Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0021216.1

Orthogroup ID

OG0012838

Physical Location & Seq

Genomic Coordinates Reverse (-)

1146 .. 4373

Gene Structure 3228 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0021216.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

atgagcccacagttcacatcaccaccaaacagcgacgcccatagttctccttctcctccttcttcttcttcttcttcttcaatttcttcagccagtgatcgcaggcttagcgctctcgtacgtcacctcaccgctgaaggatcgtctccgatggactcactctccgcttccccgaccgccgcacgtgccgattccgtcttcgctcacgtcgttcaaggtcctgaggatcccatacttggggtgacggttgcgtataacaaggatcaaagccctaataaggtgaatttgggagttggtgcttatcgaacagaggagggaaaaccacttgtgttgaatgtagtgagaaaagcagaacagaagcttgttaatgacatgtcacgggttaaggaatatcttcctattgttggactggctgagttcaataaattgagtgctaagctgattcttggtgctgacagccctcctgttcaagagaaccgggttaccactgtccaatgtctgtcaggaactgggtcattgagggttggaggtgaatttttggccaggcattaccatgaacgcaccatatatatacccacaccgacatgggggaaccacaccaaagttttcactctggcggggttatctgtgaaaaattaccggtattatgatccagcaacacgtggcctcaatttccaaggcctcttagaagaccttggttctgccccagctggagcagttgtacttcttcatgcatgtgctcataaccccactggtgttgatccaacccttgagcagtgggagcagatcagacagcttatgagatcaagagctttattaccattctttgacagtgcttatcagggttttgctagtgggagtttggacgcagatgcacagtctgttcgtaggtttgctgctgatggtggggagttgctggtagctcaaagttacgcaaaaaacatgggtctgtatggggaacgtgtcggtgccctaagcattgttttgaagacttctgaggttgcaaccaaggttgagagtcagctgaagcttgtgatcaggcccatgtattcaaacccacctattcatggtgcatctattgtagctaccattctcaaggatagggacctgttcaatgaatggacaattgaattgaaggcaatggctgaccgaattatcagcatgcgacatcaactgtttgactccttgcgtgccaagggcactcctggtgactggagtcacataatcaagcagattggaatgtttactttcacaggattgaacccagagcaagttgcttttatgactaaagagtaccatatttacatgacatctgatgggaggattagcatggctggtctgagttccaggacggtccctcatcttactgaagcaatacatgcagctgttactcgtcatgcctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004069 GO:0005488 GO:0005507 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005777 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006103 GO:0006520 GO:0006522 GO:0006531 GO:0006536 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008483 GO:0009060 GO:0009064 GO:0009066 GO:0009078 GO:0009506 GO:0009536 GO:0009987 GO:0010150 GO:0015980 GO:0016020 GO:0016740 GO:0016769 GO:0016999 GO:0017144 GO:0019752 GO:0030054 GO:0030312 GO:0031090 GO:0032501 GO:0032502 GO:0042579 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045333 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0051186 GO:0055044 GO:0055114 GO:0071704 GO:0071944 GO:0072350 GO:0090693 GO:0098588 GO:0098805 GO:0099402 GO:1901564 GO:1901605

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko00270 ko00330 ko00350 ko00360 ko00400 ko00710 ko00950 ko00960 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00220 map00250 map00270 map00330 map00350 map00360 map00400 map00710 map00950 map00960 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

467

Amino Acids

50.74

Weight (kDa)

8.65

Isoelectric Point (pI)

