Non-catalytic subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23760 AT1G70370 AT1G70370 |
| fragaria_vesca | FvH4_4g34470 FvH4_5g05190 |
| malus_domestica | MD06G1175800.v1.1 MD06G1176400.v1.1 MD13G1092000.v1.1 MD16G1092600.v1.1 |
| prunus_persica | Prupe.1G253700_v2.0.a1 Prupe.1G253800_v2.0.a1 Prupe.1G253800_v2.0.a1 Prupe.5G175100_v2.0.a1 |
| pyrus_communis | pycom06g15640 pycom13g08000 pycom16g07900 |
| rosa_chinensis | RchiOBHm_Chr4g0443861 RchiOBHm_Chr7g0193731 |
| rosa_laevigata | RLG00000004248 RLG00000005883 |
| rosa_multiflora | Rmu_co8475093.1_g000001 Rmu_sc0001436.1_g000011 Rmu_sc0005632.1_g000009 Rmu_sc0019062.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00261870 Rroxscaffold_5G00384420 |
| rosa_rugosa | Rorug04G0347800.1 Rorug07G0011500 |
| rosa_samantha | Rh4AG408400 Rh4BG419400 Rh4CG433400 Rh4DG414400 Rh7AG138400 Rh7BG138600 Rh7CG142200 Rh7DG139700 |
| rosa_wichuraiana | Rw4G035060 Rw7G011790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 824, 1067, 1363 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1766 |
| AccI | GTMKAC | 3 cut(s) | 216, 411, 453 |
| AccII | CGCG | 2 cut(s) | 86, 477 |
| AclI | AACGTT | 2 cut(s) | 612, 1148 |
| AclWI | GGATC | 4 cut(s) | 783, 796, 1546, 1570 |
| AcoI | YGGCCR | 1 cut(s) | 90 |
| AcsI | RAATTY | 4 cut(s) | 778, 1208, 1335, 1353 |
| AcyI | GRCGYC | 3 cut(s) | 825, 1364, 1401 |
| AfaI | GTAC | 4 cut(s) | 140, 638, 974, 1058 |
| AfeI | AGCGCT | 1 cut(s) | 1432 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 99, 313, 314, 657, 1433, 1766 |
| AflIII | ACRYGT | 1 cut(s) | 1743 |
| AjiI | CACGTC | 1 cut(s) | 1746 |
| AjnI | CCWGG | 2 cut(s) | 528, 1359 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 611, 643, 1542, 1574 |
| Alw21I | GWGCWC | 2 cut(s) | 1347, 1426 |
| Alw26I | GTCTC | 4 cut(s) | 46, 911, 930, 1433 |
| AlwI | GGATC | 4 cut(s) | 783, 796, 1546, 1570 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 578 |
| Aor51HI | AGCGCT | 1 cut(s) | 1432 |
| AoxI | GGCC | 7 cut(s) | 90, 123, 195, 316, 514, 660, 741 |
| ApaI | GGGCCC | 2 cut(s) | 664, 745 |
| ApeKI | GCWGC | 5 cut(s) | 7, 242, 268, 900, 1449 |
| ApoI | RAATTY | 4 cut(s) | 778, 1208, 1335, 1353 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1589, 1621 |
| AseI | ATTAAT | 1 cut(s) | 1713 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 752, 878 |
| AspLEI | GCGC | 3 cut(s) | 827, 1366, 1433 |
| AsuC2I | CCSGG | 6 cut(s) | 518, 793, 1054, 1203, 1217, 1797 |
| AsuHPI | GGTGA | 5 cut(s) | 346, 619, 829, 916, 965 |
| AsuII | TTCGAA | 1 cut(s) | 1029 |
| AvaII | GGWCC | 4 cut(s) | 154, 535, 1690, 1793 |
