Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0009093

Physical Location & Seq

Genomic Coordinates Reverse (-)

22557617 .. 22563108

Gene Structure 5492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1263800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGTGGCGCTGCGTTTCTCGTGGGCTTGGCGTTTCTTCCTCCAAGAGATCCGCCTCCGGTGACTCTCTTAGATCTCACTTCCCCAGGCTCTTCTCCTCCGAATCCGCTACAGGACGTTCTCCGTACACTGTGGTGGATCATACTTATGATGCTGTGGTTGTCGGGGCTGGTGGTGCAGGGCTGAGAGCAGCCATCGGACTTTCAGAGCATGGATTTAACACCGCTTGCATTACTAAGCTTTTTCCAACTCGTTCACACACCGTTGCAGCCCAGGGTGGTATAAATGCTGCATTAGGAAATATGACTGAGGATGACTGGAGATGGCACATGTATGACACAGTCAAAGGAAGCGATTGGCTGGGTGATCAAGATGCCATCCAATATATGTGTAGAGAGGCTCCGAAAGCTGTGATTGAACTTGAGAATTATGGATTGCCATTTTCTCGAACTGAAGATGGAAGAATATATCAACGTGCATTTGGTGGTCAAAGTCTTGACTTTGGAAAAGGTGGACAGGCATACCGCTGTGCTTGTGCCGCTGACAGAACTGGGCATGCTCTATTGCATACTCTCTATGGACAAGCTATGAAACATAATACACAATTTTTTGTTGAATACTTTGCTTTGGATCTTTTAATGGACAGTGAGGGGACCTGCCAAGGAGTCATTGCATTAAATATGGAGGATGGGACTTTACATCGGTTCCAAGCATCATCAACAATTTTGGCCACAGGGGGTTATGGTAGAGCTTATTTTTCTGCAACCTCAGCCCATACCTGCACTGGAGATGGTAATGCCATGGTTGCACGTGCTGGGCTCCCGCTTCAGGATTTGGAGTTTGTGCAGTTTCACCCTACTGGTATATATGGTGCTGGGTGCCTCATCACTGAAGGATCACGAGGGGAAGGTGGTATCCTAAGAAATAGTGAAGGTGAGCGATTTATGGAACGATATGCCCCTACAGCGAAAGATCTTGCTTCTAGGGATGTTGTGTCGAGATCTATGACTATGGAAATCCGGGAGGGTCGTGGTGTAGGACCTTTGAAGGACCACATCTATCTCCACTTGAATCATTTGCCCCCAGATGTACTGAAGGAGAGGCTTCCTGGTATCTCTGAAACCGCTGCCATTTTCGCTGGTGTGGATGTTACAAAGGAGCCTATTCCTGTCTTACCTACTGTGCACTATAATATGGGTGGAATTCCAACAAATTACCACGGAGAGGTACTTACCATCAAAGGAGATGATCCAGATTCAATAATACCTGGGTTAATGGCAGCGGGGGAGACAGCCTGTGCATCTGTTCACGGTGCCAATCGGCTTGGTGCAAATTCACTCCTTGACATTGTTGTTTTTGGTCGAGCTTGTGCAAATAGAGTTGCAGAGATCCATAAACCGGGGGAGAAACAAAAGCCTCTGGCAAAGGATGCTGGAGAGAAGACCATTGCATGGTTGGACAAAATAAGGAATTCTAATGGCTCATTACCAACTTCAAAAATCCGGTTGAATATGCAACGAATAATGCAAAATAATGCTGCTGTGTTCCGCACACAGGAAACATTAGAAGAAGGTGCTCAGTTGATTGACAAGGCTTGGGAGAGCTTTCATGAGGTTCAATTGAAGGATCGGAGTTTGATATGGAACTCTGACTTGATAGAGACCATAGAGTTGGAAAACCTTTTGATAAATGCCTGTATCACCATGCATTCTGCTGAAGCCAGGAAAGAAAGCAGAGGAGCACATGCTCGTGAAGACTTCACGACAAGGGATGATGAGAAATGGATAAAACATACATTGGGATACTGGGAAAATGAGAAGGTCCGACTAGACTACAGACCGGTTCACATGAACACATTAGATGATGAAATCGAGACATTCCCACCTAAAGCTCGTGTCTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000104 GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005746 GO:0005749 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006119 GO:0006121 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009055 GO:0009060 GO:0009061 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009987 GO:0015980 GO:0016020 GO:0016310 GO:0016491 GO:0016627 GO:0016999 GO:0017076 GO:0017144 GO:0019637 GO:0019693 GO:0019752 GO:0019866 GO:0022900 GO:0022904 GO:0030312 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0034641 GO:0035639 GO:0036094 GO:0042773 GO:0042775 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045257 GO:0045273 GO:0045281 GO:0045283 GO:0045333 GO:0046034 GO:0046483 GO:0046872 GO:0046914 GO:0050897 GO:0055086 GO:0055114 GO:0070469 GO:0071704 GO:0071944 GO:0072350 GO:0072521 GO:0097159 GO:0097367 GO:0098796 GO:0098798 GO:0098800 GO:0098803 GO:1901135 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00020 ko00190 ko01100 ko01110 ko01120 ko01130 ko01200 ko04714 ko04932 ko05010 ko05012 ko05016 map00020 map00190 map01100 map01110 map01120 map01130 map01200 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

FAD_binding_2 Succ_DH_flav_C

Protein Analysis

634

Amino Acids

69.6

Weight (kDa)

6.04

Isoelectric Point (pI)

37.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_2	PF00890	50 - 446	8.4e-126	FAD binding domain
Succ_DH_flav_C	PF02910	501 - 633	3.6e-46	Fumarate reductase flavoprotein C-term

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18450 AT5G66760
fragaria_vesca	FvH4_1g13410 FvH4_1g13410 FvH4_1g13410
malus_domestica	MD02G1148900.v1.1 MD15G1263800.v1.1
prunus_persica	Prupe.7G153600_v2.0.a1 Prupe.7G153600_v2.0.a1 Prupe.7G153600_v2.0.a1
pyrus_communis	pycom02g11730 pycom15g22970
rosa_chinensis	RchiOBHm_Chr2g0101771
rosa_laevigata	RLG00000017100
rosa_multiflora	Rmu_sc0003504.1_g000004
rosa_roxburghii	Rroxscaffold_2G00141040
rosa_rugosa	Rorug02G0101900
rosa_samantha	Rh2AG149200 Rh2BG154800 Rh2CG155100 Rh2DG155000
rosa_wichuraiana	Rw2G011660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	662, 785
