTGATTCTTGGTGCTGACAGCCCTGCTATTCAAGAGAACCGGATTACTACCGTCCAATGTCTATCGGGCACTGGCTCATTGAGAGTTGGAGGTGAATTTTTGGCAAGGCATTATCATGAACGCACAATATACATACCCCTGCCGACATGGGGAAACCACACCAAAGTTTTCACTCTGGCAGGGTTGACTGTGAAAAGTTACCGGTATTATGATCCAGCAACTCGTGGCCTTAACTTCCAAGGCCTTTTGGAAGACCTCAGCTCTGCCCCAGCTGGAGCAATTGTACTTCTCCATGCATGTGCTCATAACCCCACTGGTGTTGATCCAACCCTTGAGCAGTGGGAGCAGATCAGACAGCTTGTGAGATCAAGAGGATTATTACCGTTCTTCGACAGTGCTTATCAGGGTTTTGCTAGTGGAAGTTTGGATGGAGATGCACAGTCTGTTCGTAGGTTTGCTGCTGATGGTGGAGAGTGCCTTATTGCTCAAAGTTATGCCAAAAACATGGGTCTGTACGGCGAACGTGTTGGAGCCTTAAGCATTGTCTGCAAGAATGCTGATGTTGCAAGCAAGGTTGAGAGCCAACTGAAGCTTGTGATCAGGCCCATGTACTCGAACCCACCCATTCATGGTGCATCCATTGTAGCCACCATTCTCAAGGATAGGGACTTGTTCAACGAATGGACAATTGAGCTGAAGGCCATGGCCGATCGTATCATCAGCATGCGGCATCAGCTTTTTGAATCCTTGCGTGCTAAGGGCACACCCGGTGACTGGAGCCACATCATCAAGCAAATCGGAATGTTTACCTTCACCGGATTGAACTCCGAGCAAGTTGCCTTCATGACTAAAGAGTACCATATTTACATGACATCCGACGGGAGGATTAGCATGGCGGGTCTGAGCTCAAGGACCGTCCCTCATCTTACAGAGGCAATACATGCCGCTGTTACTCGCGCTGCATAA

Protein Analysis

462

Amino Acids

50.25

Weight (kDa)

8.53

Isoelectric Point (pI)

44.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 87 - 453 7e-98 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012838)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 218, 386
AccII CGCG 3 cut(s) 198, 363, 1377
AciI CCGC 5 cut(s) 117, 162, 1147, 1316, 1365
AclWI GGATC 5 cut(s) 203, 216, 239, 626, 737
AcoI YGGCCR 1 cut(s) 1125
AcsI RAATTY 2 cut(s) 265, 515
AcuI CTGAAG 3 cut(s) 278, 1028, 1136
AdeI CACNNNGTG 1 cut(s) 1190
AfaI GTAC 5 cut(s) 81, 705, 935, 1031, 1277
AfeI AGCGCT 2 cut(s) 73, 415
AfiI CCNNNNNNNGG 6 cut(s) 218, 386, 569, 1049, 1194, 1302
AflII CTTAAG 1 cut(s) 955
AflIII ACRYGT 2 cut(s) 354, 943
AgeI ACCGGT 1 cut(s) 621
AgsI TTSAA 6 cut(s) 265, 403, 452, 1096, 1163, 1243
AjiI CACGTC 1 cut(s) 190
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 251, 283
Alw21I GWGCWC 2 cut(s) 724, 1328
Alw26I GTCTC 1 cut(s) 363
AlwI GGATC 5 cut(s) 203, 216, 239, 626, 737
Ama87I CYCGRG 1 cut(s) 203
Aor51HI AGCGCT 2 cut(s) 73, 415
AoxI GGCC 5 cut(s) 646, 661, 1022, 1119, 1125
