Non-catalytic subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23760 AT1G70370 AT1G70370 |
| fragaria_vesca | FvH4_4g34470 FvH4_5g05190 |
| malus_domestica | MD06G1175800.v1.1 MD06G1176400.v1.1 MD13G1092000.v1.1 MD16G1092600.v1.1 |
| prunus_persica | Prupe.1G253700_v2.0.a1 Prupe.1G253800_v2.0.a1 Prupe.1G253800_v2.0.a1 Prupe.5G175100_v2.0.a1 |
| pyrus_communis | pycom06g15640 pycom13g08000 pycom16g07900 |
| rosa_chinensis | RchiOBHm_Chr4g0443861 RchiOBHm_Chr7g0193731 |
| rosa_laevigata | RLG00000004248 RLG00000005883 |
| rosa_multiflora | Rmu_co8475093.1_g000001 Rmu_sc0001436.1_g000011 Rmu_sc0005632.1_g000009 Rmu_sc0019062.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00261870 Rroxscaffold_5G00384420 |
| rosa_rugosa | Rorug04G0347800.1 Rorug07G0011500 |
| rosa_samantha | Rh4AG408400 Rh4BG419400 Rh4CG433400 Rh4DG414400 Rh7AG138400 Rh7BG138600 Rh7CG142200 Rh7DG139700 |
| rosa_wichuraiana | Rw4G035060 Rw7G011790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 401, 419, 575 |
| AccBSI | CCGCTC | 3 cut(s) | 498, 1128, 1587 |
| AccI | GTMKAC | 1 cut(s) | 1082 |
| AccII | CGCG | 6 cut(s) | 218, 341, 1433, 1440, 1454, 1770 |
| AccIII | TCCGGA | 1 cut(s) | 584 |
| AclI | AACGTT | 1 cut(s) | 722 |
| AclWI | GGATC | 5 cut(s) | 121, 342, 582, 595, 932 |
| AcoI | YGGCCR | 1 cut(s) | 1549 |
| AcuI | CTGAAG | 2 cut(s) | 1224, 1878 |
| AcyI | GRCGYC | 4 cut(s) | 420, 534, 576, 786 |
| AdeI | CACNNNGTG | 1 cut(s) | 326 |
| AfaI | GTAC | 7 cut(s) | 482, 860, 1070, 1172, 1676, 1682, 1707 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 136, 616, 1101, 1383, 1484, 1558, 1716, 1817 |
| AflIII | ACRYGT | 2 cut(s) | 1438, 1794 |
| AgsI | TTSAA | 8 cut(s) | 433, 601, 769, 895, 1108, 1135, 1282, 1880 |
| AjiI | CACGTC | 1 cut(s) | 1797 |
| AjnI | CCWGG | 3 cut(s) | 322, 989, 1119 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 539, 571, 623, 655 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 236, 268, 986, 1018 |
| Alw21I | GWGCWC | 1 cut(s) | 662 |
| Alw26I | GTCTC | 3 cut(s) | 777, 869, 1484 |
| AlwI | GGATC | 5 cut(s) | 121, 342, 582, 595, 932 |
| Ama87I | CYCGRG | 4 cut(s) | 655, 937, 1477, 1810 |
| Aor13HI | TCCGGA | 1 cut(s) | 584 |
| AoxI | GGCC | 6 cut(s) | 342, 1087, 1123, 1349, 1473, 1549 |
| ApaI | GGGCCC | 1 cut(s) | 1477 |
| ApeKI | GCWGC | 3 cut(s) | 60, 72, 836 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 764, 1054 |
| AspLEI | GCGC | 3 cut(s) | 422, 578, 1456 |