AccB1I	GGYRCC	2 cut(s)	876, 1310
AccB7I	CCANNNNNTGG	1 cut(s)	1449
AccI	GTMKAC	1 cut(s)	1896
AciI	CCGC	9 cut(s)	51, 105, 222, 523, 537, 821, 1122, 1280, 1546
AclWI	GGATC	7 cut(s)	42, 144, 636, 901, 1241, 1381, 1632
AcoI	YGGCCR	1 cut(s)	726
AcsI	RAATTY	3 cut(s)	1200, 1330, 1468
AcuI	CTGAAG	5 cut(s)	471, 809, 909, 1112, 1734
AcvI	CACGTG	1 cut(s)	809
AfaI	GTAC	3 cut(s)	125, 1089, 1227
AfiI	CCNNNNNNNGG	5 cut(s)	826, 1222, 1396, 1449, 1552
AflIII	ACRYGT	1 cut(s)	327
AgeI	ACCGGT	1 cut(s)	1837
AgsI	TTSAA	9 cut(s)	416, 614, 1045, 1069, 1257, 1494, 1507, 1616, 1621
AjnI	CCWGG	5 cut(s)	83, 270, 1105, 1264, 1718
AleI	CACNNNNGTG	1 cut(s)	131
AluBI	AGCT	7 cut(s)	238, 407, 584, 749, 1364, 1602, 1889
AluI	AGCT	7 cut(s)	238, 407, 584, 749, 1364, 1602, 1889
Alw21I	GWGCWC	3 cut(s)	1185, 1576, 1741
Alw26I	GTCTC	3 cut(s)	1280, 1652, 1865
Alw44I	GTGCAC	1 cut(s)	1181
AlwI	GGATC	7 cut(s)	42, 144, 636, 901, 1241, 1381, 1632
AoxI	GGCC	1 cut(s)	726
ApaLI	GTGCAC	1 cut(s)	1181
ApeKI	GCWGC	7 cut(s)	9, 188, 266, 287, 1124, 1277, 1535
ApoI	RAATTY	3 cut(s)	1200, 1330, 1468
AsiGI	ACCGGT	1 cut(s)	1837
AspLEI	GCGC	1 cut(s)	9
AspS9I	GGNCC	4 cut(s)	651, 1037, 1048, 1819
AsuC2I	CCSGG	2 cut(s)	1019, 1398
AsuHPI	GGTGA	5 cut(s)	71, 374, 842, 944, 1690
AvaII	GGWCC	4 cut(s)	651, 1037, 1048, 1819
BaeGI	GKGCMC	1 cut(s)	1185
BalI	TGGCCA	1 cut(s)	728
BanI	GGYRCC	2 cut(s)	876, 1310
BanII	GRGCYC	1 cut(s)	819
BauI	CACGAG	4 cut(s)	18, 897, 1746, 1890
BbrPI	CACGTG	1 cut(s)	809
BbsI	GAAGAC	2 cut(s)	1445, 1758
Bbv12I	GWGCWC	3 cut(s)	1185, 1576, 1741
BbvCI	CCTCAGC	1 cut(s)	766
BbvI	GCAGC	6 cut(s)	200, 274, 278, 1111, 1289, 1522
BccI	CCATC	7 cut(s)	200, 315, 383, 449, 680, 782, 1241
BciT130I	CCWGG	5 cut(s)	85, 272, 1107, 1266, 1720
BciVI	GTATCC	2 cut(s)	923, 1793
BclI	TGATCA	1 cut(s)	364
BcnI	CCSGG	2 cut(s)	1019, 1398
BcoDI	GTCTC	3 cut(s)	1280, 1652, 1865
BfaI	CTAG	2 cut(s)	981, 1826
BfmI	CTRYAG	3 cut(s)	108, 960, 1831
BfoI	RGCGCY	1 cut(s)	10
BfuAI	ACCTGC	2 cut(s)	662, 785
BfuI	GTATCC	2 cut(s)	923, 1793
BglII	AGATCT	3 cut(s)	71, 970, 998
BisI	GCNGC	8 cut(s)	10, 189, 267, 288, 537, 1125, 1278, 1536
BlsI	GCNGC	8 cut(s)	11, 190, 268, 289, 538, 1126, 1279, 1537
Bme1390I	CCNGG	7 cut(s)	85, 272, 1019, 1107, 1266, 1398, 1720
Bme18I	GGWCC	4 cut(s)	651, 1037, 1048, 1819
BmgT120I	GGNCC	4 cut(s)	651, 1037, 1048, 1819
BmiI	GGNNCC	7 cut(s)	399, 652, 704, 818, 878, 1158, 1312
BmrFI	CCNGG	7 cut(s)	85, 272, 1019, 1107, 1266, 1398, 1720
BmrI	ACTGGG	2 cut(s)	558, 1813
BmsI	GCATC	5 cut(s)	139, 361, 719, 1307, 1417
BmuI	ACTGGG	2 cut(s)	558, 1813
BpiI	GAAGAC	2 cut(s)	1445, 1758
BpmI	CTGGAG	3 cut(s)	337, 804, 1452
Bpu10I	CCTNAGC	1 cut(s)	766
BpuEI	CTTGAG	1 cut(s)	440
BpuMI	CCSGG	2 cut(s)	1019, 1398
BsaAI	YACGTR	1 cut(s)	809
BsaI	GGTCTC	1 cut(s)	1652
BsaJI	CCNNGG	8 cut(s)	83, 270, 271, 658, 798, 1216, 1265, 1397
BsaWI	WCCGGW	3 cut(s)	56, 1500, 1837
Bsc4I	CCNNNNNNNGG	5 cut(s)	826, 1222, 1396, 1449, 1552
Bse118I	RCCGGY	1 cut(s)	1837
Bse1I	ACTGG	5 cut(s)	320, 553, 787, 862, 1808
Bse3DI	GCAATG	2 cut(s)	666, 1443
BseBI	CCWGG	5 cut(s)	85, 272, 1107, 1266, 1720
BseDI	CCNNGG	8 cut(s)	83, 270, 271, 658, 798, 1216, 1265, 1397
BseGI	GGATG	7 cut(s)	316, 375, 691, 991, 1150, 1432, 1774
BseLI	CCNNNNNNNGG	5 cut(s)	826, 1222, 1396, 1449, 1552
BseMI	GCAATG	2 cut(s)	666, 1443
BseMII	CTCAG	4 cut(s)	173, 297, 780, 1589
BseNI	ACTGG	5 cut(s)	320, 553, 787, 862, 1808
BseRI	GAGGAG	2 cut(s)	85, 1749
BseSI	GKGCMC	1 cut(s)	1185
BseXI	GCAGC	6 cut(s)	200, 274, 278, 1111, 1289, 1522
BseYI	CCCAGC	3 cut(s)	358, 812, 872
BsgI	GTGCAG	3 cut(s)	195, 763, 863
BshFI	GGCC	1 cut(s)	728
BshNI	GGYRCC	2 cut(s)	876, 1310
BshTI	ACCGGT	1 cut(s)	1837
BsiHKAI	GWGCWC	3 cut(s)	1185, 1576, 1741
BsiSI	CCGG	5 cut(s)	57, 1018, 1397, 1501, 1838
BslFI	GGGAC	2 cut(s)	664, 703
BslI	CCNNNNNNNGG	5 cut(s)	826, 1222, 1396, 1449, 1552
BsmAI	GTCTC	3 cut(s)	1280, 1652, 1865
BsmFI	GGGAC	2 cut(s)	664, 703
BsmI	GAATGC	1 cut(s)	1705
BsnI	GGCC	1 cut(s)	728
Bso31I	GGTCTC	1 cut(s)	1652
Bsp1286I	GDGCHC	4 cut(s)	819, 1185, 1576, 1741
Bsp19I	CCATGG	1 cut(s)	798
BspACI	CCGC	9 cut(s)	51, 105, 222, 523, 537, 821, 1122, 1280, 1546
BspANI	GGCC	1 cut(s)	728
BspCNI	CTCAG	4 cut(s)	174, 298, 779, 1588
BspHI	TCATGA	1 cut(s)	1606
BspLI	GGNNCC	7 cut(s)	399, 652, 704, 818, 878, 1158, 1312
BspMI	ACCTGC	2 cut(s)	662, 785
