Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003010

Physical Location & Seq

Genomic Coordinates Reverse (-)

947996 .. 951257

Gene Structure 3262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0011500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGCAATGGCAATGGCAAAGGCAAAGGCAGCGCGGAATGACGCAAACAGAAGCCTTGAGAGTTTATTGGACATGGACAAAATAGTGGCTGCAAAGATTTCTGTTCCACTTCAGTTGTCGAAGATGATTCCAGGCCAAGGCCTTGAATTCAACAACCTTTCCTACAGTGTAATTAAGAAGATAAAGAAAGATGGGGTTTGGATCAAGAAGGAAGCTTATCTTCTTAATGACATATCTGGTCAGGCCGTGAAAGGTGAGGTTATGGCCATTTTGGGACCTAGTGGTGCTGGAAAATCCACATTTCTCGATGCCTTGGCAGGAAGGATTGCTCAAGGAAGTCTTGAAGGCTCTGTAAGAGTCGATGGAAAAACGGTTACTACAAGCTACATGAAGATGGTTTCCTCTTATGTGATGCAAGATGACCAGCTGTTCCCGATGTTAACTGTGTTTGAGACTTTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCTCTTTCCAAGGATGAGAAGAGAAAGAGAGTCTATGAGCTCCTTGACCAGCTCGGCTTGCAGACTGCAACACATACATATATTGGTGATGAGGGGAGGAGAGGAGTCTCGGGAGGAGAAAGACGGAGGGTCTCAATTGGAATTGACATCATCCACAAACCTTCTTTGCTGTTTCTTGATGAACCAACTTCTGGTCTTGACTCCACGAGTGCTTACAGTGTTGTGGAAAAGGTGAAGGAAATAGCTCGAGGTGGTAGCATTGTGCTCATGACCATCCATCAACCTTCGTATCGTATTCAAAATCTCCTGGACCGCATGACAATCCTAGCAAGAGGAAAGCTGATATATTTGGGAAGTCCACATGGTCTGTCTGCCCACCTTTCTGGATTTGGAAGGCCAGTTCCTGATGGAGAAAACAACCTCGAGTATCTCTTGGATGTGATCAAAGAATATGATGAGTCTAATGTGGGACTAGAACCACTTGTTGTCTACCTTCGTGATGGAATCAAACCCGATCAGGTGTCAAGTACCCCTACTCCAAAAAGACTAAAGACACCACGAAGTTCTTATAAAAACACCCCTTCATCCAAGCACATCAACCTCAGGAGCAAACAATTTTCCCGTAGAAACTCGACACCTGGACCAGATTCTCGCCCATCTGATGATTATGATGATGAGGAGGACGATGAGTTTGAGGAGGATGATGAGTTTGACAACTCCCTGGAAAGGAAATCAATTCATACACCAATGCAGCACTTTGCAAGTGGTATCTATAACCCTCGTCTAGCTTCACATTTCTACAAAGACTTCTCAGTGTGGATATACCATGGTGTCAAAGGAACTCCTCGCCGCCCACCATCATGGACTCCTGCTAGAACTCCGGGAAGGACCCCAGGAAAGACACCAGTAATCTCGGTGTCAGGAATAAGAAGTGTTGTTTCAAGCCAATATGCAACACCTCGGCACTACCCTCCTATGCCTAGTAGTACTAAAGCCCCTGTTGTCTACAGCCCTTCCAACAATGACTCTTCATATGGACCATCATTTGAAGAGTTCGAGATGGAAGAAGATGAGCTTGATGAGATAGAGCTCGGGCCTAAGTTTGCAAACCCCTGGCTTCGTGAGGTTGCAGTCCTCTCATGGCGTACAACACTCAATGTGGTTCGTACCCCTGAACTCTTCCTCTCACGAGAGATTGTGTTGGCTGTCATGGCACTCGTTCTATCTTCCCTTTTCCATAACCTACATGCAGAGTCCTTCAAAAATGTAAACAGGCTTCTAAACTTCTACATCTTTGCTGTTTGCCTGATCTTCTTTTCCTCCAATGATGCTGTCCCGACTTTCATCCAAGAAAGGTTCATTTTCATCAGGGAAACTTCTCATAATGCTTACCGTGCTTCTTCCTACGTCATCTCTTCCCTCATTGTTTACCTCCCGTTTTTCGCCATTCAAGCTCTCACATTTGCTGCCATAACCAAACTCATGCTTGAGCTCAGAAGCAGTCTTTTCTATTTTTGGATAATCTTGTATGCCTCACTTATAACCACCAATGCTTATGTCATGCTTGTGAGTGCCCTGGTTCCTAGTTACATCACTGGATATGCTGTTGTGATAGCCACCACAGCTCTCTTCTTTCTCACTTGCGGCTTTTTCTTGAAACGTACTCAGATCCCACATTACTGGGTCTGGGTGCACTACATCTCCGCAATTAAGTACCCATTTGAGGCAATGCTAACCAATGAATTCCAAGGAATACGTTGCTACTCTGGCAATCTAGCCGATCTTTCACCTGGGCCTTTAGGAAATGTGAAGTTGAGTAAAGTGCACAAAGACACAGAATCGCTAAGAGGTTGCCAGCTGATTGGACAAGATGTTATAGAGTCGATGGATATCAATCACGATAACATCTGGTACGATGTTGGAATCTTGCTAGCTTGGGGTGTTCTATACCGGATCCTCTTCTACATGGTCCTCAGATTCTATTCCAAGAATGAGAGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BURP

Protein Analysis

830

Amino Acids

93.42

Weight (kDa)

8.27

Isoelectric Point (pI)

43.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	75 - 227	6.4e-29	ABC transporter
ABC2_membrane	PF01061	538 - 745	1.6e-38	ABC-2 type transporter
ABC2_membrane_3	PF12698	580 - 817	7.5e-07	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23760 AT1G70370 AT1G70370
fragaria_vesca	FvH4_4g34470 FvH4_5g05190
malus_domestica	MD06G1175800.v1.1 MD06G1176400.v1.1 MD13G1092000.v1.1 MD16G1092600.v1.1
prunus_persica	Prupe.1G253700_v2.0.a1 Prupe.1G253800_v2.0.a1 Prupe.1G253800_v2.0.a1 Prupe.5G175100_v2.0.a1
pyrus_communis	pycom06g15640 pycom13g08000 pycom16g07900
rosa_chinensis	RchiOBHm_Chr4g0443861 RchiOBHm_Chr7g0193731
rosa_laevigata	RLG00000004248 RLG00000005883
rosa_multiflora	Rmu_co8475093.1_g000001 Rmu_sc0001436.1_g000011 Rmu_sc0005632.1_g000009 Rmu_sc0019062.1_g000003
rosa_roxburghii	Rroxscaffold_3G00261870 Rroxscaffold_5G00384420
rosa_rugosa	Rorug04G0347800.1 Rorug07G0011500
rosa_samantha	Rh4AG408400 Rh4BG419400 Rh4CG433400 Rh4DG414400 Rh7AG138400 Rh7BG138600 Rh7CG142200 Rh7DG139700
rosa_wichuraiana	Rw4G035060 Rw7G011790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1059, 2030
AccB7I	CCANNNNNTGG	1 cut(s)	680
AccI	GTMKAC	2 cut(s)	978, 1494
AccII	CGCG	1 cut(s)	34
AciI	CCGC	5 cut(s)	34, 802, 1339, 2133, 2193
AclWI	GGATC	4 cut(s)	209, 2152, 2437, 2450
AcoI	YGGCCR	1 cut(s)	264
AcsI	RAATTY	2 cut(s)	146, 2231
AcuI	CTGAAG	1 cut(s)	95
AfaI	GTAC	7 cut(s)	1018, 1477, 1636, 1657, 2152, 2204, 2402
AfiI	CCNNNNNNNGG	4 cut(s)	137, 680, 1215, 2212
AgsI	TTSAA	9 cut(s)	146, 151, 344, 788, 1431, 1538, 1750, 1940, 2146