| BaeGI | GKGCMC | 3 cut(s) | 664, 745, 1072 |
| BamHI | GGATCC | 1 cut(s) | 788 |
| BanI | GGYRCC | 3 cut(s) | 824, 1067, 1363 |
| BanII | GRGCYC | 4 cut(s) | 664, 745, 1347, 1426 |
| Bbv12I | GWGCWC | 2 cut(s) | 1347, 1426 |
| BbvCI | CCTCAGC | 1 cut(s) | 1464 |
| BbvI | GCAGC | 5 cut(s) | 19, 254, 255, 912, 1436 |
| BccI | CCATC | 5 cut(s) | 135, 184, 393, 1620, 1736 |
| BceAI | ACGGC | 8 cut(s) | 105, 355, 408, 529, 781, 1006, 1033, 1597 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 201, 235, 250, 284, 1009, 1043, 1489, 1523 |
| BciT130I | CCWGG | 2 cut(s) | 530, 1361 |
| BcnI | CCSGG | 6 cut(s) | 518, 793, 1054, 1203, 1217, 1797 |
| BcoDI | GTCTC | 4 cut(s) | 46, 911, 930, 1433 |
| BfaI | CTAG | 3 cut(s) | 26, 38, 1496 |
| BfmI | CTRYAG | 3 cut(s) | 269, 679, 931 |
| BfoI | RGCGCY | 3 cut(s) | 828, 1367, 1434 |
| BglII | AGATCT | 2 cut(s) | 1095, 1681 |
| BisI | GCNGC | 8 cut(s) | 8, 225, 243, 269, 475, 901, 909, 1450 |
| BlsI | GCNGC | 8 cut(s) | 9, 226, 244, 270, 476, 902, 910, 1451 |
| Bme1390I | CCNGG | 8 cut(s) | 518, 530, 793, 1054, 1203, 1217, 1361, 1797 |
| Bme18I | GGWCC | 4 cut(s) | 154, 535, 1690, 1793 |
| BmgBI | CACGTC | 1 cut(s) | 1746 |
| BmrFI | CCNGG | 8 cut(s) | 518, 530, 793, 1054, 1203, 1217, 1361, 1797 |
| BmrI | ACTGGG | 2 cut(s) | 588, 1291 |
| BmsI | GCATC | 2 cut(s) | 1236, 1263 |
| BmuI | ACTGGG | 2 cut(s) | 588, 1291 |
| BoxI | GACNNNNGTC | 1 cut(s) | 212 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1747, 1779 |
| Bpu10I | CCTNAGC | 2 cut(s) | 97, 1464 |
| Bpu14I | TTCGAA | 1 cut(s) | 1029 |
| BpuEI | CTTGAG | 2 cut(s) | 1214, 1331 |
| BpuMI | CCSGG | 6 cut(s) | 518, 793, 1054, 1203, 1217, 1797 |
| BsaHI | GRCGYC | 3 cut(s) | 825, 1364, 1401 |
| BsaJI | CCNNGG | 6 cut(s) | 120, 1072, 1380, 1404, 1521, 1701 |
| BsaWI | WCCGGW | 1 cut(s) | 560 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1068, 1098 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 99, 313, 314, 657, 1433, 1766 |
| Bse118I | RCCGGY | 1 cut(s) | 698 |
| Bse1I | ACTGG | 4 cut(s) | 146, 583, 1297, 1823 |
| Bse3DI | GCAATG | 1 cut(s) | 910 |
| BseBI | CCWGG | 2 cut(s) | 530, 1361 |
| BseDI | CCNNGG | 6 cut(s) | 120, 1072, 1380, 1404, 1521, 1701 |
| BseGI | GGATG | 3 cut(s) | 502, 649, 1260 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 99, 313, 314, 657, 1433, 1766 |
| BseMI | GCAATG | 1 cut(s) | 910 |
| BseMII | CTCAG | 8 cut(s) | 111, 260, 444, 495, 1134, 1183, 1455, 1503 |
| BseNI | ACTGG | 4 cut(s) | 146, 583, 1297, 1823 |
| BseRI | GAGGAG | 2 cut(s) | 24, 287 |