BspPI	GGATC	7 cut(s)	42, 144, 636, 901, 1241, 1381, 1632
BspQI	GCTCTTC	1 cut(s)	95
BspT107I	GGYRCC	2 cut(s)	876, 1310
BspTNI	GGTCTC	1 cut(s)	1652
BsrDI	GCAATG	2 cut(s)	666, 1443
BsrFI	RCCGGY	1 cut(s)	1837
BsrI	ACTGG	5 cut(s)	320, 553, 787, 862, 1808
BssAI	RCCGGY	1 cut(s)	1837
BssECI	CCNNGG	8 cut(s)	83, 270, 271, 658, 798, 1216, 1265, 1397
BssSI	CACGAG	4 cut(s)	18, 897, 1746, 1890
BssT1I	CCWWGG	2 cut(s)	658, 798
Bst2BI	CACGAG	4 cut(s)	18, 897, 1746, 1890
Bst2UI	CCWGG	5 cut(s)	85, 272, 1107, 1266, 1720
Bst4CI	ACNGT	6 cut(s)	130, 262, 340, 644, 1180, 1310
Bst6I	CTCTTC	1 cut(s)	95
BstAPI	GCANNNNNTGC	1 cut(s)	1427
BstBAI	YACGTR	1 cut(s)	809
BstC8I	GCNNGC	2 cut(s)	226, 555
BstDEI	CTNAG	7 cut(s)	68, 182, 234, 306, 766, 917, 1575
BstDSI	CCRYGG	2 cut(s)	798, 1216
BstF5I	GGATG	7 cut(s)	316, 375, 691, 991, 1150, 1432, 1774
BstH2I	RGCGCY	1 cut(s)	10
BstHHI	GCGC	1 cut(s)	9
BstMAI	GTCTC	3 cut(s)	1280, 1652, 1865
BstMWI	GCNNNNNNNGC	8 cut(s)	173, 404, 536, 767, 803, 962, 1133, 1427
BstNI	CCWGG	5 cut(s)	85, 272, 1107, 1266, 1720
BstNSI	RCATGY	3 cut(s)	331, 557, 1745
BstSCI	CCNGG	7 cut(s)	83, 270, 1017, 1105, 1264, 1396, 1718
BstSFI	CTRYAG	3 cut(s)	108, 960, 1831
BstSLI	GKGCMC	1 cut(s)	1185
BstV1I	GCAGC	6 cut(s)	200, 274, 278, 1111, 1289, 1522
BstV2I	GAAGAC	2 cut(s)	1445, 1758
BstX2I	RGATCY	6 cut(s)	47, 71, 628, 970, 998, 1386
BstXI	CCANNNNNNTGG	1 cut(s)	1669
BstYI	RGATCY	6 cut(s)	47, 71, 628, 970, 998, 1386
BsuI	GTATCC	2 cut(s)	923, 1793
BsuRI	GGCC	1 cut(s)	728
BtgI	CCRYGG	2 cut(s)	798, 1216
BtsCI	GGATG	7 cut(s)	316, 375, 691, 991, 1150, 1432, 1774
BtsIMutI	CAGTG	4 cut(s)	126, 649, 780, 885
BveI	ACCTGC	2 cut(s)	662, 785
Cac8I	GCNNGC	2 cut(s)	226, 555
CciI	TCATGA	1 cut(s)	1606
CfoI	GCGC	1 cut(s)	9
Cfr10I	RCCGGY	1 cut(s)	1837
Cfr13I	GGNCC	4 cut(s)	651, 1037, 1048, 1819
Csp6I	GTAC	3 cut(s)	124, 1088, 1226
CspAI	ACCGGT	1 cut(s)	1837
CviAII	CATG	9 cut(s)	209, 328, 554, 799, 1449, 1607, 1702, 1742, 1846
CviQI	GTAC	3 cut(s)	124, 1088, 1226
DdeI	CTNAG	7 cut(s)	68, 182, 234, 306, 766, 917, 1575
EaeI	YGGCCR	1 cut(s)	726
Eam1104I	CTCTTC	1 cut(s)	95
EarI	CTCTTC	1 cut(s)	95
EciI	GGCGGA	1 cut(s)	40
Eco130I	CCWWGG	2 cut(s)	658, 798