ApeKI GCWGC 5 cut(s) 92, 337, 340, 878, 1379
ApoI RAATTY 2 cut(s) 265, 515
AsiGI ACCGGT 1 cut(s) 621
Asp700I GAANNNNTTC 1 cut(s) 375
AspLEI GCGC 6 cut(s) 6, 74, 200, 281, 416, 1379
AspS9I GGNCC 2 cut(s) 1023, 1332
AsuC2I CCSGG 1 cut(s) 1188
AsuHPI GGTGA 5 cut(s) 12, 334, 524, 1202, 1225
AvaI CYCGRG 1 cut(s) 203
AvaII GGWCC 1 cut(s) 1332
BaeGI GKGCMC 2 cut(s) 491, 1184
BamHI GGATCC 1 cut(s) 208
BanII GRGCYC 1 cut(s) 1328
BauI CACGAG 1 cut(s) 642
BbsI GAAGAC 2 cut(s) 172, 678
Bbv12I GWGCWC 2 cut(s) 724, 1328
BbvCI CCTCAGC 1 cut(s) 677
BbvI GCAGC 5 cut(s) 79, 327, 349, 865, 1366
BccI CCATC 3 cut(s) 149, 842, 878
BceAI ACGGC 1 cut(s) 952
BcgI CGANNNNNNTGC 2 cut(s) 1238, 1272
BclI TGATCA 1 cut(s) 1017
BcnI CCSGG 1 cut(s) 1188
BcoDI GTCTC 1 cut(s) 363
BfaI CTAG 1 cut(s) 834
BfoI RGCGCY 3 cut(s) 75, 282, 417
BfrI CTTAAG 1 cut(s) 955
BisI GCNGC 7 cut(s) 93, 338, 341, 879, 1148, 1365, 1380
BlpI GCTNAGC 3 cut(s) 68, 410, 417
BlsI GCNGC 7 cut(s) 94, 339, 342, 880, 1149, 1366, 1381
Bme1390I CCNGG 1 cut(s) 1188
Bme18I GGWCC 1 cut(s) 1332
BmeT110I CYCGRG 1 cut(s) 203
BmgBI CACGTC 1 cut(s) 190
BmgT120I GGNCC 2 cut(s) 1023, 1332
BmiI GGNNCC 3 cut(s) 210, 952, 1199
BmrFI CCNGG 1 cut(s) 1188
BmsI GCATC 4 cut(s) 115, 844, 1064, 1159
BpiI GAAGAC 2 cut(s) 172, 678
BpmI CTGGAG 2 cut(s) 714, 1216
Bpu10I CCTNAGC 2 cut(s) 677, 1176
Bpu1102I GCTNAGC 3 cut(s) 68, 410, 417
BpuEI CTTGAG 3 cut(s) 773, 1061, 1312
BpuMI CCSGG 1 cut(s) 1188
BsaJI CCNNGG 6 cut(s) 120, 204, 217, 291, 658, 1122
BsaWI WCCGGW 3 cut(s) 459, 621, 1235
BsaXI ACNNNNNCTCC 4 cut(s) 122, 152, 687, 717
Bsc4I CCNNNNNNNGG 6 cut(s) 218, 386, 569, 1049, 1194, 1302
Bse118I RCCGGY 1 cut(s) 621
Bse1I ACTGG 4 cut(s) 396, 496, 739, 1199
BseDI CCNNGG 6 cut(s) 120, 204, 217, 291, 658, 1122
BseGI GGATG 4 cut(s) 130, 853, 1055, 1292
BseLI CCNNNNNNNGG 6 cut(s) 218, 386, 569, 1049, 1194, 1302
BseMII CTCAG 4 cut(s) 59, 401, 691, 1313
BseNI ACTGG 4 cut(s) 396, 496, 739, 1199
BseRI GAGGAG 1 cut(s) 308
BseSI GKGCMC 2 cut(s) 491, 1184
BseXI GCAGC 5 cut(s) 79, 327, 349, 865, 1366
BseYI CCCAGC 1 cut(s) 688