| AspS9I | GGNCC | 9 cut(s) | 343, 1087, 1092, 1123, 1473, 1474, 1543, 1569, 1839 |
| AvaI | CYCGRG | 4 cut(s) | 655, 937, 1477, 1810 |
| AvaII | GGWCC | 4 cut(s) | 1092, 1543, 1569, 1839 |
| BaeGI | GKGCMC | 1 cut(s) | 1477 |
| BamHI | GGATCC | 1 cut(s) | 587 |
| BanI | GGYRCC | 3 cut(s) | 401, 419, 575 |
| BanII | GRGCYC | 4 cut(s) | 662, 1477, 1511, 1811 |
| BbsI | GAAGAC | 1 cut(s) | 1524 |
| Bbv12I | GWGCWC | 1 cut(s) | 662 |
| BbvI | GCAGC | 3 cut(s) | 72, 84, 848 |
| BccI | CCATC | 2 cut(s) | 165, 1236 |
| BceAI | ACGGC | 6 cut(s) | 415, 563, 751, 1045, 1395, 1648 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 828, 862 |
| BciT130I | CCWGG | 3 cut(s) | 324, 991, 1121 |
| BcoDI | GTCTC | 3 cut(s) | 777, 869, 1484 |
| BfmI | CTRYAG | 1 cut(s) | 691 |
| BfoI | RGCGCY | 2 cut(s) | 423, 579 |
| Bme18I | GGWCC | 4 cut(s) | 1092, 1543, 1569, 1839 |
| BmeT110I | CYCGRG | 4 cut(s) | 655, 937, 1477, 1810 |
| BmgBI | CACGTC | 1 cut(s) | 1797 |
| BmgT120I | GGNCC | 9 cut(s) | 343, 1087, 1092, 1123, 1473, 1474, 1543, 1569, 1839 |
| BmrI | ACTGGG | 3 cut(s) | 65, 145, 1844 |
| BmsI | GCATC | 1 cut(s) | 1293 |
| BmuI | ACTGGG | 3 cut(s) | 65, 145, 1844 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1097 |
| BpiI | GAAGAC | 1 cut(s) | 1524 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 440, 472 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1397 |
| BpuEI | CTTGAG | 1 cut(s) | 49 |
| BsaHI | GRCGYC | 4 cut(s) | 420, 534, 576, 786 |
| BsaI | GGTCTC | 1 cut(s) | 869 |
| BsaJI | CCNNGG | 9 cut(s) | 339, 1120, 1346, 1377, 1431, 1546, 1572, 1710, 1810 |
| BsaWI | WCCGGW | 4 cut(s) | 584, 756, 869, 945 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 136, 616, 1101, 1383, 1484, 1558, 1716, 1817 |
| Bse118I | RCCGGY | 4 cut(s) | 368, 572, 710, 908 |
| Bse1I | ACTGG | 6 cut(s) | 60, 140, 979, 1839, 1842, 1874 |
| Bse3DI | GCAATG | 2 cut(s) | 754, 1561 |
| BseAI | TCCGGA | 1 cut(s) | 584 |
| BseBI | CCWGG | 3 cut(s) | 324, 991, 1121 |
| BseDI | CCNNGG | 9 cut(s) | 339, 1120, 1346, 1377, 1431, 1546, 1572, 1710, 1810 |
| BseGI | GGATG | 2 cut(s) | 41, 1392 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 136, 616, 1101, 1383, 1484, 1558, 1716, 1817 |
| BseMI | GCAATG | 2 cut(s) | 754, 1561 |
| BseMII | CTCAG | 2 cut(s) | 1158, 1524 |
| BseNI | ACTGG | 6 cut(s) | 60, 140, 979, 1839, 1842, 1874 |
| BseRI | GAGGAG | 3 cut(s) | 17, 244, 256 |
| BseSI | GKGCMC | 1 cut(s) | 1477 |
| BseX3I | CGGCCG | 1 cut(s) | 1549 |
| BseXI | GCAGC | 3 cut(s) | 72, 84, 848 |
