Prupe.2G298600_v2.0.a1

BAHD acyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0013213
Physical Location & Seq
Reverse (-)
28806693 .. 28810044
3352 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G298600.2

Sequence Viewer

Length: 1335 bp
ATGGCAGCTGAGTTGGGAAAAAAGGAGGAAATCTTGAAGGTGAAAGTCACTAACAAAACCCATGTGAAGCCCAACAAGAAGATAGGTAAGAAAGAATGCCAGCTCGTCACATTTGACCTCCCCTACCTGGCTTTTTACTACAACCAGAAGTTACTGTTTTACAAGGGGGCAGAGTATGAGGAAATGGTGAAGAAGCTGAAGGAGGGTTTGGAGGTGGTTCTGGTGGAGTTTTATCAGCTGGCTGGGAAGCTTGGGAAAGATGAGGAAGGAGTGTTTAGGGTTGAGTATGGTGATGAGATGGAGGGTGTGGAGGTTGTGGAGGCTGCATCAGAAGAGATCTGCGTAGCTGATCTGGCTGTTGAGGAAGGCACCAGTGCTTTGAAGGACTTGATACCCTACAATGGGATCTTGAACTTGGAGGGCATTCACAGGCCTTTGCTGGCACTGCAGTTAACCAAGCTGAAGGATGGATTGGCAATAGGGTGCGCCTTCAACCATGCGATCCTAGACGGCACCTCAACGTGGCACTTCATGAGCTCGTGGGCGGAGATCTGCAATGGGTCCAAATCCATTTCAGCCGAACCCTTCCTGGACCGCACCCAAGCCCGAAACACGCGCGTGAAGCTCGATCTCTCTCCGCCTCCATCCAACGGCGACGCGTCGTCCAACGCCAAAGCGGACCCGAACCTAAGAGAGAGAGTGTTCAGGTTTTCGGAAGCAGCCATCGACAAGATCAAGTCAACAATCAACGCAAACGCACCATCGGACGGCTCAAAACCATTCTCCACATTCCAATCCCTCTCCGTCCACATCTGGCGCCACGTCACCAAGGCGCGCCACCTGAAACCCGAAGACTACACGGTCTTCACCGTCTTCGCGGACTGCCGAAAACGGGTCGACCCGCCAATGCCCGATACCTACTTCGGGAACCTAATTCAGGCGGTCTTCACTGTGACAGCAGCCGGGTTGCTGTCGGCGAACTCGCCGGAGTTTGGAGCTTCGATGATCCAGAAGGCGATCGAAGCGCACAACTCGAAAGCCATTGACGAGCGCAACAAGGAGTGGGAGAAGTCGCCGAAGATTTTCGAGTTCAAGGACGCGGGAGTGAACTGCGTGGCGGTGGGGAGCTCGCCGAGGTTTCGGGTTTATGAGGTGGATTTCGGGTGGGGAAAACCGGAGGGGGTGAGAAGCGGGTCGAACAATAGGTTTGATGGGATGGTGTATTTGTACCAGGGGAAGAGCGGTGGGAGAAGCATTGATGTGGAGATTAGCTTGGAGGCTCCGACTATGGAGAAGCTGGAGAAAGACGAGAGCTTTGTTCTGATTGGCAACTAG

Protein Analysis

445

Amino Acids

49.34

Weight (kDa)

5.9

Isoelectric Point (pI)

