MD17G1133700.v1.1
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
11935244 .. 11935552
309 bp
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UTR
Exon/CDS
Intron
MD17G1133700.v1.1.491

Sequence Viewer

Length: 309 bp
ATGGTCCTTCACATTCTCTTTGCCTCAGTTTTGGGCTTTCCTTCAGACCCTAAGATCATACAAGAAAGTGAAGAAAAGTTGGGAAGAGTGTTGGACATTTACGAGGAGCGGCTGTCGAAGAGTAAGTACTTGGCTGGTGATTTCTTTAGCCTTGCTGATTTTAGCCACCTTCCGCTCACTCAATTCTTGGTGGCTAATATGGGGAAGGAGTATATGATCAAGGACAGAAAGCATGTCTCTGCATTGTGGGATGACATTAGCAACATACCATCTTGGAAGAGGGTCCTCCAGTTTGGTTCCCCATTTTAA

Protein Analysis

103

Amino Acids

11.75

Weight (kDa)

6.27

Isoelectric Point (pI)

49.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_C PF00043 19 - 90 4.2e-12 Glutathione S-transferase, C-terminal domain
GST_C_3 PF14497 23 - 92 1.9e-06 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024443)

Species Orthologous Gene IDs
malus_domestica MD17G1133700.v1.1
pyrus_communis pycom09g06770 pycom17g12820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 109, 175
AciI CCGC 2 cut(s) 109, 173
AcuI CTGAAG 1 cut(s) 27
AfaI GTAC 1 cut(s) 128
Alw26I GTCTC 1 cut(s) 241
AspS9I GGNCC 2 cut(s) 4, 283
AsuHPI GGTGA 1 cut(s) 149
AvaII GGWCC 2 cut(s) 4, 283
BarI GAAGNNNNNNTAC 2 cut(s) 110, 142
BccI CCATC 1 cut(s) 277
BclI TGATCA 1 cut(s) 216
BcoDI GTCTC 1 cut(s) 241
BisI GCNGC 1 cut(s) 110
BlsI GCNGC 1 cut(s) 111
BmcAI AGTACT 1 cut(s) 128
Bme18I GGWCC 2 cut(s) 4, 283
BmgT120I GGNCC 2 cut(s) 4, 283
BmiI GGNNCC 2 cut(s) 284, 298
BpmI CTGGAG 1 cut(s) 272
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bse1I ACTGG 1 cut(s) 289
BseGI GGATG 1 cut(s) 256
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 1 cut(s) 289
BseRI GAGGAG 1 cut(s) 119
BsmAI GTCTC 1 cut(s) 241
Bsp143I GATC 2 cut(s) 54, 216
BspACI CCGC 2 cut(s) 109, 173
BspCNI CTCAG 1 cut(s) 38
BspLI GGNNCC 2 cut(s) 284, 298
BsrBI CCGCTC 2 cut(s) 109, 175
BsrI ACTGG 1 cut(s) 289
BssMI GATC 2 cut(s) 54, 216
Bst6I CTCTTC 3 cut(s) 79, 113, 272
BstDEI CTNAG 2 cut(s) 25, 51
BstF5I GGATG 1 cut(s) 256
BstKTI GATC 2 cut(s) 57, 219
BstMAI GTCTC 1 cut(s) 241
BstMBI GATC 2 cut(s) 54, 216
BstNSI RCATGY 1 cut(s) 236
BtsCI GGATG 1 cut(s) 256
Cfr13I GGNCC 2 cut(s) 4, 283
Csp6I GTAC 1 cut(s) 127
CviAII CATG 1 cut(s) 233
CviJI RGCY 6 cut(s) 36, 112, 134, 150, 165, 194
CviKI_1 RGCY 6 cut(s) 36, 112, 134, 150, 165, 194
CviQI GTAC 1 cut(s) 127
DdeI CTNAG 2 cut(s) 25, 51
DpnI GATC 2 cut(s) 56, 218
DpnII GATC 2 cut(s) 54, 216
Eam1104I CTCTTC 3 cut(s) 79, 113, 272
EarI CTCTTC 3 cut(s) 79, 113, 272
Eco47I GGWCC 2 cut(s) 4, 283
Eco57I CTGAAG 1 cut(s) 27
EcoO109I RGGNCCY 1 cut(s) 283
FaeI CATG 1 cut(s) 236
FaiI YATR 6 cut(s) 59, 200, 213, 215, 234, 266
FatI CATG 1 cut(s) 232
FbaI TGATCA 1 cut(s) 216
Fnu4HI GCNGC 1 cut(s) 110
FokI GGATG 1 cut(s) 263
Fsp4HI GCNGC 1 cut(s) 110
GluI GCNGC 1 cut(s) 110
GsuI CTGGAG 1 cut(s) 272
Hin1II CATG 1 cut(s) 236
HphI GGTGA 1 cut(s) 149
Hpy188I TCNGA 1 cut(s) 46
HpyAV CCTTC 4 cut(s) 17, 51, 179, 199
HpyCH4V TGCA 1 cut(s) 242
HpyF3I CTNAG 2 cut(s) 25, 51
Hsp92II CATG 1 cut(s) 236
Ksp22I TGATCA 1 cut(s) 216
Kzo9I GATC 2 cut(s) 54, 216
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 2 cut(s) 120, 302
MalI GATC 2 cut(s) 56, 218
MbiI CCGCTC 2 cut(s) 109, 175
MboI GATC 2 cut(s) 54, 216
MboII GAAGA 4 cut(s) 83, 96, 130, 289
MluCI AATT 1 cut(s) 182
MmeI TCCRAC 1 cut(s) 72
MnlI CCTC 4 cut(s) 34, 97, 273, 296
MseI TTAA 1 cut(s) 307
NdeII GATC 2 cut(s) 54, 216
NlaIII CATG 1 cut(s) 236
NlaIV GGNNCC 2 cut(s) 284, 298
NspI RCATGY 1 cut(s) 236
PkrI GCNGC 1 cut(s) 111
PpuMI RGGWCCY 1 cut(s) 283
Psp5II RGGWCCY 1 cut(s) 283
PspN4I GGNNCC 2 cut(s) 284, 298
PspPI GGNCC 2 cut(s) 4, 283
PspPPI RGGWCCY 1 cut(s) 283
RsaI GTAC 1 cut(s) 128
RsaNI GTAC 1 cut(s) 127
SaqAI TTAA 1 cut(s) 307
SatI GCNGC 1 cut(s) 110
Sau3AI GATC 2 cut(s) 54, 216
Sau96I GGNCC 2 cut(s) 4, 283
ScaI AGTACT 1 cut(s) 128
SetI ASST 1 cut(s) 171
SinI GGWCC 2 cut(s) 4, 283
Sse9I AATT 1 cut(s) 182
SsiI CCGC 2 cut(s) 109, 173
TaqI TCGA 1 cut(s) 116
TasI AATT 1 cut(s) 182
TatI WGTACW 1 cut(s) 126
TauI GCSGC 1 cut(s) 112
Tru1I TTAA 1 cut(s) 307
Tru9I TTAA 1 cut(s) 307
VpaK11BI GGWCC 2 cut(s) 4, 283
XceI RCATGY 1 cut(s) 236
ZrmI AGTACT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.