| Bsh1236I | CGCG | 6 cut(s) | 218, 341, 1433, 1440, 1454, 1770 |
| Bsh1285I | CGRYCG | 2 cut(s) | 616, 1552 |
| BshFI | GGCC | 6 cut(s) | 344, 1089, 1125, 1351, 1475, 1551 |
| BshNI | GGYRCC | 3 cut(s) | 401, 419, 575 |
| BsiEI | CGRYCG | 2 cut(s) | 616, 1552 |
| BsiHKAI | GWGCWC | 1 cut(s) | 662 |
| BsiHKCI | CYCGRG | 4 cut(s) | 655, 937, 1477, 1810 |
| BslFI | GGGAC | 5 cut(s) | 152, 611, 1467, 1827, 1830 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 136, 616, 1101, 1383, 1484, 1558, 1716, 1817 |
| BsmAI | GTCTC | 3 cut(s) | 777, 869, 1484 |
| BsmBI | CGTCTC | 2 cut(s) | 777, 1484 |
| BsmFI | GGGAC | 5 cut(s) | 152, 611, 1467, 1827, 1830 |
| BsnI | GGCC | 6 cut(s) | 344, 1089, 1125, 1351, 1475, 1551 |
| Bso31I | GGTCTC | 1 cut(s) | 869 |
| BsoBI | CYCGRG | 4 cut(s) | 655, 937, 1477, 1810 |
| Bsp120I | GGGCCC | 1 cut(s) | 1473 |
| Bsp1286I | GDGCHC | 4 cut(s) | 662, 1477, 1511, 1811 |
| Bsp13I | TCCGGA | 1 cut(s) | 584 |
| Bsp143I | GATC | 6 cut(s) | 126, 347, 587, 924, 1608, 1761 |
| BspANI | GGCC | 6 cut(s) | 344, 1089, 1125, 1351, 1475, 1551 |
| BspCNI | CTCAG | 2 cut(s) | 1159, 1523 |
| BspEI | TCCGGA | 1 cut(s) | 584 |
| BspFNI | CGCG | 6 cut(s) | 218, 341, 1433, 1440, 1454, 1770 |
| BspPI | GGATC | 5 cut(s) | 121, 342, 582, 595, 932 |
| BspT107I | GGYRCC | 3 cut(s) | 401, 419, 575 |
| BspTNI | GGTCTC | 1 cut(s) | 869 |
| BsrBI | CCGCTC | 3 cut(s) | 498, 1128, 1587 |
| BsrDI | GCAATG | 2 cut(s) | 754, 1561 |
| BsrFI | RCCGGY | 4 cut(s) | 368, 572, 710, 908 |
| BsrI | ACTGG | 6 cut(s) | 60, 140, 979, 1839, 1842, 1874 |
| BssAI | RCCGGY | 4 cut(s) | 368, 572, 710, 908 |
| BssECI | CCNNGG | 9 cut(s) | 339, 1120, 1346, 1377, 1431, 1546, 1572, 1710, 1810 |
| BssMI | GATC | 6 cut(s) | 126, 347, 587, 924, 1608, 1761 |
| BssNI | GRCGYC | 4 cut(s) | 420, 534, 576, 786 |
| BssT1I | CCWWGG | 1 cut(s) | 1710 |
| Bst2UI | CCWGG | 3 cut(s) | 324, 991, 1121 |
| Bst4CI | ACNGT | 7 cut(s) | 863, 1099, 1154, 1189, 1371, 1689, 1900 |
| Bst6I | CTCTTC | 1 cut(s) | 185 |
| BstACI | GRCGYC | 4 cut(s) | 420, 534, 576, 786 |
| BstC8I | GCNNGC | 6 cut(s) | 500, 574, 712, 910, 1417, 1750 |
| BstDEI | CTNAG | 5 cut(s) | 90, 1167, 1397, 1510, 1593 |
| BstDSI | CCRYGG | 4 cut(s) | 339, 1377, 1431, 1572 |
| BstF5I | GGATG | 2 cut(s) | 41, 1392 |
| BstFNI | CGCG | 6 cut(s) | 218, 341, 1433, 1440, 1454, 1770 |
| BstH2I | RGCGCY | 2 cut(s) | 423, 579 |
| BstHHI | GCGC | 3 cut(s) | 422, 578, 1456 |
| BstKTI | GATC | 6 cut(s) | 129, 350, 590, 927, 1611, 1764 |