32.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013213)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23940
fragaria_vesca FvH4_7g30000
malus_domestica MD07G1276500.v1.1
prunus_persica Prupe.2G298600_v2.0.a1 Prupe.2G298600_v2.0.a1
pyrus_communis pycom01g21550 pycom07g25150
rosa_chinensis RchiOBHm_Chr1g0377941
rosa_laevigata RLG00000026484
rosa_multiflora Rmu_sc0002068.1_g000009 Rmu_sc0006294.1_g000001
rosa_roxburghii Rroxscaffold_4G00280910
rosa_rugosa Rorug01G0405400
rosa_samantha Rh1AG425700 Rh1BG383300 Rh1CG397100 Rh1DG414300
rosa_wichuraiana Rw1G037260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 860
AccB1I GGYRCC 3 cut(s) 368, 512, 816
AccBSI CCGCTC 1 cut(s) 1242
AccI GTMKAC 1 cut(s) 897
AccII CGCG 6 cut(s) 616, 618, 659, 835, 878, 1100
AclWI GGATC 3 cut(s) 413, 496, 1000
AcuI CTGAAG 2 cut(s) 218, 482
AcyI GRCGYC 1 cut(s) 817
AfaI GTAC 1 cut(s) 1229
AflIII ACRYGT 1 cut(s) 657
AgsI TTSAA 5 cut(s) 37, 382, 412, 493, 1093
AhdI GACNNNNNGTC 1 cut(s) 661
AjiI CACGTC 1 cut(s) 823
AjnI CCWGG 3 cut(s) 126, 588, 1230
AjuI GAANNNNNNNTTGG 4 cut(s) 191, 223, 455, 487
AleI CACNNNNGTG 1 cut(s) 617
Alw21I GWGCWC 2 cut(s) 539, 1130
AlwI GGATC 3 cut(s) 413, 496, 1000
AoxI GGCC 1 cut(s) 431
ApeKI GCWGC 4 cut(s) 5, 323, 719, 959
ArsI GACNNNNNNTTYG 2 cut(s) 1298, 1330
AscI GGCGCGCC 1 cut(s) 833
Asp700I GAANNNNTTC 1 cut(s) 1082
AspLEI GCGC 7 cut(s) 488, 618, 819, 835, 837, 1027, 1053
AspS9I GGNCC 3 cut(s) 561, 592, 679
AsuC2I CCSGG 1 cut(s) 964
AsuHPI GGTGA 6 cut(s) 52, 199, 302, 817, 859, 1195
AvaII GGWCC 3 cut(s) 561, 592, 679
BanI GGYRCC 3 cut(s) 368, 512, 816
BanII GRGCYC 2 cut(s) 539, 1130
BauI CACGAG 1 cut(s) 538
BbsI GAAGAC 4 cut(s) 856, 858, 865, 937
Bbv12I GWGCWC 2 cut(s) 539, 1130
BbvI GCAGC 4 cut(s) 17, 310, 731, 971
BccI CCATC 7 cut(s) 292, 461, 652, 731, 769, 1205, 1210
BceAI ACGGC 3 cut(s) 526, 667, 784
BciT130I CCWGG 3 cut(s) 128, 590, 1232
BcnI CCSGG 1 cut(s) 964
BfaI CTAG 2 cut(s) 506, 1333
BfmI CTRYAG 1 cut(s) 446
BfoI RGCGCY 1 cut(s) 820
BglII AGATCT 2 cut(s) 336, 549
BisI GCNGC 4 cut(s) 6, 324, 720, 960
BlsI GCNGC 4 cut(s) 7, 325, 721, 961
Bme1390I CCNGG 4 cut(s) 128, 590, 964, 1232
Bme18I GGWCC 3 cut(s) 561, 592, 679
BmeRI GACNNNNNGTC 1 cut(s) 661
BmgBI CACGTC 1 cut(s) 823
BmgT120I GGNCC 3 cut(s) 561, 592, 679
