pycom09g06770
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
4999616 .. 4999909
294 bp
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UTR
Exon/CDS
Intron
pycom09g06770.1

Sequence Viewer

Length: 294 bp
ATGGGGAAGGAGTATATGATTAGGGACAGAAAGCATGTCTCTGCTTGGTGGGATGGCATTAGCAACAGACCATCTTGGAAGAGGGTTCTCCAGTTTGGTGCTACAAGAAAATGGCCCTTCTACGGCACTTTTTGTGCGACAGATAACAAGGCCGTCGCAAACAAAAGATTTTTTTTTTTAATTTTTCAATTTGGCGCTTTATTTTCAGATGAAAACAATCCAACGCGCCTTCATTTTCATTCTCTAGAATCATCCTTCTCTCTCTGCACCTTTTCCACTTTCCTATTCGACTGA

Protein Analysis

98

Amino Acids

11.5

Weight (kDa)

9.62

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024443)

Species Orthologous Gene IDs
malus_domestica MD17G1133700.v1.1
pyrus_communis pycom09g06770 pycom17g12820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 226
AfiI CCNNNNNNNGG 1 cut(s) 122
AgsI TTSAA 1 cut(s) 188
Alw26I GTCTC 1 cut(s) 43
AoxI GGCC 2 cut(s) 113, 150
AspLEI GCGC 2 cut(s) 197, 228
AspS9I GGNCC 1 cut(s) 114
BccI CCATC 2 cut(s) 47, 79
BceAI ACGGC 2 cut(s) 137, 139
BcoDI GTCTC 1 cut(s) 43
BfaI CTAG 1 cut(s) 245
BfoI RGCGCY 1 cut(s) 198
BmgT120I GGNCC 1 cut(s) 114
BpmI CTGGAG 1 cut(s) 74
Bsc4I CCNNNNNNNGG 1 cut(s) 122
Bse1I ACTGG 1 cut(s) 91
BseGI GGATG 2 cut(s) 58, 251
BseLI CCNNNNNNNGG 1 cut(s) 122
BseNI ACTGG 1 cut(s) 91
BsgI GTGCAG 1 cut(s) 250
Bsh1236I CGCG 1 cut(s) 226
BshFI GGCC 2 cut(s) 115, 152
BslFI GGGAC 1 cut(s) 38
BslI CCNNNNNNNGG 1 cut(s) 122
BsmAI GTCTC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 38
BsnI GGCC 2 cut(s) 115, 152
BspANI GGCC 2 cut(s) 115, 152
BspFNI CGCG 1 cut(s) 226
BsrI ACTGG 1 cut(s) 91
Bst6I CTCTTC 1 cut(s) 74
BstF5I GGATG 2 cut(s) 58, 251
BstFNI CGCG 1 cut(s) 226
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 2 cut(s) 197, 228
BstMAI GTCTC 1 cut(s) 43
BstNSI RCATGY 1 cut(s) 38
BstUI CGCG 1 cut(s) 226
BsuRI GGCC 2 cut(s) 115, 152
BtsCI GGATG 2 cut(s) 58, 251
CfoI GCGC 2 cut(s) 197, 228
Cfr13I GGNCC 1 cut(s) 114
CviAII CATG 1 cut(s) 35
CviJI RGCY 2 cut(s) 115, 152
CviKI_1 RGCY 2 cut(s) 115, 152
Eam1104I CTCTTC 1 cut(s) 74
EarI CTCTTC 1 cut(s) 74
FaeI CATG 1 cut(s) 38
FaiI YATR 3 cut(s) 15, 17, 36
FaqI GGGAC 1 cut(s) 38
FatI CATG 1 cut(s) 34
FokI GGATG 2 cut(s) 65, 238
FspBI CTAG 1 cut(s) 245
GlaI GCGC 2 cut(s) 196, 227
GsuI CTGGAG 1 cut(s) 74
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 2 cut(s) 115, 152
HhaI GCGC 2 cut(s) 197, 228
Hin1II CATG 1 cut(s) 38
Hin6I GCGC 2 cut(s) 195, 226
HinP1I GCGC 2 cut(s) 195, 226
HinfI GANTC 1 cut(s) 248
Hpy188I TCNGA 1 cut(s) 208
Hpy188III TCNNGA 1 cut(s) 245
Hpy99I CGWCG 1 cut(s) 158
HpyAV CCTTC 3 cut(s) 127, 239, 265
HpyCH4V TGCA 1 cut(s) 267
Hsp92II CATG 1 cut(s) 38
HspAI GCGC 2 cut(s) 195, 226
LpnPI CCDG 1 cut(s) 104
MaeI CTAG 1 cut(s) 245
MboII GAAGA 1 cut(s) 91
MluCI AATT 2 cut(s) 180, 188
MmeI TCCRAC 1 cut(s) 245
MnlI CCTC 1 cut(s) 75
MseI TTAA 1 cut(s) 179
MvnI CGCG 1 cut(s) 226
NlaIII CATG 1 cut(s) 38
NspI RCATGY 1 cut(s) 38
PfeI GAWTC 1 cut(s) 248
PspPI GGNCC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 179
Sau96I GGNCC 1 cut(s) 114
SetI ASST 1 cut(s) 272
SgeI CNNG 8 cut(s) 47, 57, 87, 103, 117, 160, 237, 257
Sse9I AATT 2 cut(s) 180, 188
SspMI CTAG 1 cut(s) 245
TaqI TCGA 1 cut(s) 288
TasI AATT 2 cut(s) 180, 188
TfiI GAWTC 1 cut(s) 248
Tru1I TTAA 1 cut(s) 179
Tru9I TTAA 1 cut(s) 179
TspDTI ATGAA 3 cut(s) 221, 225, 227
XbaI TCTAGA 1 cut(s) 244
XceI RCATGY 1 cut(s) 38
XspI CTAG 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.