Prupe.2G294000_v2.0.a1

Remorin, C-terminal region

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
28598200 .. 28599121
922 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G294000.1

Sequence Viewer

Length: 378 bp
ATGGCTCAAGAGCTTACAGAGATACGGAAGGAAGTCATTCAGTGTCGTGTAAATACATGGGAGACCAAACAAAAAGCAAAAGTTGATAACAAAGCTGACAAAATGAAAGCCATCAACGAGGAGAAAAGGAACGCAAGTGAAATAGACCTGGAGGCCTTGGGGAAGAAGATTGAGACAAAAGTTGAGAAGCTAAGACATAAGGAACTGGAAAAGATGAAGAACAAAGAAGCTCACTCGATCAAGGTCATAGAAGACACCAAGGTCAAAATTGAAGCAAAACGCACCCATGGACTTCAGAAAGTTGAGAAGAAGGCTGAAAAATTTCGTGGCAGCAATTCTTTGCCAACAAAGTGTTTTGGTGTTTGTGTAGACGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

126

Amino Acids

14.46

Weight (kDa)

9.38

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024472)

Species Orthologous Gene IDs
malus_domestica MD07G1268300.v1.1
prunus_persica Prupe.2G294000_v2.0.a1
pyrus_communis pycom07g24590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 260
AccI GTMKAC 1 cut(s) 369
AcsI RAATTY 1 cut(s) 320
AcuI CTGAAG 1 cut(s) 278
AgsI TTSAA 1 cut(s) 272
AjnI CCWGG 1 cut(s) 147
AluBI AGCT 4 cut(s) 13, 95, 190, 230
AluI AGCT 4 cut(s) 13, 95, 190, 230
Alw26I GTCTC 2 cut(s) 56, 167
AoxI GGCC 1 cut(s) 153
ApeKI GCWGC 1 cut(s) 330
ApoI RAATTY 1 cut(s) 320
Asp700I GAANNNNTTC 2 cut(s) 36, 321
BbsI GAAGAC 1 cut(s) 258
BbvI GCAGC 1 cut(s) 342
BccI CCATC 1 cut(s) 119
BciT130I CCWGG 1 cut(s) 149
BcoDI GTCTC 2 cut(s) 56, 167
BisI GCNGC 1 cut(s) 331
BlsI GCNGC 1 cut(s) 332
Bme1390I CCNGG 1 cut(s) 149
BmrFI CCNGG 1 cut(s) 149
BpiI GAAGAC 1 cut(s) 258
BpmI CTGGAG 1 cut(s) 170
BsaI GGTCTC 1 cut(s) 56
BsaJI CCNNGG 3 cut(s) 156, 258, 286
Bse1I ACTGG 1 cut(s) 210
BseBI CCWGG 1 cut(s) 149
BseDI CCNNGG 3 cut(s) 156, 258, 286
BseNI ACTGG 1 cut(s) 210
BseRI GAGGAG 1 cut(s) 134
BseXI GCAGC 1 cut(s) 342
BshFI GGCC 1 cut(s) 155
BsmAI GTCTC 2 cut(s) 56, 167
BsnI GGCC 1 cut(s) 155
Bso31I GGTCTC 1 cut(s) 56
Bsp143I GATC 1 cut(s) 237
Bsp19I CCATGG 1 cut(s) 286
BspANI GGCC 1 cut(s) 155
BspTNI GGTCTC 1 cut(s) 56
BsrI ACTGG 1 cut(s) 210
BssECI CCNNGG 3 cut(s) 156, 258, 286
BssMI GATC 1 cut(s) 237
BssT1I CCWWGG 3 cut(s) 156, 258, 286
Bst2UI CCWGG 1 cut(s) 149
BstDEI CTNAG 1 cut(s) 191
BstDSI CCRYGG 1 cut(s) 286
BstKTI GATC 1 cut(s) 240
BstMAI GTCTC 2 cut(s) 56, 167
BstMBI GATC 1 cut(s) 237
BstNI CCWGG 1 cut(s) 149
