Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1075600.v1.1 |
| prunus_persica | Prupe.1G189500_v2.0.a1 |
| pyrus_communis | pycom14g06420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 771, 1779 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 376 |
| AciI | CCGC | 2 cut(s) | 56, 1161 |
| AclWI | GGATC | 3 cut(s) | 655, 1504, 2092 |
| AcsI | RAATTY | 5 cut(s) | 78, 400, 1604, 2052, 2153 |
| AcuI | CTGAAG | 1 cut(s) | 1553 |
| AdeI | CACNNNGTG | 1 cut(s) | 338 |
| AfaI | GTAC | 7 cut(s) | 46, 276, 816, 1253, 1586, 1850, 2023 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 376, 1909, 2002 |
| AflII | CTTAAG | 1 cut(s) | 1934 |
| AflIII | ACRYGT | 1 cut(s) | 1845 |
| AjiI | CACGTC | 1 cut(s) | 1641 |
| AjnI | CCWGG | 2 cut(s) | 246, 653 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 468, 500 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1994, 2026 |
| AluBI | AGCT | 8 cut(s) | 146, 186, 583, 643, 1414, 1624, 2164, 2183 |
| AluI | AGCT | 8 cut(s) | 146, 186, 583, 643, 1414, 1624, 2164, 2183 |
| Alw21I | GWGCWC | 1 cut(s) | 830 |
| AlwI | GGATC | 3 cut(s) | 655, 1504, 2092 |
| AoxI | GGCC | 5 cut(s) | 214, 389, 1165, 1445, 1900 |
| ApaI | GGGCCC | 1 cut(s) | 393 |
| ApeKI | GCWGC | 4 cut(s) | 1151, 1230, 1681, 1689 |
| ApoI | RAATTY | 5 cut(s) | 78, 400, 1604, 2052, 2153 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1092 |
| AspS9I | GGNCC | 4 cut(s) | 389, 390, 1445, 1887 |
| AsuC2I | CCSGG | 1 cut(s) | 279 |
| AsuHPI | GGTGA | 3 cut(s) | 18, 70, 977 |
| AvaII | GGWCC | 1 cut(s) | 1887 |
| BaeGI | GKGCMC | 1 cut(s) | 393 |
| BanII | GRGCYC | 1 cut(s) | 393 |
| BauI | CACGAG | 1 cut(s) | 1280 |
| BbsI | GAAGAC | 1 cut(s) | 1061 |
| Bbv12I | GWGCWC | 1 cut(s) | 830 |
| BbvI | GCAGC | 4 cut(s) | 1138, 1217, 1668, 1701 |
| BccI | CCATC | 5 cut(s) | 475, 905, 1000, 1318, 1816 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2097, 2131 |
| BciT130I | CCWGG | 2 cut(s) | 248, 655 |
| BcnI | CCSGG | 1 cut(s) | 279 |
| BfaI | CTAG | 6 cut(s) | 183, 924, 1344, 1653, 1685, 2063 |
| BfmI | CTRYAG | 1 cut(s) | 1381 |
| BfrI | CTTAAG | 1 cut(s) | 1934 |
| BglII | AGATCT | 2 cut(s) | 877, 1870 |
| BisI | GCNGC | 4 cut(s) | 1152, 1231, 1682, 1690 |
| BlsI | GCNGC | 4 cut(s) | 1153, 1232, 1683, 1691 |
| BmcAI | AGTACT | 1 cut(s) | 1586 |
| Bme1390I | CCNGG | 3 cut(s) | 248, 279, 655 |
| Bme18I | GGWCC | 1 cut(s) | 1887 |
| BmgBI | CACGTC | 1 cut(s) | 1641 |
| BmgT120I | GGNCC | 4 cut(s) | 389, 390, 1445, 1887 |
| BmiI | GGNNCC | 2 cut(s) | 391, 1888 |
| BmrFI | CCNGG | 3 cut(s) | 248, 279, 655 |
| BmrI | ACTGGG | 1 cut(s) | 612 |
| BmsI | GCATC | 4 cut(s) | 448, 528, 1747, 1931 |
| BmuI | ACTGGG | 1 cut(s) | 612 |
| BpiI | GAAGAC | 1 cut(s) | 1061 |
| BpmI | CTGGAG | 1 cut(s) | 2180 |
| BpuMI | CCSGG | 1 cut(s) | 279 |
