Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0012940

Physical Location & Seq

Genomic Coordinates Reverse (-)

52143782 .. 52145140

Gene Structure 1359 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG368500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGGGTGGCCACCAATCCAAAGCACACAAAACACAGCTTTCAGTCTCTGAACCAAAACCAGCCATGGATACCACCACCCAGACCCAAAGCACTGATTCCACTACTGAACCAGGGCCAGCATGGTCAGCTCTCCTCGGCGAGAACAACTGGGCCGGCCTCCTGGACCCGCTGGACCTTCACCTCCGAACCCTGATCCTCCGGTGCGGCGACTTCTGCCAGGGGACCTACGACGCCTTCAACAACGACGCCAACTCCATGTACGCCGGGTCCAGCCGCTACGGCAAAGCCTCCTTCTTCGACAAAGTGATGCTCCAAGACGCCGCCAACTACGAAATCGCCTCCTTCCTCTACGCCACCGCACTCGTCAGCGTCCCGGAGGCCTTCCTCCTCCACTCCATGTCCCGCGAGTCATGGGACCGCGAGTCCAACTGGATCGGCTACATCGCCGTCACCACCGACGCGTACAGCAAGTCCATCGGCCGCCGCGAAATCTACGTCGCGTGGCGCGGTACCACCCGCAAATACGAGTGGGTTAATGTAATGGGAGCCGAGCTTGAATCCGCAGCGCCGCTGCTCAAACCGGACACAGTAAACAACAAGCTGAAACAAACTAGTGGTGATGGTGGCACTAGTAGCAGTGACAAGGAAGAAGATGATGAAAATGCCAAGGTACCCAAAGTCATGAGAGGCTGGCTGTCCATGTACATCTCCGACGACCCGAAATCGAACTTCACCAAATCCAGCGCCAGAGTTCAGCTGCTGAACAAAATCAACGAGCTGAGGGAGAAGTACAAAGGTGAGAAGCTGAGCATAGCGCTGACCGGGCACAGTCTCGGTGCAAGCCTGGCAGTCGTCAGCGGTTTTGACCTGGTGGAGAACGGAATCTCGGATATTCCGGTGGCGGCTTTCGTGTTCGGGTGTCCGCAAGTCGGGAACAAGGCCTTCAAGACCAGGATAGGCCAGCACCCGAATCTGAAGATTCTGCACATAAGAAACAAGATCGATCTGATTCCACACTACCCGGGAAGGGCTCTGGGGTATCGTTATATAGGGACTGAAGTGTTGATCGACACGAAGAAGTCGCCGTATTTGAAGGACTCGAAGGACGCTGGGGACTGGCACAACTTGCAGGCGATGCTGCATATAGTGGCGGGGTGGAACGGAGAGAAGGGTGAGTTCGAGCTCAAGGTAAAGAGGAGTGTCGCTTTGGTGAACAAGTCGTGTGATTTTCTCAAGACGGAGTGTTCGGTGCCGGCGTTGTGGTGGGTTGAGAAGAACAAAGGGATGGTGCGGGATGAAAATGGAGAATGGGTTCTGGCTCCACCTGCGGATGAGGACCTACCGGTCCCGGAATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008970 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009650 GO:0009987 GO:0010224 GO:0016298 GO:0016787 GO:0016788 GO:0034644 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051716 GO:0052689 GO:0071214 GO:0071478 GO:0071482 GO:0071493 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

452

Amino Acids

50.15

Weight (kDa)

6.11

Isoelectric Point (pI)

37.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipase_3	PF01764	165 - 343	5.7e-28	Lipase (class 3)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012940)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42690