Bsh1236I CGCG 3 cut(s) 198, 363, 1377
Bsh1285I CGRYCG 1 cut(s) 1132
BshFI GGCC 5 cut(s) 648, 663, 1024, 1121, 1127
BshTI ACCGGT 1 cut(s) 621
BsiEI CGRYCG 1 cut(s) 1132
BsiHKAI GWGCWC 2 cut(s) 724, 1328
BsiHKCI CYCGRG 1 cut(s) 203
BsiSI CCGG 4 cut(s) 460, 622, 1188, 1236
BslFI GGGAC 2 cut(s) 1100, 1322
BslI CCNNNNNNNGG 6 cut(s) 218, 386, 569, 1049, 1194, 1302
BsmAI GTCTC 1 cut(s) 363
BsmFI GGGAC 2 cut(s) 1100, 1322
BsmI GAATGC 1 cut(s) 979
BsnI GGCC 5 cut(s) 648, 663, 1024, 1121, 1127
BsoBI CYCGRG 1 cut(s) 203
Bsp1286I GDGCHC 4 cut(s) 491, 724, 1184, 1328
Bsp1720I GCTNAGC 3 cut(s) 68, 410, 417
Bsp19I CCATGG 2 cut(s) 120, 1122
BspACI CCGC 5 cut(s) 117, 162, 1147, 1316, 1365
BspANI GGCC 5 cut(s) 648, 663, 1024, 1121, 1127
BspCNI CTCAG 4 cut(s) 60, 402, 690, 1314
BspFNI CGCG 3 cut(s) 198, 363, 1377
BspHI TCATGA 2 cut(s) 535, 1263
BspLI GGNNCC 3 cut(s) 210, 952, 1199
BspPI GGATC 5 cut(s) 203, 216, 239, 626, 737
BspTI CTTAAG 1 cut(s) 955
BsrFI RCCGGY 1 cut(s) 621
BsrI ACTGG 4 cut(s) 396, 496, 739, 1199
BssAI RCCGGY 1 cut(s) 621
BssECI CCNNGG 6 cut(s) 120, 204, 217, 291, 658, 1122
BssSI CACGAG 1 cut(s) 642
BssT1I CCWWGG 4 cut(s) 120, 217, 658, 1122
Bst2BI CACGAG 1 cut(s) 642
Bst4CI ACNGT 9 cut(s) 12, 35, 229, 472, 610, 804, 815, 861, 1336
BstAFI CTTAAG 1 cut(s) 955
BstAPI GCANNNNNTGC 2 cut(s) 966, 1361
BstC8I GCNNGC 4 cut(s) 156, 988, 1145, 1173
BstDEI CTNAG 6 cut(s) 68, 410, 417, 677, 1176, 1322
BstDSI CCRYGG 2 cut(s) 120, 1122
BstF5I GGATG 4 cut(s) 130, 853, 1055, 1292
BstFNI CGCG 3 cut(s) 198, 363, 1377
BstH2I RGCGCY 3 cut(s) 75, 282, 417
BstHHI GCGC 6 cut(s) 6, 74, 200, 281, 416, 1379
BstMAI GTCTC 1 cut(s) 363
BstMCI CGRYCG 1 cut(s) 1132
BstMWI GCNNNNNNNGC 7 cut(s) 125, 155, 763, 966, 983, 1153, 1361
BstNSI RCATGY 4 cut(s) 358, 720, 1147, 1364
BstSCI CCNGG 1 cut(s) 1186
BstSLI GKGCMC 2 cut(s) 491, 1184
BstUI CGCG 3 cut(s) 198, 363, 1377
BstV1I GCAGC 5 cut(s) 79, 327, 349, 865, 1366
BstV2I GAAGAC 2 cut(s) 172, 678
BstX2I RGATCY 2 cut(s) 208, 244
BstXI CCANNNNNNTGG 1 cut(s) 925
BstYI RGATCY 2 cut(s) 208, 244
