Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0013098

Physical Location & Seq

Genomic Coordinates Forward (+)

7141026 .. 7144412

Gene Structure 3387 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1102200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGACTCCTTCCTACTGCTTATCTTCTGCAAGAACCACCTCCACACCAAAAGCATTCCTCCACAATTCCCACCTCTACCTCCCAAAGCACCGCTCCATTTTCCTCCCAACAGAACCCCACTTTCCCAAGAAAGTCACAAACTCTCTCAGCTCCCAAACACCATTACCCAAGTCTTTTCTCCCCACTTTGAGGCTCAACACCTCCAAACTCACACACCCTTTTGCTAGTTTATCCTCTTTCGCCGATGCCGAAGGTGAAAACGAAGAACAAAACCAAGATGTCAAAGCCGCACAACATCACGAAATAGCAGAAACAGGGGAACGAACCAAGTCGCCGGGAATGGCCCAGGCCTTCCACATATCTTCCAGCACCGCCTCCGCCATTTCCATCTGCATAGCGTTTGCGGCTCTGAGCCTTCCGTTTTTCATGAAGTCTCTGGGGCAAGGCCTGGCCGTTAAGACCAAGATGCTGTCTTATGTTACTCTGCTTTTCGGGTTTTACATGGCGTGGAACATCGGAGCCAACGACGTGGCCAATGCCATGGGGACTTCGGTGGGCTCGGGAGCGCTGTCGCTGCGGCAGGCAGTGCTGACGGCGGCGGTTTTGGAATTCTCAGGGGCGTTTCTAATGGGGACTCACGTGACGAGCACAATGCAAAAGGGGATCCTTGTTGCTAATGTGTTTCAGGGGAAGGATACTCTGCTTTTTGCTGGGTTGCTAGCTTCTCTTGCTGCTGCTGGTACTTGGTTGCAGGTTGCATCATATTATGGCTGGCCGGTCTCGACAACGCACTGTATAGTTGGATCCATGGTCGGATTCGGGCTTGTCTATGGCGGTCCAGATGCTGTCTTCTGGAGTTCGTTGGCGAGGGTGACTTCGTCGTGGGTGATCTCTCCGTTCATGGGAGCACTGGTGTCTTTTCTTGTGTACAAATGCATTCGTAGGTATGTGTACAGCGCTCCAAATCCTGGACAAGCCGCAGCTGCAGCAGCACCAATTGCTGTACTAGTCGGTGTAACCGGAATCTCATTCGCAGTCTTTCCTCTCGGGAAAAGCTTGCCTTTGGCTCTGGCCAAGGCTCTAGCCTGTGGAGTTGCAGGTGCAGTCCTCGTGTACAGAATTATCCACAGGCAGCTAGGTCATCTCCTCGTCAAGGCCATGTCATCGGAAGCAGAGCAAACGGAGGGTACCATCCAGCAAAAAAACATCGGATTTCTCACTGATATTTCAGGTCCAACCGGTACACAGTTGGAAATAGTATATGGGGTTTTCGGATACATGCAAGTCCTCTCAGCATGCTTCATGTCATTTGCTCACGGCGGGAATGATGTCTCCAACGCAATAGGTCCTTTGGCTGGTGCATTATCTATTCTTCATGGCGGCACTAGTGGAGCGGAGATTGTTATTCCAACTGATGTTCTAGCATGGGGAGGGTTTGGAATTGTAGCAGGTATCACAATGTGGGGGTATAGGGTGATAGCAACCATTGGGAAGAAGATTACAGAACTGACACCTACAAGAGGATTTGCGGCTGAGTTTGCAGGAGCCTCGGTGGTTCTGTTTGCATCAAAGCTGGGACTGCCCATCTCCGCCACACATACTCTGGTGGGTGCAGTCATGGGGGTGGGATTTGCAAGGGGGCTCAATAGTGTTAGAGCAGAAACTGTGAGGGAAATTGTGACTTCTTGGGTTGTGACAATTCCTGCTGGTGCTTTCTTTTCGGTTTTATACACATGGATCTTTACCAAGCTTTTATCTTATATTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005315 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0008509 GO:0009507 GO:0009526 GO:0009536 GO:0009673 GO:0009941 GO:0015075 GO:0015103 GO:0015114 GO:0015291 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0031967 GO:0031975 GO:0034220 GO:0035435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0098656 GO:0098660 GO:0098661

