MD17G1101500.v1.1

Cytosolic domain of 10TM putative phosphate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0007600
Physical Location & Seq
Reverse (-)
8619744 .. 8626669
6926 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1101500.v1.1.491

Sequence Viewer

Length: 2304 bp
ATGGCGACACTAAATGATATCGCAGTTGCAGCAGCTATCAATATTCTCACTGCATTTGCTTTCTTTTTGGCGTTTGCCATACTTCGGATTCAACCCGTCAATGATAGGGTCTACTTTCCAAAATGGTATCTTAAAGGGTTACGGTGTAGTCCGTTTGGTGGAGTAAGCAAGTTTGTGAATCTGGACTTCAGGTTGTATGCGAAATTCTTGAATTGGATGCCTGCTGCATTACAAATGCCAGAACCTGAGCTAGTTGACCATGCAGGGTTGGACTCTGCGGTTTACTTGAGGATCTACTTGACAGGGCTAAAAATTTTTGTTCCCATCGCATTCCTAGCCTATGCAGTCATGGTTCCAGTCAATTGGACTAATAGCACCCTAAAGAATTCAACTGTAGTATACAGCAACATAGATGAGCTCTCTATCTCAAATGTTCCTCTTGGATCGCATAGATTTTGGACTCATTTAGTAATGGCCTATGCTTTTACAACTTGGACATGCTACATATTGAAAACAGAGTACGAGAAGATTGCAACAATGAGGTTGCATTTTCTTGCATCAGAACGGCGGCGCCCTGATCAGTTCACAGTACTGGTTAGAAATGTGCCACCAGATCCTGATGAAACAGTTAGTCAGCTCGTGGAACATTTTTTTCTGGTCAACCATCCAGACCACTATCTCACTCATCAGGTTGTTTACAATGCAAATAAACTTTCTGAATTAGTCAATGAGAAGAAGAAAATTCAGAATTGGCTTGACTACTATCAACTTAAATTTTCTAGAAATTCATCTAAAAGGCCATCTAAGAGGACTGGATTTCTTGGTCTTTGGGGTAAATGGGTGGATGCAGTTGATTTTTATACATCTGAGATTGAGAGGCTATCAAAAGAAATATCCTTGGAGAGAGATAAGATTACAAGTAGCCCTAAATCTATCATGCCAGCAGCTTTTGTTTCCTTCAGAACTCGATGGGGTGCCGCTGTTTGTGCACAAGCTCAACAATCCAGAAACCCAACTATATGGTTGACTGAGTGGGCTCCAGAACCCCGTGATGTTTATTGGGATAACTTGGCTATCCCATATGTTACATTGACAATTAGGAGGCTTGTAGTTGCTGTTGCTTTCTTCTTCCTCACCTTCTTTTTTATGATCCCCATTGCATTTGTACAGTCCCTTGCAAACATTGAGGGTATTGAGAAAGCAGTCCCCTTCCTAAAGCCCATTATTGAAGTGAAATTCATAAAATCATTTATCCAAGGTTTCCTGCCTGGAATTGCTTTGAAGATTTTTCTTATATTCCTTCCCTCTATATTGATGGTAATGTCCAAATTTGAAGGTTTCGGTAGCATATCAGCTCTAGAGAGGAGATCGGCTAGTAGATATTATATTTTCCAATTTGTCAATGTATTTCTTGGGAGCATAATCACTGGAACTGCATTTCAACAACTAGATGAGTTCATCCACCAATCTGCCAATGAGATCCCGAAGACAATTGGTGTTTCAATTCCAATGAAGGCAACCTTCTTTATCACTTATATAATGGTTGATGGGTGGGCCGGAATTGCTGGTGAGATTCTAAGGTTGAAACCCTTGATTATATATCACTTGAAAAATTTCTTCTTGGTGAAGACTGAAAAGGATAGGGAAGAAGCCATGGATCCCGGAACCCTTGGTTTCAACACCGGTGAACCTCAAATACAACTATATTTCTTACTTGGCCTTGTTTATGCTGTGGTGTCACCAATCCTACTTCCCTTCATAATAGTATTCTTTGCCCTGGCATATGTTGTTTATCGTCATCAGATTATAAACGTCTATAATCAAGAGTATGAAAGTGCTGCGGCATTCTGGCCTGATGTCCATGGGCGCATCATAACGGCACTAATTGTCTCACAACTGCTGCTGATGGGATTGTTAAGCACAAAAGAAGCTGCTCAGTCAACTCCACTGCTCATTACACTCCCAGTGTTGACCATATGGTTCCATAAATTCTGCAAAGGCCGTTACGAACCTGCTTTCATCAGACATCCCTTGCAGGAAGCAATGATGAAAGATACATTAGAACGCACAAGAGAGCCGAATCTGAACATGAAAGGCTTCCTTCAAAATGCGTACATCCACCCAGTTTTCAAGGGTGAAGATGACAGCGAGAACGATGCACCTGCCCAGGAATTTGAGAAGGAGCCCCCAGTTGTCCTAACAAAACGCAGTTCTCGAAGGAATACACCAATGCCCAGCAAATATAGCGGTTCTTCTTCATCAGCATCCATACCCGAGGACGATACTCAGAAGATGATCCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

768

Amino Acids

87.73

Weight (kDa)

8.97

Isoelectric Point (pI)

45.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 7 - 171 7.5e-41 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 194 - 356 3.7e-48 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 367 - 639 8.3e-88 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1808
AarI CACCTGC 1 cut(s) 2170
Acc36I ACCTGC 2 cut(s) 2020, 2170
AccB1I GGYRCC 2 cut(s) 570, 974
AccI GTMKAC 2 cut(s) 111, 399
AciI CCGC 5 cut(s) 278, 568, 978, 1841, 2247
AclWI GGATC 8 cut(s) 299, 451, 608, 1144, 1474, 1652, 1665, 2290
AcuI CTGAAG 2 cut(s) 172, 943
AcyI GRCGYC 1 cut(s) 571
AfaI GTAC 4 cut(s) 521, 591, 1167, 2114
AfiI CCNNNNNNNGG 2 cut(s) 84, 158
AgeI ACCGGT 1 cut(s) 1682
AjnI CCWGG 3 cut(s) 1267, 1776, 2166
AluBI AGCT 8 cut(s) 35, 250, 418, 637, 947, 995, 1355, 1931
AluI AGCT 8 cut(s) 35, 250, 418, 637, 947, 995, 1355, 1931
Alw21I GWGCWC 2 cut(s) 420, 991
Alw26I GTCTC 1 cut(s) 1894
Alw44I GTGCAC 1 cut(s) 987
AlwI GGATC 8 cut(s) 299, 451, 608, 1144, 1474, 1652, 1665, 2290
AlwNI CAGNNNCTG 2 cut(s) 245, 617
Ama87I CYCGRG 1 cut(s) 2273
AoxI GGCC 6 cut(s) 474, 797, 1554, 1717, 1850, 1999
ApaLI GTGCAC 1 cut(s) 987
ApeKI GCWGC 7 cut(s) 29, 32, 224, 944, 1838, 1900, 1931
AsiGI ACCGGT 1 cut(s) 1682
Asp700I GAANNNNTTC 2 cut(s) 1613, 2096
AspLEI GCGC 2 cut(s) 573, 1869
AspS9I GGNCC 1 cut(s) 1554
AsuC2I CCSGG 1 cut(s) 1662
AsuHPI GGTGA 6 cut(s) 1126, 1580, 1636, 1697, 1731, 2147
AvaI CYCGRG 1 cut(s) 2273
BaeGI GKGCMC 1 cut(s) 991
BamHI GGATCC 1 cut(s) 1657
BanI GGYRCC 2 cut(s) 570, 974
BanII GRGCYC 3 cut(s) 420, 1039, 2187
BauI CACGAG 1 cut(s) 638
BbsI GAAGAC 2 cut(s) 1493, 1634