fragaria_vesca	FvH4_6g27580
malus_domestica	MD00G1191600.v1.1 MD11G1004600.v1.1 MD17G1265700.v1.1
prunus_persica	Prupe.3G116300_v2.0.a1
pyrus_communis	pycom09g15480 pycom17g26540
rosa_laevigata	RLG00000019119
rosa_multiflora	Rmu_sc0005625.1_g000015 Rmu_sc0009900.1_g000007
rosa_roxburghii	Rroxscaffold_2G00114140
rosa_rugosa	Rorug02G0291000
rosa_samantha	Rh2AG342400 Rh2BG350300 Rh2CG329500 Rh2DG368500
rosa_wichuraiana	Rw2G027700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1333
AasI	GACNNNNNNGTC	1 cut(s)	1343
Acc36I	ACCTGC	1 cut(s)	1333
Acc65I	GGTACC	2 cut(s)	509, 670
AccB1I	GGYRCC	3 cut(s)	509, 670, 1249
AccII	CGCG	6 cut(s)	405, 420, 461, 486, 500, 507
AclWI	GGATC	2 cut(s)	187, 440
AcoI	YGGCCR	2 cut(s)	7, 478
AcuI	CTGAAG	2 cut(s)	995, 1077
AcyI	GRCGYC	3 cut(s)	231, 246, 318
AfaI	GTAC	6 cut(s)	260, 464, 511, 672, 704, 791
AfeI	AGCGCT	1 cut(s)	816
AfiI	CCNNNNNNNGG	2 cut(s)	929, 1027
AflIII	ACRYGT	1 cut(s)	459
AgeI	ACCGGT	1 cut(s)	1342
AgsI	TTSAA	4 cut(s)	238, 557, 946, 1093
AhdI	GACNNNNNGTC	1 cut(s)	421
AhlI	ACTAGT	2 cut(s)	611, 629
AjnI	CCWGG	6 cut(s)	109, 159, 216, 843, 867, 950
AloI	GAACNNNNNNTCC	2 cut(s)	1296, 1328
AluBI	AGCT	8 cut(s)	37, 128, 553, 601, 757, 778, 805, 1183
AluI	AGCT	8 cut(s)	37, 128, 553, 601, 757, 778, 805, 1183
Alw21I	GWGCWC	1 cut(s)	1185
Alw26I	GTCTC	2 cut(s)	49, 836
AlwI	GGATC	2 cut(s)	187, 440
AlwNI	CAGNNNCTG	2 cut(s)	47, 760
Ama87I	CYCGRG	1 cut(s)	1021
Aor51HI	AGCGCT	1 cut(s)	816
AoxI	GGCC	8 cut(s)	7, 113, 150, 154, 378, 478, 939, 958
ApeKI	GCWGC	4 cut(s)	563, 571, 757, 1138
ArsI	GACNNNNNNTTYG	4 cut(s)	480, 512, 1228, 1260
AsiGI	ACCGGT	1 cut(s)	1342
Asp700I	GAANNNNTTC	1 cut(s)	1311
Asp718I	GGTACC	2 cut(s)	509, 670
AspLEI	GCGC	4 cut(s)	507, 568, 746, 817
AspS9I	GGNCC	9 cut(s)	113, 150, 163, 172, 222, 267, 415, 1336, 1345
AsuC2I	CCSGG	6 cut(s)	265, 374, 823, 1022, 1023, 1349
AsuHPI	GGTGA	7 cut(s)	170, 442, 629, 724, 809, 1184, 1222
AvaI	CYCGRG	1 cut(s)	1021
AvaII	GGWCC	7 cut(s)	163, 172, 222, 267, 415, 1336, 1345
BaeGI	GKGCMC	1 cut(s)	828
BalI	TGGCCA	1 cut(s)	9
BanI	GGYRCC	3 cut(s)	509, 670, 1249