| BsaJI | CCNNGG | 4 cut(s) | 246, 370, 1401, 1855 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1994, 2024 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 376, 1909, 2002 |
| Bse1I | ACTGG | 2 cut(s) | 618, 1756 |
| Bse3DI | GCAATG | 2 cut(s) | 1651, 2013 |
| BseBI | CCWGG | 2 cut(s) | 248, 655 |
| BseDI | CCNNGG | 4 cut(s) | 246, 370, 1401, 1855 |
| BseGI | GGATG | 9 cut(s) | 663, 801, 920, 1025, 1246, 1441, 1951, 2133, 2176 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 376, 1909, 2002 |
| BseMI | GCAATG | 2 cut(s) | 1651, 2013 |
| BseMII | CTCAG | 2 cut(s) | 217, 1756 |
| BseNI | ACTGG | 2 cut(s) | 618, 1756 |
| BseRI | GAGGAG | 1 cut(s) | 214 |
| BseSI | GKGCMC | 1 cut(s) | 393 |
| BseXI | GCAGC | 4 cut(s) | 1138, 1217, 1668, 1701 |
| BsgI | GTGCAG | 1 cut(s) | 120 |
| Bsh1285I | CGRYCG | 1 cut(s) | 612 |
| BshFI | GGCC | 5 cut(s) | 216, 391, 1167, 1447, 1902 |
| BsiEI | CGRYCG | 1 cut(s) | 612 |
| BsiHKAI | GWGCWC | 1 cut(s) | 830 |
| BsiSI | CCGG | 1 cut(s) | 278 |
| BslFI | GGGAC | 1 cut(s) | 1641 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 376, 1909, 2002 |
| BsmFI | GGGAC | 1 cut(s) | 1641 |
| BsmI | GAATGC | 2 cut(s) | 1501, 2180 |
| BsnI | GGCC | 5 cut(s) | 216, 391, 1167, 1447, 1902 |
| Bsp120I | GGGCCC | 1 cut(s) | 389 |
| Bsp1286I | GDGCHC | 2 cut(s) | 393, 830 |
| Bsp1407I | TGTACA | 4 cut(s) | 44, 814, 1251, 1848 |
| Bsp143I | GATC | 7 cut(s) | 660, 877, 1289, 1509, 1870, 2097, 2135 |
| Bsp19I | CCATGG | 1 cut(s) | 370 |
| BspACI | CCGC | 2 cut(s) | 56, 1161 |
| BspANI | GGCC | 5 cut(s) | 216, 391, 1167, 1447, 1902 |
| BspCNI | CTCAG | 2 cut(s) | 216, 1755 |
| BspHI | TCATGA | 1 cut(s) | 1057 |
| BspLI | GGNNCC | 2 cut(s) | 391, 1888 |
| BspPI | GGATC | 3 cut(s) | 655, 1504, 2092 |
| BspTI | CTTAAG | 1 cut(s) | 1934 |
| BsrDI | GCAATG | 2 cut(s) | 1651, 2013 |
| BsrGI | TGTACA | 4 cut(s) | 44, 814, 1251, 1848 |
| BsrI | ACTGG | 2 cut(s) | 618, 1756 |
| BssECI | CCNNGG | 4 cut(s) | 246, 370, 1401, 1855 |
| BssMI | GATC | 7 cut(s) | 660, 877, 1289, 1509, 1870, 2097, 2135 |
| BssSI | CACGAG | 1 cut(s) | 1280 |
| BssT1I | CCWWGG | 3 cut(s) | 370, 1401, 1855 |
| Bst2BI | CACGAG | 1 cut(s) | 1280 |
| Bst2UI | CCWGG | 2 cut(s) | 248, 655 |
| Bst4CI | ACNGT | 3 cut(s) | 49, 292, 1616 |
| Bst6I | CTCTTC | 2 cut(s) | 794, 2126 |
| BstAFI | CTTAAG | 1 cut(s) | 1934 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1695, 1928 |
| BstAUI | TGTACA | 4 cut(s) | 44, 814, 1251, 1848 |
| BstC8I | GCNNGC | 5 cut(s) | 86, 209, 826, 1486, 1968 |
| BstDEI | CTNAG | 5 cut(s) | 203, 639, 644, 1002, 1742 |
| BstDSI | CCRYGG | 1 cut(s) | 370 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1907, 2000 |
| BstF5I | GGATG | 9 cut(s) | 663, 801, 920, 1025, 1246, 1441, 1951, 2133, 2176 |
| BstKTI | GATC | 7 cut(s) | 663, 880, 1292, 1512, 1873, 2100, 2138 |
