Prupe.1G560800_v2.0.a1

Belongs to the FBPase class 1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
45786677 .. 45788261
1585 bp
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UTR
Exon/CDS
Intron
Prupe.1G560800.1

Sequence Viewer

Length: 219 bp
ATGGATAATGCTGCTGATGCTCAAAGAACTGATTTGATGACCATAACTCGTTATGCTCTTAACGAGCAGTCCAAGCATCCGGAGGCATGCGGCGATTTCACCATCTTGCTCAACCACATTGTTCTCGGTTGCAAATTTGTCTGCTCCGCTGTTAGCAAGGCAGGTCTTGCAAAAGTAATTGGACTTGCTGGAGAGACCAATGTTCAGAGTTCTTTATGA

Protein Analysis

73

Amino Acids

7.65

Weight (kDa)

6.01

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022506)

Species Orthologous Gene IDs
prunus_persica Prupe.1G560800_v2.0.a1
rosa_multiflora Rmu_sc0011044.1_g000003
rosa_samantha Rh6CG213200
rosa_wichuraiana Rw6G018050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 152
AccIII TCCGGA 1 cut(s) 79
AciI CCGC 2 cut(s) 90, 147
AcsI RAATTY 1 cut(s) 134
Alw26I GTCTC 1 cut(s) 188
Aor13HI TCCGGA 1 cut(s) 79
ApeKI GCWGC 1 cut(s) 11
ApoI RAATTY 1 cut(s) 134
AsuHPI GGTGA 1 cut(s) 91
BccI CCATC 1 cut(s) 110
BcoDI GTCTC 1 cut(s) 188
BfuAI ACCTGC 1 cut(s) 152
BisI GCNGC 2 cut(s) 12, 91
BlsI GCNGC 2 cut(s) 13, 92
BmsI GCATC 2 cut(s) 7, 85
BpmI CTGGAG 1 cut(s) 210
BsaI GGTCTC 1 cut(s) 188
BsaWI WCCGGW 1 cut(s) 79
BseAI TCCGGA 1 cut(s) 79
BseGI GGATG 1 cut(s) 76
BsiSI CCGG 1 cut(s) 80
BsmAI GTCTC 1 cut(s) 188
Bso31I GGTCTC 1 cut(s) 188
Bsp13I TCCGGA 1 cut(s) 79
BspACI CCGC 2 cut(s) 90, 147
BspEI TCCGGA 1 cut(s) 79
BspMI ACCTGC 1 cut(s) 152
BspTNI GGTCTC 1 cut(s) 188
BstAPI GCANNNNNTGC 1 cut(s) 167
BstC8I GCNNGC 1 cut(s) 88
BstF5I GGATG 1 cut(s) 76
BstMAI GTCTC 1 cut(s) 188
BstMWI GCNNNNNNNGC 3 cut(s) 17, 73, 167
BstNSI RCATGY 1 cut(s) 90
BtsCI GGATG 1 cut(s) 76
BveI ACCTGC 1 cut(s) 152
Cac8I GCNNGC 1 cut(s) 88
CviAII CATG 1 cut(s) 87
Eco31I GGTCTC 1 cut(s) 188
FaeI CATG 1 cut(s) 90
FaiI YATR 4 cut(s) 44, 54, 88, 217
FatI CATG 1 cut(s) 86
Fnu4HI GCNGC 2 cut(s) 12, 91
FokI GGATG 1 cut(s) 63
Fsp4HI GCNGC 2 cut(s) 12, 91
GluI GCNGC 2 cut(s) 12, 91
GsuI CTGGAG 1 cut(s) 210
HapII CCGG 1 cut(s) 80
Hin1II CATG 1 cut(s) 90
HpaII CCGG 1 cut(s) 80
HphI GGTGA 1 cut(s) 91
Hpy188I TCNGA 1 cut(s) 207
Hpy188III TCNNGA 1 cut(s) 80
HpyCH4V TGCA 2 cut(s) 132, 170
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 73, 167
Hsp92II CATG 1 cut(s) 90
Kpn2I TCCGGA 1 cut(s) 79
LmnI GCTCC 1 cut(s) 149
LpnPI CCDG 3 cut(s) 93, 147, 174
LweI GCATC 2 cut(s) 7, 85
MluCI AATT 2 cut(s) 134, 177
MnlI CCTC 1 cut(s) 76
MroI TCCGGA 1 cut(s) 79
MseI TTAA 1 cut(s) 60
MspA1I CMGCKG 1 cut(s) 149
MspI CCGG 1 cut(s) 80
MwoI GCNNNNNNNGC 3 cut(s) 17, 73, 167
NlaIII CATG 1 cut(s) 90
NspI RCATGY 1 cut(s) 90
PaeI GCATGC 1 cut(s) 90
PkrI GCNGC 2 cut(s) 13, 92
SaqAI TTAA 1 cut(s) 60
SatI GCNGC 2 cut(s) 12, 91
SetI ASST 1 cut(s) 166
SfaNI GCATC 2 cut(s) 7, 85
SphI GCATGC 1 cut(s) 90
Sse9I AATT 2 cut(s) 134, 177
SsiI CCGC 2 cut(s) 90, 147
TasI AATT 2 cut(s) 134, 177
TauI GCSGC 1 cut(s) 93
Tru1I TTAA 1 cut(s) 60
Tru9I TTAA 1 cut(s) 60
TseI GCWGC 1 cut(s) 11
XapI RAATTY 1 cut(s) 134
XceI RCATGY 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.