AhdI	GACNNNNNGTC	1 cut(s)	617
AjnI	CCWGG	8 cut(s)	130, 795, 1126, 1209, 1381, 1601, 2064, 2278
AloI	GAACNNNNNNTCC	2 cut(s)	873, 905
Alw21I	GWGCWC	6 cut(s)	531, 756, 1581, 1983, 2184, 2316
Alw26I	GTCTC	3 cut(s)	446, 601, 625
Alw44I	GTGCAC	2 cut(s)	2180, 2312
AlwI	GGATC	4 cut(s)	209, 2152, 2437, 2450
AlwNI	CAGNNNCTG	1 cut(s)	893
Ama87I	CYCGRG	4 cut(s)	598, 735, 911, 1580
AoxI	GGCC	7 cut(s)	133, 139, 243, 264, 884, 1583, 2282
ApaLI	GTGCAC	2 cut(s)	2180, 2312
ApeKI	GCWGC	5 cut(s)	29, 89, 467, 1240, 1955
ApoI	RAATTY	2 cut(s)	146, 2231
ArsI	GACNNNNNNTTYG	2 cut(s)	1163, 1195
AspLEI	GCGC	1 cut(s)	34
AspS9I	GGNCC	8 cut(s)	275, 799, 1130, 1377, 1526, 1583, 2282, 2458
AsuC2I	CCSGG	1 cut(s)	1371
AsuHPI	GGTGA	4 cut(s)	266, 587, 733, 2268
AsuNHI	GCTAGC	1 cut(s)	2419
AvaI	CYCGRG	4 cut(s)	598, 735, 911, 1580
AvaII	GGWCC	6 cut(s)	275, 799, 1130, 1377, 1526, 2458
AxyI	CCTNAGG	1 cut(s)	1091
BaeGI	GKGCMC	3 cut(s)	2065, 2184, 2316
BaeI	ACNNNNGTAYC	2 cut(s)	761, 794
BalI	TGGCCA	1 cut(s)	266
BamHI	GGATCC	1 cut(s)	2442
BanII	GRGCYC	3 cut(s)	531, 1581, 1983
BarI	GAAGNNNNNNTAC	2 cut(s)	1749, 1781
BauI	CACGAG	2 cut(s)	694, 1677
Bbv12I	GWGCWC	6 cut(s)	531, 756, 1581, 1983, 2184, 2316
BbvCI	CCTCAGC	1 cut(s)	471
BbvI	GCAGC	5 cut(s)	41, 76, 479, 1252, 1942
BceAI	ACGGC	1 cut(s)	230
BciT130I	CCWGG	8 cut(s)	132, 797, 1128, 1211, 1383, 1603, 2066, 2280
BclI	TGATCA	1 cut(s)	930
BcnI	CCSGG	1 cut(s)	1371
BcoDI	GTCTC	3 cut(s)	446, 601, 625
BfaI	CTAG	9 cut(s)	279, 815, 962, 1274, 1362, 1470, 2073, 2264, 2420
BfmI	CTRYAG	2 cut(s)	163, 1495
BisI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
BlsI	GCNGC	7 cut(s)	31, 91, 469, 1242, 1340, 1957, 2135
BmcAI	AGTACT	1 cut(s)	1477
Bme1390I	CCNGG	9 cut(s)	132, 797, 1128, 1211, 1371, 1383, 1603, 2066, 2280
Bme18I	GGWCC	6 cut(s)	275, 799, 1130, 1377, 1526, 2458
BmeRI	GACNNNNNGTC	1 cut(s)	617
BmeT110I	CYCGRG	4 cut(s)	598, 735, 911, 1580
BmgT120I	GGNCC	8 cut(s)	275, 799, 1130, 1377, 1526, 1583, 2282, 2458
BmiI	GGNNCC	4 cut(s)	276, 1379, 2070, 2444
BmrFI	CCNGG	9 cut(s)	132, 797, 1128, 1211, 1371, 1383, 1603, 2066, 2280
BmrI	ACTGGG	1 cut(s)	2179
BmsI	GCATC	3 cut(s)	298, 402, 1807
BmtI	GCTAGC	1 cut(s)	2423
BmuI	ACTGGG	1 cut(s)	2179
Bpu10I	CCTNAGC	1 cut(s)	471