| BseSI | GKGCMC | 3 cut(s) | 664, 745, 1072 |
| BseXI | GCAGC | 5 cut(s) | 19, 254, 255, 912, 1436 |
| Bsh1236I | CGCG | 2 cut(s) | 86, 477 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1801 |
| BshFI | GGCC | 7 cut(s) | 92, 125, 197, 318, 516, 662, 743 |
| BshNI | GGYRCC | 3 cut(s) | 824, 1067, 1363 |
| BsiEI | CGRYCG | 1 cut(s) | 1801 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1347, 1426 |
| BsiSI | CCGG | 8 cut(s) | 518, 561, 699, 792, 1053, 1202, 1216, 1797 |
| BsiWI | CGTACG | 1 cut(s) | 972 |
| BslFI | GGGAC | 2 cut(s) | 403, 1779 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 99, 313, 314, 657, 1433, 1766 |
| BsmAI | GTCTC | 4 cut(s) | 46, 911, 930, 1433 |
| BsmFI | GGGAC | 2 cut(s) | 403, 1779 |
| BsmI | GAATGC | 1 cut(s) | 1418 |
| BsnI | GGCC | 7 cut(s) | 92, 125, 197, 318, 516, 662, 743 |
| Bsp119I | TTCGAA | 1 cut(s) | 1029 |
| Bsp120I | GGGCCC | 2 cut(s) | 660, 741 |
| Bsp1286I | GDGCHC | 5 cut(s) | 664, 745, 1072, 1347, 1426 |
| Bsp143I | GATC | 7 cut(s) | 788, 1095, 1389, 1473, 1538, 1562, 1681 |
| Bsp19I | CCATGG | 1 cut(s) | 1380 |
| Bsp68I | TCGCGA | 1 cut(s) | 86 |
| BspANI | GGCC | 7 cut(s) | 92, 125, 197, 318, 516, 662, 743 |
| BspCNI | CTCAG | 8 cut(s) | 110, 259, 443, 494, 1133, 1182, 1456, 1502 |
| BspFNI | CGCG | 2 cut(s) | 86, 477 |
| BspHI | TCATGA | 1 cut(s) | 334 |
| BspMAI | CTGCAG | 1 cut(s) | 273 |
| BspPI | GGATC | 4 cut(s) | 783, 796, 1546, 1570 |
| BspT104I | TTCGAA | 1 cut(s) | 1029 |
| BspT107I | GGYRCC | 3 cut(s) | 824, 1067, 1363 |
| BsrDI | GCAATG | 1 cut(s) | 910 |
| BsrFI | RCCGGY | 1 cut(s) | 698 |
| BsrI | ACTGG | 4 cut(s) | 146, 583, 1297, 1823 |
| BssAI | RCCGGY | 1 cut(s) | 698 |
| BssECI | CCNNGG | 6 cut(s) | 120, 1072, 1380, 1404, 1521, 1701 |
| BssMI | GATC | 7 cut(s) | 788, 1095, 1389, 1473, 1538, 1562, 1681 |
| BssNI | GRCGYC | 3 cut(s) | 825, 1364, 1401 |
| BssT1I | CCWWGG | 4 cut(s) | 120, 1380, 1404, 1701 |
| Bst2UI | CCWGG | 2 cut(s) | 530, 1361 |
| Bst4CI | ACNGT | 4 cut(s) | 683, 941, 1061, 1103 |
| BstACI | GRCGYC | 3 cut(s) | 825, 1364, 1401 |
| BstBI | TTCGAA | 1 cut(s) | 1029 |
| BstC8I | GCNNGC | 4 cut(s) | 94, 660, 700, 1435 |
| BstDEI | CTNAG | 8 cut(s) | 97, 246, 430, 481, 1120, 1169, 1464, 1489 |
| BstDSI | CCRYGG | 3 cut(s) | 1072, 1380, 1521 |
| BstF5I | GGATG | 3 cut(s) | 502, 649, 1260 |
| BstFNI | CGCG | 2 cut(s) | 86, 477 |
| BstH2I | RGCGCY | 3 cut(s) | 828, 1367, 1434 |
| BstHHI | GCGC | 3 cut(s) | 827, 1366, 1433 |
| BstKTI | GATC | 7 cut(s) | 791, 1098, 1392, 1476, 1541, 1565, 1684 |
| BstMAI | GTCTC | 4 cut(s) | 46, 911, 930, 1433 |