| BstMBI | GATC | 7 cut(s) | 660, 877, 1289, 1509, 1870, 2097, 2135 |
| BstMCI | CGRYCG | 1 cut(s) | 612 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 10, 143, 213, 1695, 1928 |
| BstNI | CCWGG | 2 cut(s) | 248, 655 |
| BstNSI | RCATGY | 3 cut(s) | 211, 1488, 1849 |
| BstSCI | CCNGG | 3 cut(s) | 246, 277, 653 |
| BstSFI | CTRYAG | 1 cut(s) | 1381 |
| BstSLI | GKGCMC | 1 cut(s) | 393 |
| BstV1I | GCAGC | 4 cut(s) | 1138, 1217, 1668, 1701 |
| BstV2I | GAAGAC | 1 cut(s) | 1061 |
| BstX2I | RGATCY | 3 cut(s) | 877, 1870, 2097 |
| BstYI | RGATCY | 3 cut(s) | 877, 1870, 2097 |
| BsuRI | GGCC | 5 cut(s) | 216, 391, 1167, 1447, 1902 |
| BtgI | CCRYGG | 1 cut(s) | 370 |
| BtrI | CACGTC | 1 cut(s) | 1641 |
| BtsCI | GGATG | 9 cut(s) | 663, 801, 920, 1025, 1246, 1441, 1951, 2133, 2176 |
| BtsIMutI | CAGTG | 2 cut(s) | 288, 1749 |
| Cac8I | GCNNGC | 5 cut(s) | 86, 209, 826, 1486, 1968 |
| CciI | TCATGA | 1 cut(s) | 1057 |
| Cfr13I | GGNCC | 4 cut(s) | 389, 390, 1445, 1887 |
| Csp6I | GTAC | 7 cut(s) | 45, 275, 815, 1252, 1585, 1849, 2022 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 62, 97, 653, 688 |
| CviAII | CATG | 9 cut(s) | 53, 208, 218, 371, 1058, 1485, 1507, 1636, 1846 |
| CviQI | GTAC | 7 cut(s) | 45, 275, 815, 1252, 1585, 1849, 2022 |
| DdeI | CTNAG | 5 cut(s) | 203, 639, 644, 1002, 1742 |
| DpnI | GATC | 7 cut(s) | 662, 879, 1291, 1511, 1872, 2099, 2137 |
| DpnII | GATC | 7 cut(s) | 660, 877, 1289, 1509, 1870, 2097, 2135 |
| DraI | TTTAAA | 2 cut(s) | 894, 1371 |
| DraIII | CACNNNGTG | 1 cut(s) | 338 |
| Eam1104I | CTCTTC | 2 cut(s) | 794, 2126 |
| EarI | CTCTTC | 2 cut(s) | 794, 2126 |
| EciI | GGCGGA | 1 cut(s) | 1176 |
| Eco130I | CCWWGG | 3 cut(s) | 370, 1401, 1855 |
| Eco147I | AGGCCT | 1 cut(s) | 1167 |
| Eco24I | GRGCYC | 1 cut(s) | 393 |
| Eco47I | GGWCC | 1 cut(s) | 1887 |
| Eco57I | CTGAAG | 1 cut(s) | 1553 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1907, 2000 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1887 |
| EcoRII | CCWGG | 2 cut(s) | 246, 653 |
| EcoT14I | CCWWGG | 3 cut(s) | 370, 1401, 1855 |
| EcoT38I | GRGCYC | 1 cut(s) | 393 |
| ErhI | CCWWGG | 3 cut(s) | 370, 1401, 1855 |
| FaeI | CATG | 9 cut(s) | 56, 211, 221, 374, 1061, 1488, 1510, 1639, 1849 |
| FaqI | GGGAC | 1 cut(s) | 1641 |
| FatI | CATG | 9 cut(s) | 52, 207, 217, 370, 1057, 1484, 1506, 1635, 1845 |
| FauNDI | CATATG | 1 cut(s) | 1147 |
| Fnu4HI | GCNGC | 4 cut(s) | 1152, 1231, 1682, 1690 |
| FokI | GGATG | 9 cut(s) | 670, 808, 927, 1032, 1253, 1448, 1958, 2140, 2183 |
| FriOI | GRGCYC | 1 cut(s) | 393 |
| Fsp4HI | GCNGC | 4 cut(s) | 1152, 1231, 1682, 1690 |
| FspBI | CTAG | 6 cut(s) | 183, 924, 1344, 1653, 1685, 2063 |
| GluI | GCNGC | 4 cut(s) | 1152, 1231, 1682, 1690 |
| GsuI | CTGGAG | 1 cut(s) | 2180 |
| HaeIII | GGCC | 5 cut(s) | 216, 391, 1167, 1447, 1902 |
