MD17G1265700.v1.1

phospholipase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
32623335 .. 32633090
9756 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1265700.v1.1.491

Sequence Viewer

Length: 1353 bp
ATGGGAAACAATAATGCTAAACATACAAAAATAACAAGCCATCCTCTCCCTCCGACGCCCATGGCCACCAACCAAACAGCTGATCATCCAGCAGCTGCATGGTCAGAGCTTCTAGGCTCAAACAACTGGGATGGCCTCTTGGACCCTCTAGACCTCAATCTCCGAACCCACATCCTCCGCTGCGGCAACTTCTGCCAGGCCACCTACGACGCCTTCAACAACGACCAAAACTCCAAGTACTGCGGATCCAGCCGCTATGGCAAACACTCCTTCTTCGACAAGGTCATGCTCCAAGACGCCGCCAACTACCAAGTCTCTTGCTTCCTCTACGCCACCGCCCAAGTCAGCGTCCCCGAAGCCTTGCTTCTCCACTCCCAGTCCCGTGAGTCGTGGGATCGCGAGTCTAACTGGATCGGCTACATCGCTGTCACCACCGATGAAGTCAGCAAAGCCATCGGTCGGCGTGAAATCTACGTCGCATGGCGCGGCACGATTAGAAACTACGAGTGGATTAATGGGATGGGAGCTGAGCTGGAGTCCGTGGAGAATATCTTAGGTTCTTCTCATGCCAATGGCCATCAAAATCACCATGACAAGGATGACGATGAAGATGAAGAAGAAGTGCCGAAAGCCATGAGGGGTTGGCTTACAATGTACATTTCCAACGACCCGAAATCCCCGTTTACAAAAACAAGCGCCAGAGTTCAACTTGTGACAAAAATCAACGAGCTGAGGAACAAGTACAAGGACGAGAAGCTGAGCATAACCATGACAGGACACAGTCTCGGTGCGAGTTTATCGGTTTTGAGCGCTTTCGATTTGGCCGAAAATGGGGTATCCGATATCCCAATTGCGGTTTTTGTATTTGGTTGTCCACATATCGGAAACAAGGCACTGAAAAGGCGGATTGAGAGGCACCCGAATCTGAAGATACTGCATATTAAGAACACCATCGATGTTATTCCGCACTATCCGGTTCATGTAATGGGGTACCGGAAGGTCGGGACGGAGCTTTTGATTGATACGAGGAAGTCGCCATTCTTGAAGGAGTCGAAGAATCCGTTCGACTGGCATAACTTGGAAGGGATGCTGCATGTGGTGGCCGGGTGGAACGGGGAGGAAGGGGATTTTGAGCTAAGGGTGAAGAGGAGCGTGGCGTTGGTGAACAAGTCTAGTGATTTTCTCAAGGAGGAGTGTCATGTGCCGGCGGTGTGGTGGGTGGAGAAGAACAGAGGGATGGTGCTTGATGAGAGCGGCGGGGAGTGGAACAGAGGCATGGTGCTTGATAAGAGCAGCGGAGAGTGGGTGTTGTCTCCGCCGTCTGATGAGGATCTACCGGCCCCTGAGTTTTGA

Protein Analysis

451

Amino Acids

50.74

Weight (kDa)

5.88

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 158 - 327 6.9e-27 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012940)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 990
AccB1I GGYRCC 2 cut(s) 915, 990
AccBSI CCGCTC 1 cut(s) 1254
AccII CGCG 2 cut(s) 399, 486
AclWI GGATC 5 cut(s) 240, 253, 402, 419, 1338
AcoI YGGCCR 4 cut(s) 63, 574, 822, 1101
AcuI CTGAAG 1 cut(s) 947
AcyI GRCGYC 3 cut(s) 56, 210, 297
AfaI GTAC 4 cut(s) 239, 656, 743, 992