BmiI GGNNCC 7 cut(s) 370, 514, 562, 681, 818, 929, 1281
BmrFI CCNGG 4 cut(s) 128, 590, 964, 1232
BmsI GCATC 1 cut(s) 335
BpiI GAAGAC 4 cut(s) 856, 858, 865, 937
BpmI CTGGAG 1 cut(s) 1319
BpuMI CCSGG 1 cut(s) 964
BsaHI GRCGYC 1 cut(s) 817
BsaJI CCNNGG 3 cut(s) 828, 1133, 1231
BsaWI WCCGGW 1 cut(s) 1174
Bse1I ACTGG 1 cut(s) 372
Bse3DI GCAATG 1 cut(s) 562
BseBI CCWGG 3 cut(s) 128, 590, 1232
BseDI CCNNGG 3 cut(s) 828, 1133, 1231
BseGI GGATG 3 cut(s) 472, 644, 1221
BseMI GCAATG 1 cut(s) 562
BseNI ACTGG 1 cut(s) 372
BsePI GCGCGC 1 cut(s) 833
BseXI GCAGC 4 cut(s) 17, 310, 731, 971
BseYI CCCAGC 1 cut(s) 242
Bsh1236I CGCG 6 cut(s) 616, 618, 659, 835, 878, 1100
Bsh1285I CGRYCG 1 cut(s) 1020
BshFI GGCC 1 cut(s) 433
BshNI GGYRCC 3 cut(s) 368, 512, 816
BsiEI CGRYCG 1 cut(s) 1020
BsiHKAI GWGCWC 2 cut(s) 539, 1130
BsiSI CCGG 3 cut(s) 963, 986, 1175
BsmI GAATGC 2 cut(s) 101, 423
BsnI GGCC 1 cut(s) 433
Bsp1286I GDGCHC 2 cut(s) 539, 1130
Bsp143I GATC 9 cut(s) 336, 349, 405, 501, 549, 628, 732, 1005, 1017
BspANI GGCC 1 cut(s) 433
BspFNI CGCG 6 cut(s) 616, 618, 659, 835, 878, 1100
BspHI TCATGA 1 cut(s) 531
BspLI GGNNCC 7 cut(s) 370, 514, 562, 681, 818, 929, 1281
BspMAI CTGCAG 1 cut(s) 450
BspPI GGATC 3 cut(s) 413, 496, 1000
BspQI GCTCTTC 1 cut(s) 1232
BspT107I GGYRCC 3 cut(s) 368, 512, 816
BsrBI CCGCTC 1 cut(s) 1242
BsrDI GCAATG 1 cut(s) 562
BsrI ACTGG 1 cut(s) 372
BssECI CCNNGG 3 cut(s) 828, 1133, 1231
BssHII GCGCGC 1 cut(s) 833
BssMI GATC 9 cut(s) 336, 349, 405, 501, 549, 628, 732, 1005, 1017
BssNI GRCGYC 1 cut(s) 817
BssSI CACGAG 1 cut(s) 538
BssT1I CCWWGG 1 cut(s) 828
Bst2BI CACGAG 1 cut(s) 538
Bst2UI CCWGG 3 cut(s) 128, 590, 1232
Bst4CI ACNGT 4 cut(s) 156, 862, 871, 952
Bst6I CTCTTC 2 cut(s) 327, 1232
BstACI GRCGYC 1 cut(s) 817
BstC8I GCNNGC 5 cut(s) 101, 240, 441, 835, 1130
BstDEI CTNAG 2 cut(s) 9, 689
BstENI CCTNNNNNAGG 1 cut(s) 935
BstF5I GGATG 3 cut(s) 472, 644, 1221
BstFNI CGCG 6 cut(s) 616, 618, 659, 835, 878, 1100
BstH2I RGCGCY 1 cut(s) 820
BstHHI GCGC 7 cut(s) 488, 618, 819, 835, 837, 1027, 1053
BstKTI GATC 9 cut(s) 339, 352, 408, 504, 552, 631, 735, 1008, 1020
BstMBI GATC 9 cut(s) 336, 349, 405, 501, 549, 628, 732, 1005, 1017
BstMCI CGRYCG 1 cut(s) 1020
BstMWI GCNNNNNNNGC 4 cut(s) 353, 445, 622, 1022
BstNI CCWGG 3 cut(s) 128, 590, 1232