| BstMBI | GATC | 7 cut(s) | 788, 1095, 1389, 1473, 1538, 1562, 1681 |
| BstMCI | CGRYCG | 1 cut(s) | 1801 |
| BstNI | CCWGG | 2 cut(s) | 530, 1361 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 212 |
| BstSCI | CCNGG | 8 cut(s) | 516, 528, 791, 1052, 1201, 1215, 1359, 1795 |
| BstSFI | CTRYAG | 3 cut(s) | 269, 679, 931 |
| BstSLI | GKGCMC | 3 cut(s) | 664, 745, 1072 |
| BstUI | CGCG | 2 cut(s) | 86, 477 |
| BstV1I | GCAGC | 5 cut(s) | 19, 254, 255, 912, 1436 |
| BstX2I | RGATCY | 3 cut(s) | 788, 1095, 1681 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 532 |
| BstYI | RGATCY | 3 cut(s) | 788, 1095, 1681 |
| BsuRI | GGCC | 7 cut(s) | 92, 125, 197, 318, 516, 662, 743 |
| BtgI | CCRYGG | 3 cut(s) | 1072, 1380, 1521 |
| BtrI | CACGTC | 1 cut(s) | 1746 |
| BtsCI | GGATG | 3 cut(s) | 502, 649, 1260 |
| BtsI | GCAGTG | 2 cut(s) | 672, 918 |
| BtsIMutI | CAGTG | 6 cut(s) | 672, 688, 918, 946, 1177, 1816 |
| BtuMI | TCGCGA | 1 cut(s) | 86 |
| Cac8I | GCNNGC | 4 cut(s) | 94, 660, 700, 1435 |
| CaiI | CAGNNNCTG | 1 cut(s) | 578 |
| CciI | TCATGA | 1 cut(s) | 334 |
| CfoI | GCGC | 3 cut(s) | 827, 1366, 1433 |
| Cfr10I | RCCGGY | 1 cut(s) | 698 |
| CseI | GACGC | 4 cut(s) | 173, 782, 1409, 1446 |
| CsiI | ACCWGGT | 1 cut(s) | 528 |
| Csp6I | GTAC | 4 cut(s) | 139, 637, 973, 1057 |
| CviAII | CATG | 7 cut(s) | 335, 1225, 1252, 1381, 1393, 1718, 1766 |
| CviQI | GTAC | 4 cut(s) | 139, 637, 973, 1057 |
| DdeI | CTNAG | 8 cut(s) | 97, 246, 430, 481, 1120, 1169, 1464, 1489 |
| DinI | GGCGCC | 2 cut(s) | 826, 1365 |
| DpnI | GATC | 7 cut(s) | 790, 1097, 1391, 1475, 1540, 1564, 1683 |
| DpnII | GATC | 7 cut(s) | 788, 1095, 1389, 1473, 1538, 1562, 1681 |
| EaeI | YGGCCR | 1 cut(s) | 90 |
| EciI | GGCGGA | 2 cut(s) | 277, 1599 |
| Ecl136II | GAGCTC | 2 cut(s) | 1345, 1424 |
| Eco130I | CCWWGG | 4 cut(s) | 120, 1380, 1404, 1701 |
| Eco147I | AGGCCT | 1 cut(s) | 197 |
| Eco24I | GRGCYC | 4 cut(s) | 664, 745, 1347, 1426 |
| Eco47I | GGWCC | 4 cut(s) | 154, 535, 1690, 1793 |
| Eco47III | AGCGCT | 1 cut(s) | 1432 |
| Eco53kI | GAGCTC | 2 cut(s) | 1345, 1424 |
| EcoICRI | GAGCTC | 2 cut(s) | 1345, 1424 |
| EcoO109I | RGGNCCY | 3 cut(s) | 741, 742, 1793 |
| EcoRII | CCWGG | 2 cut(s) | 528, 1359 |
| EcoT14I | CCWWGG | 4 cut(s) | 120, 1380, 1404, 1701 |
| EcoT38I | GRGCYC | 4 cut(s) | 664, 745, 1347, 1426 |
| EgeI | GGCGCC | 2 cut(s) | 826, 1365 |
| EheI | GGCGCC | 2 cut(s) | 826, 1365 |
| ErhI | CCWWGG | 4 cut(s) | 120, 1380, 1404, 1701 |
| FaeI | CATG | 7 cut(s) | 338, 1228, 1255, 1384, 1396, 1721, 1769 |
| FaqI | GGGAC | 2 cut(s) | 403, 1779 |
