Prupe.1G010600_v2.0.a1

F-box LRR-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
811526 .. 814007
2482 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G010600.1

Sequence Viewer

Length: 1182 bp
ATGATGTTTGGGTATTTAGGTTTTTGTGCAGAGAAGCTTTGTCTATTTTGCTCAAGAGTACGAGCATTAATTCCACCTTTTTTGTCTTCTCTCTTTTCTTGGAACTCCAATAGCCAAAAATACCTAACCCACCTTCAGAAGCTTGACCAGATTGATCAACCAAGATGGGAGGACTTACCTCTGGACTGTTTGGTGAATGTGTTTGGAAGAGTTGGTATGAGGTCGTTGCTCTTAAATGTTCCTTTTGTGTGCAAGTCATGGCACAGGGCGAGCCTCGACCCTTCATGCTGGCAACGTCTCATTTTTATTGACACTGAAACTGAGATGGACCTTGAAACTCGTCAATTTTGGTGTTGTGATAATGAAATTGAAGCTGATATTGACATTGAATCTGATCGTCGCTGTTTTGAGGCATTGATGAATAGATTTGCATGTCAATATCGTATGGATGATACCTGTTTTTCTGACACTGGATTTATACAGTTCGTAGTCAATCGTAGCAAAGGACATGCAACTTTCCTGAGGCTACCTGGAGTCTGTCCGGAAGCTGCAATGAAATATGTTGGGAATGTGTGTCATGGACTCAAGGGTTTGTCTTTGCCCAGACGTTTACTGCTCTGTTCACCAAGCATCGTTGCAGAACTGATTGGTAAGTGCAAACATTTGGAGTTGTTGTCAGTTGGGGGCAGCCATAATTTCGAGGAGATCCTTTTACAATTCAGCATGGGCTGCTGCAAGAATTTTCTCAACATGGATGTGCCAGCTGCTTTAAGGAATAGGGAAGATAATAAGAATGTTCCTGATATTATTCCAAATGTTAGCTTCTTATGCAGCTATAATTTTGAGGAAATCTTTTCACAGATCCGCATTCACTGCAAGAATTTTTGTGGTTTAAATGTGTCGGGTGCTTTAATGAGAAGAGAAGATGTGTTGGCAATTGTCAACTTGCTTCCTCATATTAAGTACTTAATCTTGAGGAAGTCATTCATTGATCGGGATGATCTTGCCACATTACTTCAAGGCTGCGAAGAACTTGTGCTTTTGGATGCAAGGAATTGCTGTGGTTTTGATGAAGGTGATGCTGAAATATCAGTGCTTGCTTCTCATATTGGTAAATTCAGCTGTGAGGGTTCTAGATATGTTGACCCTCTTCTGTGGTTGCGTAGTCACAAATATATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

394

Amino Acids

44.98

Weight (kDa)

5.96

Isoelectric Point (pI)