BstSCI CCNGG 4 cut(s) 126, 588, 962, 1230
BstSFI CTRYAG 1 cut(s) 446
BstUI CGCG 6 cut(s) 616, 618, 659, 835, 878, 1100
BstV1I GCAGC 4 cut(s) 17, 310, 731, 971
BstV2I GAAGAC 4 cut(s) 856, 858, 865, 937
BstX2I RGATCY 3 cut(s) 336, 405, 549
BstYI RGATCY 3 cut(s) 336, 405, 549
BsuRI GGCC 1 cut(s) 433
BtrI CACGTC 1 cut(s) 823
BtsCI GGATG 3 cut(s) 472, 644, 1221
BtsI GCAGTG 1 cut(s) 443
BtsIMutI CAGTG 3 cut(s) 379, 443, 948
Cac8I GCNNGC 5 cut(s) 101, 240, 441, 835, 1130
CciI TCATGA 1 cut(s) 531
CfoI GCGC 7 cut(s) 488, 618, 819, 835, 837, 1027, 1053
Cfr13I GGNCC 3 cut(s) 561, 592, 679
CseI GACGC 3 cut(s) 648, 665, 1106
Csp6I GTAC 1 cut(s) 1228
CviAII CATG 3 cut(s) 62, 497, 532
CviQI GTAC 1 cut(s) 1228
DdeI CTNAG 2 cut(s) 9, 689
DinI GGCGCC 1 cut(s) 818
DpnI GATC 9 cut(s) 338, 351, 407, 503, 551, 630, 734, 1007, 1019
DpnII GATC 9 cut(s) 336, 349, 405, 501, 549, 628, 732, 1005, 1017
DrdI GACNNNNNNGTC 1 cut(s) 860
DriI GACNNNNNGTC 1 cut(s) 661
DseDI GACNNNNNNGTC 1 cut(s) 860
Eam1104I CTCTTC 2 cut(s) 327, 1232
Eam1105I GACNNNNNGTC 1 cut(s) 661
EarI CTCTTC 2 cut(s) 327, 1232
EciI GGCGGA 2 cut(s) 560, 627
Ecl136II GAGCTC 2 cut(s) 537, 1128
Eco130I CCWWGG 1 cut(s) 828
Eco147I AGGCCT 1 cut(s) 433
Eco24I GRGCYC 2 cut(s) 539, 1130
Eco47I GGWCC 3 cut(s) 561, 592, 679
Eco53kI GAGCTC 2 cut(s) 537, 1128
Eco57I CTGAAG 2 cut(s) 218, 482
EcoICRI GAGCTC 2 cut(s) 537, 1128
EcoNI CCTNNNNNAGG 1 cut(s) 935
EcoRII CCWGG 3 cut(s) 126, 588, 1230
EcoT14I CCWWGG 1 cut(s) 828
EcoT38I GRGCYC 2 cut(s) 539, 1130
EgeI GGCGCC 1 cut(s) 818
EheI GGCGCC 1 cut(s) 818
ErhI CCWWGG 1 cut(s) 828
FaeI CATG 3 cut(s) 65, 500, 535
FaiI YATR 7 cut(s) 63, 177, 288, 498, 533, 1149, 1289
FatI CATG 3 cut(s) 61, 496, 531
FauI CCCGC 3 cut(s) 909, 1093, 1184
FblI GTMKAC 1 cut(s) 897
Fnu4HI GCNGC 4 cut(s) 6, 324, 720, 960
FokI GGATG 3 cut(s) 479, 631, 1228
FriOI GRGCYC 2 cut(s) 539, 1130
Fsp4HI GCNGC 4 cut(s) 6, 324, 720, 960
FspBI CTAG 2 cut(s) 506, 1333
GlaI GCGC 7 cut(s) 487, 617, 818, 834, 836, 1026, 1052
GluI GCNGC 4 cut(s) 6, 324, 720, 960
GsaI CCCAGC 1 cut(s) 246
GsuI CTGGAG 1 cut(s) 1319
HaeII RGCGCY 1 cut(s) 820
HaeIII GGCC 1 cut(s) 433
HapII CCGG 3 cut(s) 963, 986, 1175
HgaI GACGC 3 cut(s) 648, 665, 1106
HhaI GCGC 7 cut(s) 488, 618, 819, 835, 837, 1027, 1053