BpuEI	CTTGAG	3 cut(s)	77, 315, 1997
BpuMI	CCSGG	1 cut(s)	1371
BsaBI	GATNNNNATC	2 cut(s)	2378, 2382
BsaI	GGTCTC	1 cut(s)	625
BsaWI	WCCGGW	1 cut(s)	2439
BsaXI	ACNNNNNCTCC	4 cut(s)	1009, 1039, 2174, 2204
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 680, 1215, 2212
Bse1I	ACTGG	4 cut(s)	887, 1394, 2089, 2174
Bse21I	CCTNAGG	1 cut(s)	1091
Bse3DI	GCAATG	3 cut(s)	12, 18, 2223
Bse8I	GATNNNNATC	2 cut(s)	2378, 2382
BseBI	CCWGG	8 cut(s)	132, 797, 1128, 1211, 1383, 1603, 2066, 2280
BseGI	GGATG	7 cut(s)	508, 639, 762, 931, 1073, 1195, 1833
BseJI	GATNNNNATC	2 cut(s)	2378, 2382
BseLI	CCNNNNNNNGG	4 cut(s)	137, 680, 1215, 2212
BseMI	GCAATG	3 cut(s)	12, 18, 2223
BseMII	CTCAG	6 cut(s)	462, 1105, 1314, 1996, 2168, 2476
BseNI	ACTGG	4 cut(s)	887, 1394, 2089, 2174
BseRI	GAGGAG	6 cut(s)	601, 606, 618, 1181, 1199, 1323
BseSI	GKGCMC	3 cut(s)	2065, 2184, 2316
BseXI	GCAGC	5 cut(s)	41, 76, 479, 1252, 1942
Bsh1236I	CGCG	1 cut(s)	34
BshFI	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
BsiHKAI	GWGCWC	6 cut(s)	531, 756, 1581, 1983, 2184, 2316
BsiHKCI	CYCGRG	4 cut(s)	598, 735, 911, 1580
BsiSI	CCGG	2 cut(s)	1370, 2440
BslFI	GGGAC	3 cut(s)	288, 972, 1808
BslI	CCNNNNNNNGG	4 cut(s)	137, 680, 1215, 2212
BsmAI	GTCTC	3 cut(s)	446, 601, 625
BsmFI	GGGAC	3 cut(s)	288, 972, 1808
BsnI	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
Bso31I	GGTCTC	1 cut(s)	625
BsoBI	CYCGRG	4 cut(s)	598, 735, 911, 1580
Bsp1286I	GDGCHC	7 cut(s)	531, 756, 1581, 1983, 2065, 2184, 2316
Bsp143I	GATC	7 cut(s)	201, 930, 1003, 1797, 2157, 2269, 2442
Bsp19I	CCATGG	1 cut(s)	1315
BspACI	CCGC	5 cut(s)	34, 802, 1339, 2133, 2193
BspANI	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
BspCNI	CTCAG	6 cut(s)	463, 1104, 1313, 1995, 2167, 2475
BspFNI	CGCG	1 cut(s)	34
BspHI	TCATGA	1 cut(s)	756
BspLI	GGNNCC	4 cut(s)	276, 1379, 2070, 2444
BspOI	GCTAGC	1 cut(s)	2423
BspPI	GGATC	4 cut(s)	209, 2152, 2437, 2450
BspTNI	GGTCTC	1 cut(s)	625
BsrDI	GCAATG	3 cut(s)	12, 18, 2223
BsrI	ACTGG	4 cut(s)	887, 1394, 2089, 2174
BssMI	GATC	7 cut(s)	201, 930, 1003, 1797, 2157, 2269, 2442
BssSI	CACGAG	2 cut(s)	694, 1677
BssT1I	CCWWGG	5 cut(s)	136, 312, 498, 1315, 2236
Bst2BI	CACGAG	2 cut(s)	694, 1677
Bst2UI	CCWGG	8 cut(s)	132, 797, 1128, 1211, 1383, 1603, 2066, 2280