49.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024588)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 541
AciI CCGC 1 cut(s) 865
AclWI GGATC 2 cut(s) 700, 856
AcsI RAATTY 3 cut(s) 739, 880, 1115
AcuI CTGAAG 1 cut(s) 119
AfaI GTAC 2 cut(s) 60, 965
AgsI TTSAA 4 cut(s) 335, 371, 389, 1019
AjnI CCWGG 1 cut(s) 529
AluBI AGCT 8 cut(s) 37, 142, 374, 548, 764, 822, 834, 1122
AluI AGCT 8 cut(s) 37, 142, 374, 548, 764, 822, 834, 1122
Alw26I GTCTC 1 cut(s) 302
AlwI GGATC 2 cut(s) 700, 856
Aor13HI TCCGGA 1 cut(s) 541
ApeKI GCWGC 7 cut(s) 548, 687, 729, 732, 764, 831, 1023
ApoI RAATTY 3 cut(s) 739, 880, 1115
AseI ATTAAT 1 cut(s) 68
Asp700I GAANNNNTTC 1 cut(s) 983
AspS9I GGNCC 1 cut(s) 328
AsuHPI GGTGA 3 cut(s) 205, 615, 1088
AvaII GGWCC 1 cut(s) 328
AxyI CCTNAGG 1 cut(s) 521
BbsI GAAGAC 1 cut(s) 78
BbvI GCAGC 7 cut(s) 535, 699, 716, 719, 751, 843, 1010
BccI CCATC 2 cut(s) 159, 319
BciT130I CCWGG 1 cut(s) 531
BclI TGATCA 1 cut(s) 154
BcoDI GTCTC 1 cut(s) 302
BfaI CTAG 1 cut(s) 1134
BisI GCNGC 7 cut(s) 549, 688, 730, 733, 765, 832, 1024
BlsI GCNGC 7 cut(s) 550, 689, 731, 734, 766, 833, 1025
BmcAI AGTACT 1 cut(s) 965
Bme1390I CCNGG 1 cut(s) 531
Bme18I GGWCC 1 cut(s) 328
BmgT120I GGNCC 1 cut(s) 328
BmrFI CCNGG 1 cut(s) 531
BmsI GCATC 3 cut(s) 639, 1036, 1069
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 1 cut(s) 552
BpuEI CTTGAG 3 cut(s) 37, 569, 994
BsaWI WCCGGW 1 cut(s) 541
BsaXI ACNNNNNCTCC 2 cut(s) 659, 689
Bse1I ACTGG 1 cut(s) 475
Bse21I CCTNAGG 1 cut(s) 521
Bse3DI GCAATG 1 cut(s) 558
BseAI TCCGGA 1 cut(s) 541
BseBI CCWGG 1 cut(s) 531
BseGI GGATG 4 cut(s) 454, 760, 1003, 1051
BseMI GCAATG 1 cut(s) 558
BseMII CTCAG 2 cut(s) 312, 512
BseNI ACTGG 1 cut(s) 475
BseRI GAGGAG 1 cut(s) 716
BseXI GCAGC 7 cut(s) 535, 699, 716, 719, 751, 843, 1010
BsgI GTGCAG 1 cut(s) 48
BsiSI CCGG 1 cut(s) 542
BsmAI GTCTC 1 cut(s) 302
BsmBI CGTCTC 1 cut(s) 302
BsmI GAATGC 1 cut(s) 867
Bsp13I TCCGGA 1 cut(s) 541
Bsp143I GATC 6 cut(s) 154, 394, 705, 861, 991, 1000
BspACI CCGC 1 cut(s) 865
BspCNI CTCAG 2 cut(s) 313, 513
BspEI TCCGGA 1 cut(s) 541
BspPI GGATC 2 cut(s) 700, 856
BsrDI GCAATG 1 cut(s) 558
BsrI ACTGG 1 cut(s) 475
BssMI GATC 6 cut(s) 154, 394, 705, 861, 991, 1000
Bst2UI CCWGG 1 cut(s) 531
Bst4CI ACNGT 2 cut(s) 188, 483
Bst6I CTCTTC 3 cut(s) 202, 913, 1155
BstAPI GCANNNNNTGC 2 cut(s) 729, 873
BstC8I GCNNGC 4 cut(s) 271, 290, 762, 1098
BstDEI CTNAG 2 cut(s) 321, 521
BstF5I GGATG 4 cut(s) 454, 760, 1003, 1051
