Prupe.2G000900_v2.0.a1

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
198418 .. 200087
1670 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G000900.1

Sequence Viewer

Length: 366 bp
ATGAAACTTTCCAGAACACCATGCCCAATTCCAACCACGGCTGCTCTCATTGGCTGCCTTCTCTTACTCGCTACAGTTTCAGAGGCCACATTATCTTGCAGCGATGTAACCAAGGACCTTAGACCGTGCCTGAGCTACCTAGTAAATGGTTCAGGGAAGCCACCTGCTGCATGTTGTGCTGGAGCCTCAGCCCTCGCATCTGCTGCATCAACCTCTGCCGATAAGAAAGCTGCATGCGGCTGTATTAAGTCAGCAGCCCAGAAAATAAATCTCAAAGTTCAATTGGCCCAAGCTCTTCCAGGGAACTGTGGAATCAACTTGCCTTTCACTATTTCACCAAATACTGACTGTTCAAAGGTTGGTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

12.1

Weight (kDa)

8.88

Isoelectric Point (pI)

28.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022021)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18370
malus_domestica MD00G1187200.v1.1
prunus_persica Prupe.2G000900_v2.0.a1
pyrus_communis pycom02g26910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 172
Acc36I ACCTGC 1 cut(s) 172
AciI CCGC 1 cut(s) 237
AgsI TTSAA 2 cut(s) 281, 354
AjnI CCWGG 1 cut(s) 298
AluBI AGCT 3 cut(s) 135, 230, 293
AluI AGCT 3 cut(s) 135, 230, 293
AoxI GGCC 2 cut(s) 84, 285
ApeKI GCWGC 7 cut(s) 41, 54, 99, 167, 203, 230, 254
AspS9I GGNCC 2 cut(s) 115, 286
AsuHPI GGTGA 1 cut(s) 327
AvaII GGWCC 1 cut(s) 115
BbvCI CCTCAGC 1 cut(s) 187
BbvI GCAGC 7 cut(s) 28, 41, 111, 154, 190, 217, 266
BceAI ACGGC 1 cut(s) 54
BciT130I CCWGG 1 cut(s) 300
BfaI CTAG 1 cut(s) 140
BfmI CTRYAG 1 cut(s) 72
BfuAI ACCTGC 1 cut(s) 172
BisI GCNGC 8 cut(s) 42, 55, 100, 168, 204, 231, 238, 255
BlsI GCNGC 8 cut(s) 43, 56, 101, 169, 205, 232, 239, 256
Bme1390I CCNGG 1 cut(s) 300
Bme18I GGWCC 1 cut(s) 115
BmgT120I GGNCC 2 cut(s) 115, 286
BmiI GGNNCC 1 cut(s) 184
BmrFI CCNGG 1 cut(s) 300
BmsI GCATC 2 cut(s) 206, 215
BpmI CTGGAG 1 cut(s) 201
Bpu10I CCTNAGC 2 cut(s) 131, 187
BsaJI CCNNGG 3 cut(s) 36, 111, 299
BseBI CCWGG 1 cut(s) 300
BseDI CCNNGG 3 cut(s) 36, 111, 299
BseMII CTCAG 2 cut(s) 122, 201
BseXI GCAGC 7 cut(s) 28, 41, 111, 154, 190, 217, 266
BshFI GGCC 2 cut(s) 86, 287
BsnI GGCC 2 cut(s) 86, 287
BspACI CCGC 1 cut(s) 237
BspANI GGCC 2 cut(s) 86, 287
BspCNI CTCAG 2 cut(s) 123, 200
BspLI GGNNCC 1 cut(s) 184
BspMI ACCTGC 1 cut(s) 172
BspQI GCTCTTC 1 cut(s) 300
BssECI CCNNGG 3 cut(s) 36, 111, 299
BssT1I CCWWGG 1 cut(s) 111
Bst2UI CCWGG 1 cut(s) 300
Bst4CI ACNGT 4 cut(s) 76, 126, 308, 350
Bst6I CTCTTC 1 cut(s) 300
BstAPI GCANNNNNTGC 2 cut(s) 176, 203
BstC8I GCNNGC 1 cut(s) 235
BstDEI CTNAG 3 cut(s) 119, 131, 187
BstDSI CCRYGG 1 cut(s) 36
BstMWI GCNNNNNNNGC 2 cut(s) 176, 203
BstNI CCWGG 1 cut(s) 300
BstNSI RCATGY 2 cut(s) 174, 237
BstSCI CCNGG 1 cut(s) 298
BstSFI CTRYAG 1 cut(s) 72
BstV1I GCAGC 7 cut(s) 28, 41, 111, 154, 190, 217, 266
BsuRI GGCC 2 cut(s) 86, 287
BtgI CCRYGG 1 cut(s) 36
BtgZI GCGATG 1 cut(s) 117
BveI ACCTGC 1 cut(s) 172