AfeI AGCGCT 1 cut(s) 811
AfiI CCNNNNNNNGG 5 cut(s) 459, 595, 831, 853, 881
AgsI TTSAA 3 cut(s) 217, 707, 1045
AjnI CCWGG 1 cut(s) 195
AluBI AGCT 9 cut(s) 80, 95, 109, 527, 532, 730, 757, 1012, 1135
AluI AGCT 9 cut(s) 80, 95, 109, 527, 532, 730, 757, 1012, 1135
Alw26I GTCTC 3 cut(s) 319, 788, 1317
AlwI GGATC 5 cut(s) 240, 253, 402, 419, 1338
AlwNI CAGNNNCTG 1 cut(s) 95
Aor51HI AGCGCT 1 cut(s) 811
AoxI GGCC 7 cut(s) 63, 133, 198, 574, 822, 1101, 1338
ApeKI GCWGC 5 cut(s) 92, 95, 180, 1090, 1293
ArsI GACNNNNNNTTYG 2 cut(s) 997, 1029
AseI ATTAAT 1 cut(s) 513
Asp700I GAANNNNTTC 1 cut(s) 1061
Asp718I GGTACC 1 cut(s) 990
AspLEI GCGC 3 cut(s) 486, 698, 812
AspS9I GGNCC 2 cut(s) 142, 1339
AsuC2I CCSGG 1 cut(s) 1105
AsuHPI GGTGA 4 cut(s) 421, 578, 1153, 1174
AvaII GGWCC 1 cut(s) 142
BalI TGGCCA 2 cut(s) 65, 576
BamHI GGATCC 1 cut(s) 245
BanI GGYRCC 2 cut(s) 915, 990
BbvCI CCTCAGC 1 cut(s) 731
BbvI GCAGC 5 cut(s) 82, 104, 167, 1077, 1305
BccI CCATC 7 cut(s) 48, 125, 461, 514, 585, 959, 1231
BceAI ACGGC 1 cut(s) 1303
BcgI CGANNNNNNTGC 2 cut(s) 436, 470
BciT130I CCWGG 1 cut(s) 197
BciVI GTATCC 1 cut(s) 847
BclI TGATCA 1 cut(s) 82
BcnI CCSGG 1 cut(s) 1105
BcoDI GTCTC 3 cut(s) 319, 788, 1317
BfaI CTAG 3 cut(s) 113, 149, 1173
BfoI RGCGCY 2 cut(s) 699, 813
BfuI GTATCC 1 cut(s) 847
BglI GCCNNNNNGGC 1 cut(s) 258
BlpI GCTNAGC 2 cut(s) 528, 758
BmcAI AGTACT 1 cut(s) 239
Bme1390I CCNGG 2 cut(s) 197, 1105
Bme18I GGWCC 1 cut(s) 142
BmgT120I GGNCC 2 cut(s) 142, 1339
BmiI GGNNCC 5 cut(s) 144, 247, 917, 992, 1341
BmrFI CCNGG 2 cut(s) 197, 1105
BmrI ACTGGG 2 cut(s) 136, 370
BmsI GCATC 1 cut(s) 1077
BmuI ACTGGG 2 cut(s) 136, 370
BpmI CTGGAG 1 cut(s) 554
Bpu10I CCTNAGC 2 cut(s) 731, 1136
Bpu1102I GCTNAGC 2 cut(s) 528, 758
BpuEI CTTGAG 1 cut(s) 1169
BpuMI CCSGG 1 cut(s) 1105
Bsa29I ATCGAT 1 cut(s) 954
BsaBI GATNNNNATC 1 cut(s) 1329
BsaHI GRCGYC 3 cut(s) 56, 210, 297
BsaJI CCNNGG 2 cut(s) 60, 540
BsaWI WCCGGW 2 cut(s) 973, 993
BsaXI ACNNNNNCTCC 4 cut(s) 215, 245, 1290, 1320
Bsc4I CCNNNNNNNGG 5 cut(s) 459, 595, 831, 853, 881
Bse118I RCCGGY 2 cut(s) 1204, 1336