Bst4CI	ACNGT	5 cut(s)	167, 373, 445, 707, 1883
Bst6I	CTCTTC	7 cut(s)	503, 1522, 1533, 1673, 1909, 2123, 2453
BstC8I	GCNNGC	3 cut(s)	548, 2345, 2421
BstDEI	CTNAG	8 cut(s)	471, 1091, 1300, 1587, 1982, 2154, 2333, 2462
BstDSI	CCRYGG	1 cut(s)	1315
BstF5I	GGATG	7 cut(s)	508, 639, 762, 931, 1073, 1195, 1833
BstFNI	CGCG	1 cut(s)	34
BstHHI	GCGC	1 cut(s)	34
BstKTI	GATC	7 cut(s)	204, 933, 1006, 1800, 2160, 2272, 2445
BstMAI	GTCTC	3 cut(s)	446, 601, 625
BstMBI	GATC	7 cut(s)	201, 930, 1003, 1797, 2157, 2269, 2442
BstMWI	GCNNNNNNNGC	7 cut(s)	29, 547, 1700, 1883, 1940, 2111, 2256
BstNI	CCWGG	8 cut(s)	132, 797, 1128, 1211, 1383, 1603, 2066, 2280
BstNSI	RCATGY	1 cut(s)	1739
BstSCI	CCNGG	9 cut(s)	130, 795, 1126, 1209, 1369, 1381, 1601, 2064, 2278
BstSFI	CTRYAG	2 cut(s)	163, 1495
BstSLI	GKGCMC	3 cut(s)	2065, 2184, 2316
BstUI	CGCG	1 cut(s)	34
BstV1I	GCAGC	5 cut(s)	41, 76, 479, 1252, 1942
BstX2I	RGATCY	2 cut(s)	2157, 2442
BstXI	CCANNNNNNTGG	4 cut(s)	872, 1350, 2169, 2351
BstYI	RGATCY	2 cut(s)	2157, 2442
Bsu36I	CCTNAGG	1 cut(s)	1091
BsuRI	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
BtgI	CCRYGG	1 cut(s)	1315
BtsCI	GGATG	7 cut(s)	508, 639, 762, 931, 1073, 1195, 1833
BtsIMutI	CAGTG	4 cut(s)	172, 712, 1308, 2082
Cac8I	GCNNGC	3 cut(s)	548, 2345, 2421
CaiI	CAGNNNCTG	1 cut(s)	893
CciI	TCATGA	1 cut(s)	756
CfoI	GCGC	1 cut(s)	34
Cfr13I	GGNCC	8 cut(s)	275, 799, 1130, 1377, 1526, 1583, 2282, 2458
CseI	GACGC	1 cut(s)	50
Csp6I	GTAC	7 cut(s)	1017, 1476, 1635, 1656, 2151, 2203, 2401
CspCI	CAANNNNNGTGG	2 cut(s)	96, 131
CviQI	GTAC	7 cut(s)	1017, 1476, 1635, 1656, 2151, 2203, 2401
DdeI	CTNAG	8 cut(s)	471, 1091, 1300, 1587, 1982, 2154, 2333, 2462
DpnI	GATC	7 cut(s)	203, 932, 1005, 1799, 2159, 2271, 2444
DpnII	GATC	7 cut(s)	201, 930, 1003, 1797, 2157, 2269, 2442
DriI	GACNNNNNGTC	1 cut(s)	617
EaeI	YGGCCR	1 cut(s)	264
Eam1104I	CTCTTC	7 cut(s)	503, 1522, 1533, 1673, 1909, 2123, 2453
Eam1105I	GACNNNNNGTC	1 cut(s)	617
EarI	CTCTTC	7 cut(s)	503, 1522, 1533, 1673, 1909, 2123, 2453
Ecl136II	GAGCTC	3 cut(s)	529, 1579, 1981
Eco130I	CCWWGG	5 cut(s)	136, 312, 498, 1315, 2236
Eco147I	AGGCCT	1 cut(s)	141
Eco24I	GRGCYC	3 cut(s)	531, 1581, 1983
Eco31I	GGTCTC	1 cut(s)	625
Eco32I	GATATC	1 cut(s)	2380