Cac8I GCNNGC 1 cut(s) 235
Cfr13I GGNCC 2 cut(s) 115, 286
CviAII CATG 3 cut(s) 21, 171, 234
DdeI CTNAG 3 cut(s) 119, 131, 187
Eam1104I CTCTTC 1 cut(s) 300
EarI CTCTTC 1 cut(s) 300
Eco130I CCWWGG 1 cut(s) 111
Eco47I GGWCC 1 cut(s) 115
EcoO109I RGGNCCY 1 cut(s) 115
EcoRII CCWGG 1 cut(s) 298
EcoT14I CCWWGG 1 cut(s) 111
ErhI CCWWGG 1 cut(s) 111
FaeI CATG 3 cut(s) 24, 174, 237
FaiI YATR 3 cut(s) 22, 172, 235
FatI CATG 3 cut(s) 20, 170, 233
Fnu4HI GCNGC 8 cut(s) 42, 55, 100, 168, 204, 231, 238, 255
Fsp4HI GCNGC 8 cut(s) 42, 55, 100, 168, 204, 231, 238, 255
FspBI CTAG 1 cut(s) 140
GluI GCNGC 8 cut(s) 42, 55, 100, 168, 204, 231, 238, 255
GsuI CTGGAG 1 cut(s) 201
HaeIII GGCC 2 cut(s) 86, 287
Hin1II CATG 3 cut(s) 24, 174, 237
HinfI GANTC 1 cut(s) 312
HphI GGTGA 1 cut(s) 327
Hpy188I TCNGA 1 cut(s) 82
Hpy188III TCNNGA 1 cut(s) 12
HpyAV CCTTC 1 cut(s) 68
HpyCH4III ACNGT 4 cut(s) 76, 126, 308, 350
HpyCH4V TGCA 4 cut(s) 99, 170, 206, 233
HpyF10VI GCNNNNNNNGC 2 cut(s) 176, 203
HpyF3I CTNAG 3 cut(s) 119, 131, 187
Hsp92II CATG 3 cut(s) 24, 174, 237
LguI GCTCTTC 1 cut(s) 300
LmnI GCTCC 1 cut(s) 182
LpnPI CCDG 8 cut(s) 25, 138, 143, 165, 177, 272, 285, 312
Lsp1109I GCAGC 7 cut(s) 28, 41, 111, 154, 190, 217, 266
LweI GCATC 2 cut(s) 206, 215
MaeI CTAG 1 cut(s) 140
MaeIII GTNAC 1 cut(s) 106
MboII GAAGA 1 cut(s) 287
MfeI CAATTG 1 cut(s) 281
MluCI AATT 2 cut(s) 27, 281
MmeI TCCRAC 1 cut(s) 56
MnlI CCTC 4 cut(s) 76, 196, 203, 223
MseI TTAA 1 cut(s) 246
MspR9I CCNGG 1 cut(s) 300
MunI CAATTG 1 cut(s) 281
MvaI CCWGG 1 cut(s) 300
MwoI GCNNNNNNNGC 2 cut(s) 176, 203
NlaIII CATG 3 cut(s) 24, 174, 237
NlaIV GGNNCC 1 cut(s) 184
NspI RCATGY 2 cut(s) 174, 237
PaeI GCATGC 1 cut(s) 237
PaqCI CACCTGC 1 cut(s) 172
PciSI GCTCTTC 1 cut(s) 300
PfeI GAWTC 1 cut(s) 312
PkrI GCNGC 8 cut(s) 43, 56, 101, 169, 205, 232, 239, 256
PpuMI RGGWCCY 1 cut(s) 115
Psp5II RGGWCCY 1 cut(s) 115
Psp6I CCWGG 1 cut(s) 298
PspGI CCWGG 1 cut(s) 298
PspN4I GGNNCC 1 cut(s) 184
PspPI GGNCC 2 cut(s) 115, 286
PspPPI RGGWCCY 1 cut(s) 115
SapI GCTCTTC 1 cut(s) 300
SaqAI TTAA 1 cut(s) 246
SatI GCNGC 8 cut(s) 42, 55, 100, 168, 204, 231, 238, 255
Sau96I GGNCC 2 cut(s) 115, 286
ScrFI CCNGG 1 cut(s) 300
SetI ASST 8 cut(s) 120, 137, 141, 166, 215, 232, 295, 360
SfaNI GCATC 2 cut(s) 206, 215
SfcI CTRYAG 1 cut(s) 72
SinI GGWCC 1 cut(s) 115
SphI GCATGC 1 cut(s) 237
Sse9I AATT 2 cut(s) 27, 281
SsiI CCGC 1 cut(s) 237
SspMI CTAG 1 cut(s) 140
StyD4I CCNGG 1 cut(s) 298
StyI CCWWGG 1 cut(s) 111
TaaI ACNGT 4 cut(s) 76, 126, 308, 350
TasI AATT 2 cut(s) 27, 281
TauI GCSGC 1 cut(s) 240
TfiI GAWTC 1 cut(s) 312
Tru1I TTAA 1 cut(s) 246
Tru9I TTAA 1 cut(s) 246
TseI GCWGC 7 cut(s) 41, 54, 99, 167, 203, 230, 254
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 115
XceI RCATGY 2 cut(s) 174, 237
XspI CTAG 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.