BanII	GRGCYC	2 cut(s)	1033, 1185
Bbv12I	GWGCWC	1 cut(s)	1185
BbvCI	CCTCAGC	1 cut(s)	779
BbvI	GCAGC	4 cut(s)	558, 575, 744, 1125
BccI	CCATC	3 cut(s)	482, 614, 1279
BceAI	ACGGC	3 cut(s)	295, 431, 1069
BcgI	CGANNNNNNTGC	2 cut(s)	457, 491
BciT130I	CCWGG	6 cut(s)	111, 161, 218, 845, 869, 952
BciVI	GTATCC	1 cut(s)	61
BcnI	CCSGG	6 cut(s)	265, 374, 823, 1022, 1023, 1349
BcoDI	GTCTC	2 cut(s)	49, 836
BcuI	ACTAGT	2 cut(s)	611, 629
BfaI	CTAG	2 cut(s)	612, 630
BfoI	RGCGCY	3 cut(s)	569, 747, 818
BfuAI	ACCTGC	1 cut(s)	1333
BfuI	GTATCC	1 cut(s)	61
BglI	GCCNNNNNGGC	1 cut(s)	279
BlpI	GCTNAGC	1 cut(s)	806
Bme18I	GGWCC	7 cut(s)	163, 172, 222, 267, 415, 1336, 1345
BmeRI	GACNNNNNGTC	1 cut(s)	421
BmeT110I	CYCGRG	1 cut(s)	1021
BmgT120I	GGNCC	9 cut(s)	113, 150, 163, 172, 222, 267, 415, 1336, 1345
BmrI	ACTGGG	1 cut(s)	157
BmsI	GCATC	2 cut(s)	297, 1125
BmuI	ACTGGG	1 cut(s)	157
Bpu10I	CCTNAGC	1 cut(s)	779
Bpu1102I	GCTNAGC	1 cut(s)	806
BpuEI	CTTGAG	2 cut(s)	1169, 1217
BpuMI	CCSGG	6 cut(s)	265, 374, 823, 1022, 1023, 1349
Bsa29I	ATCGAT	1 cut(s)	1002
BsaHI	GRCGYC	3 cut(s)	231, 246, 318
BsaJI	CCNNGG	6 cut(s)	63, 110, 133, 217, 666, 1021
BsaWI	WCCGGW	4 cut(s)	198, 580, 895, 1342
BsaXI	ACNNNNNCTCC	4 cut(s)	236, 266, 1296, 1326
Bsc4I	CCNNNNNNNGG	2 cut(s)	929, 1027
Bse118I	RCCGGY	3 cut(s)	152, 1252, 1342
Bse1I	ACTGG	3 cut(s)	152, 434, 1121
BseBI	CCWGG	6 cut(s)	111, 161, 218, 845, 869, 952
BseCI	ATCGAT	1 cut(s)	1002
BseDI	CCNNGG	6 cut(s)	63, 110, 133, 217, 666, 1021
BseGI	GGATG	3 cut(s)	1290, 1300, 1336
BseLI	CCNNNNNNNGG	2 cut(s)	929, 1027
BseMII	CTCAG	2 cut(s)	770, 797
BseNI	ACTGG	3 cut(s)	152, 434, 1121
BseRI	GAGGAG	3 cut(s)	122, 377, 1210
BseSI	GKGCMC	1 cut(s)	828
BseX3I	CGGCCG	1 cut(s)	478
BseXI	GCAGC	4 cut(s)	558, 575, 744, 1125
BseYI	CCCAGC	1 cut(s)	1109
BsgI	GTGCAG	1 cut(s)	968
Bsh1236I	CGCG	6 cut(s)	405, 420, 461, 486, 500, 507
Bsh1285I	CGRYCG	1 cut(s)	481
BshFI	GGCC	8 cut(s)	9, 115, 152, 156, 380, 480, 941, 960
BshNI	GGYRCC	3 cut(s)	509, 670, 1249
BshTI	ACCGGT	1 cut(s)	1342
BshVI	ATCGAT	1 cut(s)	1002
BsiEI	CGRYCG	1 cut(s)	481
BsiHKAI	GWGCWC	1 cut(s)	1185
BsiHKCI	CYCGRG	1 cut(s)	1021
BslFI	GGGAC	7 cut(s)	235, 356, 385, 428, 1066, 1127, 1331
BslI	CCNNNNNNNGG	2 cut(s)	929, 1027