| BstMAI | GTCTC | 3 cut(s) | 777, 869, 1484 |
| BstMBI | GATC | 6 cut(s) | 126, 347, 587, 924, 1608, 1761 |
| BstMCI | CGRYCG | 2 cut(s) | 616, 1552 |
| BstNI | CCWGG | 3 cut(s) | 324, 991, 1121 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1097 |
| BstSFI | CTRYAG | 1 cut(s) | 691 |
| BstSLI | GKGCMC | 1 cut(s) | 1477 |
| BstUI | CGCG | 6 cut(s) | 218, 341, 1433, 1440, 1454, 1770 |
| BstV1I | GCAGC | 3 cut(s) | 72, 84, 848 |
| BstV2I | GAAGAC | 1 cut(s) | 1524 |
| BstX2I | RGATCY | 1 cut(s) | 587 |
| BstYI | RGATCY | 1 cut(s) | 587 |
| BstZI | CGGCCG | 1 cut(s) | 1549 |
| BsuRI | GGCC | 6 cut(s) | 344, 1089, 1125, 1351, 1475, 1551 |
| BtgI | CCRYGG | 4 cut(s) | 339, 1377, 1431, 1572 |
| BtrI | CACGTC | 1 cut(s) | 1797 |
| BtsCI | GGATG | 2 cut(s) | 41, 1392 |
| BtsIMutI | CAGTG | 6 cut(s) | 53, 122, 1095, 1518, 1832, 1867 |
| Cac8I | GCNNGC | 6 cut(s) | 500, 574, 712, 910, 1417, 1750 |
| CfoI | GCGC | 3 cut(s) | 422, 578, 1456 |
| Cfr10I | RCCGGY | 4 cut(s) | 368, 572, 710, 908 |
| Cfr13I | GGNCC | 9 cut(s) | 343, 1087, 1092, 1123, 1473, 1474, 1543, 1569, 1839 |
| Cfr42I | CCGCGG | 2 cut(s) | 342, 1434 |
| Cfr9I | CCCGGG | 1 cut(s) | 1810 |
| CseI | GACGC | 4 cut(s) | 314, 365, 542, 794 |
| CsiI | ACCWGGT | 1 cut(s) | 322 |
| Csp6I | GTAC | 7 cut(s) | 481, 859, 1069, 1171, 1675, 1681, 1706 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1171, 1206 |
| CviAII | CATG | 3 cut(s) | 1522, 1817, 1888 |
| CviQI | GTAC | 7 cut(s) | 481, 859, 1069, 1171, 1675, 1681, 1706 |
| DdeI | CTNAG | 5 cut(s) | 90, 1167, 1397, 1510, 1593 |
| DinI | GGCGCC | 2 cut(s) | 421, 577 |
| DpnI | GATC | 6 cut(s) | 128, 349, 589, 926, 1610, 1763 |
| DpnII | GATC | 6 cut(s) | 126, 347, 587, 924, 1608, 1761 |
| DraI | TTTAAA | 1 cut(s) | 853 |
| DraIII | CACNNNGTG | 1 cut(s) | 326 |
| EaeI | YGGCCR | 1 cut(s) | 1549 |
| EagI | CGGCCG | 1 cut(s) | 1549 |
| Eam1104I | CTCTTC | 1 cut(s) | 185 |
| EarI | CTCTTC | 1 cut(s) | 185 |
| EciI | GGCGGA | 3 cut(s) | 433, 1417, 1650 |
| Ecl136II | GAGCTC | 1 cut(s) | 660 |
| EclXI | CGGCCG | 1 cut(s) | 1549 |
| Eco130I | CCWWGG | 1 cut(s) | 1710 |
| Eco24I | GRGCYC | 4 cut(s) | 662, 1477, 1511, 1811 |
| Eco31I | GGTCTC | 1 cut(s) | 869 |
| Eco47I | GGWCC | 4 cut(s) | 1092, 1543, 1569, 1839 |
| Eco52I | CGGCCG | 1 cut(s) | 1549 |
| Eco53kI | GAGCTC | 1 cut(s) | 660 |
| Eco57I | CTGAAG | 2 cut(s) | 1224, 1878 |
| Eco88I | CYCGRG | 4 cut(s) | 655, 937, 1477, 1810 |