Eco47I	GGWCC	6 cut(s)	275, 799, 1130, 1377, 1526, 2458
Eco53kI	GAGCTC	3 cut(s)	529, 1579, 1981
Eco57I	CTGAAG	1 cut(s)	95
Eco81I	CCTNAGG	1 cut(s)	1091
Eco88I	CYCGRG	4 cut(s)	598, 735, 911, 1580
EcoICRI	GAGCTC	3 cut(s)	529, 1579, 1981
EcoO109I	RGGNCCY	2 cut(s)	275, 1377
EcoRI	GAATTC	2 cut(s)	146, 2231
EcoRII	CCWGG	8 cut(s)	130, 795, 1126, 1209, 1381, 1601, 2064, 2278
EcoRV	GATATC	1 cut(s)	2380
EcoT14I	CCWWGG	5 cut(s)	136, 312, 498, 1315, 2236
EcoT38I	GRGCYC	3 cut(s)	531, 1581, 1983
ErhI	CCWWGG	5 cut(s)	136, 312, 498, 1315, 2236
FalI	AAGNNNNNCTT	6 cut(s)	204, 236, 324, 356, 1548, 1580
FaqI	GGGAC	3 cut(s)	288, 972, 1808
FauNDI	CATATG	1 cut(s)	1522
FbaI	TGATCA	1 cut(s)	930
FblI	GTMKAC	2 cut(s)	978, 1494
Fnu4HI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
FokI	GGATG	7 cut(s)	515, 626, 749, 938, 1060, 1202, 1820
FriOI	GRGCYC	3 cut(s)	531, 1581, 1983
Fsp4HI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
FspBI	CTAG	9 cut(s)	279, 815, 962, 1274, 1362, 1470, 2073, 2264, 2420
GlaI	GCGC	1 cut(s)	33
GluI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
HaeIII	GGCC	7 cut(s)	135, 141, 245, 266, 886, 1585, 2284
HapII	CCGG	2 cut(s)	1370, 2440
HgaI	GACGC	1 cut(s)	50
HhaI	GCGC	1 cut(s)	34
Hin6I	GCGC	1 cut(s)	32
HinP1I	GCGC	1 cut(s)	32
HincII	GTYRAC	1 cut(s)	441
HindII	GTYRAC	1 cut(s)	441
HindIII	AAGCTT	1 cut(s)	213
HpaI	GTTAAC	1 cut(s)	441
HpaII	CCGG	2 cut(s)	1370, 2440
HphI	GGTGA	4 cut(s)	266, 587, 733, 2268
Hpy166II	GTNNAC	8 cut(s)	441, 848, 979, 1495, 1759, 1918, 2182, 2314
Hpy188I	TCNGA	4 cut(s)	1150, 1985, 2157, 2465
Hpy8I	GTNNAC	8 cut(s)	441, 848, 979, 1495, 1759, 1918, 2182, 2314
HpyCH4III	ACNGT	5 cut(s)	167, 373, 445, 707, 1883
HpyCH4IV	ACGT	3 cut(s)	1896, 2149, 2245
HpyF10VI	GCNNNNNNNGC	7 cut(s)	29, 547, 1700, 1883, 1940, 2111, 2256
HpyF3I	CTNAG	8 cut(s)	471, 1091, 1300, 1587, 1982, 2154, 2333, 2462
HpySE526I	ACGT	3 cut(s)	1896, 2149, 2245
HspAI	GCGC	1 cut(s)	32
Ksp22I	TGATCA	1 cut(s)	930
KspAI	GTTAAC	1 cut(s)	441
Kzo9I	GATC	7 cut(s)	201, 930, 1003, 1797, 2157, 2269, 2442
LmnI	GCTCC	2 cut(s)	534, 1095
Lsp1109I	GCAGC	5 cut(s)	41, 76, 479, 1252, 1942
LweI	GCATC	3 cut(s)	298, 402, 1807
MaeI	CTAG	9 cut(s)	279, 815, 962, 1274, 1362, 1470, 2073, 2264, 2420
MaeII	ACGT	3 cut(s)	1896, 2149, 2245