49.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11520
fragaria_vesca	FvH4_2g36030 FvH4_2g36030
malus_domestica	MD08G1117500.v1.1 MD15G1096900.v1.1
prunus_persica	Prupe.1G451900_v2.0.a1
pyrus_communis	pycom08g09810 pycom15g08900
rosa_chinensis	RchiOBHm_Chr6g0305821
rosa_laevigata	RLG00000010855
rosa_multiflora	Rmu_sc0001809.1_g000042 Rmu_sc0021216.1_g000002
rosa_roxburghii	Rroxscaffold_7G00162300
rosa_rugosa	Rorug06G0344000
rosa_samantha	Rh6AG455900 Rh6BG445200 Rh6CG469900
rosa_wichuraiana	Rw6G039780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	968
AciI	CCGC	5 cut(s)	132, 165, 177, 180, 617
AclWI	GGATC	6 cut(s)	148, 221, 234, 270, 644, 755
AcoI	YGGCCR	1 cut(s)	540
AcsI	RAATTY	2 cut(s)	283, 533
AcuI	CTGAAG	4 cut(s)	72, 156, 1046, 1389
AcvI	CACGTG	2 cut(s)	185, 662
AcyI	GRCGYC	1 cut(s)	36
AfaI	GTAC	3 cut(s)	120, 723, 1295
AfeI	AGCGCT	1 cut(s)	112
AfiI	CCNNNNNNNGG	6 cut(s)	236, 237, 277, 404, 587, 1067
AflIII	ACRYGT	3 cut(s)	372, 659, 961
AgeI	ACCGGT	1 cut(s)	639
AjiI	CACGTC	1 cut(s)	208
AjnI	CCWGG	3 cut(s)	542, 1204, 1346
Alw21I	GWGCWC	1 cut(s)	742
Alw26I	GTCTC	1 cut(s)	150
AlwI	GGATC	6 cut(s)	148, 221, 234, 270, 644, 755
AlwNI	CAGNNNCTG	1 cut(s)	509
Aor51HI	AGCGCT	1 cut(s)	112
AoxI	GGCC	4 cut(s)	540, 664, 679, 1040
ApeKI	GCWGC	2 cut(s)	896, 1382
ApoI	RAATTY	2 cut(s)	283, 533
AsiGI	ACCGGT	1 cut(s)	639
Asp700I	GAANNNNTTC	1 cut(s)	393
AspLEI	GCGC	1 cut(s)	113
AspS9I	GGNCC	4 cut(s)	218, 1041, 1105, 1354
AsuC2I	CCSGG	1 cut(s)	479
AsuHPI	GGTGA	7 cut(s)	12, 116, 121, 253, 292, 542, 1220
AvaII	GGWCC	3 cut(s)	218, 1105, 1354
AxyI	CCTNAGG	1 cut(s)	222
BaeGI	GKGCMC	2 cut(s)	973, 1202
BalI	TGGCCA	1 cut(s)	542
BamHI	GGATCC	1 cut(s)	226
BanI	GGYRCC	1 cut(s)	968
BanII	GRGCYC	1 cut(s)	8
BbrPI	CACGTG	2 cut(s)	185, 662
BbsI	GAAGAC	3 cut(s)	190, 696, 995
Bbv12I	GWGCWC	1 cut(s)	742
BbvI	GCAGC	2 cut(s)	883, 1394
BccI	CCATC	3 cut(s)	145, 896, 1310
BciT130I	CCWGG	3 cut(s)	544, 1206, 1348
BclI	TGATCA	1 cut(s)	1035
BcnI	CCSGG	1 cut(s)	479
BcoDI	GTCTC	1 cut(s)	150
BfaI	CTAG	1 cut(s)	852
BfoI	RGCGCY	1 cut(s)	114