| FatI | CATG | 7 cut(s) | 334, 1224, 1251, 1380, 1392, 1717, 1765 |
| FauI | CCCGC | 1 cut(s) | 651 |
| FblI | GTMKAC | 3 cut(s) | 216, 411, 453 |
| Fnu4HI | GCNGC | 8 cut(s) | 8, 225, 243, 269, 475, 901, 909, 1450 |
| FokI | GGATG | 3 cut(s) | 509, 656, 1247 |
| FriOI | GRGCYC | 4 cut(s) | 664, 745, 1347, 1426 |
| Fsp4HI | GCNGC | 8 cut(s) | 8, 225, 243, 269, 475, 901, 909, 1450 |
| FspBI | CTAG | 3 cut(s) | 26, 38, 1496 |
| GlaI | GCGC | 3 cut(s) | 826, 1365, 1432 |
| GluI | GCNGC | 8 cut(s) | 8, 225, 243, 269, 475, 901, 909, 1450 |
| HaeII | RGCGCY | 3 cut(s) | 828, 1367, 1434 |
| HaeIII | GGCC | 7 cut(s) | 92, 125, 197, 318, 516, 662, 743 |
| HapII | CCGG | 8 cut(s) | 518, 561, 699, 792, 1053, 1202, 1216, 1797 |
| HgaI | GACGC | 4 cut(s) | 173, 782, 1409, 1446 |
| HhaI | GCGC | 3 cut(s) | 827, 1366, 1433 |
| Hin1I | GRCGYC | 3 cut(s) | 825, 1364, 1401 |
| Hin1II | CATG | 7 cut(s) | 338, 1228, 1255, 1384, 1396, 1721, 1769 |
| Hin6I | GCGC | 3 cut(s) | 825, 1364, 1431 |
| HinP1I | GCGC | 3 cut(s) | 825, 1364, 1431 |
| HincII | GTYRAC | 5 cut(s) | 217, 412, 454, 487, 1534 |
| HindII | GTYRAC | 5 cut(s) | 217, 412, 454, 487, 1534 |
| HpaII | CCGG | 8 cut(s) | 518, 561, 699, 792, 1053, 1202, 1216, 1797 |
| HphI | GGTGA | 5 cut(s) | 346, 619, 829, 916, 965 |
| Hpy188III | TCNNGA | 8 cut(s) | 85, 259, 335, 421, 883, 1093, 1231, 1594 |
| Hpy99I | CGWCG | 7 cut(s) | 91, 167, 788, 992, 1462, 1511, 1514 |
| HpyAV | CCTTC | 3 cut(s) | 679, 991, 1228 |
| HpyCH4III | ACNGT | 4 cut(s) | 683, 941, 1061, 1103 |
| HpyCH4IV | ACGT | 6 cut(s) | 612, 948, 1148, 1506, 1530, 1745 |
| HpyCH4V | TGCA | 3 cut(s) | 233, 271, 1484 |
| HpyF3I | CTNAG | 8 cut(s) | 97, 246, 430, 481, 1120, 1169, 1464, 1489 |
| HpySE526I | ACGT | 6 cut(s) | 612, 948, 1148, 1506, 1530, 1745 |
| Hsp92I | GRCGYC | 3 cut(s) | 825, 1364, 1401 |
| Hsp92II | CATG | 7 cut(s) | 338, 1228, 1255, 1384, 1396, 1721, 1769 |
| HspAI | GCGC | 3 cut(s) | 825, 1364, 1431 |
| KasI | GGCGCC | 2 cut(s) | 824, 1363 |
| KroI | GCCGGC | 1 cut(s) | 698 |
| KroNI | GCCGGC | 1 cut(s) | 700 |
| Kzo9I | GATC | 7 cut(s) | 788, 1095, 1389, 1473, 1538, 1562, 1681 |
| LmnI | GCTCC | 3 cut(s) | 4, 563, 1429 |
| Lsp1109I | GCAGC | 5 cut(s) | 19, 254, 255, 912, 1436 |
| LweI | GCATC | 2 cut(s) | 1236, 1263 |
| MabI | ACCWGGT | 1 cut(s) | 528 |
| MaeI | CTAG | 3 cut(s) | 26, 38, 1496 |
| MaeII | ACGT | 6 cut(s) | 612, 948, 1148, 1506, 1530, 1745 |
| MaeIII | GTNAC | 6 cut(s) | 28, 76, 467, 803, 953, 1591 |
| MalI | GATC | 7 cut(s) | 790, 1097, 1391, 1475, 1540, 1564, 1683 |
| MboI | GATC | 7 cut(s) | 788, 1095, 1389, 1473, 1538, 1562, 1681 |