MaeIII	GTNAC	2 cut(s)	373, 2075
MalI	GATC	7 cut(s)	203, 932, 1005, 1799, 2159, 2271, 2444
MboI	GATC	7 cut(s)	201, 930, 1003, 1797, 2157, 2269, 2442
MfeI	CAATTG	1 cut(s)	624
MflI	RGATCY	2 cut(s)	2157, 2442
MhlI	GDGCHC	7 cut(s)	531, 756, 1581, 1983, 2065, 2184, 2316
MlsI	TGGCCA	1 cut(s)	266
MluCI	AATT	8 cut(s)	146, 171, 624, 630, 1103, 1224, 2196, 2231
MluNI	TGGCCA	1 cut(s)	266
MlyI	GAGTC	9 cut(s)	366, 528, 603, 683, 956, 1348, 1508, 1751, 2378
MmeI	TCCRAC	2 cut(s)	1530, 2389
Mox20I	TGGCCA	1 cut(s)	266
MscI	TGGCCA	1 cut(s)	266
MseI	TTAA	4 cut(s)	174, 225, 440, 2199
MslI	CAYNNNNRTG	3 cut(s)	392, 1348, 2054
Msp20I	TGGCCA	1 cut(s)	266
MspA1I	CMGCKG	3 cut(s)	427, 470, 2347
MspI	CCGG	2 cut(s)	1370, 2440
MspR9I	CCNGG	9 cut(s)	132, 797, 1128, 1211, 1371, 1383, 1603, 2066, 2280
MunI	CAATTG	1 cut(s)	624
MvaI	CCWGG	8 cut(s)	132, 797, 1128, 1211, 1383, 1603, 2066, 2280
MvnI	CGCG	1 cut(s)	34
MwoI	GCNNNNNNNGC	7 cut(s)	29, 547, 1700, 1883, 1940, 2111, 2256
NciI	CCSGG	1 cut(s)	1371
NcoI	CCATGG	1 cut(s)	1315
NdeI	CATATG	1 cut(s)	1522
NdeII	GATC	7 cut(s)	201, 930, 1003, 1797, 2157, 2269, 2442
NheI	GCTAGC	1 cut(s)	2419
NlaIV	GGNNCC	4 cut(s)	276, 1379, 2070, 2444
NmeAIII	GCCGAG	2 cut(s)	522, 1429
NspI	RCATGY	1 cut(s)	1739
PaeR7I	CTCGAG	2 cut(s)	735, 911
PagI	TCATGA	1 cut(s)	756
PceI	AGGCCT	1 cut(s)	141
PfeI	GAWTC	6 cut(s)	127, 993, 1136, 2327, 2412, 2466
PflMI	CCANNNNNTGG	1 cut(s)	680
PfoI	TCCNGGA	2 cut(s)	795, 1369
PkrI	GCNGC	7 cut(s)	31, 91, 469, 1242, 1340, 1957, 2135
PleI	GAGTC	9 cut(s)	365, 527, 602, 683, 955, 1348, 1508, 1750, 2377
PpsI	GAGTC	9 cut(s)	365, 527, 602, 683, 955, 1348, 1508, 1750, 2377
PpuMI	RGGWCCY	2 cut(s)	275, 1377
PsiI	TTATAA	2 cut(s)	1059, 2030
Psp124BI	GAGCTC	3 cut(s)	531, 1581, 1983
Psp5II	RGGWCCY	2 cut(s)	275, 1377
Psp6I	CCWGG	8 cut(s)	130, 795, 1126, 1209, 1381, 1601, 2064, 2278
PspGI	CCWGG	8 cut(s)	130, 795, 1126, 1209, 1381, 1601, 2064, 2278
PspN4I	GGNNCC	4 cut(s)	276, 1379, 2070, 2444
PspPI	GGNCC	8 cut(s)	275, 799, 1130, 1377, 1526, 1583, 2282, 2458
PspPPI	RGGWCCY	2 cut(s)	275, 1377
PspXI	VCTCGAGB	2 cut(s)	735, 911
PstNI	CAGNNNCTG	1 cut(s)	893
PsuI	RGATCY	2 cut(s)	2157, 2442
PvuII	CAGCTG	3 cut(s)	427, 470, 2347
RsaI	GTAC	7 cut(s)	1018, 1477, 1636, 1657, 2152, 2204, 2402