BisI	GCNGC	3 cut(s)	180, 897, 1383
BlpI	GCTNAGC	2 cut(s)	107, 435
BlsI	GCNGC	3 cut(s)	181, 898, 1384
Bme1390I	CCNGG	4 cut(s)	479, 544, 1206, 1348
Bme18I	GGWCC	3 cut(s)	218, 1105, 1354
BmgBI	CACGTC	1 cut(s)	208
BmgT120I	GGNCC	4 cut(s)	218, 1041, 1105, 1354
BmiI	GGNNCC	5 cut(s)	228, 593, 970, 1106, 1356
BmrFI	CCNGG	4 cut(s)	479, 544, 1206, 1348
BmrI	ACTGGG	1 cut(s)	519
BmsI	GCATC	2 cut(s)	862, 1082
BmuI	ACTGGG	1 cut(s)	519
BoxI	GACNNNNGTC	1 cut(s)	1215
BpiI	GAAGAC	3 cut(s)	190, 696, 995
BpmI	CTGGAG	2 cut(s)	732, 1234
Bpu10I	CCTNAGC	1 cut(s)	974
Bpu1102I	GCTNAGC	2 cut(s)	107, 435
BpuEI	CTTGAG	2 cut(s)	791, 1079
BpuMI	CCSGG	1 cut(s)	479
BsaAI	YACGTR	2 cut(s)	185, 662
BsaHI	GRCGYC	1 cut(s)	36
BsaJI	CCNNGG	4 cut(s)	676, 694, 1008, 1194
BsaWI	WCCGGW	1 cut(s)	639
BsaXI	ACNNNNNCTCC	4 cut(s)	146, 176, 705, 735
Bsc4I	CCNNNNNNNGG	6 cut(s)	236, 237, 277, 404, 587, 1067
Bse118I	RCCGGY	1 cut(s)	639
Bse1I	ACTGG	5 cut(s)	93, 414, 514, 757, 1217
Bse21I	CCTNAGG	1 cut(s)	222
Bse3DI	GCAATG	1 cut(s)	1146
BseBI	CCWGG	3 cut(s)	544, 1206, 1348
BseDI	CCNNGG	4 cut(s)	676, 694, 1008, 1194
BseLI	CCNNNNNNNGG	6 cut(s)	236, 237, 277, 404, 587, 1067
BseMI	GCAATG	1 cut(s)	1146
BseMII	CTCAG	4 cut(s)	213, 405, 987, 1331
BseNI	ACTGG	5 cut(s)	93, 414, 514, 757, 1217
BseRI	GAGGAG	2 cut(s)	45, 326
BseSI	GKGCMC	2 cut(s)	973, 1202
BseXI	GCAGC	2 cut(s)	883, 1394
BseYI	CCCAGC	1 cut(s)	706
Bsh1285I	CGRYCG	1 cut(s)	177
BshFI	GGCC	4 cut(s)	542, 666, 681, 1042
BshNI	GGYRCC	1 cut(s)	968
BshTI	ACCGGT	1 cut(s)	639
BsiEI	CGRYCG	1 cut(s)	177
BsiHKAI	GWGCWC	1 cut(s)	742
BsiSI	CCGG	2 cut(s)	478, 640
BsiWI	CGTACG	1 cut(s)	118
BslFI	GGGAC	2 cut(s)	1118, 1340
BslI	CCNNNNNNNGG	6 cut(s)	236, 237, 277, 404, 587, 1067
BsmAI	GTCTC	1 cut(s)	150
BsmBI	CGTCTC	1 cut(s)	150
BsmFI	GGGAC	2 cut(s)	1118, 1340
BsnI	GGCC	4 cut(s)	542, 666, 681, 1042
Bsp1286I	GDGCHC	4 cut(s)	8, 742, 973, 1202
Bsp143I	GATC	9 cut(s)	97, 140, 226, 262, 649, 760, 786, 803, 1035
Bsp1720I	GCTNAGC	2 cut(s)	107, 435
BspACI	CCGC	5 cut(s)	132, 165, 177, 180, 617
BspANI	GGCC	4 cut(s)	542, 666, 681, 1042