| MboII | GAAGA | 7 cut(s) | 43, 276, 1204, 1299, 1399, 1421, 1720 |
| MflI | RGATCY | 3 cut(s) | 788, 1095, 1681 |
| MhlI | GDGCHC | 5 cut(s) | 664, 745, 1072, 1347, 1426 |
| MluCI | AATT | 9 cut(s) | 778, 844, 1003, 1012, 1111, 1208, 1313, 1335, 1353 |
| Mly113I | GGCGCC | 2 cut(s) | 825, 1364 |
| MmeI | TCCRAC | 5 cut(s) | 766, 1011, 1020, 1781, 1784 |
| MreI | CGCCGGCG | 1 cut(s) | 698 |
| MroNI | GCCGGC | 1 cut(s) | 698 |
| MroXI | GAANNNNTTC | 2 cut(s) | 752, 878 |
| MseI | TTAA | 1 cut(s) | 1713 |
| MslI | CAYNNNNRTG | 1 cut(s) | 495 |
| MspI | CCGG | 8 cut(s) | 518, 561, 699, 792, 1053, 1202, 1216, 1797 |
| MspR9I | CCNGG | 8 cut(s) | 518, 530, 793, 1054, 1203, 1217, 1361, 1797 |
| Mva1269I | GAATGC | 1 cut(s) | 1418 |
| MvaI | CCWGG | 2 cut(s) | 530, 1361 |
| MvnI | CGCG | 2 cut(s) | 86, 477 |
| NaeI | GCCGGC | 1 cut(s) | 700 |
| NarI | GGCGCC | 2 cut(s) | 825, 1364 |
| NciI | CCSGG | 6 cut(s) | 518, 793, 1054, 1203, 1217, 1797 |
| NcoI | CCATGG | 1 cut(s) | 1380 |
| NdeII | GATC | 7 cut(s) | 788, 1095, 1389, 1473, 1538, 1562, 1681 |
| NgoMIV | GCCGGC | 1 cut(s) | 698 |
| NlaIII | CATG | 7 cut(s) | 338, 1228, 1255, 1384, 1396, 1721, 1769 |
| NmeAIII | GCCGAG | 2 cut(s) | 200, 244 |
| NmuCI | GTSAC | 3 cut(s) | 28, 953, 1591 |
| NruI | TCGCGA | 1 cut(s) | 86 |
| NspV | TTCGAA | 1 cut(s) | 1029 |
| PagI | TCATGA | 1 cut(s) | 334 |
| PceI | AGGCCT | 1 cut(s) | 197 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 780, 954, 968 |
| PctI | GAATGC | 1 cut(s) | 1418 |
| PdiI | GCCGGC | 1 cut(s) | 700 |
| PdmI | GAANNNNTTC | 2 cut(s) | 752, 878 |
| PfeI | GAWTC | 4 cut(s) | 133, 627, 647, 1575 |
| Pfl23II | CGTACG | 1 cut(s) | 972 |
| PflFI | GACNNNGTC | 2 cut(s) | 482, 1529 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1766 |
| PfoI | TCCNGGA | 1 cut(s) | 1215 |
| PkrI | GCNGC | 8 cut(s) | 9, 226, 244, 270, 476, 902, 910, 1451 |
| PluTI | GGCGCC | 2 cut(s) | 828, 1367 |
| PpuMI | RGGWCCY | 1 cut(s) | 1793 |
| PshAI | GACNNNNGTC | 1 cut(s) | 212 |
| PshBI | ATTAAT | 1 cut(s) | 1713 |
| Psp124BI | GAGCTC | 2 cut(s) | 1347, 1426 |
| Psp1406I | AACGTT | 2 cut(s) | 612, 1148 |
| Psp5II | RGGWCCY | 1 cut(s) | 1793 |
| Psp6I | CCWGG | 2 cut(s) | 528, 1359 |
| PspGI | CCWGG | 2 cut(s) | 528, 1359 |
| PspLI | CGTACG | 1 cut(s) | 972 |
| PspOMI | GGGCCC | 2 cut(s) | 660, 741 |
| PspPPI | RGGWCCY | 1 cut(s) | 1793 |
| PstI | CTGCAG | 1 cut(s) | 273 |
| PstNI | CAGNNNCTG | 1 cut(s) | 578 |
| PsuI | RGATCY | 3 cut(s) | 788, 1095, 1681 |
| PsyI | GACNNNGTC | 2 cut(s) | 482, 1529 |
| RruI | TCGCGA | 1 cut(s) | 86 |