Bse1I ACTGG 4 cut(s) 131, 376, 413, 1073
Bse8I GATNNNNATC 1 cut(s) 1329
BseBI CCWGG 1 cut(s) 197
BseCI ATCGAT 1 cut(s) 954
BseDI CCNNGG 2 cut(s) 60, 540
BseGI GGATG 8 cut(s) 40, 85, 136, 171, 525, 604, 1092, 1242
BseJI GATNNNNATC 1 cut(s) 1329
BseLI CCNNNNNNNGG 5 cut(s) 459, 595, 831, 853, 881
BseMII CTCAG 4 cut(s) 519, 722, 749, 1335
BseNI ACTGG 4 cut(s) 131, 376, 413, 1073
BseRI GAGGAG 2 cut(s) 1162, 1205
BseXI GCAGC 5 cut(s) 82, 104, 167, 1077, 1305
Bsh1236I CGCG 2 cut(s) 399, 486
Bsh1285I CGRYCG 1 cut(s) 460
BshFI GGCC 7 cut(s) 65, 135, 200, 576, 824, 1103, 1340
BshNI GGYRCC 2 cut(s) 915, 990
BshVI ATCGAT 1 cut(s) 954
BsiEI CGRYCG 1 cut(s) 460
BsiSI CCGG 5 cut(s) 974, 994, 1104, 1205, 1337
BslFI GGGAC 3 cut(s) 335, 364, 1018
BslI CCNNNNNNNGG 5 cut(s) 459, 595, 831, 853, 881
BsmAI GTCTC 3 cut(s) 319, 788, 1317
BsmFI GGGAC 3 cut(s) 335, 364, 1018
BsnI GGCC 7 cut(s) 65, 135, 200, 576, 824, 1103, 1340
Bsp1407I TGTACA 1 cut(s) 654
Bsp143I GATC 5 cut(s) 82, 245, 394, 411, 1330
Bsp1720I GCTNAGC 2 cut(s) 528, 758
Bsp19I CCATGG 1 cut(s) 60
Bsp68I TCGCGA 1 cut(s) 399
BspANI GGCC 7 cut(s) 65, 135, 200, 576, 824, 1103, 1340
BspCNI CTCAG 4 cut(s) 520, 723, 750, 1336
BspDI ATCGAT 1 cut(s) 954
BspFNI CGCG 2 cut(s) 399, 486
BspLI GGNNCC 5 cut(s) 144, 247, 917, 992, 1341
BspPI GGATC 5 cut(s) 240, 253, 402, 419, 1338
BspT107I GGYRCC 2 cut(s) 915, 990
BsrBI CCGCTC 1 cut(s) 1254
BsrFI RCCGGY 2 cut(s) 1204, 1336
BsrGI TGTACA 1 cut(s) 654
BsrI ACTGG 4 cut(s) 131, 376, 413, 1073
BssAI RCCGGY 2 cut(s) 1204, 1336
BssECI CCNNGG 2 cut(s) 60, 540
BssMI GATC 5 cut(s) 82, 245, 394, 411, 1330
BssNI GRCGYC 3 cut(s) 56, 210, 297
BssT1I CCWWGG 1 cut(s) 60
Bst2UI CCWGG 1 cut(s) 197
Bst4CI ACNGT 1 cut(s) 782
Bst6I CTCTTC 1 cut(s) 1139
BstACI GRCGYC 3 cut(s) 56, 210, 297
BstAPI GCANNNNNTGC 1 cut(s) 192
BstAUI TGTACA 1 cut(s) 654
BstC8I GCNNGC 1 cut(s) 1206
BstDEI CTNAG 6 cut(s) 528, 553, 731, 758, 1136, 1344
BstDSI CCRYGG 2 cut(s) 60, 540
BstF5I GGATG 8 cut(s) 40, 85, 136, 171, 525, 604, 1092, 1242
BstFNI CGCG 2 cut(s) 399, 486
BstH2I RGCGCY 2 cut(s) 699, 813