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHO4

Protein Analysis

590

Amino Acids

62.06

Weight (kDa)

9.28

Isoelectric Point (pI)

26.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHO4	PF01384	172 - 574	1.2e-107	Phosphate transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26570 AT3G26570
fragaria_vesca	FvH4_4g25560
malus_domestica	MD13G1101400.v1.1 MD16G1102200.v1.1
prunus_persica	Prupe.1G244400_v2.0.a1
pyrus_communis	pycom13g08850 pycom16g08650
rosa_chinensis	RchiOBHm_Chr4g0432971
rosa_laevigata	RLG00000006796
rosa_multiflora	Rmu_sc0001762.1_g000044
rosa_roxburghii	Rroxscaffold_5G00374350
rosa_rugosa	Rorug04G0264500
rosa_samantha	Rh4AG318400 Rh4BG326500 Rh4CG341800 Rh4DG321700
rosa_wichuraiana	Rw4G027680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1088
Acc36I	ACCTGC	3 cut(s)	742, 1088, 1439
Acc65I	GGTACC	1 cut(s)	1187
AccB1I	GGYRCC	1 cut(s)	1187
AccB7I	CCANNNNNTGG	1 cut(s)	968
AccBSI	CCGCTC	2 cut(s)	93, 1394
AclWI	GGATC	5 cut(s)	658, 671, 798, 811, 1745
AcoI	YGGCCR	4 cut(s)	450, 531, 773, 1071
AcsI	RAATTY	1 cut(s)	608
AcvI	CACGTG	1 cut(s)	640
AdeI	CACNNNGTG	1 cut(s)	1461
AfaI	GTAC	7 cut(s)	742, 929, 953, 1005, 1115, 1189, 1243
AfeI	AGCGCT	2 cut(s)	567, 958
AfiI	CCNNNNNNNGG	6 cut(s)	189, 902, 968, 1153, 1355, 1520
AgeI	ACCGGT	1 cut(s)	1238
AhlI	ACTAGT	2 cut(s)	1006, 1385
AjiI	CACGTC	1 cut(s)	529
AjnI	CCWGG	3 cut(s)	345, 447, 967
AluBI	AGCT	7 cut(s)	150, 722, 983, 1056, 1135, 1573, 1750
AluI	AGCT	7 cut(s)	150, 722, 983, 1056, 1135, 1573, 1750
Alw21I	GWGCWC	2 cut(s)	650, 910
Alw26I	GTCTC	3 cut(s)	438, 784, 1336
AlwI	GGATC	5 cut(s)	658, 671, 798, 811, 1745
AlwNI	CAGNNNCTG	2 cut(s)	845, 1664
Ama87I	CYCGRG	2 cut(s)	559, 1046
Aor51HI	AGCGCT	2 cut(s)	567, 958
AoxI	GGCC	8 cut(s)	342, 348, 445, 450, 531, 773, 1071, 1155
ApeKI	GCWGC	8 cut(s)	574, 731, 734, 980, 983, 986, 989, 1132
ApoI	RAATTY	1 cut(s)	608
AsiGI	ACCGGT	1 cut(s)	1238
Asp718I	GGTACC	1 cut(s)	1187
AspLEI	GCGC	2 cut(s)	568, 959
AspS9I	GGNCC	4 cut(s)	343, 836, 1232, 1346
AsuC2I	CCSGG	1 cut(s)	336
AsuHPI	GGTGA	4 cut(s)	266, 883, 898, 1486
AsuNHI	GCTAGC	1 cut(s)	718
AvaI	CYCGRG	2 cut(s)	559, 1046
AvaII	GGWCC	3 cut(s)	836, 1232, 1346
BalI	TGGCCA	2 cut(s)	533, 1073