BstSCI CCNGG 1 cut(s) 147
BstV1I GCAGC 1 cut(s) 342
BstV2I GAAGAC 1 cut(s) 258
BsuRI GGCC 1 cut(s) 155
BtgI CCRYGG 1 cut(s) 286
BtsIMutI CAGTG 1 cut(s) 47
CviAII CATG 2 cut(s) 57, 287
CviJI RGCY 8 cut(s) 5, 13, 95, 110, 155, 190, 230, 314
CviKI_1 RGCY 8 cut(s) 5, 13, 95, 110, 155, 190, 230, 314
DdeI CTNAG 1 cut(s) 191
DpnI GATC 1 cut(s) 239
DpnII GATC 1 cut(s) 237
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
Eco130I CCWWGG 3 cut(s) 156, 258, 286
Eco147I AGGCCT 1 cut(s) 155
Eco31I GGTCTC 1 cut(s) 56
Eco57I CTGAAG 1 cut(s) 278
EcoRII CCWGG 1 cut(s) 147
EcoT14I CCWWGG 3 cut(s) 156, 258, 286
ErhI CCWWGG 3 cut(s) 156, 258, 286
FaeI CATG 2 cut(s) 60, 290
FaiI YATR 4 cut(s) 58, 198, 248, 288
FatI CATG 2 cut(s) 56, 286
FblI GTMKAC 1 cut(s) 369
Fnu4HI GCNGC 1 cut(s) 331
Fsp4HI GCNGC 1 cut(s) 331
GluI GCNGC 1 cut(s) 331
GsuI CTGGAG 1 cut(s) 170
HaeIII GGCC 1 cut(s) 155
Hin1II CATG 2 cut(s) 60, 290
Hpy166II GTNNAC 1 cut(s) 370
Hpy188I TCNGA 1 cut(s) 297
Hpy188III TCNNGA 1 cut(s) 8
Hpy8I GTNNAC 1 cut(s) 370
HpyAV CCTTC 2 cut(s) 22, 304
HpyF3I CTNAG 1 cut(s) 191
Hsp92II CATG 2 cut(s) 60, 290
Kzo9I GATC 1 cut(s) 237
LpnPI CCDG 3 cut(s) 134, 161, 191
Lsp1109I GCAGC 1 cut(s) 342
MalI GATC 1 cut(s) 239
MboI GATC 1 cut(s) 237
MboII GAAGA 5 cut(s) 175, 178, 229, 263, 319
MluCI AATT 3 cut(s) 267, 320, 334
MnlI CCTC 2 cut(s) 112, 145
MroXI GAANNNNTTC 2 cut(s) 36, 321
MspR9I CCNGG 1 cut(s) 149
MvaI CCWGG 1 cut(s) 149
NcoI CCATGG 1 cut(s) 286
NdeII GATC 1 cut(s) 237
NlaIII CATG 2 cut(s) 60, 290
PceI AGGCCT 1 cut(s) 155
PdmI GAANNNNTTC 2 cut(s) 36, 321
PkrI GCNGC 1 cut(s) 332
Psp6I CCWGG 1 cut(s) 147
PspGI CCWGG 1 cut(s) 147
SatI GCNGC 1 cut(s) 331
Sau3AI GATC 1 cut(s) 237
ScrFI CCNGG 1 cut(s) 149
SetI ASST 7 cut(s) 15, 97, 150, 192, 232, 246, 264
SmlI CTYRAG 1 cut(s) 6
SmoI CTYRAG 1 cut(s) 6
Sse9I AATT 3 cut(s) 267, 320, 334
SseBI AGGCCT 1 cut(s) 155
StuI AGGCCT 1 cut(s) 155
StyD4I CCNGG 1 cut(s) 147
StyI CCWWGG 3 cut(s) 156, 258, 286
TaqI TCGA 1 cut(s) 236
TasI AATT 3 cut(s) 267, 320, 334
TscAI CASTG 1 cut(s) 47
TseI GCWGC 1 cut(s) 330
TspDTI ATGAA 2 cut(s) 119, 230
TspGWI ACGGA 1 cut(s) 40
TspRI CASTG 1 cut(s) 47
XapI RAATTY 1 cut(s) 320
XmiI GTMKAC 1 cut(s) 369
XmnI GAANNNNTTC 2 cut(s) 36, 321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.