BsuRI GGCC 5 cut(s) 648, 663, 1024, 1121, 1127
BtgI CCRYGG 2 cut(s) 120, 1122
BtrI CACGTC 1 cut(s) 190
BtsCI GGATG 4 cut(s) 130, 853, 1055, 1292
BtsI GCAGTG 1 cut(s) 764
BtsIMutI CAGTG 4 cut(s) 489, 732, 764, 820
Cac8I GCNNGC 4 cut(s) 156, 988, 1145, 1173
CciI TCATGA 2 cut(s) 535, 1263
CfoI GCGC 6 cut(s) 6, 74, 200, 281, 416, 1379
Cfr10I RCCGGY 1 cut(s) 621
Cfr13I GGNCC 2 cut(s) 1023, 1332
Csp6I GTAC 5 cut(s) 80, 704, 934, 1030, 1276
CspAI ACCGGT 1 cut(s) 621
CspCI CAANNNNNGTGG 2 cut(s) 721, 756
CviQI GTAC 5 cut(s) 80, 704, 934, 1030, 1276
DdeI CTNAG 6 cut(s) 68, 410, 417, 677, 1176, 1322
DraIII CACNNNGTG 1 cut(s) 1190
EaeI YGGCCR 1 cut(s) 1125
EciI GGCGGA 2 cut(s) 106, 151
Ecl136II GAGCTC 1 cut(s) 1326
Eco130I CCWWGG 4 cut(s) 120, 217, 658, 1122
Eco147I AGGCCT 1 cut(s) 663
Eco24I GRGCYC 1 cut(s) 1328
Eco47I GGWCC 1 cut(s) 1332
Eco47III AGCGCT 2 cut(s) 73, 415
Eco53kI GAGCTC 1 cut(s) 1326
Eco57I CTGAAG 3 cut(s) 278, 1028, 1136
Eco88I CYCGRG 1 cut(s) 203
EcoICRI GAGCTC 1 cut(s) 1326
EcoT14I CCWWGG 4 cut(s) 120, 217, 658, 1122
EcoT22I ATGCAT 1 cut(s) 718
EcoT38I GRGCYC 1 cut(s) 1328
ErhI CCWWGG 4 cut(s) 120, 217, 658, 1122
FaqI GGGAC 2 cut(s) 1100, 1322
FauI CCCGC 1 cut(s) 1309
FbaI TGATCA 1 cut(s) 1017
Fnu4HI GCNGC 7 cut(s) 93, 338, 341, 879, 1148, 1365, 1380
FokI GGATG 4 cut(s) 137, 860, 1042, 1279
FriOI GRGCYC 1 cut(s) 1328
Fsp4HI GCNGC 7 cut(s) 93, 338, 341, 879, 1148, 1365, 1380
FspBI CTAG 1 cut(s) 834
GlaI GCGC 6 cut(s) 5, 73, 199, 280, 415, 1378
GluI GCNGC 7 cut(s) 93, 338, 341, 879, 1148, 1365, 1380
GsaI CCCAGC 1 cut(s) 692
GsuI CTGGAG 2 cut(s) 714, 1216
HaeII RGCGCY 3 cut(s) 75, 282, 417
HaeIII GGCC 5 cut(s) 648, 663, 1024, 1121, 1127
HapII CCGG 4 cut(s) 460, 622, 1188, 1236
HhaI GCGC 6 cut(s) 6, 74, 200, 281, 416, 1379
Hin6I GCGC 6 cut(s) 4, 72, 198, 279, 414, 1377
HinP1I GCGC 6 cut(s) 4, 72, 198, 279, 414, 1377
HincII GTYRAC 2 cut(s) 15, 606
HindII GTYRAC 2 cut(s) 15, 606
HindIII AAGCTT 1 cut(s) 1010
HinfI GANTC 2 cut(s) 424, 1163
HpaI GTTAAC 1 cut(s) 15
HpaII CCGG 4 cut(s) 460, 622, 1188, 1236
HphI GGTGA 5 cut(s) 12, 334, 524, 1202, 1225