BamHI	GGATCC	2 cut(s)	663, 803
BanI	GGYRCC	1 cut(s)	1187
BanII	GRGCYC	2 cut(s)	560, 1644
BauI	CACGAG	1 cut(s)	1109
BbrPI	CACGTG	1 cut(s)	640
BbsI	GAAGAC	1 cut(s)	841
Bbv12I	GWGCWC	2 cut(s)	650, 910
BbvI	GCAGC	8 cut(s)	561, 718, 721, 970, 992, 998, 1001, 1144
BccI	CCATC	3 cut(s)	395, 1199, 1592
BceAI	ACGGC	3 cut(s)	437, 609, 1333
BcgI	CGANNNNNNTGC	4 cut(s)	634, 668, 1530, 1564
BciT130I	CCWGG	3 cut(s)	347, 449, 969
BciVI	GTATCC	2 cut(s)	688, 1268
BcnI	CCSGG	1 cut(s)	336
BcoDI	GTCTC	3 cut(s)	438, 784, 1336
BcuI	ACTAGT	2 cut(s)	1006, 1385
BfaI	CTAG	7 cut(s)	225, 719, 1007, 1082, 1136, 1386, 1421
BfmI	CTRYAG	1 cut(s)	984
BfoI	RGCGCY	2 cut(s)	569, 960
BfuAI	ACCTGC	3 cut(s)	742, 1088, 1439
BfuI	GTATCC	2 cut(s)	688, 1268
Bme1390I	CCNGG	4 cut(s)	336, 347, 449, 969
Bme18I	GGWCC	3 cut(s)	836, 1232, 1346
BmeT110I	CYCGRG	2 cut(s)	559, 1046
BmgBI	CACGTC	1 cut(s)	529
BmgT120I	GGNCC	4 cut(s)	343, 836, 1232, 1346
BmiI	GGNNCC	5 cut(s)	520, 665, 805, 1189, 1546
BmrFI	CCNGG	4 cut(s)	336, 347, 449, 969
BmsI	GCATC	5 cut(s)	235, 456, 767, 832, 1574
BmtI	GCTAGC	1 cut(s)	722
BpiI	GAAGAC	1 cut(s)	841
BpmI	CTGGAG	1 cut(s)	874
BpuMI	CCSGG	1 cut(s)	336
BsaAI	YACGTR	1 cut(s)	640
BsaI	GGTCTC	1 cut(s)	784
BsaJI	CCNNGG	5 cut(s)	345, 540, 807, 1074, 1548
BsaWI	WCCGGW	2 cut(s)	1019, 1238
BsaXI	ACNNNNNCTCC	4 cut(s)	897, 927, 1536, 1566
Bsc4I	CCNNNNNNNGG	6 cut(s)	189, 902, 968, 1153, 1355, 1520
Bse118I	RCCGGY	2 cut(s)	775, 1238
Bse1I	ACTGG	1 cut(s)	915
BseBI	CCWGG	3 cut(s)	347, 449, 969
BseDI	CCNNGG	5 cut(s)	345, 540, 807, 1074, 1548
BseGI	GGATG	1 cut(s)	1191
BseLI	CCNNNNNNNGG	6 cut(s)	189, 902, 968, 1153, 1355, 1520
BseMII	CTCAG	5 cut(s)	160, 401, 627, 1305, 1524
BseNI	ACTGG	1 cut(s)	915
BseRI	GAGGAG	1 cut(s)	1136
BseXI	GCAGC	8 cut(s)	561, 718, 721, 970, 992, 998, 1001, 1144
BseYI	CCCAGC	2 cut(s)	710, 1573
BsgI	GTGCAG	2 cut(s)	1122, 1632
BshFI	GGCC	8 cut(s)	344, 350, 447, 452, 533, 775, 1073, 1157
BshNI	GGYRCC	1 cut(s)	1187
BshTI	ACCGGT	1 cut(s)	1238
BsiHKAI	GWGCWC	2 cut(s)	650, 910
BsiHKCI	CYCGRG	2 cut(s)	559, 1046
BsiSI	CCGG	4 cut(s)	335, 776, 1020, 1239
BslFI	GGGAC	3 cut(s)	559, 646, 1590
BslI	CCNNNNNNNGG	6 cut(s)	189, 902, 968, 1153, 1355, 1520
BsmAI	GTCTC	3 cut(s)	438, 784, 1336