Bbv12I GWGCWC 2 cut(s) 420, 991
BbvI GCAGC 7 cut(s) 41, 44, 211, 956, 1825, 1887, 1918
BccI CCATC 7 cut(s) 332, 672, 808, 963, 1309, 1541, 1900
BceAI ACGGC 3 cut(s) 581, 1893, 1986
BcgI CGANNNNNNTGC 6 cut(s) 512, 546, 2138, 2144, 2172, 2178
BciT130I CCWGG 3 cut(s) 1269, 1778, 2168
BclI TGATCA 1 cut(s) 577
BcnI CCSGG 1 cut(s) 1662
BcoDI GTCTC 1 cut(s) 1894
BfaI CTAG 6 cut(s) 251, 335, 780, 1358, 1374, 1448
BfmI CTRYAG 1 cut(s) 393
BfoI RGCGCY 1 cut(s) 574
BfuAI ACCTGC 2 cut(s) 2020, 2170
BmcAI AGTACT 1 cut(s) 591
Bme1390I CCNGG 4 cut(s) 1269, 1662, 1778, 2168
BmeT110I CYCGRG 1 cut(s) 2273
BmgT120I GGNCC 1 cut(s) 1554
BmiI GGNNCC 8 cut(s) 354, 572, 976, 1038, 1659, 1666, 1982, 2184
BmrFI CCNGG 4 cut(s) 1269, 1662, 1778, 2168
BmrI ACTGGG 3 cut(s) 1958, 2117, 2183
BmsI GCATC 6 cut(s) 207, 566, 835, 1878, 2146, 2273
BmuI ACTGGG 3 cut(s) 1958, 2117, 2183
BpiI GAAGAC 2 cut(s) 1493, 1634
BpmI CTGGAG 1 cut(s) 1023
Bpu10I CCTNAGC 1 cut(s) 246
BpuEI CTTGAG 1 cut(s) 307
BpuMI CCSGG 1 cut(s) 1662
BsaHI GRCGYC 1 cut(s) 571
BsaJI CCNNGG 8 cut(s) 897, 1255, 1653, 1669, 1776, 1861, 2166, 2274
BsaWI WCCGGW 1 cut(s) 1682
Bsc4I CCNNNNNNNGG 2 cut(s) 84, 158
Bse118I RCCGGY 1 cut(s) 1682
Bse1I ACTGG 7 cut(s) 356, 597, 817, 1432, 1964, 2123, 2189
Bse3DI GCAATG 2 cut(s) 1155, 2049
BseBI CCWGG 3 cut(s) 1269, 1778, 2168
BseDI CCNNGG 8 cut(s) 897, 1255, 1653, 1669, 1776, 1861, 2166, 2274
BseGI GGATG 7 cut(s) 222, 664, 850, 1458, 2026, 2115, 2264
BseLI CCNNNNNNNGG 2 cut(s) 84, 158
BseMI GCAATG 2 cut(s) 1155, 2049
BseMII CTCAG 5 cut(s) 237, 858, 1020, 1949, 2300
BseNI ACTGG 7 cut(s) 356, 597, 817, 1432, 1964, 2123, 2189
BseRI GAGGAG 1 cut(s) 1378
BseSI GKGCMC 1 cut(s) 991
BseXI GCAGC 7 cut(s) 41, 44, 211, 956, 1825, 1887, 1918
BseYI CCCAGC 1 cut(s) 2234
BshFI GGCC 6 cut(s) 476, 799, 1556, 1719, 1852, 2001
BshNI GGYRCC 2 cut(s) 570, 974
BshTI ACCGGT 1 cut(s) 1682
BsiHKAI GWGCWC 2 cut(s) 420, 991
BsiHKCI CYCGRG 1 cut(s) 2273
BsiSI CCGG 3 cut(s) 1557, 1662, 1683
BslFI GGGAC 2 cut(s) 1156, 1190
BslI CCNNNNNNNGG 2 cut(s) 84, 158
BsmAI GTCTC 1 cut(s) 1894
BsmFI GGGAC 2 cut(s) 1156, 1190
BsmI GAATGC 2 cut(s) 329, 1844