| EcoICRI | GAGCTC | 1 cut(s) | 660 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1473, 1474 |
| EcoRII | CCWGG | 3 cut(s) | 322, 989, 1119 |
| EcoT14I | CCWWGG | 1 cut(s) | 1710 |
| EcoT38I | GRGCYC | 4 cut(s) | 662, 1477, 1511, 1811 |
| EgeI | GGCGCC | 2 cut(s) | 421, 577 |
| EheI | GGCGCC | 2 cut(s) | 421, 577 |
| ErhI | CCWWGG | 1 cut(s) | 1710 |
| Esp3I | CGTCTC | 2 cut(s) | 777, 1484 |
| FaeI | CATG | 3 cut(s) | 1525, 1820, 1891 |
| FaiI | YATR | 6 cut(s) | 375, 794, 1143, 1523, 1818, 1889 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 665, 697 |
| FaqI | GGGAC | 5 cut(s) | 152, 611, 1467, 1827, 1830 |
| FatI | CATG | 3 cut(s) | 1521, 1816, 1887 |
| FauI | CCCGC | 4 cut(s) | 503, 888, 905, 1580 |
| FblI | GTMKAC | 1 cut(s) | 1082 |
| FokI | GGATG | 2 cut(s) | 28, 1399 |
| FriOI | GRGCYC | 4 cut(s) | 662, 1477, 1511, 1811 |
| GlaI | GCGC | 3 cut(s) | 421, 577, 1455 |
| HaeII | RGCGCY | 2 cut(s) | 423, 579 |
| HaeIII | GGCC | 6 cut(s) | 344, 1089, 1125, 1351, 1475, 1551 |
| HgaI | GACGC | 4 cut(s) | 314, 365, 542, 794 |
| HhaI | GCGC | 3 cut(s) | 422, 578, 1456 |
| Hin1I | GRCGYC | 4 cut(s) | 420, 534, 576, 786 |
| Hin1II | CATG | 3 cut(s) | 1525, 1820, 1891 |
| Hin6I | GCGC | 3 cut(s) | 420, 576, 1454 |
| HinP1I | GCGC | 3 cut(s) | 420, 576, 1454 |
| HincII | GTYRAC | 2 cut(s) | 622, 1083 |
| HindII | GTYRAC | 2 cut(s) | 622, 1083 |
| Hpy166II | GTNNAC | 4 cut(s) | 474, 622, 1083, 1723 |
| Hpy188I | TCNGA | 7 cut(s) | 638, 718, 1049, 1204, 1393, 1613, 1668 |
| Hpy188III | TCNNGA | 6 cut(s) | 433, 585, 895, 937, 1021, 1790 |
| Hpy8I | GTNNAC | 4 cut(s) | 474, 622, 1083, 1723 |
| Hpy99I | CGWCG | 5 cut(s) | 536, 701, 965, 971, 1087 |
| HpyAV | CCTTC | 4 cut(s) | 280, 691, 985, 1594 |
| HpyCH4III | ACNGT | 7 cut(s) | 863, 1099, 1154, 1189, 1371, 1689, 1900 |
| HpyCH4IV | ACGT | 4 cut(s) | 624, 722, 960, 1796 |
| HpyCH4V | TGCA | 1 cut(s) | 1193 |
| HpyF3I | CTNAG | 5 cut(s) | 90, 1167, 1397, 1510, 1593 |
| HpySE526I | ACGT | 4 cut(s) | 624, 722, 960, 1796 |
| Hsp92I | GRCGYC | 4 cut(s) | 420, 534, 576, 786 |
| Hsp92II | CATG | 3 cut(s) | 1525, 1820, 1891 |
| HspAI | GCGC | 3 cut(s) | 420, 576, 1454 |
| KasI | GGCGCC | 2 cut(s) | 419, 575 |
| Kpn2I | TCCGGA | 1 cut(s) | 584 |
| KroI | GCCGGC | 3 cut(s) | 572, 710, 908 |
| KroNI | GCCGGC | 3 cut(s) | 574, 712, 910 |
| KspI | CCGCGG | 2 cut(s) | 342, 1434 |
| Kzo9I | GATC | 6 cut(s) | 126, 347, 587, 924, 1608, 1761 |
| LmnI | GCTCC | 9 cut(s) | 30, 302, 665, 719, 905, 953, 1073, 1393, 1806 |
| Lsp1109I | GCAGC | 3 cut(s) | 72, 84, 848 |