BsmFI	GGGAC	3 cut(s)	559, 646, 1590
BsmI	GAATGC	2 cut(s)	53, 936
BsnI	GGCC	8 cut(s)	344, 350, 447, 452, 533, 775, 1073, 1157
Bso31I	GGTCTC	1 cut(s)	784
BsoBI	CYCGRG	2 cut(s)	559, 1046
Bsp1286I	GDGCHC	4 cut(s)	560, 650, 910, 1644
Bsp1407I	TGTACA	3 cut(s)	927, 951, 1113
Bsp143I	GATC	4 cut(s)	663, 803, 888, 1737
Bsp19I	CCATGG	2 cut(s)	540, 807
BspANI	GGCC	8 cut(s)	344, 350, 447, 452, 533, 775, 1073, 1157
BspCNI	CTCAG	5 cut(s)	159, 402, 626, 1304, 1525
BspHI	TCATGA	1 cut(s)	426
BspLI	GGNNCC	5 cut(s)	520, 665, 805, 1189, 1546
BspMAI	CTGCAG	1 cut(s)	988
BspMI	ACCTGC	3 cut(s)	742, 1088, 1439
BspOI	GCTAGC	1 cut(s)	722
BspPI	GGATC	5 cut(s)	658, 671, 798, 811, 1745
BspT107I	GGYRCC	1 cut(s)	1187
BspTNI	GGTCTC	1 cut(s)	784
BsrBI	CCGCTC	2 cut(s)	93, 1394
BsrFI	RCCGGY	2 cut(s)	775, 1238
BsrGI	TGTACA	3 cut(s)	927, 951, 1113
BsrI	ACTGG	1 cut(s)	915
BssAI	RCCGGY	2 cut(s)	775, 1238
BssECI	CCNNGG	5 cut(s)	345, 540, 807, 1074, 1548
BssMI	GATC	4 cut(s)	663, 803, 888, 1737
BssSI	CACGAG	1 cut(s)	1109
BssT1I	CCWWGG	3 cut(s)	540, 807, 1074
Bst2BI	CACGAG	1 cut(s)	1109
Bst2UI	CCWGG	3 cut(s)	347, 449, 969
Bst4CI	ACNGT	3 cut(s)	794, 1248, 1666
BstAPI	GCANNNNNTGC	2 cut(s)	586, 998
BstAUI	TGTACA	3 cut(s)	927, 951, 1113
BstBAI	YACGTR	1 cut(s)	640
BstC8I	GCNNGC	5 cut(s)	582, 720, 773, 1058, 1297
BstDEI	CTNAG	5 cut(s)	146, 410, 613, 1291, 1533
BstDSI	CCRYGG	2 cut(s)	540, 807
BstENI	CCTNNNNNAGG	2 cut(s)	1151, 1518
BstF5I	GGATG	1 cut(s)	1191
BstH2I	RGCGCY	2 cut(s)	569, 960
BstHHI	GCGC	2 cut(s)	568, 959
BstKTI	GATC	4 cut(s)	666, 806, 891, 1740
BstMAI	GTCTC	3 cut(s)	438, 784, 1336
BstMBI	GATC	4 cut(s)	663, 803, 888, 1737
BstNI	CCWGG	3 cut(s)	347, 449, 969
BstNSI	RCATGY	2 cut(s)	1282, 1299
BstSCI	CCNGG	4 cut(s)	334, 345, 447, 967
BstSFI	CTRYAG	1 cut(s)	984
BstV1I	GCAGC	8 cut(s)	561, 718, 721, 970, 992, 998, 1001, 1144
BstV2I	GAAGAC	1 cut(s)	841
BstX2I	RGATCY	3 cut(s)	663, 803, 1737
BstXI	CCANNNNNNTGG	2 cut(s)	529, 541
BstYI	RGATCY	3 cut(s)	663, 803, 1737
BsuI	GTATCC	2 cut(s)	688, 1268
BsuRI	GGCC	8 cut(s)	344, 350, 447, 452, 533, 775, 1073, 1157
BtgI	CCRYGG	2 cut(s)	540, 807
BtrI	CACGTC	1 cut(s)	529
BtsCI	GGATG	1 cut(s)	1191
BtsI	GCAGTG	1 cut(s)	591
BtsIMutI	CAGTG	4 cut(s)	591, 790, 908, 1218