BstKTI GATC 6 cut(s) 157, 397, 708, 864, 994, 1003
BstMAI GTCTC 1 cut(s) 302
BstMBI GATC 6 cut(s) 154, 394, 705, 861, 991, 1000
BstMWI GCNNNNNNNGC 3 cut(s) 729, 828, 873
BstNI CCWGG 1 cut(s) 531
BstNSI RCATGY 2 cut(s) 435, 512
BstSCI CCNGG 1 cut(s) 529
BstV1I GCAGC 7 cut(s) 535, 699, 716, 719, 751, 843, 1010
BstV2I GAAGAC 1 cut(s) 78
BstX2I RGATCY 2 cut(s) 705, 861
BstYI RGATCY 2 cut(s) 705, 861
Bsu36I CCTNAGG 1 cut(s) 521
BtsCI GGATG 4 cut(s) 454, 760, 1003, 1051
BtsI GCAGTG 1 cut(s) 871
BtsIMutI CAGTG 4 cut(s) 312, 468, 871, 1098
Cac8I GCNNGC 4 cut(s) 271, 290, 762, 1098
Cfr13I GGNCC 1 cut(s) 328
Csp6I GTAC 2 cut(s) 59, 964
CspCI CAANNNNNGTGG 2 cut(s) 63, 98
CviAII CATG 7 cut(s) 258, 285, 432, 509, 578, 724, 751
CviQI GTAC 2 cut(s) 59, 964
DdeI CTNAG 2 cut(s) 321, 521
DpnI GATC 6 cut(s) 156, 396, 707, 863, 993, 1002
DpnII GATC 6 cut(s) 154, 394, 705, 861, 991, 1000
DraI TTTAAA 1 cut(s) 894
Eam1104I CTCTTC 3 cut(s) 202, 913, 1155
EarI CTCTTC 3 cut(s) 202, 913, 1155
Eco47I GGWCC 1 cut(s) 328
Eco57I CTGAAG 1 cut(s) 119
Eco81I CCTNAGG 1 cut(s) 521
EcoRII CCWGG 1 cut(s) 529
Esp3I CGTCTC 1 cut(s) 302
FaeI CATG 7 cut(s) 261, 288, 435, 512, 581, 727, 754
FatI CATG 7 cut(s) 257, 284, 431, 508, 577, 723, 750
FbaI TGATCA 1 cut(s) 154
Fnu4HI GCNGC 7 cut(s) 549, 688, 730, 733, 765, 832, 1024
FokI GGATG 4 cut(s) 461, 767, 1010, 1058
Fsp4HI GCNGC 7 cut(s) 549, 688, 730, 733, 765, 832, 1024
FspBI CTAG 1 cut(s) 1134
GluI GCNGC 7 cut(s) 549, 688, 730, 733, 765, 832, 1024
GsuI CTGGAG 1 cut(s) 552
HapII CCGG 1 cut(s) 542
Hin1II CATG 7 cut(s) 261, 288, 435, 512, 581, 727, 754
HincII GTYRAC 2 cut(s) 943, 1144
HindII GTYRAC 2 cut(s) 943, 1144
HindIII AAGCTT 2 cut(s) 35, 140
HinfI GANTC 3 cut(s) 389, 534, 582
HpaII CCGG 1 cut(s) 542
HphI GGTGA 3 cut(s) 205, 615, 1088
Hpy166II GTNNAC 4 cut(s) 611, 623, 943, 1144
Hpy188I TCNGA 3 cut(s) 138, 394, 466
Hpy188III TCNNGA 8 cut(s) 54, 182, 520, 542, 800, 973, 995, 1134
Hpy8I GTNNAC 4 cut(s) 611, 623, 943, 1144
Hpy99I CGWCG 1 cut(s) 402
HpyAV CCTTC 3 cut(s) 143, 291, 1067
HpyCH4III ACNGT 2 cut(s) 188, 483
HpyCH4IV ACGT 2 cut(s) 295, 607
HpyF10VI GCNNNNNNNGC 3 cut(s) 729, 828, 873
HpyF3I CTNAG 2 cut(s) 321, 521
HpySE526I ACGT 2 cut(s) 295, 607
Hsp92II CATG 7 cut(s) 261, 288, 435, 512, 581, 727, 754
Kpn2I TCCGGA 1 cut(s) 541
Ksp22I TGATCA 1 cut(s) 154
Kzo9I GATC 6 cut(s) 154, 394, 705, 861, 991, 1000
Lsp1109I GCAGC 7 cut(s) 535, 699, 716, 719, 751, 843, 1010
LweI GCATC 3 cut(s) 639, 1036, 1069
MaeI CTAG 1 cut(s) 1134