BsnI GGCC 6 cut(s) 476, 799, 1556, 1719, 1852, 2001
BsoBI CYCGRG 1 cut(s) 2273
Bsp1286I GDGCHC 4 cut(s) 420, 991, 1039, 2187
Bsp1407I TGTACA 1 cut(s) 1165
Bsp143I GATC 9 cut(s) 291, 443, 577, 613, 1149, 1367, 1479, 1657, 2295
Bsp19I CCATGG 2 cut(s) 1653, 1861
BspACI CCGC 5 cut(s) 278, 568, 978, 1841, 2247
BspANI GGCC 6 cut(s) 476, 799, 1556, 1719, 1852, 2001
BspCNI CTCAG 5 cut(s) 238, 859, 1021, 1948, 2299
BspLI GGNNCC 8 cut(s) 354, 572, 976, 1038, 1659, 1666, 1982, 2184
BspMI ACCTGC 2 cut(s) 2020, 2170
BspPI GGATC 8 cut(s) 299, 451, 608, 1144, 1474, 1652, 1665, 2290
BspT107I GGYRCC 2 cut(s) 570, 974
BsrDI GCAATG 2 cut(s) 1155, 2049
BsrFI RCCGGY 1 cut(s) 1682
BsrGI TGTACA 1 cut(s) 1165
BsrI ACTGG 7 cut(s) 356, 597, 817, 1432, 1964, 2123, 2189
BssAI RCCGGY 1 cut(s) 1682
BssECI CCNNGG 8 cut(s) 897, 1255, 1653, 1669, 1776, 1861, 2166, 2274
BssMI GATC 9 cut(s) 291, 443, 577, 613, 1149, 1367, 1479, 1657, 2295
BssNAI GTATAC 1 cut(s) 400
BssNI GRCGYC 1 cut(s) 571
BssSI CACGAG 1 cut(s) 638
BssT1I CCWWGG 5 cut(s) 897, 1255, 1653, 1669, 1861
Bst1107I GTATAC 1 cut(s) 400
Bst2BI CACGAG 1 cut(s) 638
Bst2UI CCWGG 3 cut(s) 1269, 1778, 2168
Bst4CI ACNGT 5 cut(s) 144, 394, 589, 628, 1170
BstACI GRCGYC 1 cut(s) 571
BstAUI TGTACA 1 cut(s) 1165
BstC8I GCNNGC 2 cut(s) 222, 942
BstDEI CTNAG 7 cut(s) 246, 804, 867, 1029, 1577, 1935, 2286
BstDSI CCRYGG 2 cut(s) 1653, 1861
BstF5I GGATG 7 cut(s) 222, 664, 850, 1458, 2026, 2115, 2264
BstH2I RGCGCY 1 cut(s) 574
BstHHI GCGC 2 cut(s) 573, 1869
BstKTI GATC 9 cut(s) 294, 446, 580, 616, 1152, 1370, 1482, 1660, 2298
BstMAI GTCTC 1 cut(s) 1894
BstMBI GATC 9 cut(s) 291, 443, 577, 613, 1149, 1367, 1479, 1657, 2295
BstMWI GCNNNNNNNGC 5 cut(s) 29, 335, 986, 1562, 2244
BstNI CCWGG 3 cut(s) 1269, 1778, 2168
BstNSI RCATGY 1 cut(s) 501
BstSCI CCNGG 4 cut(s) 1267, 1660, 1776, 2166
BstSFI CTRYAG 1 cut(s) 393
BstSLI GKGCMC 1 cut(s) 991
BstV1I GCAGC 7 cut(s) 41, 44, 211, 956, 1825, 1887, 1918
BstV2I GAAGAC 2 cut(s) 1493, 1634
BstX2I RGATCY 4 cut(s) 291, 613, 1479, 1657
BstXI CCANNNNNNTGG 2 cut(s) 363, 1020
BstYI RGATCY 4 cut(s) 291, 613, 1479, 1657
BstZ17I GTATAC 1 cut(s) 400
BsuRI GGCC 6 cut(s) 476, 799, 1556, 1719, 1852, 2001