Hin1I GRCGYC 1 cut(s) 817
Hin1II CATG 3 cut(s) 65, 500, 535
Hin6I GCGC 7 cut(s) 486, 616, 817, 833, 835, 1025, 1051
HinP1I GCGC 7 cut(s) 486, 616, 817, 833, 835, 1025, 1051
HincII GTYRAC 3 cut(s) 453, 741, 898
HindII GTYRAC 3 cut(s) 453, 741, 898
HindIII AAGCTT 1 cut(s) 248
HpaI GTTAAC 1 cut(s) 453
HpaII CCGG 3 cut(s) 963, 986, 1175
HphI GGTGA 6 cut(s) 52, 199, 302, 817, 859, 1195
Hpy166II GTNNAC 5 cut(s) 453, 741, 808, 898, 1108
Hpy188I TCNGA 5 cut(s) 331, 715, 766, 1284, 1323
Hpy188III TCNNGA 5 cut(s) 34, 409, 532, 925, 1009
Hpy8I GTNNAC 5 cut(s) 453, 741, 808, 898, 1108
Hpy99I CGWCG 2 cut(s) 659, 664
HpyAV CCTTC 9 cut(s) 31, 193, 260, 359, 376, 457, 499, 595, 1006
HpyCH4III ACNGT 4 cut(s) 156, 862, 871, 952
HpyCH4IV ACGT 2 cut(s) 521, 822
HpyCH4V TGCA 3 cut(s) 326, 448, 555
HpyF10VI GCNNNNNNNGC 4 cut(s) 353, 445, 622, 1022
HpyF3I CTNAG 2 cut(s) 9, 689
HpySE526I ACGT 2 cut(s) 521, 822
Hsp92I GRCGYC 1 cut(s) 817
Hsp92II CATG 3 cut(s) 65, 500, 535
HspAI GCGC 7 cut(s) 486, 616, 817, 833, 835, 1025, 1051
KasI GGCGCC 1 cut(s) 816
KspAI GTTAAC 1 cut(s) 453
Kzo9I GATC 9 cut(s) 336, 349, 405, 501, 549, 628, 732, 1005, 1017
LguI GCTCTTC 1 cut(s) 1232
LmnI GCTCC 3 cut(s) 995, 1125, 1285
Lsp1109I GCAGC 4 cut(s) 17, 310, 731, 971
LweI GCATC 1 cut(s) 335
MaeI CTAG 2 cut(s) 506, 1333
MaeII ACGT 2 cut(s) 521, 822
MaeIII GTNAC 5 cut(s) 46, 106, 150, 823, 952
MalI GATC 9 cut(s) 338, 351, 407, 503, 551, 630, 734, 1007, 1019
MbiI CCGCTC 1 cut(s) 1242
MboI GATC 9 cut(s) 336, 349, 405, 501, 549, 628, 732, 1005, 1017
MboII GAAGA 9 cut(s) 91, 202, 344, 856, 863, 865, 937, 1090, 1249
MflI RGATCY 3 cut(s) 336, 405, 549
MhlI GDGCHC 2 cut(s) 539, 1130
MluCI AATT 1 cut(s) 933
MluI ACGCGT 1 cut(s) 657
Mly113I GGCGCC 1 cut(s) 817
MmeI TCCRAC 3 cut(s) 672, 690, 1307
MroXI GAANNNNTTC 1 cut(s) 1082
MseI TTAA 1 cut(s) 452
MslI CAYNNNNRTG 2 cut(s) 617, 1259
MspA1I CMGCKG 2 cut(s) 8, 238
MspI CCGG 3 cut(s) 963, 986, 1175
MspR9I CCNGG 4 cut(s) 128, 590, 964, 1232
Mva1269I GAATGC 2 cut(s) 101, 423
MvaI CCWGG 3 cut(s) 128, 590, 1232
MvnI CGCG 6 cut(s) 616, 618, 659, 835, 878, 1100
MwoI GCNNNNNNNGC 4 cut(s) 353, 445, 622, 1022
NarI GGCGCC 1 cut(s) 817
NciI CCSGG 1 cut(s) 964
NdeII GATC 9 cut(s) 336, 349, 405, 501, 549, 628, 732, 1005, 1017
NlaIII CATG 3 cut(s) 65, 500, 535