Hpy166II GTNNAC 3 cut(s) 15, 606, 1227
Hpy188I TCNGA 7 cut(s) 63, 258, 773, 1220, 1249, 1297, 1323
Hpy188III TCNNGA 5 cut(s) 203, 452, 536, 789, 1264
Hpy8I GTNNAC 3 cut(s) 15, 606, 1227
Hpy99I CGWCG 2 cut(s) 194, 1301
HpyAV CCTTC 4 cut(s) 386, 1111, 1240, 1270
HpyCH4III ACNGT 9 cut(s) 12, 35, 229, 472, 610, 804, 815, 861, 1336
HpyCH4IV ACGT 2 cut(s) 189, 943
HpyCH4V TGCA 6 cut(s) 716, 857, 969, 986, 1055, 1382
HpyF10VI GCNNNNNNNGC 7 cut(s) 125, 155, 763, 966, 983, 1153, 1361
HpyF3I CTNAG 6 cut(s) 68, 410, 417, 677, 1176, 1322
HpySE526I ACGT 2 cut(s) 189, 943
HspAI GCGC 6 cut(s) 4, 72, 198, 279, 414, 1377
Ksp22I TGATCA 1 cut(s) 1017
KspAI GTTAAC 1 cut(s) 15
LmnI GCTCC 5 cut(s) 205, 695, 763, 950, 1197
Lsp1109I GCAGC 5 cut(s) 79, 327, 349, 865, 1366
LweI GCATC 4 cut(s) 115, 844, 1064, 1159
MaeI CTAG 1 cut(s) 834
MaeII ACGT 2 cut(s) 189, 943
MaeIII GTNAC 4 cut(s) 223, 617, 1190, 1369
MboII GAAGA 6 cut(s) 30, 110, 113, 172, 683, 799
MfeI CAATTG 2 cut(s) 699, 1107
MflI RGATCY 2 cut(s) 208, 244
MhlI GDGCHC 4 cut(s) 491, 724, 1184, 1328
MluCI AATT 5 cut(s) 172, 265, 515, 699, 1107
MmeI TCCRAC 5 cut(s) 367, 487, 770, 928, 1320
Mph1103I ATGCAT 1 cut(s) 718
MroXI GAANNNNTTC 1 cut(s) 375
MseI TTAA 6 cut(s) 14, 315, 348, 366, 651, 956
MslI CAYNNNNRTG 3 cut(s) 534, 717, 1142
MspA1I CMGCKG 3 cut(s) 340, 692, 1367
MspCI CTTAAG 1 cut(s) 955
MspI CCGG 4 cut(s) 460, 622, 1188, 1236
MspR9I CCNGG 1 cut(s) 1188
MunI CAATTG 2 cut(s) 699, 1107
Mva1269I GAATGC 1 cut(s) 979
MvnI CGCG 3 cut(s) 198, 363, 1377
MwoI GCNNNNNNNGC 7 cut(s) 125, 155, 763, 966, 983, 1153, 1361
NciI CCSGG 1 cut(s) 1188
NcoI CCATGG 2 cut(s) 120, 1122
NlaIV GGNNCC 3 cut(s) 210, 952, 1199
NmuCI GTSAC 1 cut(s) 1190
NsiI ATGCAT 1 cut(s) 718
NspI RCATGY 4 cut(s) 358, 720, 1147, 1364
PaeI GCATGC 1 cut(s) 1147
PagI TCATGA 2 cut(s) 535, 1263
PceI AGGCCT 1 cut(s) 663
PciI ACATGT 1 cut(s) 354
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 189
PctI GAATGC 1 cut(s) 979
PdmI GAANNNNTTC 1 cut(s) 375
PfeI GAWTC 2 cut(s) 424, 1163
PflMI CCANNNNNTGG 2 cut(s) 218, 386
PinAI ACCGGT 1 cut(s) 621