BspCNI	CTCAG	4 cut(s)	214, 406, 988, 1332
BspLI	GGNNCC	5 cut(s)	228, 593, 970, 1106, 1356
BspPI	GGATC	6 cut(s)	148, 221, 234, 270, 644, 755
BspT107I	GGYRCC	1 cut(s)	968
BsrDI	GCAATG	1 cut(s)	1146
BsrFI	RCCGGY	1 cut(s)	639
BsrI	ACTGG	5 cut(s)	93, 414, 514, 757, 1217
BssAI	RCCGGY	1 cut(s)	639
BssECI	CCNNGG	4 cut(s)	676, 694, 1008, 1194
BssMI	GATC	9 cut(s)	97, 140, 226, 262, 649, 760, 786, 803, 1035
BssNI	GRCGYC	1 cut(s)	36
BssT1I	CCWWGG	4 cut(s)	676, 694, 1008, 1194
Bst2UI	CCWGG	3 cut(s)	544, 1206, 1348
Bst4CI	ACNGT	7 cut(s)	12, 247, 490, 833, 879, 1176, 1354
BstACI	GRCGYC	1 cut(s)	36
BstAPI	GCANNNNNTGC	1 cut(s)	1379
BstBAI	YACGTR	2 cut(s)	185, 662
BstC8I	GCNNGC	3 cut(s)	104, 1163, 1191
BstDEI	CTNAG	8 cut(s)	107, 222, 414, 435, 685, 974, 996, 1340
BstEII	GGTNACC	1 cut(s)	481
BstH2I	RGCGCY	1 cut(s)	114
BstHHI	GCGC	1 cut(s)	113
BstKTI	GATC	9 cut(s)	100, 143, 229, 265, 652, 763, 789, 806, 1038
BstMAI	GTCTC	1 cut(s)	150
BstMBI	GATC	9 cut(s)	97, 140, 226, 262, 649, 760, 786, 803, 1035
BstMCI	CGRYCG	1 cut(s)	177
BstMWI	GCNNNNNNNGC	4 cut(s)	108, 185, 781, 1379
BstNI	CCWGG	3 cut(s)	544, 1206, 1348
BstNSI	RCATGY	4 cut(s)	376, 738, 1165, 1382
BstPAI	GACNNNNGTC	1 cut(s)	1215
BstPI	GGTNACC	1 cut(s)	481
BstSCI	CCNGG	4 cut(s)	477, 542, 1204, 1346
BstSLI	GKGCMC	2 cut(s)	973, 1202
BstV1I	GCAGC	2 cut(s)	883, 1394
BstV2I	GAAGAC	3 cut(s)	190, 696, 995
BstX2I	RGATCY	1 cut(s)	226
BstYI	RGATCY	1 cut(s)	226
Bsu36I	CCTNAGG	1 cut(s)	222
BsuRI	GGCC	4 cut(s)	542, 666, 681, 1042
BtrI	CACGTC	1 cut(s)	208
BtsI	GCAGTG	1 cut(s)	782
BtsIMutI	CAGTG	5 cut(s)	100, 486, 750, 782, 838
Cac8I	GCNNGC	3 cut(s)	104, 1163, 1191
CaiI	CAGNNNCTG	1 cut(s)	509
CfoI	GCGC	1 cut(s)	113
Cfr10I	RCCGGY	1 cut(s)	639
Cfr13I	GGNCC	4 cut(s)	218, 1041, 1105, 1354
CseI	GACGC	2 cut(s)	44, 875
Csp6I	GTAC	3 cut(s)	119, 722, 1294
CspAI	ACCGGT	1 cut(s)	639
CspCI	CAANNNNNGTGG	4 cut(s)	312, 347, 739, 774
CviQI	GTAC	3 cut(s)	119, 722, 1294
DdeI	CTNAG	8 cut(s)	107, 222, 414, 435, 685, 974, 996, 1340
DpnI	GATC	9 cut(s)	99, 142, 228, 264, 651, 762, 788, 805, 1037