MaeII ACGT 2 cut(s) 295, 607
MaeIII GTNAC 1 cut(s) 1166
MalI GATC 6 cut(s) 156, 396, 707, 863, 993, 1002
MboI GATC 6 cut(s) 154, 394, 705, 861, 991, 1000
MboII GAAGA 7 cut(s) 78, 219, 794, 930, 935, 1040, 1142
MfeI CAATTG 1 cut(s) 936
MflI RGATCY 2 cut(s) 705, 861
MlyI GAGTC 2 cut(s) 543, 576
MroI TCCGGA 1 cut(s) 541
MroXI GAANNNNTTC 1 cut(s) 983
MseI TTAA 7 cut(s) 68, 233, 770, 893, 911, 960, 968
MslI CAYNNNNRTG 1 cut(s) 755
MspA1I CMGCKG 2 cut(s) 764, 1122
MspI CCGG 1 cut(s) 542
MspR9I CCNGG 1 cut(s) 531
MunI CAATTG 1 cut(s) 936
Mva1269I GAATGC 1 cut(s) 867
MvaI CCWGG 1 cut(s) 531
MwoI GCNNNNNNNGC 3 cut(s) 729, 828, 873
NdeII GATC 6 cut(s) 154, 394, 705, 861, 991, 1000
NlaIII CATG 7 cut(s) 261, 288, 435, 512, 581, 727, 754
NmuCI GTSAC 1 cut(s) 1166
NspI RCATGY 2 cut(s) 435, 512
PctI GAATGC 1 cut(s) 867
PdmI GAANNNNTTC 1 cut(s) 983
PfeI GAWTC 1 cut(s) 389
PkrI GCNGC 7 cut(s) 550, 689, 731, 734, 766, 833, 1025
PleI GAGTC 2 cut(s) 542, 576
PpsI GAGTC 2 cut(s) 542, 576
PshBI ATTAAT 1 cut(s) 68
Psp6I CCWGG 1 cut(s) 529
PspGI CCWGG 1 cut(s) 529
PspPI GGNCC 1 cut(s) 328
PsuI RGATCY 2 cut(s) 705, 861
PvuII CAGCTG 2 cut(s) 764, 1122
RsaI GTAC 2 cut(s) 60, 965
RsaNI GTAC 2 cut(s) 59, 964
RseI CAYNNNNRTG 1 cut(s) 755
SaqAI TTAA 7 cut(s) 68, 233, 770, 893, 911, 960, 968
SatI GCNGC 7 cut(s) 549, 688, 730, 733, 765, 832, 1024
Sau3AI GATC 6 cut(s) 154, 394, 705, 861, 991, 1000
Sau96I GGNCC 1 cut(s) 328
ScaI AGTACT 1 cut(s) 965
SchI GAGTC 2 cut(s) 543, 576
ScrFI CCNGG 1 cut(s) 531
SfaNI GCATC 3 cut(s) 639, 1036, 1069
SinI GGWCC 1 cut(s) 328
SmiMI CAYNNNNRTG 1 cut(s) 755
SmlI CTYRAG 3 cut(s) 52, 584, 973
SmoI CTYRAG 3 cut(s) 52, 584, 973
SsiI CCGC 1 cut(s) 865
SspMI CTAG 1 cut(s) 1134
StyD4I CCNGG 1 cut(s) 529
TaaI ACNGT 2 cut(s) 188, 483
TaiI ACGT 2 cut(s) 298, 610
TaqI TCGA 2 cut(s) 276, 699
TatI WGTACW 1 cut(s) 963
TfiI GAWTC 1 cut(s) 389
Tru1I TTAA 7 cut(s) 68, 233, 770, 893, 911, 960, 968
Tru9I TTAA 7 cut(s) 68, 233, 770, 893, 911, 960, 968
TscAI CASTG 4 cut(s) 319, 475, 878, 1098
TseFI GTSAC 1 cut(s) 1166
TseI GCWGC 7 cut(s) 548, 687, 729, 732, 764, 831, 1023
Tsp45I GTSAC 1 cut(s) 1166
TspDTI ATGAA 6 cut(s) 273, 378, 434, 569, 976, 1086
TspRI CASTG 4 cut(s) 319, 475, 878, 1098
VpaK11BI GGWCC 1 cut(s) 328
VspI ATTAAT 1 cut(s) 68
XapI RAATTY 3 cut(s) 739, 880, 1115
XbaI TCTAGA 1 cut(s) 1133
XceI RCATGY 2 cut(s) 435, 512
XmnI GAANNNNTTC 1 cut(s) 983
XspI CTAG 1 cut(s) 1134
ZrmI AGTACT 1 cut(s) 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.