PkrI GCNGC 7 cut(s) 94, 339, 342, 880, 1149, 1366, 1381
Ple19I CGATCG 1 cut(s) 1132
PscI ACATGT 1 cut(s) 354
Psp124BI GAGCTC 1 cut(s) 1328
PspFI CCCAGC 1 cut(s) 688
PspN4I GGNNCC 3 cut(s) 210, 952, 1199
PspPI GGNCC 2 cut(s) 1023, 1332
PsuI RGATCY 2 cut(s) 208, 244
PvuI CGATCG 1 cut(s) 1132
PvuII CAGCTG 2 cut(s) 340, 692
RsaI GTAC 5 cut(s) 81, 705, 935, 1031, 1277
RsaNI GTAC 5 cut(s) 80, 704, 934, 1030, 1276
RseI CAYNNNNRTG 3 cut(s) 534, 717, 1142
SacI GAGCTC 1 cut(s) 1328
SaqAI TTAA 6 cut(s) 14, 315, 348, 366, 651, 956
SatI GCNGC 7 cut(s) 93, 338, 341, 879, 1148, 1365, 1380
Sau96I GGNCC 2 cut(s) 1023, 1332
ScrFI CCNGG 1 cut(s) 1188
SduI GDGCHC 4 cut(s) 491, 724, 1184, 1328
SfaNI GCATC 4 cut(s) 115, 844, 1064, 1159
SinI GGWCC 1 cut(s) 1332
SmiMI CAYNNNNRTG 3 cut(s) 534, 717, 1142
SmlI CTYRAG 4 cut(s) 752, 955, 1076, 1327
SmoI CTYRAG 4 cut(s) 752, 955, 1076, 1327
SphI GCATGC 1 cut(s) 1147
Sse9I AATT 5 cut(s) 172, 265, 515, 699, 1107
SseBI AGGCCT 1 cut(s) 663
SsiI CCGC 5 cut(s) 117, 162, 1147, 1316, 1365
SspMI CTAG 1 cut(s) 834
SstI GAGCTC 1 cut(s) 1328
StuI AGGCCT 1 cut(s) 663
StyD4I CCNGG 1 cut(s) 1186
StyI CCWWGG 4 cut(s) 120, 217, 658, 1122
TaaI ACNGT 9 cut(s) 12, 35, 229, 472, 610, 804, 815, 861, 1336
TaiI ACGT 2 cut(s) 192, 946
TaqI TCGA 3 cut(s) 286, 810, 1034
TasI AATT 5 cut(s) 172, 265, 515, 699, 1107
TatI WGTACW 2 cut(s) 703, 1029
TauI GCSGC 2 cut(s) 1150, 1367
TfiI GAWTC 2 cut(s) 424, 1163
Tru1I TTAA 6 cut(s) 14, 315, 348, 366, 651, 956
Tru9I TTAA 6 cut(s) 14, 315, 348, 366, 651, 956
TscAI CASTG 4 cut(s) 496, 739, 764, 820
TseFI GTSAC 1 cut(s) 1190
TseI GCWGC 5 cut(s) 92, 337, 340, 878, 1379
Tsp45I GTSAC 1 cut(s) 1190
TspDTI ATGAA 3 cut(s) 552, 1037, 1252
TspGWI ACGGA 1 cut(s) 166
TspRI CASTG 4 cut(s) 496, 739, 764, 820
Van91I CCANNNNNTGG 2 cut(s) 218, 386
Vha464I CTTAAG 1 cut(s) 955
VpaK11BI GGWCC 1 cut(s) 1332
XapI RAATTY 2 cut(s) 265, 515
XceI RCATGY 4 cut(s) 358, 720, 1147, 1364
XmnI GAANNNNTTC 1 cut(s) 375
XspI CTAG 1 cut(s) 834
Zsp2I ATGCAT 1 cut(s) 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.