Eco24I	GRGCYC	1 cut(s)	819
Eco31I	GGTCTC	1 cut(s)	1652
Eco47I	GGWCC	4 cut(s)	651, 1037, 1048, 1819
Eco57I	CTGAAG	5 cut(s)	471, 809, 909, 1112, 1734
Eco72I	CACGTG	1 cut(s)	809
EcoO109I	RGGNCCY	2 cut(s)	651, 1037
EcoRI	GAATTC	2 cut(s)	1200, 1468
EcoRII	CCWGG	5 cut(s)	83, 270, 1105, 1264, 1718
EcoT14I	CCWWGG	2 cut(s)	658, 798
EcoT22I	ATGCAT	1 cut(s)	1707
EcoT38I	GRGCYC	1 cut(s)	819
ErhI	CCWWGG	2 cut(s)	658, 798
FaeI	CATG	9 cut(s)	212, 331, 557, 802, 1452, 1610, 1705, 1745, 1849
FaqI	GGGAC	2 cut(s)	664, 703
FatI	CATG	9 cut(s)	208, 327, 553, 798, 1448, 1606, 1701, 1741, 1845
FauI	CCCGC	2 cut(s)	828, 1273
FbaI	TGATCA	1 cut(s)	364
FblI	GTMKAC	1 cut(s)	1896
Fnu4HI	GCNGC	8 cut(s)	10, 189, 267, 288, 537, 1125, 1278, 1536
FokI	GGATG	7 cut(s)	323, 362, 698, 998, 1157, 1439, 1781
FriOI	GRGCYC	1 cut(s)	819
Fsp4HI	GCNGC	8 cut(s)	10, 189, 267, 288, 537, 1125, 1278, 1536
FspBI	CTAG	2 cut(s)	981, 1826
GlaI	GCGC	1 cut(s)	8
GluI	GCNGC	8 cut(s)	10, 189, 267, 288, 537, 1125, 1278, 1536
GsaI	CCCAGC	3 cut(s)	362, 816, 876
GsuI	CTGGAG	3 cut(s)	337, 804, 1452
HaeII	RGCGCY	1 cut(s)	10
HaeIII	GGCC	1 cut(s)	728
HapII	CCGG	5 cut(s)	57, 1018, 1397, 1501, 1838
HhaI	GCGC	1 cut(s)	9
Hin1II	CATG	9 cut(s)	212, 331, 557, 802, 1452, 1610, 1705, 1745, 1849
Hin6I	GCGC	1 cut(s)	7
HinP1I	GCGC	1 cut(s)	7
HindIII	AAGCTT	1 cut(s)	236
HinfI	GANTC	5 cut(s)	62, 101, 663, 1069, 1253
HpaII	CCGG	5 cut(s)	57, 1018, 1397, 1501, 1838
HphI	GGTGA	5 cut(s)	71, 374, 842, 944, 1690
Hpy166II	GTNNAC	7 cut(s)	126, 254, 512, 1183, 1306, 1843, 1897
Hpy188I	TCNGA	8 cut(s)	100, 197, 205, 402, 1117, 1629, 1648, 1823
Hpy8I	GTNNAC	7 cut(s)	126, 254, 512, 1183, 1306, 1843, 1897
HpyAV	CCTTC	8 cut(s)	884, 899, 923, 1039, 1087, 1562, 1615, 1810
HpyCH4III	ACNGT	6 cut(s)	130, 262, 340, 644, 1180, 1310
HpyCH4IV	ACGT	3 cut(s)	115, 472, 808
HpyF10VI	GCNNNNNNNGC	8 cut(s)	173, 404, 536, 767, 803, 962, 1133, 1427
HpyF3I	CTNAG	7 cut(s)	68, 182, 234, 306, 766, 917, 1575
HpySE526I	ACGT	3 cut(s)	115, 472, 808
Hsp92II	CATG	9 cut(s)	212, 331, 557, 802, 1452, 1610, 1705, 1745, 1849
HspAI	GCGC	1 cut(s)	7
Ksp22I	TGATCA	1 cut(s)	364
LguI	GCTCTTC	1 cut(s)	95