| LweI | GCATC | 1 cut(s) | 1293 |
| MabI | ACCWGGT | 1 cut(s) | 322 |
| MaeII | ACGT | 4 cut(s) | 624, 722, 960, 1796 |
| MaeIII | GTNAC | 4 cut(s) | 815, 941, 1012, 1642 |
| MalI | GATC | 6 cut(s) | 128, 349, 589, 926, 1610, 1763 |
| MbiI | CCGCTC | 3 cut(s) | 498, 1128, 1587 |
| MboI | GATC | 6 cut(s) | 126, 347, 587, 924, 1608, 1761 |
| MboII | GAAGA | 6 cut(s) | 4, 7, 10, 172, 1217, 1529 |
| MflI | RGATCY | 1 cut(s) | 587 |
| MhlI | GDGCHC | 4 cut(s) | 662, 1477, 1511, 1811 |
| MluCI | AATT | 2 cut(s) | 889, 1364 |
| MluI | ACGCGT | 1 cut(s) | 1438 |
| Mly113I | GGCGCC | 2 cut(s) | 420, 576 |
| MlyI | GAGTC | 7 cut(s) | 206, 419, 461, 647, 833, 839, 1489 |
| MmeI | TCCRAC | 3 cut(s) | 177, 687, 1371 |
| MreI | CGCCGGCG | 1 cut(s) | 572 |
| MroI | TCCGGA | 1 cut(s) | 584 |
| MroNI | GCCGGC | 3 cut(s) | 572, 710, 908 |
| MroXI | GAANNNNTTC | 2 cut(s) | 764, 1054 |
| MseI | TTAA | 5 cut(s) | 852, 1041, 1062, 1314, 1909 |
| MspA1I | CMGCKG | 3 cut(s) | 341, 1433, 1623 |
| MvaI | CCWGG | 3 cut(s) | 324, 991, 1121 |
| MvnI | CGCG | 6 cut(s) | 218, 341, 1433, 1440, 1454, 1770 |
| NaeI | GCCGGC | 3 cut(s) | 574, 712, 910 |
| NarI | GGCGCC | 2 cut(s) | 420, 576 |
| NdeII | GATC | 6 cut(s) | 126, 347, 587, 924, 1608, 1761 |
| NgoMIV | GCCGGC | 3 cut(s) | 572, 710, 908 |
| NlaIII | CATG | 3 cut(s) | 1525, 1820, 1891 |
| NmeAIII | GCCGAG | 3 cut(s) | 393, 472, 1527 |
| NmuCI | GTSAC | 2 cut(s) | 1012, 1642 |
| PaeR7I | CTCGAG | 2 cut(s) | 655, 937 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 420, 648, 714, 840, 957, 966 |
| PdiI | GCCGGC | 3 cut(s) | 574, 712, 910 |
| PdmI | GAANNNNTTC | 2 cut(s) | 764, 1054 |
| PfeI | GAWTC | 7 cut(s) | 220, 639, 971, 1055, 1199, 1626, 1649 |
| PflFI | GACNNNGTC | 1 cut(s) | 617 |
| PfoI | TCCNGGA | 4 cut(s) | 827, 920, 1004, 1846 |
| PleI | GAGTC | 7 cut(s) | 206, 419, 461, 647, 832, 839, 1488 |
| PluTI | GGCGCC | 2 cut(s) | 423, 579 |
| PpsI | GAGTC | 7 cut(s) | 206, 419, 461, 647, 832, 839, 1488 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1097 |
| Psp124BI | GAGCTC | 1 cut(s) | 662 |
| Psp1406I | AACGTT | 1 cut(s) | 722 |
| Psp6I | CCWGG | 3 cut(s) | 322, 989, 1119 |
| PspGI | CCWGG | 3 cut(s) | 322, 989, 1119 |
| PspOMI | GGGCCC | 1 cut(s) | 1473 |
| PspPI | GGNCC | 9 cut(s) | 343, 1087, 1092, 1123, 1473, 1474, 1543, 1569, 1839 |
| PspXI | VCTCGAGB | 1 cut(s) | 655 |
| PsuI | RGATCY | 1 cut(s) | 587 |
| PsyI | GACNNNGTC | 1 cut(s) | 617 |