BsmAI	GTCTC	2 cut(s)	49, 836
BsmFI	GGGAC	7 cut(s)	235, 356, 385, 428, 1066, 1127, 1331
BsnI	GGCC	8 cut(s)	9, 115, 152, 156, 380, 480, 941, 960
BsoBI	CYCGRG	1 cut(s)	1021
Bsp1286I	GDGCHC	3 cut(s)	828, 1033, 1185
Bsp1407I	TGTACA	1 cut(s)	702
Bsp143I	GATC	5 cut(s)	192, 432, 999, 1003, 1065
Bsp1720I	GCTNAGC	1 cut(s)	806
Bsp19I	CCATGG	1 cut(s)	63
BspANI	GGCC	8 cut(s)	9, 115, 152, 156, 380, 480, 941, 960
BspCNI	CTCAG	2 cut(s)	771, 798
BspDI	ATCGAT	1 cut(s)	1002
BspFNI	CGCG	6 cut(s)	405, 420, 461, 486, 500, 507
BspHI	TCATGA	1 cut(s)	681
BspMI	ACCTGC	1 cut(s)	1333
BspPI	GGATC	2 cut(s)	187, 440
BspT107I	GGYRCC	3 cut(s)	509, 670, 1249
BsrFI	RCCGGY	3 cut(s)	152, 1252, 1342
BsrGI	TGTACA	1 cut(s)	702
BsrI	ACTGG	3 cut(s)	152, 434, 1121
BssAI	RCCGGY	3 cut(s)	152, 1252, 1342
BssECI	CCNNGG	6 cut(s)	63, 110, 133, 217, 666, 1021
BssMI	GATC	5 cut(s)	192, 432, 999, 1003, 1065
BssNI	GRCGYC	3 cut(s)	231, 246, 318
BssT1I	CCWWGG	2 cut(s)	63, 666
Bst2UI	CCWGG	6 cut(s)	111, 161, 218, 845, 869, 952
Bst4CI	ACNGT	2 cut(s)	589, 830
BstACI	GRCGYC	3 cut(s)	231, 246, 318
BstAPI	GCANNNNNTGC	2 cut(s)	1126, 1135
BstAUI	TGTACA	1 cut(s)	702
BstC8I	GCNNGC	7 cut(s)	117, 154, 692, 841, 962, 1131, 1254
BstDEI	CTNAG	2 cut(s)	779, 806
BstDSI	CCRYGG	1 cut(s)	63
BstF5I	GGATG	3 cut(s)	1290, 1300, 1336
BstFNI	CGCG	6 cut(s)	405, 420, 461, 486, 500, 507
BstH2I	RGCGCY	3 cut(s)	569, 747, 818
BstHHI	GCGC	4 cut(s)	507, 568, 746, 817
BstKTI	GATC	5 cut(s)	195, 435, 1002, 1006, 1068
BstMAI	GTCTC	2 cut(s)	49, 836
BstMBI	GATC	5 cut(s)	192, 432, 999, 1003, 1065
BstMCI	CGRYCG	1 cut(s)	481
BstMWI	GCNNNNNNNGC	9 cut(s)	125, 213, 279, 633, 823, 845, 1126, 1135, 1325
BstNI	CCWGG	6 cut(s)	111, 161, 218, 845, 869, 952
BstSLI	GKGCMC	1 cut(s)	828
BstUI	CGCG	6 cut(s)	405, 420, 461, 486, 500, 507
BstV1I	GCAGC	4 cut(s)	558, 575, 744, 1125
BstZI	CGGCCG	1 cut(s)	478
Bsu15I	ATCGAT	1 cut(s)	1002
BsuI	GTATCC	1 cut(s)	61
BsuRI	GGCC	8 cut(s)	9, 115, 152, 156, 380, 480, 941, 960
BsuTUI	ATCGAT	1 cut(s)	1002
BtgI	CCRYGG	1 cut(s)	63
BtgZI	GCGATG	2 cut(s)	427, 1148
BtsCI	GGATG	3 cut(s)	1290, 1300, 1336
BtsI	GCAGTG	1 cut(s)	643
BtsIMutI	CAGTG	2 cut(s)	90, 643
BveI	ACCTGC	1 cut(s)	1333