BtgI CCRYGG 2 cut(s) 1653, 1861
BtgZI GCGATG 1 cut(s) 310
BtsCI GGATG 7 cut(s) 222, 664, 850, 1458, 2026, 2115, 2264
BtsI GCAGTG 2 cut(s) 48, 1946
BtsIMutI CAGTG 4 cut(s) 48, 1425, 1946, 1971
BveI ACCTGC 2 cut(s) 2020, 2170
Cac8I GCNNGC 2 cut(s) 222, 942
CaiI CAGNNNCTG 2 cut(s) 245, 617
CfoI GCGC 2 cut(s) 573, 1869
Cfr10I RCCGGY 1 cut(s) 1682
Cfr13I GGNCC 1 cut(s) 1554
Csp6I GTAC 4 cut(s) 520, 590, 1166, 2113
CspAI ACCGGT 1 cut(s) 1682
CviAII CATG 7 cut(s) 260, 349, 498, 937, 1654, 1862, 2089
CviQI GTAC 4 cut(s) 520, 590, 1166, 2113
DdeI CTNAG 7 cut(s) 246, 804, 867, 1029, 1577, 1935, 2286
DinI GGCGCC 1 cut(s) 572
DpnI GATC 9 cut(s) 293, 445, 579, 615, 1151, 1369, 1481, 1659, 2297
DpnII GATC 9 cut(s) 291, 443, 577, 613, 1149, 1367, 1479, 1657, 2295
Ecl136II GAGCTC 1 cut(s) 418
Eco130I CCWWGG 5 cut(s) 897, 1255, 1653, 1669, 1861
Eco24I GRGCYC 3 cut(s) 420, 1039, 2187
Eco32I GATATC 1 cut(s) 19
Eco53kI GAGCTC 1 cut(s) 418
Eco57I CTGAAG 2 cut(s) 172, 943
Eco88I CYCGRG 1 cut(s) 2273
EcoICRI GAGCTC 1 cut(s) 418
EcoRI GAATTC 1 cut(s) 385
EcoRII CCWGG 3 cut(s) 1267, 1776, 2166
EcoRV GATATC 1 cut(s) 19
EcoT14I CCWWGG 5 cut(s) 897, 1255, 1653, 1669, 1861
EcoT38I GRGCYC 3 cut(s) 420, 1039, 2187
EgeI GGCGCC 1 cut(s) 572
EheI GGCGCC 1 cut(s) 572
ErhI CCWWGG 5 cut(s) 897, 1255, 1653, 1669, 1861
FaeI CATG 7 cut(s) 263, 352, 501, 940, 1657, 1865, 2092
FalI AAGNNNNNCTT 4 cut(s) 1505, 1537, 2085, 2117
FaqI GGGAC 2 cut(s) 1156, 1190
FatI CATG 7 cut(s) 259, 348, 497, 936, 1653, 1861, 2088
FauNDI CATATG 3 cut(s) 1081, 1783, 1976
FbaI TGATCA 1 cut(s) 577
FblI GTMKAC 2 cut(s) 111, 399
FokI GGATG 7 cut(s) 229, 651, 857, 1445, 2013, 2102, 2251
FriOI GRGCYC 3 cut(s) 420, 1039, 2187
FspBI CTAG 6 cut(s) 251, 335, 780, 1358, 1374, 1448
GlaI GCGC 2 cut(s) 572, 1868
GsaI CCCAGC 1 cut(s) 2238
GsuI CTGGAG 1 cut(s) 1023
HaeII RGCGCY 1 cut(s) 574
HaeIII GGCC 6 cut(s) 476, 799, 1556, 1719, 1852, 2001
HapII CCGG 3 cut(s) 1557, 1662, 1683
HhaI GCGC 2 cut(s) 573, 1869
Hin1I GRCGYC 1 cut(s) 571
Hin1II CATG 7 cut(s) 263, 352, 501, 940, 1657, 1865, 2092
Hin6I GCGC 2 cut(s) 571, 1867
HinP1I GCGC 2 cut(s) 571, 1867
HincII GTYRAC 5 cut(s) 256, 661, 1026, 1941, 1971