| RsaI | GTAC | 7 cut(s) | 482, 860, 1070, 1172, 1676, 1682, 1707 |
| RsaNI | GTAC | 7 cut(s) | 481, 859, 1069, 1171, 1675, 1681, 1706 |
| SacI | GAGCTC | 1 cut(s) | 662 |
| SacII | CCGCGG | 2 cut(s) | 342, 1434 |
| SalI | GTCGAC | 1 cut(s) | 1081 |
| SaqAI | TTAA | 5 cut(s) | 852, 1041, 1062, 1314, 1909 |
| Sau3AI | GATC | 6 cut(s) | 126, 347, 587, 924, 1608, 1761 |
| Sau96I | GGNCC | 9 cut(s) | 343, 1087, 1092, 1123, 1473, 1474, 1543, 1569, 1839 |
| SchI | GAGTC | 7 cut(s) | 206, 419, 461, 647, 833, 839, 1489 |
| SduI | GDGCHC | 4 cut(s) | 662, 1477, 1511, 1811 |
| SexAI | ACCWGGT | 1 cut(s) | 322 |
| SfaNI | GCATC | 1 cut(s) | 1293 |
| SfcI | CTRYAG | 1 cut(s) | 691 |
| SfoI | GGCGCC | 2 cut(s) | 421, 577 |
| Sfr274I | CTCGAG | 2 cut(s) | 655, 937 |
| Sfr303I | CCGCGG | 2 cut(s) | 342, 1434 |
| SgrAI | CRCCGGYG | 1 cut(s) | 572 |
| SgrBI | CCGCGG | 2 cut(s) | 342, 1434 |
| SinI | GGWCC | 4 cut(s) | 1092, 1543, 1569, 1839 |
| SlaI | CTCGAG | 2 cut(s) | 655, 937 |
| SmaI | CCCGGG | 1 cut(s) | 1812 |
| SmlI | CTYRAG | 3 cut(s) | 64, 655, 937 |
| SmoI | CTYRAG | 3 cut(s) | 64, 655, 937 |
| Sse9I | AATT | 2 cut(s) | 889, 1364 |
| SspDI | GGCGCC | 2 cut(s) | 419, 575 |
| SspI | AATATT | 1 cut(s) | 1274 |
| SstI | GAGCTC | 1 cut(s) | 662 |
| StyI | CCWWGG | 1 cut(s) | 1710 |
| TaaI | ACNGT | 7 cut(s) | 863, 1099, 1154, 1189, 1371, 1689, 1900 |
| TaiI | ACGT | 4 cut(s) | 627, 725, 963, 1799 |
| TaqI | TCGA | 8 cut(s) | 210, 656, 927, 938, 998, 1022, 1082, 1740 |
| TaqII | GACCGA | 1 cut(s) | 1531 |
| TasI | AATT | 2 cut(s) | 889, 1364 |
| TatI | WGTACW | 2 cut(s) | 480, 1170 |
| TauI | GCSGC | 9 cut(s) | 239, 341, 344, 420, 463, 572, 1128, 1433, 1554 |
| TfiI | GAWTC | 7 cut(s) | 220, 639, 971, 1055, 1199, 1626, 1649 |
| Tru1I | TTAA | 5 cut(s) | 852, 1041, 1062, 1314, 1909 |
| Tru9I | TTAA | 5 cut(s) | 852, 1041, 1062, 1314, 1909 |
| TscAI | CASTG | 6 cut(s) | 60, 129, 1102, 1518, 1839, 1874 |
| TseFI | GTSAC | 2 cut(s) | 1012, 1642 |
| TseI | GCWGC | 3 cut(s) | 60, 72, 836 |
| Tsp45I | GTSAC | 2 cut(s) | 1012, 1642 |
| TspDTI | ATGAA | 1 cut(s) | 715 |
| TspGWI | ACGGA | 7 cut(s) | 834, 918, 966, 1086, 1475, 1589, 1661 |
| TspMI | CCCGGG | 1 cut(s) | 1810 |
| TspRI | CASTG | 6 cut(s) | 60, 129, 1102, 1518, 1839, 1874 |
| Tth111I | GACNNNGTC | 1 cut(s) | 617 |
| VpaK11BI | GGWCC | 4 cut(s) | 1092, 1543, 1569, 1839 |
| XhoI | CTCGAG | 2 cut(s) | 655, 937 |
| XmaI | CCCGGG | 1 cut(s) | 1810 |
| XmiI | GTMKAC | 1 cut(s) | 1082 |
| XmnI | GAANNNNTTC | 2 cut(s) | 764, 1054 |