BstHHI GCGC 3 cut(s) 486, 698, 812
BstKTI GATC 5 cut(s) 85, 248, 397, 414, 1333
BstMAI GTCTC 3 cut(s) 319, 788, 1317
BstMBI GATC 5 cut(s) 82, 245, 394, 411, 1330
BstMCI CGRYCG 1 cut(s) 460
BstMWI GCNNNNNNNGC 3 cut(s) 192, 249, 258
BstNI CCWGG 1 cut(s) 197
BstNSI RCATGY 1 cut(s) 1097
BstSCI CCNGG 2 cut(s) 195, 1103
BstUI CGCG 2 cut(s) 399, 486
BstV1I GCAGC 5 cut(s) 82, 104, 167, 1077, 1305
BstX2I RGATCY 2 cut(s) 245, 1330
BstYI RGATCY 2 cut(s) 245, 1330
Bsu15I ATCGAT 1 cut(s) 954
BsuI GTATCC 1 cut(s) 847
BsuRI GGCC 7 cut(s) 65, 135, 200, 576, 824, 1103, 1340
BsuTUI ATCGAT 1 cut(s) 954
BtgI CCRYGG 2 cut(s) 60, 540
BtgZI GCGATG 1 cut(s) 406
BtsCI GGATG 8 cut(s) 40, 85, 136, 171, 525, 604, 1092, 1242
BtsIMutI CAGTG 1 cut(s) 893
BtuMI TCGCGA 1 cut(s) 399
Cac8I GCNNGC 1 cut(s) 1206
CaiI CAGNNNCTG 1 cut(s) 95
CfoI GCGC 3 cut(s) 486, 698, 812
Cfr10I RCCGGY 2 cut(s) 1204, 1336
Cfr13I GGNCC 2 cut(s) 142, 1339
ClaI ATCGAT 1 cut(s) 954
CseI GACGC 4 cut(s) 64, 218, 305, 337
Csp6I GTAC 4 cut(s) 238, 655, 742, 991
CviQI GTAC 4 cut(s) 238, 655, 742, 991
DdeI CTNAG 6 cut(s) 528, 553, 731, 758, 1136, 1344
DpnI GATC 5 cut(s) 84, 247, 396, 413, 1332
DpnII GATC 5 cut(s) 82, 245, 394, 411, 1330
EaeI YGGCCR 4 cut(s) 63, 574, 822, 1101
Eam1104I CTCTTC 1 cut(s) 1139
EarI CTCTTC 1 cut(s) 1139
EciI GGCGGA 2 cut(s) 919, 1305
Eco130I CCWWGG 1 cut(s) 60
Eco32I GATATC 1 cut(s) 844
Eco47I GGWCC 1 cut(s) 142
Eco47III AGCGCT 1 cut(s) 811
Eco57I CTGAAG 1 cut(s) 947
EcoRII CCWGG 1 cut(s) 195
EcoRV GATATC 1 cut(s) 844
EcoT14I CCWWGG 1 cut(s) 60
ErhI CCWWGG 1 cut(s) 60
FalI AAGNNNNNCTT 2 cut(s) 348, 380
FaqI GGGAC 3 cut(s) 335, 364, 1018
FauI CCCGC 1 cut(s) 1250
FbaI TGATCA 1 cut(s) 82
FokI GGATG 8 cut(s) 27, 72, 143, 158, 532, 611, 1099, 1249
FspBI CTAG 3 cut(s) 113, 149, 1173
GlaI GCGC 3 cut(s) 485, 697, 811
GsuI CTGGAG 1 cut(s) 554
HaeII RGCGCY 2 cut(s) 699, 813
HaeIII GGCC 7 cut(s) 65, 135, 200, 576, 824, 1103, 1340
HapII CCGG 5 cut(s) 974, 994, 1104, 1205, 1337
HgaI GACGC 4 cut(s) 64, 218, 305, 337
HhaI GCGC 3 cut(s) 486, 698, 812
Hin1I GRCGYC 3 cut(s) 56, 210, 297
Hin6I GCGC 3 cut(s) 484, 696, 810