HindII GTYRAC 5 cut(s) 256, 661, 1026, 1941, 1971
HinfI GANTC 6 cut(s) 88, 178, 272, 460, 1573, 2080
HpaII CCGG 3 cut(s) 1557, 1662, 1683
HphI GGTGA 6 cut(s) 1126, 1580, 1636, 1697, 1731, 2147
HpyCH4III ACNGT 5 cut(s) 144, 394, 589, 628, 1170
HpyCH4IV ACGT 1 cut(s) 1812
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 335, 986, 1562, 2244
HpyF3I CTNAG 7 cut(s) 246, 804, 867, 1029, 1577, 1935, 2286
HpySE526I ACGT 1 cut(s) 1812
Hsp92I GRCGYC 1 cut(s) 571
Hsp92II CATG 7 cut(s) 263, 352, 501, 940, 1657, 1865, 2092
HspAI GCGC 2 cut(s) 571, 1867
KasI GGCGCC 1 cut(s) 570
Ksp22I TGATCA 1 cut(s) 577
Kzo9I GATC 9 cut(s) 291, 443, 577, 613, 1149, 1367, 1479, 1657, 2295
LmnI GCTCC 3 cut(s) 1042, 1416, 2182
Lsp1109I GCAGC 7 cut(s) 41, 44, 211, 956, 1825, 1887, 1918
LweI GCATC 6 cut(s) 207, 566, 835, 1878, 2146, 2273
MaeI CTAG 6 cut(s) 251, 335, 780, 1358, 1374, 1448
MaeII ACGT 1 cut(s) 1812
MaeIII GTNAC 4 cut(s) 138, 1084, 1737, 2003
MalI GATC 9 cut(s) 293, 445, 579, 615, 1151, 1369, 1481, 1659, 2297
MboI GATC 9 cut(s) 291, 443, 577, 613, 1149, 1367, 1479, 1657, 2295
MfeI CAATTG 2 cut(s) 361, 1491
MflI RGATCY 4 cut(s) 291, 613, 1479, 1657
MhlI GDGCHC 4 cut(s) 420, 991, 1039, 2187
Mly113I GGCGCC 1 cut(s) 571
MlyI GAGTC 2 cut(s) 266, 454
MmeI TCCRAC 1 cut(s) 249
MroXI GAANNNNTTC 2 cut(s) 1613, 2096
MseI TTAA 4 cut(s) 132, 771, 1916, 2302
MspA1I CMGCKG 1 cut(s) 980
MspI CCGG 3 cut(s) 1557, 1662, 1683
MspR9I CCNGG 4 cut(s) 1269, 1662, 1778, 2168
MunI CAATTG 2 cut(s) 361, 1491
Mva1269I GAATGC 2 cut(s) 329, 1844
MvaI CCWGG 3 cut(s) 1269, 1778, 2168
MwoI GCNNNNNNNGC 5 cut(s) 29, 335, 986, 1562, 2244
NarI GGCGCC 1 cut(s) 571
NciI CCSGG 1 cut(s) 1662
NcoI CCATGG 2 cut(s) 1653, 1861
NdeI CATATG 3 cut(s) 1081, 1783, 1976
NdeII GATC 9 cut(s) 291, 443, 577, 613, 1149, 1367, 1479, 1657, 2295
NlaIII CATG 7 cut(s) 263, 352, 501, 940, 1657, 1865, 2092
NlaIV GGNNCC 8 cut(s) 354, 572, 976, 1038, 1659, 1666, 1982, 2184
NmuCI GTSAC 1 cut(s) 1737
NspI RCATGY 1 cut(s) 501
PaqCI CACCTGC 1 cut(s) 2170
PcsI WCGNNNNNNNCGW 1 cut(s) 2212
PctI GAATGC 2 cut(s) 329, 1844
PdmI GAANNNNTTC 2 cut(s) 1613, 2096