DpnII	GATC	9 cut(s)	97, 140, 226, 262, 649, 760, 786, 803, 1035
EaeI	YGGCCR	1 cut(s)	540
Eco130I	CCWWGG	4 cut(s)	676, 694, 1008, 1194
Eco147I	AGGCCT	1 cut(s)	681
Eco24I	GRGCYC	1 cut(s)	8
Eco47I	GGWCC	3 cut(s)	218, 1105, 1354
Eco47III	AGCGCT	1 cut(s)	112
Eco57I	CTGAAG	4 cut(s)	72, 156, 1046, 1389
Eco72I	CACGTG	2 cut(s)	185, 662
Eco81I	CCTNAGG	1 cut(s)	222
Eco91I	GGTNACC	1 cut(s)	481
EcoO109I	RGGNCCY	2 cut(s)	218, 1105
EcoO65I	GGTNACC	1 cut(s)	481
EcoRII	CCWGG	3 cut(s)	542, 1204, 1346
EcoT14I	CCWWGG	4 cut(s)	676, 694, 1008, 1194
EcoT22I	ATGCAT	1 cut(s)	736
EcoT38I	GRGCYC	1 cut(s)	8
ErhI	CCWWGG	4 cut(s)	676, 694, 1008, 1194
Esp3I	CGTCTC	1 cut(s)	150
FaqI	GGGAC	2 cut(s)	1118, 1340
FauI	CCCGC	1 cut(s)	610
FbaI	TGATCA	1 cut(s)	1035
Fnu4HI	GCNGC	3 cut(s)	180, 897, 1383
FriOI	GRGCYC	1 cut(s)	8
Fsp4HI	GCNGC	3 cut(s)	180, 897, 1383
FspBI	CTAG	1 cut(s)	852
GlaI	GCGC	1 cut(s)	112
GluI	GCNGC	3 cut(s)	180, 897, 1383
GsaI	CCCAGC	1 cut(s)	710
GsuI	CTGGAG	2 cut(s)	732, 1234
HaeII	RGCGCY	1 cut(s)	114
HaeIII	GGCC	4 cut(s)	542, 666, 681, 1042
HapII	CCGG	2 cut(s)	478, 640
HgaI	GACGC	2 cut(s)	44, 875
HhaI	GCGC	1 cut(s)	113
Hin1I	GRCGYC	1 cut(s)	36
Hin6I	GCGC	1 cut(s)	111
HinP1I	GCGC	1 cut(s)	111
HindIII	AAGCTT	2 cut(s)	359, 1028
HinfI	GANTC	6 cut(s)	155, 191, 442, 1018, 1181, 1216
HpaII	CCGG	2 cut(s)	478, 640
HphI	GGTGA	7 cut(s)	12, 116, 121, 253, 292, 542, 1220
Hpy166II	GTNNAC	2 cut(s)	15, 1245
Hpy188I	TCNGA	5 cut(s)	150, 791, 997, 1315, 1341
Hpy188III	TCNNGA	4 cut(s)	221, 470, 504, 807
Hpy8I	GTNNAC	2 cut(s)	15, 1245
Hpy99I	CGWCG	2 cut(s)	38, 212
HpyAV	CCTTC	4 cut(s)	60, 69, 131, 1129
HpyCH4III	ACNGT	7 cut(s)	12, 247, 490, 833, 879, 1176, 1354
HpyCH4IV	ACGT	5 cut(s)	121, 184, 207, 661, 961
HpyCH4V	TGCA	5 cut(s)	734, 875, 1004, 1073, 1382
HpyF10VI	GCNNNNNNNGC	4 cut(s)	108, 185, 781, 1379
HpyF3I	CTNAG	8 cut(s)	107, 222, 414, 435, 685, 974, 996, 1340
HpySE526I	ACGT	5 cut(s)	121, 184, 207, 661, 961
Hsp92I	GRCGYC	1 cut(s)	36
HspAI	GCGC	1 cut(s)	111
Ksp22I	TGATCA	1 cut(s)	1035
Kzo9I	GATC	9 cut(s)	97, 140, 226, 262, 649, 760, 786, 803, 1035