Cac8I	GCNNGC	7 cut(s)	117, 154, 692, 841, 962, 1131, 1254
CaiI	CAGNNNCTG	2 cut(s)	47, 760
CciI	TCATGA	1 cut(s)	681
CfoI	GCGC	4 cut(s)	507, 568, 746, 817
Cfr10I	RCCGGY	3 cut(s)	152, 1252, 1342
Cfr13I	GGNCC	9 cut(s)	113, 150, 163, 172, 222, 267, 415, 1336, 1345
Cfr9I	CCCGGG	1 cut(s)	1021
ClaI	ATCGAT	1 cut(s)	1002
CseI	GACGC	6 cut(s)	239, 254, 326, 358, 467, 1115
CsiI	ACCWGGT	1 cut(s)	867
Csp6I	GTAC	6 cut(s)	259, 463, 510, 671, 703, 790
CspAI	ACCGGT	1 cut(s)	1342
CviAII	CATG	7 cut(s)	64, 120, 256, 397, 411, 682, 700
CviQI	GTAC	6 cut(s)	259, 463, 510, 671, 703, 790
DdeI	CTNAG	2 cut(s)	779, 806
DpnI	GATC	5 cut(s)	194, 434, 1001, 1005, 1067
DpnII	GATC	5 cut(s)	192, 432, 999, 1003, 1065
DrdI	GACNNNNNNGTC	1 cut(s)	1343
DriI	GACNNNNNGTC	1 cut(s)	421
DseDI	GACNNNNNNGTC	1 cut(s)	1343
EaeI	YGGCCR	2 cut(s)	7, 478
EagI	CGGCCG	1 cut(s)	478
Eam1105I	GACNNNNNGTC	1 cut(s)	421
Ecl136II	GAGCTC	1 cut(s)	1183
EclXI	CGGCCG	1 cut(s)	478
Eco130I	CCWWGG	2 cut(s)	63, 666
Eco147I	AGGCCT	2 cut(s)	380, 941
Eco24I	GRGCYC	2 cut(s)	1033, 1185
Eco47I	GGWCC	7 cut(s)	163, 172, 222, 267, 415, 1336, 1345
Eco47III	AGCGCT	1 cut(s)	816
Eco52I	CGGCCG	1 cut(s)	478
Eco53kI	GAGCTC	1 cut(s)	1183
Eco57I	CTGAAG	2 cut(s)	995, 1077
Eco88I	CYCGRG	1 cut(s)	1021
EcoICRI	GAGCTC	1 cut(s)	1183
EcoO109I	RGGNCCY	2 cut(s)	222, 1336
EcoRII	CCWGG	6 cut(s)	109, 159, 216, 843, 867, 950
EcoT14I	CCWWGG	2 cut(s)	63, 666
EcoT38I	GRGCYC	2 cut(s)	1033, 1185
ErhI	CCWWGG	2 cut(s)	63, 666
FaeI	CATG	7 cut(s)	67, 123, 259, 400, 414, 685, 703
FaqI	GGGAC	7 cut(s)	235, 356, 385, 428, 1066, 1127, 1331
FatI	CATG	7 cut(s)	63, 119, 255, 396, 410, 681, 699
FauI	CCCGC	5 cut(s)	174, 410, 524, 1144, 1284
FokI	GGATG	3 cut(s)	1297, 1307, 1343
FriOI	GRGCYC	2 cut(s)	1033, 1185
FseI	GGCCGGCC	1 cut(s)	156
FspBI	CTAG	2 cut(s)	612, 630
GlaI	GCGC	4 cut(s)	506, 567, 745, 816
GsaI	CCCAGC	1 cut(s)	1113
HaeII	RGCGCY	3 cut(s)	569, 747, 818
HaeIII	GGCC	8 cut(s)	9, 115, 152, 156, 380, 480, 941, 960
HgaI	GACGC	6 cut(s)	239, 254, 326, 358, 467, 1115
HhaI	GCGC	4 cut(s)	507, 568, 746, 817
Hin1I	GRCGYC	3 cut(s)	231, 246, 318
Hin1II	CATG	7 cut(s)	67, 123, 259, 400, 414, 685, 703
Hin6I	GCGC	4 cut(s)	505, 566, 744, 815
HinP1I	GCGC	4 cut(s)	505, 566, 744, 815