BveI	ACCTGC	3 cut(s)	742, 1088, 1439
Cac8I	GCNNGC	5 cut(s)	582, 720, 773, 1058, 1297
CaiI	CAGNNNCTG	2 cut(s)	845, 1664
CciI	TCATGA	1 cut(s)	426
CfoI	GCGC	2 cut(s)	568, 959
Cfr10I	RCCGGY	2 cut(s)	775, 1238
Cfr13I	GGNCC	4 cut(s)	343, 836, 1232, 1346
Csp6I	GTAC	7 cut(s)	741, 928, 952, 1004, 1114, 1188, 1242
CspAI	ACCGGT	1 cut(s)	1238
CviQI	GTAC	7 cut(s)	741, 928, 952, 1004, 1114, 1188, 1242
DdeI	CTNAG	5 cut(s)	146, 410, 613, 1291, 1533
DpnI	GATC	4 cut(s)	665, 805, 890, 1739
DpnII	GATC	4 cut(s)	663, 803, 888, 1737
DraIII	CACNNNGTG	1 cut(s)	1461
EaeI	YGGCCR	4 cut(s)	450, 531, 773, 1071
EciI	GGCGGA	2 cut(s)	367, 1579
Eco130I	CCWWGG	3 cut(s)	540, 807, 1074
Eco147I	AGGCCT	2 cut(s)	350, 447
Eco24I	GRGCYC	2 cut(s)	560, 1644
Eco31I	GGTCTC	1 cut(s)	784
Eco47I	GGWCC	3 cut(s)	836, 1232, 1346
Eco47III	AGCGCT	2 cut(s)	567, 958
Eco72I	CACGTG	1 cut(s)	640
Eco88I	CYCGRG	2 cut(s)	559, 1046
EcoNI	CCTNNNNNAGG	2 cut(s)	1151, 1518
EcoO109I	RGGNCCY	1 cut(s)	1346
EcoRI	GAATTC	1 cut(s)	608
EcoRII	CCWGG	3 cut(s)	345, 447, 967
EcoT14I	CCWWGG	3 cut(s)	540, 807, 1074
EcoT22I	ATGCAT	1 cut(s)	938
EcoT38I	GRGCYC	2 cut(s)	560, 1644
ErhI	CCWWGG	3 cut(s)	540, 807, 1074
FalI	AAGNNNNNCTT	2 cut(s)	1045, 1077
FaqI	GGGAC	3 cut(s)	559, 646, 1590
FauI	CCCGC	1 cut(s)	1313
FokI	GGATG	1 cut(s)	1178
FriOI	GRGCYC	2 cut(s)	560, 1644
FspBI	CTAG	7 cut(s)	225, 719, 1007, 1082, 1136, 1386, 1421
GlaI	GCGC	2 cut(s)	567, 958
GsaI	CCCAGC	2 cut(s)	714, 1577
GsuI	CTGGAG	1 cut(s)	874
HaeII	RGCGCY	2 cut(s)	569, 960
HaeIII	GGCC	8 cut(s)	344, 350, 447, 452, 533, 775, 1073, 1157
HapII	CCGG	4 cut(s)	335, 776, 1020, 1239
HhaI	GCGC	2 cut(s)	568, 959
Hin6I	GCGC	2 cut(s)	566, 957
HinP1I	GCGC	2 cut(s)	566, 957
HindIII	AAGCTT	2 cut(s)	1054, 1748
HinfI	GANTC	4 cut(s)	4, 634, 816, 1023
HpaII	CCGG	4 cut(s)	335, 776, 1020, 1239
HphI	GGTGA	4 cut(s)	266, 883, 898, 1486
Hpy166II	GTNNAC	4 cut(s)	928, 952, 1114, 1244
Hpy188I	TCNGA	6 cut(s)	411, 518, 815, 1168, 1211, 1274
Hpy188III	TCNNGA	7 cut(s)	299, 427, 561, 781, 839, 853, 1048
Hpy8I	GTNNAC	4 cut(s)	928, 952, 1114, 1244
Hpy99I	CGWCG	2 cut(s)	530, 883
HpyAV	CCTTC	5 cut(s)	18, 245, 361, 425, 685
HpyCH4III	ACNGT	3 cut(s)	794, 1248, 1666
HpyCH4IV	ACGT	2 cut(s)	528, 639