PfeI GAWTC 4 cut(s) 88, 178, 1573, 2080
PfoI TCCNGGA 1 cut(s) 1660
PinAI ACCGGT 1 cut(s) 1682
PleI GAGTC 2 cut(s) 266, 454
PluTI GGCGCC 1 cut(s) 574
PpsI GAGTC 2 cut(s) 266, 454
PsiI TTATAA 1 cut(s) 1808
Psp124BI GAGCTC 1 cut(s) 420
Psp6I CCWGG 3 cut(s) 1267, 1776, 2166
PspFI CCCAGC 1 cut(s) 2234
PspGI CCWGG 3 cut(s) 1267, 1776, 2166
PspN4I GGNNCC 8 cut(s) 354, 572, 976, 1038, 1659, 1666, 1982, 2184
PspPI GGNCC 1 cut(s) 1554
PsrI GAACNNNNNNTAC 2 cut(s) 1680, 1712
PstNI CAGNNNCTG 2 cut(s) 245, 617
PsuI RGATCY 4 cut(s) 291, 613, 1479, 1657
RsaI GTAC 4 cut(s) 521, 591, 1167, 2114
RsaNI GTAC 4 cut(s) 520, 590, 1166, 2113
SacI GAGCTC 1 cut(s) 420
SaqAI TTAA 4 cut(s) 132, 771, 1916, 2302
Sau3AI GATC 9 cut(s) 291, 443, 577, 613, 1149, 1367, 1479, 1657, 2295
Sau96I GGNCC 1 cut(s) 1554
ScaI AGTACT 1 cut(s) 591
SchI GAGTC 2 cut(s) 266, 454
ScrFI CCNGG 4 cut(s) 1269, 1662, 1778, 2168
SduI GDGCHC 4 cut(s) 420, 991, 1039, 2187
SfaNI GCATC 6 cut(s) 207, 566, 835, 1878, 2146, 2273
SfcI CTRYAG 1 cut(s) 393
SfoI GGCGCC 1 cut(s) 572
SgrAI CRCCGGYG 1 cut(s) 1682
SmlI CTYRAG 1 cut(s) 286
SmoI CTYRAG 1 cut(s) 286
SsiI CCGC 5 cut(s) 278, 568, 978, 1841, 2247
SspDI GGCGCC 1 cut(s) 570
SspI AATATT 1 cut(s) 43
SspMI CTAG 6 cut(s) 251, 335, 780, 1358, 1374, 1448
SstI GAGCTC 1 cut(s) 420
StyD4I CCNGG 4 cut(s) 1267, 1660, 1776, 2166
StyI CCWWGG 5 cut(s) 897, 1255, 1653, 1669, 1861
TaaI ACNGT 5 cut(s) 144, 394, 589, 628, 1170
TaiI ACGT 1 cut(s) 1815
TaqI TCGA 2 cut(s) 967, 2215
TatI WGTACW 2 cut(s) 589, 1165
TauI GCSGC 3 cut(s) 571, 980, 1844
TfiI GAWTC 4 cut(s) 88, 178, 1573, 2080
Tru1I TTAA 4 cut(s) 132, 771, 1916, 2302
Tru9I TTAA 4 cut(s) 132, 771, 1916, 2302
TscAI CASTG 4 cut(s) 55, 1432, 1953, 1971
TseFI GTSAC 1 cut(s) 1737
TseI GCWGC 7 cut(s) 29, 32, 224, 944, 1838, 1900, 1931
Tsp45I GTSAC 1 cut(s) 1737
TspGWI ACGGA 1 cut(s) 141
TspRI CASTG 4 cut(s) 55, 1432, 1953, 1971
VneI GTGCAC 1 cut(s) 987
XbaI TCTAGA 2 cut(s) 779, 1357
XceI RCATGY 1 cut(s) 501
XmiI GTMKAC 2 cut(s) 111, 399
XmnI GAANNNNTTC 2 cut(s) 1613, 2096
XspI CTAG 6 cut(s) 251, 335, 780, 1358, 1374, 1448
ZrmI AGTACT 1 cut(s) 591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.