NlaIV GGNNCC 7 cut(s) 370, 514, 562, 681, 818, 929, 1281
NmeAIII GCCGAG 1 cut(s) 1158
NmuCI GTSAC 4 cut(s) 46, 106, 823, 952
OliI CACNNNNGTG 1 cut(s) 617
PagI TCATGA 1 cut(s) 531
PalAI GGCGCGCC 1 cut(s) 833
PauI GCGCGC 1 cut(s) 833
PceI AGGCCT 1 cut(s) 433
PciSI GCTCTTC 1 cut(s) 1232
PctI GAATGC 2 cut(s) 101, 423
PdmI GAANNNNTTC 1 cut(s) 1082
PfoI TCCNGGA 1 cut(s) 588
PkrI GCNGC 4 cut(s) 7, 325, 721, 961
Ple19I CGATCG 1 cut(s) 1020
PluTI GGCGCC 1 cut(s) 820
Psp124BI GAGCTC 2 cut(s) 539, 1130
Psp6I CCWGG 3 cut(s) 126, 588, 1230
PspFI CCCAGC 1 cut(s) 242
PspGI CCWGG 3 cut(s) 126, 588, 1230
PspN4I GGNNCC 7 cut(s) 370, 514, 562, 681, 818, 929, 1281
PspPI GGNCC 3 cut(s) 561, 592, 679
PstI CTGCAG 1 cut(s) 450
PsuI RGATCY 3 cut(s) 336, 405, 549
PteI GCGCGC 1 cut(s) 833
PvuI CGATCG 1 cut(s) 1020
PvuII CAGCTG 2 cut(s) 8, 238
RsaI GTAC 1 cut(s) 1229
RsaNI GTAC 1 cut(s) 1228
RseI CAYNNNNRTG 2 cut(s) 617, 1259
SacI GAGCTC 2 cut(s) 539, 1130
SalI GTCGAC 1 cut(s) 896
SapI GCTCTTC 1 cut(s) 1232
SaqAI TTAA 1 cut(s) 452
SatI GCNGC 4 cut(s) 6, 324, 720, 960
Sau3AI GATC 9 cut(s) 336, 349, 405, 501, 549, 628, 732, 1005, 1017
Sau96I GGNCC 3 cut(s) 561, 592, 679
ScrFI CCNGG 4 cut(s) 128, 590, 964, 1232
SduI GDGCHC 2 cut(s) 539, 1130
SfaNI GCATC 1 cut(s) 335
SfcI CTRYAG 1 cut(s) 446
SfoI GGCGCC 1 cut(s) 818
SgsI GGCGCGCC 1 cut(s) 833
SinI GGWCC 3 cut(s) 561, 592, 679
SmiMI CAYNNNNRTG 2 cut(s) 617, 1259
Sse9I AATT 1 cut(s) 933
SseBI AGGCCT 1 cut(s) 433
SspDI GGCGCC 1 cut(s) 816
SspMI CTAG 2 cut(s) 506, 1333
SstI GAGCTC 2 cut(s) 539, 1130
StuI AGGCCT 1 cut(s) 433
StyD4I CCNGG 4 cut(s) 126, 588, 962, 1230
StyI CCWWGG 1 cut(s) 828
TaaI ACNGT 4 cut(s) 156, 862, 871, 952
TaiI ACGT 2 cut(s) 524, 825
TaqI TCGA 8 cut(s) 627, 726, 897, 1001, 1020, 1034, 1086, 1196
TasI AATT 1 cut(s) 933
Tru1I TTAA 1 cut(s) 452
Tru9I TTAA 1 cut(s) 452
TscAI CASTG 3 cut(s) 379, 450, 955
TseFI GTSAC 4 cut(s) 46, 106, 823, 952
TseI GCWGC 4 cut(s) 5, 323, 719, 959
Tsp45I GTSAC 4 cut(s) 46, 106, 823, 952
TspDTI ATGAA 1 cut(s) 520
TspGWI ACGGA 1 cut(s) 793
TspRI CASTG 3 cut(s) 379, 450, 955
VpaK11BI GGWCC 3 cut(s) 561, 592, 679
XagI CCTNNNNNAGG 1 cut(s) 935
XmiI GTMKAC 1 cut(s) 897
XmnI GAANNNNTTC 1 cut(s) 1082
XspI CTAG 2 cut(s) 506, 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.