RsaNI	GTAC	7 cut(s)	1017, 1476, 1635, 1656, 2151, 2203, 2401
RseI	CAYNNNNRTG	3 cut(s)	392, 1348, 2054
SacI	GAGCTC	3 cut(s)	531, 1581, 1983
SaqAI	TTAA	4 cut(s)	174, 225, 440, 2199
SatI	GCNGC	7 cut(s)	30, 90, 468, 1241, 1339, 1956, 2134
Sau3AI	GATC	7 cut(s)	201, 930, 1003, 1797, 2157, 2269, 2442
Sau96I	GGNCC	8 cut(s)	275, 799, 1130, 1377, 1526, 1583, 2282, 2458
ScaI	AGTACT	1 cut(s)	1477
SchI	GAGTC	9 cut(s)	366, 528, 603, 683, 956, 1348, 1508, 1751, 2378
ScrFI	CCNGG	9 cut(s)	132, 797, 1128, 1211, 1371, 1383, 1603, 2066, 2280
SduI	GDGCHC	7 cut(s)	531, 756, 1581, 1983, 2065, 2184, 2316
SfaNI	GCATC	3 cut(s)	298, 402, 1807
SfcI	CTRYAG	2 cut(s)	163, 1495
Sfr274I	CTCGAG	2 cut(s)	735, 911
SinI	GGWCC	6 cut(s)	275, 799, 1130, 1377, 1526, 2458
SlaI	CTCGAG	2 cut(s)	735, 911
SmiMI	CAYNNNNRTG	3 cut(s)	392, 1348, 2054
SmlI	CTYRAG	5 cut(s)	56, 330, 735, 911, 1976
SmoI	CTYRAG	5 cut(s)	56, 330, 735, 911, 1976
Sse9I	AATT	8 cut(s)	146, 171, 624, 630, 1103, 1224, 2196, 2231
SseBI	AGGCCT	1 cut(s)	141
SsiI	CCGC	5 cut(s)	34, 802, 1339, 2133, 2193
SspMI	CTAG	9 cut(s)	279, 815, 962, 1274, 1362, 1470, 2073, 2264, 2420
SstI	GAGCTC	3 cut(s)	531, 1581, 1983
StuI	AGGCCT	1 cut(s)	141
StyD4I	CCNGG	9 cut(s)	130, 795, 1126, 1209, 1369, 1381, 1601, 2064, 2278
StyI	CCWWGG	5 cut(s)	136, 312, 498, 1315, 2236
TaaI	ACNGT	5 cut(s)	167, 373, 445, 707, 1883
TaiI	ACGT	3 cut(s)	1899, 2152, 2248
TaqI	TCGA	8 cut(s)	119, 306, 360, 736, 912, 1121, 1545, 2372
TasI	AATT	8 cut(s)	146, 171, 624, 630, 1103, 1224, 2196, 2231
TatI	WGTACW	1 cut(s)	1475
TauI	GCSGC	2 cut(s)	1341, 2136
TfiI	GAWTC	6 cut(s)	127, 993, 1136, 2327, 2412, 2466
Tru1I	TTAA	4 cut(s)	174, 225, 440, 2199
Tru9I	TTAA	4 cut(s)	174, 225, 440, 2199
TscAI	CASTG	4 cut(s)	172, 712, 1308, 2089
TseI	GCWGC	5 cut(s)	29, 89, 467, 1240, 1955
TspGWI	ACGGA	1 cut(s)	628
TspRI	CASTG	4 cut(s)	172, 712, 1308, 2089
Van91I	CCANNNNNTGG	1 cut(s)	680
VneI	GTGCAC	2 cut(s)	2180, 2312
VpaK11BI	GGWCC	6 cut(s)	275, 799, 1130, 1377, 1526, 2458
XapI	RAATTY	2 cut(s)	146, 2231
XceI	RCATGY	1 cut(s)	1739
XhoI	CTCGAG	2 cut(s)	735, 911
XmiI	GTMKAC	2 cut(s)	978, 1494
XspI	CTAG	9 cut(s)	279, 815, 962, 1274, 1362, 1470, 2073, 2264, 2420
ZrmI	AGTACT	1 cut(s)	1477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.