LmnI	GCTCC	2 cut(s)	713, 781
Lsp1109I	GCAGC	2 cut(s)	883, 1394
LweI	GCATC	2 cut(s)	862, 1082
MaeI	CTAG	1 cut(s)	852
MaeII	ACGT	5 cut(s)	121, 184, 207, 661, 961
MaeIII	GTNAC	8 cut(s)	122, 241, 375, 481, 929, 1208, 1217, 1387
MalI	GATC	9 cut(s)	99, 142, 228, 264, 651, 762, 788, 805, 1037
MboI	GATC	9 cut(s)	97, 140, 226, 262, 649, 760, 786, 803, 1035
MfeI	CAATTG	1 cut(s)	1125
MflI	RGATCY	1 cut(s)	226
MhlI	GDGCHC	4 cut(s)	8, 742, 973, 1202
MlsI	TGGCCA	1 cut(s)	542
MluCI	AATT	9 cut(s)	81, 283, 425, 533, 634, 670, 1125, 1130, 1152
MluNI	TGGCCA	1 cut(s)	542
MlyI	GAGTC	4 cut(s)	149, 1027, 1175, 1225
MmeI	TCCRAC	3 cut(s)	385, 505, 788
Mox20I	TGGCCA	1 cut(s)	542
Mph1103I	ATGCAT	1 cut(s)	736
MroXI	GAANNNNTTC	1 cut(s)	393
MscI	TGGCCA	1 cut(s)	542
MseI	TTAA	2 cut(s)	366, 384
MslI	CAYNNNNRTG	3 cut(s)	552, 583, 735
Msp20I	TGGCCA	1 cut(s)	542
MspA1I	CMGCKG	4 cut(s)	134, 710, 1024, 1385
MspI	CCGG	2 cut(s)	478, 640
MspR9I	CCNGG	4 cut(s)	479, 544, 1206, 1348
MunI	CAATTG	1 cut(s)	1125
MvaI	CCWGG	3 cut(s)	544, 1206, 1348
MwoI	GCNNNNNNNGC	4 cut(s)	108, 185, 781, 1379
NciI	CCSGG	1 cut(s)	479
NdeII	GATC	9 cut(s)	97, 140, 226, 262, 649, 760, 786, 803, 1035
NlaIV	GGNNCC	5 cut(s)	228, 593, 970, 1106, 1356
NmuCI	GTSAC	5 cut(s)	122, 241, 375, 1208, 1217
NsiI	ATGCAT	1 cut(s)	736
NspI	RCATGY	4 cut(s)	376, 738, 1165, 1382
PaeI	GCATGC	1 cut(s)	1165
PceI	AGGCCT	1 cut(s)	681
PciI	ACATGT	1 cut(s)	372
PcsI	WCGNNNNNNNCGW	1 cut(s)	207
PdmI	GAANNNNTTC	1 cut(s)	393
PfeI	GAWTC	2 cut(s)	191, 442
Pfl23II	CGTACG	1 cut(s)	118
PfoI	TCCNGGA	1 cut(s)	1346
PinAI	ACCGGT	1 cut(s)	639
PkrI	GCNGC	3 cut(s)	181, 898, 1384
PleI	GAGTC	4 cut(s)	149, 1026, 1175, 1224
PmaCI	CACGTG	2 cut(s)	185, 662
PmlI	CACGTG	2 cut(s)	185, 662
PpsI	GAGTC	4 cut(s)	149, 1026, 1175, 1224
Ppu21I	YACGTR	2 cut(s)	185, 662
PpuMI	RGGWCCY	2 cut(s)	218, 1105
PscI	ACATGT	1 cut(s)	372
PshAI	GACNNNNGTC	1 cut(s)	1215
Psp5II	RGGWCCY	2 cut(s)	218, 1105
Psp6I	CCWGG	3 cut(s)	542, 1204, 1346
PspCI	CACGTG	2 cut(s)	185, 662
PspEI	GGTNACC	1 cut(s)	481
PspFI	CCCAGC	1 cut(s)	706