HpyF3I	CTNAG	5 cut(s)	146, 410, 613, 1291, 1533
HpySE526I	ACGT	2 cut(s)	528, 639
HspAI	GCGC	2 cut(s)	566, 957
KpnI	GGTACC	1 cut(s)	1191
Kzo9I	GATC	4 cut(s)	663, 803, 888, 1737
LmnI	GCTCC	8 cut(s)	98, 155, 518, 563, 905, 964, 1391, 1544
Lsp1109I	GCAGC	8 cut(s)	561, 718, 721, 970, 992, 998, 1001, 1144
LweI	GCATC	5 cut(s)	235, 456, 767, 832, 1574
MaeI	CTAG	7 cut(s)	225, 719, 1007, 1082, 1136, 1386, 1421
MaeII	ACGT	2 cut(s)	528, 639
MaeIII	GTNAC	7 cut(s)	133, 478, 640, 871, 1015, 1678, 1693
MalI	GATC	4 cut(s)	665, 805, 890, 1739
MbiI	CCGCTC	2 cut(s)	93, 1394
MboI	GATC	4 cut(s)	663, 803, 888, 1737
MboII	GAAGA	7 cut(s)	15, 275, 354, 841, 1364, 1504, 1507
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	3 cut(s)	663, 803, 1737
MhlI	GDGCHC	4 cut(s)	560, 650, 910, 1644
MlsI	TGGCCA	2 cut(s)	533, 1073
MluCI	AATT	7 cut(s)	64, 608, 996, 1119, 1440, 1674, 1698
MluNI	TGGCCA	2 cut(s)	533, 1073
MlyI	GAGTC	1 cut(s)	628
MmeI	TCCRAC	6 cut(s)	781, 793, 1230, 1259, 1359, 1433
Mox20I	TGGCCA	2 cut(s)	533, 1073
Mph1103I	ATGCAT	1 cut(s)	938
MscI	TGGCCA	2 cut(s)	533, 1073
MseI	TTAA	1 cut(s)	456
MslI	CAYNNNNRTG	1 cut(s)	1622
Msp20I	TGGCCA	2 cut(s)	533, 1073
MspA1I	CMGCKG	1 cut(s)	983
MspI	CCGG	4 cut(s)	335, 776, 1020, 1239
MspR9I	CCNGG	4 cut(s)	336, 347, 449, 969
MunI	CAATTG	1 cut(s)	996
Mva1269I	GAATGC	2 cut(s)	53, 936
MvaI	CCWGG	3 cut(s)	347, 449, 969
NciI	CCSGG	1 cut(s)	336
NcoI	CCATGG	2 cut(s)	540, 807
NdeII	GATC	4 cut(s)	663, 803, 888, 1737
NheI	GCTAGC	1 cut(s)	718
NlaIV	GGNNCC	5 cut(s)	520, 665, 805, 1189, 1546
NmuCI	GTSAC	5 cut(s)	133, 640, 871, 1678, 1693
NsiI	ATGCAT	1 cut(s)	938
NspI	RCATGY	2 cut(s)	1282, 1299
PaeI	GCATGC	1 cut(s)	1299
PagI	TCATGA	1 cut(s)	426
PaqCI	CACCTGC	1 cut(s)	1088
PceI	AGGCCT	2 cut(s)	350, 447
PcsI	WCGNNNNNNNCGW	2 cut(s)	246, 522
PctI	GAATGC	2 cut(s)	53, 936
PfeI	GAWTC	2 cut(s)	816, 1023
PflFI	GACNNNGTC	1 cut(s)	877
PflMI	CCANNNNNTGG	1 cut(s)	968
PfoI	TCCNGGA	1 cut(s)	967
PinAI	ACCGGT	1 cut(s)	1238
PleI	GAGTC	1 cut(s)	628
PmaCI	CACGTG	1 cut(s)	640
PmlI	CACGTG	1 cut(s)	640
PpsI	GAGTC	1 cut(s)	628
Ppu21I	YACGTR	1 cut(s)	640
PpuMI	RGGWCCY	1 cut(s)	1346
Psp5II	RGGWCCY	1 cut(s)	1346
Psp6I	CCWGG	3 cut(s)	345, 447, 967
PspCI	CACGTG	1 cut(s)	640