| HapII | CCGG | 1 cut(s) | 278 |
| Hin1II | CATG | 9 cut(s) | 56, 211, 221, 374, 1061, 1488, 1510, 1639, 1849 |
| HincII | GTYRAC | 2 cut(s) | 562, 2075 |
| HindII | GTYRAC | 2 cut(s) | 562, 2075 |
| HindIII | AAGCTT | 2 cut(s) | 581, 641 |
| HinfI | GANTC | 6 cut(s) | 16, 179, 384, 1051, 1525, 1579 |
| HpaI | GTTAAC | 1 cut(s) | 562 |
| HpaII | CCGG | 1 cut(s) | 278 |
| HphI | GGTGA | 3 cut(s) | 18, 70, 977 |
| Hpy188I | TCNGA | 6 cut(s) | 609, 765, 1533, 1612, 1745, 2032 |
| Hpy188III | TCNNGA | 8 cut(s) | 529, 1058, 1073, 1280, 1513, 2014, 2063, 2159 |
| HpyAV | CCTTC | 9 cut(s) | 799, 857, 962, 1010, 1325, 1471, 1807, 1907, 2060 |
| HpyCH4III | ACNGT | 3 cut(s) | 49, 292, 1616 |
| HpyCH4IV | ACGT | 1 cut(s) | 1640 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 10, 143, 213, 1695, 1928 |
| HpyF3I | CTNAG | 5 cut(s) | 203, 639, 644, 1002, 1742 |
| HpySE526I | ACGT | 1 cut(s) | 1640 |
| Hsp92II | CATG | 9 cut(s) | 56, 211, 221, 374, 1061, 1488, 1510, 1639, 1849 |
| KspAI | GTTAAC | 1 cut(s) | 562 |
| Kzo9I | GATC | 7 cut(s) | 660, 877, 1289, 1509, 1870, 2097, 2135 |
| LmnI | GCTCC | 1 cut(s) | 2161 |
| Lsp1109I | GCAGC | 4 cut(s) | 1138, 1217, 1668, 1701 |
| LweI | GCATC | 4 cut(s) | 448, 528, 1747, 1931 |
| MaeI | CTAG | 6 cut(s) | 183, 924, 1344, 1653, 1685, 2063 |
| MaeII | ACGT | 1 cut(s) | 1640 |
| MaeIII | GTNAC | 4 cut(s) | 230, 330, 1277, 1666 |
| MalI | GATC | 7 cut(s) | 662, 879, 1291, 1511, 1872, 2099, 2137 |
| MboI | GATC | 7 cut(s) | 660, 877, 1289, 1509, 1870, 2097, 2135 |
| MfeI | CAATTG | 2 cut(s) | 567, 1832 |
| MflI | RGATCY | 3 cut(s) | 877, 1870, 2097 |
| MhlI | GDGCHC | 2 cut(s) | 393, 830 |
| MlyI | GAGTC | 3 cut(s) | 10, 173, 1534 |
| MmeI | TCCRAC | 4 cut(s) | 576, 632, 1693, 2105 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1092 |
| MspCI | CTTAAG | 1 cut(s) | 1934 |
| MspI | CCGG | 1 cut(s) | 278 |
| MspR9I | CCNGG | 3 cut(s) | 248, 279, 655 |
| MunI | CAATTG | 2 cut(s) | 567, 1832 |
| Mva1269I | GAATGC | 2 cut(s) | 1501, 2180 |
| MvaI | CCWGG | 2 cut(s) | 248, 655 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 10, 143, 213, 1695, 1928 |
| NciI | CCSGG | 1 cut(s) | 279 |
| NcoI | CCATGG | 1 cut(s) | 370 |
| NdeI | CATATG | 1 cut(s) | 1147 |
| NdeII | GATC | 7 cut(s) | 660, 877, 1289, 1509, 1870, 2097, 2135 |
| NlaIII | CATG | 9 cut(s) | 56, 211, 221, 374, 1061, 1488, 1510, 1639, 1849 |
| NlaIV | GGNNCC | 2 cut(s) | 391, 1888 |
| NmuCI | GTSAC | 3 cut(s) | 330, 1277, 1666 |
| NspI | RCATGY | 3 cut(s) | 211, 1488, 1849 |
| PaeI | GCATGC | 2 cut(s) | 211, 1488 |
| PagI | TCATGA | 1 cut(s) | 1057 |
| PceI | AGGCCT | 1 cut(s) | 1167 |
| PciI | ACATGT | 1 cut(s) | 1845 |
| PctI | GAATGC | 2 cut(s) | 1501, 2180 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1092 |
| PfeI | GAWTC | 3 cut(s) | 384, 1051, 1579 |