LmnI	GCTCC	4 cut(s)	403, 822, 1156, 1736
Lsp1109I	GCAGC	6 cut(s)	200, 274, 278, 1111, 1289, 1522
LweI	GCATC	5 cut(s)	139, 361, 719, 1307, 1417
MaeI	CTAG	2 cut(s)	981, 1826
MaeII	ACGT	3 cut(s)	115, 472, 808
MaeIII	GTNAC	2 cut(s)	59, 1147
MboII	GAAGA	7 cut(s)	27, 82, 464, 471, 1450, 1577, 1763
MfeI	CAATTG	1 cut(s)	1616
MflI	RGATCY	6 cut(s)	47, 71, 628, 970, 998, 1386
MhlI	GDGCHC	4 cut(s)	819, 1185, 1576, 1741
MlsI	TGGCCA	1 cut(s)	728
MluCI	AATT	8 cut(s)	424, 602, 720, 1200, 1210, 1330, 1468, 1616
MluNI	TGGCCA	1 cut(s)	728
MlyI	GAGTC	2 cut(s)	56, 672
MmeI	TCCRAC	5 cut(s)	269, 1229, 1434, 1650, 1846
Mox20I	TGGCCA	1 cut(s)	728
Mph1103I	ATGCAT	1 cut(s)	1707
MscI	TGGCCA	1 cut(s)	728
MseI	TTAA	4 cut(s)	216, 635, 674, 1271
MslI	CAYNNNNRTG	4 cut(s)	131, 144, 330, 1746
Msp20I	TGGCCA	1 cut(s)	728
MspA1I	CMGCKG	4 cut(s)	525, 539, 1124, 1280
MspI	CCGG	5 cut(s)	57, 1018, 1397, 1501, 1838
MspR9I	CCNGG	7 cut(s)	85, 272, 1019, 1107, 1266, 1398, 1720
MunI	CAATTG	1 cut(s)	1616
Mva1269I	GAATGC	1 cut(s)	1705
MvaI	CCWGG	5 cut(s)	85, 272, 1107, 1266, 1720
MwoI	GCNNNNNNNGC	8 cut(s)	173, 404, 536, 767, 803, 962, 1133, 1427
NciI	CCSGG	2 cut(s)	1019, 1398
NcoI	CCATGG	1 cut(s)	798
NlaIII	CATG	9 cut(s)	212, 331, 557, 802, 1452, 1610, 1705, 1745, 1849
NlaIV	GGNNCC	7 cut(s)	399, 652, 704, 818, 878, 1158, 1312
NmuCI	GTSAC	1 cut(s)	59
NsiI	ATGCAT	1 cut(s)	1707
NspI	RCATGY	3 cut(s)	331, 557, 1745
OliI	CACNNNNGTG	1 cut(s)	131
PaeI	GCATGC	1 cut(s)	557
PagI	TCATGA	1 cut(s)	1606
PasI	CCCWGGG	1 cut(s)	271
PciI	ACATGT	1 cut(s)	327
PciSI	GCTCTTC	1 cut(s)	95
PctI	GAATGC	1 cut(s)	1705
PfeI	GAWTC	3 cut(s)	101, 1069, 1253
PflFI	GACNNNGTC	1 cut(s)	338
PflMI	CCANNNNNTGG	1 cut(s)	1449
PfoI	TCCNGGA	1 cut(s)	1017
PinAI	ACCGGT	1 cut(s)	1837
PkrI	GCNGC	8 cut(s)	11, 190, 268, 289, 538, 1126, 1279, 1537
PleI	GAGTC	2 cut(s)	56, 671
PmaCI	CACGTG	1 cut(s)	809
PmlI	CACGTG	1 cut(s)	809
PpsI	GAGTC	2 cut(s)	56, 671
Ppu21I	YACGTR	1 cut(s)	809
PpuMI	RGGWCCY	2 cut(s)	651, 1037
PscI	ACATGT	1 cut(s)	327
Psp5II	RGGWCCY	2 cut(s)	651, 1037
Psp6I	CCWGG	5 cut(s)	83, 270, 1105, 1264, 1718
PspCI	CACGTG	1 cut(s)	809
PspFI	CCCAGC	3 cut(s)	358, 812, 872
PspGI	CCWGG	5 cut(s)	83, 270, 1105, 1264, 1718