PspFI	CCCAGC	2 cut(s)	710, 1573
PspGI	CCWGG	3 cut(s)	345, 447, 967
PspN4I	GGNNCC	5 cut(s)	520, 665, 805, 1189, 1546
PspPI	GGNCC	4 cut(s)	343, 836, 1232, 1346
PspPPI	RGGWCCY	1 cut(s)	1346
PstI	CTGCAG	1 cut(s)	988
PstNI	CAGNNNCTG	2 cut(s)	845, 1664
PsuI	RGATCY	3 cut(s)	663, 803, 1737
PsyI	GACNNNGTC	1 cut(s)	877
PvuII	CAGCTG	1 cut(s)	983
RsaI	GTAC	7 cut(s)	742, 929, 953, 1005, 1115, 1189, 1243
RsaNI	GTAC	7 cut(s)	741, 928, 952, 1004, 1114, 1188, 1242
RseI	CAYNNNNRTG	1 cut(s)	1622
SaqAI	TTAA	1 cut(s)	456
Sau3AI	GATC	4 cut(s)	663, 803, 888, 1737
Sau96I	GGNCC	4 cut(s)	343, 836, 1232, 1346
SchI	GAGTC	1 cut(s)	628
ScrFI	CCNGG	4 cut(s)	336, 347, 449, 969
SduI	GDGCHC	4 cut(s)	560, 650, 910, 1644
SfaNI	GCATC	5 cut(s)	235, 456, 767, 832, 1574
SfcI	CTRYAG	1 cut(s)	984
SinI	GGWCC	3 cut(s)	836, 1232, 1346
SmiMI	CAYNNNNRTG	1 cut(s)	1622
SpeI	ACTAGT	2 cut(s)	1006, 1385
SphI	GCATGC	1 cut(s)	1299
Sse9I	AATT	7 cut(s)	64, 608, 996, 1119, 1440, 1674, 1698
SseBI	AGGCCT	2 cut(s)	350, 447
SspMI	CTAG	7 cut(s)	225, 719, 1007, 1082, 1136, 1386, 1421
StuI	AGGCCT	2 cut(s)	350, 447
StyD4I	CCNGG	4 cut(s)	334, 345, 447, 967
StyI	CCWWGG	3 cut(s)	540, 807, 1074
TaaI	ACNGT	3 cut(s)	794, 1248, 1666
TaiI	ACGT	2 cut(s)	531, 642
TaqI	TCGA	1 cut(s)	782
TasI	AATT	7 cut(s)	64, 608, 996, 1119, 1440, 1674, 1698
TatI	WGTACW	4 cut(s)	927, 951, 1003, 1113
TauI	GCSGC	7 cut(s)	290, 407, 580, 599, 980, 1383, 1532
TfiI	GAWTC	2 cut(s)	816, 1023
Tru1I	TTAA	1 cut(s)	456
Tru9I	TTAA	1 cut(s)	456
TscAI	CASTG	4 cut(s)	591, 797, 915, 1225
TseFI	GTSAC	5 cut(s)	133, 640, 871, 1678, 1693
TseI	GCWGC	8 cut(s)	574, 731, 734, 980, 983, 986, 989, 1132
Tsp45I	GTSAC	5 cut(s)	133, 640, 871, 1678, 1693
TspDTI	ATGAA	5 cut(s)	415, 443, 889, 1291, 1364
TspGWI	ACGGA	3 cut(s)	408, 885, 1196
TspRI	CASTG	4 cut(s)	591, 797, 915, 1225
Tth111I	GACNNNGTC	1 cut(s)	877
Van91I	CCANNNNNTGG	1 cut(s)	968
VpaK11BI	GGWCC	3 cut(s)	836, 1232, 1346
XagI	CCTNNNNNAGG	2 cut(s)	1151, 1518
XapI	RAATTY	1 cut(s)	608
XceI	RCATGY	2 cut(s)	1282, 1299
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1600
XspI	CTAG	7 cut(s)	225, 719, 1007, 1082, 1136, 1386, 1421
Zsp2I	ATGCAT	1 cut(s)	938

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.