PspGI	CCWGG	3 cut(s)	542, 1204, 1346
PspLI	CGTACG	1 cut(s)	118
PspN4I	GGNNCC	5 cut(s)	228, 593, 970, 1106, 1356
PspPI	GGNCC	4 cut(s)	218, 1041, 1105, 1354
PspPPI	RGGWCCY	2 cut(s)	218, 1105
PstNI	CAGNNNCTG	1 cut(s)	509
PsuI	RGATCY	1 cut(s)	226
PvuII	CAGCTG	3 cut(s)	710, 1024, 1385
RsaI	GTAC	3 cut(s)	120, 723, 1295
RsaNI	GTAC	3 cut(s)	119, 722, 1294
RseI	CAYNNNNRTG	3 cut(s)	552, 583, 735
SaqAI	TTAA	2 cut(s)	366, 384
SatI	GCNGC	3 cut(s)	180, 897, 1383
Sau3AI	GATC	9 cut(s)	97, 140, 226, 262, 649, 760, 786, 803, 1035
Sau96I	GGNCC	4 cut(s)	218, 1041, 1105, 1354
SchI	GAGTC	4 cut(s)	149, 1027, 1175, 1225
ScrFI	CCNGG	4 cut(s)	479, 544, 1206, 1348
SduI	GDGCHC	4 cut(s)	8, 742, 973, 1202
SfaNI	GCATC	2 cut(s)	862, 1082
SinI	GGWCC	3 cut(s)	218, 1105, 1354
SmiMI	CAYNNNNRTG	3 cut(s)	552, 583, 735
SmlI	CTYRAG	2 cut(s)	770, 1094
SmoI	CTYRAG	2 cut(s)	770, 1094
SphI	GCATGC	1 cut(s)	1165
Sse9I	AATT	9 cut(s)	81, 283, 425, 533, 634, 670, 1125, 1130, 1152
SseBI	AGGCCT	1 cut(s)	681
SsiI	CCGC	5 cut(s)	132, 165, 177, 180, 617
SspMI	CTAG	1 cut(s)	852
StuI	AGGCCT	1 cut(s)	681
StyD4I	CCNGG	4 cut(s)	477, 542, 1204, 1346
StyI	CCWWGG	4 cut(s)	676, 694, 1008, 1194
TaaI	ACNGT	7 cut(s)	12, 247, 490, 833, 879, 1176, 1354
TaiI	ACGT	5 cut(s)	124, 187, 210, 664, 964
TaqI	TCGA	1 cut(s)	304
TaqII	GACCGA	1 cut(s)	1164
TasI	AATT	9 cut(s)	81, 283, 425, 533, 634, 670, 1125, 1130, 1152
TatI	WGTACW	1 cut(s)	721
TauI	GCSGC	1 cut(s)	182
TfiI	GAWTC	2 cut(s)	191, 442
Tru1I	TTAA	2 cut(s)	366, 384
Tru9I	TTAA	2 cut(s)	366, 384
TscAI	CASTG	5 cut(s)	100, 493, 757, 782, 838
TseFI	GTSAC	5 cut(s)	122, 241, 375, 1208, 1217
TseI	GCWGC	2 cut(s)	896, 1382
Tsp45I	GTSAC	5 cut(s)	122, 241, 375, 1208, 1217
TspDTI	ATGAA	4 cut(s)	570, 719, 1055, 1131
TspGWI	ACGGA	1 cut(s)	184
TspRI	CASTG	5 cut(s)	100, 493, 757, 782, 838
VpaK11BI	GGWCC	3 cut(s)	218, 1105, 1354
XapI	RAATTY	2 cut(s)	283, 533
XceI	RCATGY	4 cut(s)	376, 738, 1165, 1382
XmnI	GAANNNNTTC	1 cut(s)	393
XspI	CTAG	1 cut(s)	852
Zsp2I	ATGCAT	1 cut(s)	736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.