HinfI	GANTC	9 cut(s)	95, 407, 422, 557, 882, 970, 979, 1009, 1097
HphI	GGTGA	7 cut(s)	170, 442, 629, 724, 809, 1184, 1222
Hpy166II	GTNNAC	2 cut(s)	592, 1213
Hpy188I	TCNGA	6 cut(s)	49, 185, 712, 889, 975, 1008
Hpy188III	TCNNGA	4 cut(s)	682, 931, 946, 1234
Hpy8I	GTNNAC	2 cut(s)	592, 1213
Hpy99I	CGWCG	5 cut(s)	233, 248, 461, 500, 716
HpyCH4III	ACNGT	2 cut(s)	589, 830
HpyCH4IV	ACGT	1 cut(s)	495
HpyCH4V	TGCA	4 cut(s)	839, 985, 1129, 1141
HpyF10VI	GCNNNNNNNGC	9 cut(s)	125, 213, 279, 633, 823, 845, 1126, 1135, 1325
HpyF3I	CTNAG	2 cut(s)	779, 806
HpySE526I	ACGT	1 cut(s)	495
Hsp92I	GRCGYC	3 cut(s)	231, 246, 318
Hsp92II	CATG	7 cut(s)	67, 123, 259, 400, 414, 685, 703
HspAI	GCGC	4 cut(s)	505, 566, 744, 815
KpnI	GGTACC	2 cut(s)	513, 674
KroI	GCCGGC	2 cut(s)	152, 1252
KroNI	GCCGGC	2 cut(s)	154, 1254
Kzo9I	GATC	5 cut(s)	192, 432, 999, 1003, 1065
LmnI	GCTCC	3 cut(s)	315, 545, 1324
Lsp1109I	GCAGC	4 cut(s)	558, 575, 744, 1125
LweI	GCATC	2 cut(s)	297, 1125
MabI	ACCWGGT	1 cut(s)	867
MaeI	CTAG	2 cut(s)	612, 630
MaeII	ACGT	1 cut(s)	495
MaeIII	GTNAC	2 cut(s)	448, 638
MalI	GATC	5 cut(s)	194, 434, 1001, 1005, 1067
MboI	GATC	5 cut(s)	192, 432, 999, 1003, 1065
MboII	GAAGA	6 cut(s)	286, 659, 662, 988, 1087, 1285
MhlI	GDGCHC	3 cut(s)	828, 1033, 1185
MlsI	TGGCCA	1 cut(s)	9
MluI	ACGCGT	1 cut(s)	459
MluNI	TGGCCA	1 cut(s)	9
MlyI	GAGTC	3 cut(s)	416, 431, 1091
MmeI	TCCRAC	2 cut(s)	450, 735
Mox20I	TGGCCA	1 cut(s)	9
MroNI	GCCGGC	2 cut(s)	152, 1252
MroXI	GAANNNNTTC	1 cut(s)	1311
MscI	TGGCCA	1 cut(s)	9
MseI	TTAA	1 cut(s)	534
Msp20I	TGGCCA	1 cut(s)	9
MspA1I	CMGCKG	4 cut(s)	169, 571, 757, 858
MvaI	CCWGG	6 cut(s)	111, 161, 218, 845, 869, 952
MvnI	CGCG	6 cut(s)	405, 420, 461, 486, 500, 507
MwoI	GCNNNNNNNGC	9 cut(s)	125, 213, 279, 633, 823, 845, 1126, 1135, 1325
NaeI	GCCGGC	2 cut(s)	154, 1254
NciI	CCSGG	6 cut(s)	265, 374, 823, 1022, 1023, 1349
NcoI	CCATGG	1 cut(s)	63
NdeII	GATC	5 cut(s)	192, 432, 999, 1003, 1065
NgoMIV	GCCGGC	2 cut(s)	152, 1252
NlaIII	CATG	7 cut(s)	67, 123, 259, 400, 414, 685, 703
NmeAIII	GCCGAG	2 cut(s)	114, 574
NmuCI	GTSAC	2 cut(s)	448, 638
PagI	TCATGA	1 cut(s)	681
PaqCI	CACCTGC	1 cut(s)	1333
PceI	AGGCCT	2 cut(s)	380, 941
PcsI	WCGNNNNNNNCGW	2 cut(s)	483, 1253