| PflFI | GACNNNGTC | 1 cut(s) | 1088 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 376 |
| PkrI | GCNGC | 4 cut(s) | 1153, 1232, 1683, 1691 |
| PleI | GAGTC | 3 cut(s) | 10, 173, 1533 |
| PpsI | GAGTC | 3 cut(s) | 10, 173, 1533 |
| PpuMI | RGGWCCY | 1 cut(s) | 1887 |
| PscI | ACATGT | 1 cut(s) | 1845 |
| PsiI | TTATAA | 2 cut(s) | 771, 1779 |
| Psp5II | RGGWCCY | 1 cut(s) | 1887 |
| Psp6I | CCWGG | 2 cut(s) | 246, 653 |
| PspGI | CCWGG | 2 cut(s) | 246, 653 |
| PspN4I | GGNNCC | 2 cut(s) | 391, 1888 |
| PspOMI | GGGCCC | 1 cut(s) | 389 |
| PspPI | GGNCC | 4 cut(s) | 389, 390, 1445, 1887 |
| PspPPI | RGGWCCY | 1 cut(s) | 1887 |
| PsuI | RGATCY | 3 cut(s) | 877, 1870, 2097 |
| PsyI | GACNNNGTC | 1 cut(s) | 1088 |
| RsaI | GTAC | 7 cut(s) | 46, 276, 816, 1253, 1586, 1850, 2023 |
| RsaNI | GTAC | 7 cut(s) | 45, 275, 815, 1252, 1585, 1849, 2022 |
| SatI | GCNGC | 4 cut(s) | 1152, 1231, 1682, 1690 |
| Sau3AI | GATC | 7 cut(s) | 660, 877, 1289, 1509, 1870, 2097, 2135 |
| Sau96I | GGNCC | 4 cut(s) | 389, 390, 1445, 1887 |
| ScaI | AGTACT | 1 cut(s) | 1586 |
| SchI | GAGTC | 3 cut(s) | 10, 173, 1534 |
| ScrFI | CCNGG | 3 cut(s) | 248, 279, 655 |
| SduI | GDGCHC | 2 cut(s) | 393, 830 |
| SfaNI | GCATC | 4 cut(s) | 448, 528, 1747, 1931 |
| SfcI | CTRYAG | 1 cut(s) | 1381 |
| SinI | GGWCC | 1 cut(s) | 1887 |
| SmlI | CTYRAG | 1 cut(s) | 1934 |
| SmoI | CTYRAG | 1 cut(s) | 1934 |
| SphI | GCATGC | 2 cut(s) | 211, 1488 |
| SseBI | AGGCCT | 1 cut(s) | 1167 |
| SsiI | CCGC | 2 cut(s) | 56, 1161 |
| SspI | AATATT | 1 cut(s) | 1783 |
| SspMI | CTAG | 6 cut(s) | 183, 924, 1344, 1653, 1685, 2063 |
| StuI | AGGCCT | 1 cut(s) | 1167 |
| StyD4I | CCNGG | 3 cut(s) | 246, 277, 653 |
| StyI | CCWWGG | 3 cut(s) | 370, 1401, 1855 |
| TaaI | ACNGT | 3 cut(s) | 49, 292, 1616 |
| TaiI | ACGT | 1 cut(s) | 1643 |
| TaqI | TCGA | 2 cut(s) | 407, 521 |
| TaqII | GACCGA | 1 cut(s) | 626 |
| TatI | WGTACW | 5 cut(s) | 44, 814, 1251, 1584, 1848 |
| TfiI | GAWTC | 3 cut(s) | 384, 1051, 1579 |
| TscAI | CASTG | 2 cut(s) | 295, 1756 |
| TseFI | GTSAC | 3 cut(s) | 330, 1277, 1666 |
| TseI | GCWGC | 4 cut(s) | 1151, 1230, 1681, 1689 |
| Tsp45I | GTSAC | 3 cut(s) | 330, 1277, 1666 |
| TspRI | CASTG | 2 cut(s) | 295, 1756 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1088 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 376 |
| Vha464I | CTTAAG | 1 cut(s) | 1934 |
| VpaK11BI | GGWCC | 1 cut(s) | 1887 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1907, 2000 |
| XapI | RAATTY | 5 cut(s) | 78, 400, 1604, 2052, 2153 |
| XbaI | TCTAGA | 1 cut(s) | 2062 |
| XceI | RCATGY | 3 cut(s) | 211, 1488, 1849 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 224 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1092 |
| XspI | CTAG | 6 cut(s) | 183, 924, 1344, 1653, 1685, 2063 |
| ZrmI | AGTACT | 1 cut(s) | 1586 |