PspN4I	GGNNCC	7 cut(s)	399, 652, 704, 818, 878, 1158, 1312
PspPI	GGNCC	4 cut(s)	651, 1037, 1048, 1819
PspPPI	RGGWCCY	2 cut(s)	651, 1037
PsuI	RGATCY	6 cut(s)	47, 71, 628, 970, 998, 1386
PsyI	GACNNNGTC	1 cut(s)	338
RsaI	GTAC	3 cut(s)	125, 1089, 1227
RsaNI	GTAC	3 cut(s)	124, 1088, 1226
RseI	CAYNNNNRTG	4 cut(s)	131, 144, 330, 1746
SapI	GCTCTTC	1 cut(s)	95
SaqAI	TTAA	4 cut(s)	216, 635, 674, 1271
SatI	GCNGC	8 cut(s)	10, 189, 267, 288, 537, 1125, 1278, 1536
Sau96I	GGNCC	4 cut(s)	651, 1037, 1048, 1819
SchI	GAGTC	2 cut(s)	56, 672
ScrFI	CCNGG	7 cut(s)	85, 272, 1019, 1107, 1266, 1398, 1720
SduI	GDGCHC	4 cut(s)	819, 1185, 1576, 1741
SfaNI	GCATC	5 cut(s)	139, 361, 719, 1307, 1417
SfcI	CTRYAG	3 cut(s)	108, 960, 1831
SinI	GGWCC	4 cut(s)	651, 1037, 1048, 1819
SmiMI	CAYNNNNRTG	4 cut(s)	131, 144, 330, 1746
SmlI	CTYRAG	1 cut(s)	419
SmoI	CTYRAG	1 cut(s)	419
SphI	GCATGC	1 cut(s)	557
Sse9I	AATT	8 cut(s)	424, 602, 720, 1200, 1210, 1330, 1468, 1616
SsiI	CCGC	9 cut(s)	51, 105, 222, 523, 537, 821, 1122, 1280, 1546
SspMI	CTAG	2 cut(s)	981, 1826
StyD4I	CCNGG	7 cut(s)	83, 270, 1017, 1105, 1264, 1396, 1718
StyI	CCWWGG	2 cut(s)	658, 798
TaaI	ACNGT	6 cut(s)	130, 262, 340, 644, 1180, 1310
TaiI	ACGT	3 cut(s)	118, 475, 811
TaqI	TCGA	4 cut(s)	445, 995, 1360, 1869
TasI	AATT	8 cut(s)	424, 602, 720, 1200, 1210, 1330, 1468, 1616
TatI	WGTACW	1 cut(s)	1087
TauI	GCSGC	1 cut(s)	539
TfiI	GAWTC	3 cut(s)	101, 1069, 1253
Tru1I	TTAA	4 cut(s)	216, 635, 674, 1271
Tru9I	TTAA	4 cut(s)	216, 635, 674, 1271
TscAI	CASTG	4 cut(s)	133, 649, 787, 892
TseFI	GTSAC	1 cut(s)	59
TseI	GCWGC	7 cut(s)	9, 188, 266, 287, 1124, 1277, 1535
Tsp45I	GTSAC	1 cut(s)	59
TspDTI	ATGAA	4 cut(s)	602, 1595, 1862, 1878
TspGWI	ACGGA	2 cut(s)	111, 1233
TspRI	CASTG	4 cut(s)	133, 649, 787, 892
Tth111I	GACNNNGTC	1 cut(s)	338
Van91I	CCANNNNNTGG	1 cut(s)	1449
VneI	GTGCAC	1 cut(s)	1181
VpaK11BI	GGWCC	4 cut(s)	651, 1037, 1048, 1819
XapI	RAATTY	3 cut(s)	1200, 1330, 1468
XceI	RCATGY	3 cut(s)	331, 557, 1745
XcmI	CCANNNNNNNNNTGG	2 cut(s)	779, 1450
XmiI	GTMKAC	1 cut(s)	1896
XspI	CTAG	2 cut(s)	981, 1826
Zsp2I	ATGCAT	1 cut(s)	1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.