PdiI	GCCGGC	2 cut(s)	154, 1254
PdmI	GAANNNNTTC	1 cut(s)	1311
PfeI	GAWTC	6 cut(s)	95, 557, 882, 970, 979, 1009
PfoI	TCCNGGA	3 cut(s)	159, 372, 1347
PinAI	ACCGGT	1 cut(s)	1342
PleI	GAGTC	3 cut(s)	415, 430, 1091
PpsI	GAGTC	3 cut(s)	415, 430, 1091
PpuMI	RGGWCCY	2 cut(s)	222, 1336
Psp124BI	GAGCTC	1 cut(s)	1185
Psp5II	RGGWCCY	2 cut(s)	222, 1336
Psp6I	CCWGG	6 cut(s)	109, 159, 216, 843, 867, 950
PspFI	CCCAGC	1 cut(s)	1109
PspGI	CCWGG	6 cut(s)	109, 159, 216, 843, 867, 950
PspPI	GGNCC	9 cut(s)	113, 150, 163, 172, 222, 267, 415, 1336, 1345
PspPPI	RGGWCCY	2 cut(s)	222, 1336
PstNI	CAGNNNCTG	2 cut(s)	47, 760
PvuII	CAGCTG	1 cut(s)	757
RigI	GGCCGGCC	1 cut(s)	156
RsaI	GTAC	6 cut(s)	260, 464, 511, 672, 704, 791
RsaNI	GTAC	6 cut(s)	259, 463, 510, 671, 703, 790
SacI	GAGCTC	1 cut(s)	1185
SaqAI	TTAA	1 cut(s)	534
Sau3AI	GATC	5 cut(s)	192, 432, 999, 1003, 1065
Sau96I	GGNCC	9 cut(s)	113, 150, 163, 172, 222, 267, 415, 1336, 1345
SchI	GAGTC	3 cut(s)	416, 431, 1091
SduI	GDGCHC	3 cut(s)	828, 1033, 1185
SexAI	ACCWGGT	1 cut(s)	867
SfaNI	GCATC	2 cut(s)	297, 1125
SinI	GGWCC	7 cut(s)	163, 172, 222, 267, 415, 1336, 1345
SmaI	CCCGGG	1 cut(s)	1023
SmlI	CTYRAG	2 cut(s)	1184, 1232
SmoI	CTYRAG	2 cut(s)	1184, 1232
SpeI	ACTAGT	2 cut(s)	611, 629
SseBI	AGGCCT	2 cut(s)	380, 941
SspI	AATATT	1 cut(s)	1355
SspMI	CTAG	2 cut(s)	612, 630
SstI	GAGCTC	1 cut(s)	1185
StuI	AGGCCT	2 cut(s)	380, 941
StyI	CCWWGG	2 cut(s)	63, 666
TaaI	ACNGT	2 cut(s)	589, 830
TaiI	ACGT	1 cut(s)	498
TaqI	TCGA	6 cut(s)	297, 725, 1002, 1068, 1100, 1179
TatI	WGTACW	2 cut(s)	702, 789
TauI	GCSGC	7 cut(s)	207, 276, 323, 483, 486, 571, 905
TfiI	GAWTC	6 cut(s)	95, 557, 882, 970, 979, 1009
Tru1I	TTAA	1 cut(s)	534
Tru9I	TTAA	1 cut(s)	534
TscAI	CASTG	2 cut(s)	97, 643
TseFI	GTSAC	2 cut(s)	448, 638
TseI	GCWGC	4 cut(s)	563, 571, 757, 1138
Tsp45I	GTSAC	2 cut(s)	448, 638
TspDTI	ATGAA	2 cut(s)	672, 1311
TspGWI	ACGGA	3 cut(s)	894, 1176, 1253
TspMI	CCCGGG	1 cut(s)	1021
TspRI	CASTG	2 cut(s)	97, 643
VpaK11BI	GGWCC	7 cut(s)	163, 172, 222, 267, 415, 1336, 1345
XcmI	CCANNNNNNNNNTGG	1 cut(s)	117
XmaI	CCCGGG	1 cut(s)	1021
XmnI	GAANNNNTTC	1 cut(s)	1311
XspI	CTAG	2 cut(s)	612, 630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.