| RsaI | GTAC | 4 cut(s) | 140, 638, 974, 1058 |
| RsaNI | GTAC | 4 cut(s) | 139, 637, 973, 1057 |
| RseI | CAYNNNNRTG | 1 cut(s) | 495 |
| SacI | GAGCTC | 2 cut(s) | 1347, 1426 |
| SalI | GTCGAC | 3 cut(s) | 215, 410, 452 |
| SaqAI | TTAA | 1 cut(s) | 1713 |
| SatI | GCNGC | 8 cut(s) | 8, 225, 243, 269, 475, 901, 909, 1450 |
| Sau3AI | GATC | 7 cut(s) | 788, 1095, 1389, 1473, 1538, 1562, 1681 |
| ScrFI | CCNGG | 8 cut(s) | 518, 530, 793, 1054, 1203, 1217, 1361, 1797 |
| SduI | GDGCHC | 5 cut(s) | 664, 745, 1072, 1347, 1426 |
| SexAI | ACCWGGT | 1 cut(s) | 528 |
| SfaNI | GCATC | 2 cut(s) | 1236, 1263 |
| SfcI | CTRYAG | 3 cut(s) | 269, 679, 931 |
| SfoI | GGCGCC | 2 cut(s) | 826, 1365 |
| SfuI | TTCGAA | 1 cut(s) | 1029 |
| SgrAI | CRCCGGYG | 1 cut(s) | 698 |
| SinI | GGWCC | 4 cut(s) | 154, 535, 1690, 1793 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 495 |
| SmlI | CTYRAG | 2 cut(s) | 1229, 1346 |
| SmoI | CTYRAG | 2 cut(s) | 1229, 1346 |
| Sse9I | AATT | 9 cut(s) | 778, 844, 1003, 1012, 1111, 1208, 1313, 1335, 1353 |
| SseBI | AGGCCT | 1 cut(s) | 197 |
| SspDI | GGCGCC | 2 cut(s) | 824, 1363 |
| SspMI | CTAG | 3 cut(s) | 26, 38, 1496 |
| SstI | GAGCTC | 2 cut(s) | 1347, 1426 |
| StuI | AGGCCT | 1 cut(s) | 197 |
| StyD4I | CCNGG | 8 cut(s) | 516, 528, 791, 1052, 1201, 1215, 1359, 1795 |
| StyI | CCWWGG | 4 cut(s) | 120, 1380, 1404, 1701 |
| TaaI | ACNGT | 4 cut(s) | 683, 941, 1061, 1103 |
| TaiI | ACGT | 6 cut(s) | 615, 951, 1151, 1509, 1533, 1748 |
| TaqI | TCGA | 9 cut(s) | 216, 260, 327, 365, 397, 411, 453, 1029, 1476 |
| TaqII | GACCGA | 1 cut(s) | 1555 |
| TasI | AATT | 9 cut(s) | 778, 844, 1003, 1012, 1111, 1208, 1313, 1335, 1353 |
| TauI | GCSGC | 3 cut(s) | 227, 477, 911 |
| TfiI | GAWTC | 4 cut(s) | 133, 627, 647, 1575 |
| Tru1I | TTAA | 1 cut(s) | 1713 |
| Tru9I | TTAA | 1 cut(s) | 1713 |
| TscAI | CASTG | 6 cut(s) | 679, 688, 918, 946, 1177, 1823 |
| TseFI | GTSAC | 3 cut(s) | 28, 953, 1591 |
| TseI | GCWGC | 5 cut(s) | 7, 242, 268, 900, 1449 |
| Tsp45I | GTSAC | 3 cut(s) | 28, 953, 1591 |
| TspDTI | ATGAA | 2 cut(s) | 43, 1291 |
| TspGWI | ACGGA | 7 cut(s) | 509, 747, 772, 785, 864, 1538, 1551 |
| TspRI | CASTG | 6 cut(s) | 679, 688, 918, 946, 1177, 1823 |
| Tth111I | GACNNNGTC | 2 cut(s) | 482, 1529 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1766 |
| VpaK11BI | GGWCC | 4 cut(s) | 154, 535, 1690, 1793 |
| VspI | ATTAAT | 1 cut(s) | 1713 |
| XapI | RAATTY | 4 cut(s) | 778, 1208, 1335, 1353 |
| XmiI | GTMKAC | 3 cut(s) | 216, 411, 453 |
| XmnI | GAANNNNTTC | 2 cut(s) | 752, 878 |
| XspI | CTAG | 3 cut(s) | 26, 38, 1496 |