HinP1I GCGC 3 cut(s) 484, 696, 810
HinfI GANTC 6 cut(s) 386, 401, 536, 922, 1049, 1057
HpaII CCGG 5 cut(s) 974, 994, 1104, 1205, 1337
HphI GGTGA 4 cut(s) 421, 578, 1153, 1174
Hpy166II GTNNAC 3 cut(s) 684, 875, 1165
Hpy188I TCNGA 7 cut(s) 54, 106, 164, 841, 884, 927, 1324
Hpy188III TCNNGA 4 cut(s) 149, 398, 1003, 1042
Hpy8I GTNNAC 3 cut(s) 684, 875, 1165
Hpy99I CGWCG 3 cut(s) 58, 212, 479
HpyAV CCTTC 6 cut(s) 223, 280, 991, 1039, 1076, 1115
HpyCH4III ACNGT 1 cut(s) 782
HpyCH4IV ACGT 1 cut(s) 474
HpyCH4V TGCA 3 cut(s) 98, 937, 1093
HpyF10VI GCNNNNNNNGC 3 cut(s) 192, 249, 258
HpyF3I CTNAG 6 cut(s) 528, 553, 731, 758, 1136, 1344
HpySE526I ACGT 1 cut(s) 474
Hsp92I GRCGYC 3 cut(s) 56, 210, 297
HspAI GCGC 3 cut(s) 484, 696, 810
KpnI GGTACC 1 cut(s) 994
KroI GCCGGC 1 cut(s) 1204
KroNI GCCGGC 1 cut(s) 1206
Ksp22I TGATCA 1 cut(s) 82
Kzo9I GATC 5 cut(s) 82, 245, 394, 411, 1330
LmnI GCTCC 4 cut(s) 294, 524, 1009, 1149
Lsp1109I GCAGC 5 cut(s) 82, 104, 167, 1077, 1305
LweI GCATC 1 cut(s) 1077
MaeI CTAG 3 cut(s) 113, 149, 1173
MaeII ACGT 1 cut(s) 474
MaeIII GTNAC 2 cut(s) 427, 712
MalI GATC 5 cut(s) 84, 247, 396, 413, 1332
MbiI CCGCTC 1 cut(s) 1254
MboI GATC 5 cut(s) 82, 245, 394, 411, 1330
MboII GAAGA 9 cut(s) 265, 552, 620, 626, 629, 940, 1066, 1156, 1237
MfeI CAATTG 1 cut(s) 849
MflI RGATCY 2 cut(s) 245, 1330
MlsI TGGCCA 2 cut(s) 65, 576
MluCI AATT 1 cut(s) 849
MluNI TGGCCA 2 cut(s) 65, 576
MlyI GAGTC 4 cut(s) 395, 410, 545, 1058
MmeI TCCRAC 2 cut(s) 77, 687
Mox20I TGGCCA 2 cut(s) 65, 576
MroNI GCCGGC 1 cut(s) 1204
MroXI GAANNNNTTC 1 cut(s) 1061
MscI TGGCCA 2 cut(s) 65, 576
MseI TTAA 2 cut(s) 513, 942
MslI CAYNNNNRTG 2 cut(s) 570, 767
Msp20I TGGCCA 2 cut(s) 65, 576
MspA1I CMGCKG 4 cut(s) 80, 95, 180, 1296
MspI CCGG 5 cut(s) 974, 994, 1104, 1205, 1337
MspR9I CCNGG 2 cut(s) 197, 1105
MunI CAATTG 1 cut(s) 849
MvaI CCWGG 1 cut(s) 197
MvnI CGCG 2 cut(s) 399, 486
MwoI GCNNNNNNNGC 3 cut(s) 192, 249, 258
NaeI GCCGGC 1 cut(s) 1206
NciI CCSGG 1 cut(s) 1105
NcoI CCATGG 1 cut(s) 60
NdeII GATC 5 cut(s) 82, 245, 394, 411, 1330
NgoMIV GCCGGC 1 cut(s) 1204
NlaIV GGNNCC 5 cut(s) 144, 247, 917, 992, 1341
NmuCI GTSAC 2 cut(s) 427, 712
NruI TCGCGA 1 cut(s) 399
NspI RCATGY 1 cut(s) 1097
PcsI WCGNNNNNNNCGW 2 cut(s) 822, 1058
PdiI GCCGGC 1 cut(s) 1206
PdmI GAANNNNTTC 1 cut(s) 1061
PfeI GAWTC 2 cut(s) 922, 1057
PflFI GACNNNGTC 2 cut(s) 281, 780
PleI GAGTC 4 cut(s) 394, 409, 544, 1057
PpsI GAGTC 4 cut(s) 394, 409, 544, 1057
PshBI ATTAAT 1 cut(s) 513
Psp6I CCWGG 1 cut(s) 195
PspGI CCWGG 1 cut(s) 195
PspN4I GGNNCC 5 cut(s) 144, 247, 917, 992, 1341
PspPI GGNCC 2 cut(s) 142, 1339
PstNI CAGNNNCTG 1 cut(s) 95
PsuI RGATCY 2 cut(s) 245, 1330
PsyI GACNNNGTC 2 cut(s) 281, 780
PvuII CAGCTG 2 cut(s) 80, 95
RruI TCGCGA 1 cut(s) 399
RsaI GTAC 4 cut(s) 239, 656, 743, 992
RsaNI GTAC 4 cut(s) 238, 655, 742, 991
RseI CAYNNNNRTG 2 cut(s) 570, 767
SaqAI TTAA 2 cut(s) 513, 942
Sau3AI GATC 5 cut(s) 82, 245, 394, 411, 1330
Sau96I GGNCC 2 cut(s) 142, 1339
ScaI AGTACT 1 cut(s) 239
SchI GAGTC 4 cut(s) 395, 410, 545, 1058
ScrFI CCNGG 2 cut(s) 197, 1105
SfaNI GCATC 1 cut(s) 1077
SinI GGWCC 1 cut(s) 142
SmiMI CAYNNNNRTG 2 cut(s) 570, 767
SmlI CTYRAG 1 cut(s) 1184
SmoI CTYRAG 1 cut(s) 1184
Sse9I AATT 1 cut(s) 849
SspMI CTAG 3 cut(s) 113, 149, 1173
StyD4I CCNGG 2 cut(s) 195, 1103
StyI CCWWGG 1 cut(s) 60
TaaI ACNGT 1 cut(s) 782
TaiI ACGT 1 cut(s) 477
TaqI TCGA 5 cut(s) 276, 816, 954, 1052, 1065
TaqII GACCGA 1 cut(s) 446
TasI AATT 1 cut(s) 849
TatI WGTACW 3 cut(s) 237, 654, 741
TauI GCSGC 5 cut(s) 186, 255, 302, 489, 1257
TfiI GAWTC 2 cut(s) 922, 1057
Tru1I TTAA 2 cut(s) 513, 942
Tru9I TTAA 2 cut(s) 513, 942
TscAI CASTG 1 cut(s) 900
TseFI GTSAC 2 cut(s) 427, 712
TseI GCWGC 5 cut(s) 92, 95, 180, 1090, 1293
Tsp45I GTSAC 2 cut(s) 427, 712
TspDTI ATGAA 4 cut(s) 453, 621, 627, 968
TspGWI ACGGA 3 cut(s) 529, 1022, 1050
TspRI CASTG 1 cut(s) 900
Tth111I GACNNNGTC 2 cut(s) 281, 780
VpaK11BI GGWCC 1 cut(s) 142
VspI ATTAAT 1 cut(s) 513
XbaI TCTAGA 1 cut(s) 148
XceI RCATGY 1 cut(s) 1097
XcmI CCANNNNNNNNNTGG 1 cut(s) 96
XmnI GAANNNNTTC 1 cut(s) 1061
XspI CTAG 3 cut(s) 113, 149, 1173
ZrmI AGTACT 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.