pycom07g25150

BAHD acyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0013213
Physical Location & Seq
Reverse (-)
25582544 .. 25585589
3046 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g25150.2

Sequence Viewer

Length: 1131 bp
ATGGCGGACATATCGAAGGTGAAAGTCACCGGAAAAACCCATGTGAAGCCTAACAAGAAGATAGGCAGCCAACAATGTCAACTAGTCACATTTGACCTACCCTACCTGGCTTTTTACTACAACCAAAAGCTCCTTTTTTACAAGGGGGGTGAGTTCGAGGAAATGGTGAAGAAACTGAAGGAGGGTTTGGAGGTGGTTCTGGGGGAGTTTTACCAGCTGGCGGGGAAGCTTGGGAAGGACGAGGAGGGAGTGTTTAGGGTTGAGTATGGGGATGAGATGGAGGGCGTGGAGGTGGCCGAGGCGGCGGCGGAGGAGATCAGTATAGCTGATCTGGCAGTTGAGGAAGGCACCAGTGCTTTGAAGGACTTCATACCCTACAATGGGGTCTTGAACTTGGAGGGCGTTCACAGGCCACTCCTAGCAGTGCAGTTGACCAAGCTGAAAGATGGACTGGCGATAGGGTGCGCCTTCAACCATGCAATCCTAGACGGGACCTCCACGTGGTACTTCATGAGCTCATGGGCCGAGATCTGCAACGGATCCAAATCCATCTCGACCCAACCATTTCTGGACCGGACCCAGGCCCGAAACACGCGCGTGAAGCTCGATCTCTCCCCGCCACCATCAAACGGCGACGTTTTGGCCAACGATAAAAAGGACCCGAACCTGAGAGAGAGAGTCTTCAAATTCTCTGAAGCAGCAATCGACAAGATCAAGTCAATGGTCAACGCAAACCGTCCATCCGACGGCTCAAAACCGTTCTCAACATTCCAGTCCCTCTCCGTCCACATCTGGCGCCACGTCACCCAAGCCCGCCAACTAAAACCCGAGGACTACACGGTGTTCACCGTTTTCGCTGACTGCCGCAAACGGGTCGACCCGCCCATGCCCGACGCCTACTTCGGGAACCTAATCCAGGCCGTGTTCACCGTCACGGCCGCCGGATTGCTGTCGGCGAACCCGCCGCAGTTCGGCGCATCGATCGATCCAGAAGGCGATCGAGGGGCACAACGCGAAAGCGATCGATCAGAGGAACACGGAGTGGGAGAGCTCGCCGAAGATTTTCGAGTTCAAAGATGCGGGAGTAAACTGCGTGGCGATGGGGAGCTCGCCAAGGTTCCAGGTGTATGA

Protein Analysis

377

Amino Acids

41.52

Weight (kDa)

5.57

Isoelectric Point (pI)

26.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013213)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23940
fragaria_vesca FvH4_7g30000
malus_domestica MD07G1276500.v1.1
prunus_persica Prupe.2G298600_v2.0.a1 Prupe.2G298600_v2.0.a1
pyrus_communis pycom01g21550 pycom07g25150
rosa_chinensis RchiOBHm_Chr1g0377941
rosa_laevigata RLG00000026484
rosa_multiflora Rmu_sc0002068.1_g000009 Rmu_sc0006294.1_g000001
rosa_roxburghii Rroxscaffold_4G00280910
rosa_rugosa Rorug01G0405400
rosa_samantha Rh1AG425700 Rh1BG383300 Rh1CG397100 Rh1DG414300
rosa_wichuraiana Rw1G037260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 347, 795
AccI GTMKAC 1 cut(s) 876
AccII CGCG 3 cut(s) 595, 597, 1014
AclWI GGATC 3 cut(s) 534, 547, 980
AcoI YGGCCR 3 cut(s) 294, 642, 936
AcsI RAATTY 1 cut(s) 686
AcuI CTGAAG 2 cut(s) 197, 714
AcvI CACGTG 1 cut(s) 501
AcyI GRCGYC 2 cut(s) 796, 894
AdeI CACNNNGTG 1 cut(s) 1042
AfaI GTAC 1 cut(s) 506
AgsI TTSAA 5 cut(s) 361, 391, 472, 685, 1073
AhlI ACTAGT 1 cut(s) 82
AjiI CACGTC 1 cut(s) 802
AjnI CCWGG 4 cut(s) 105, 579, 915, 1120
AjuI GAANNNNNNNTTGG 2 cut(s) 170, 202
AleI CACNNNNGTG 1 cut(s) 596
AluBI AGCT 9 cut(s) 130, 217, 229, 326, 439, 516, 604, 1051, 1108
AluI AGCT 9 cut(s) 130, 217, 229, 326, 439, 516, 604, 1051, 1108
Alw21I GWGCWC 3 cut(s) 518, 1053, 1110
AlwI GGATC 3 cut(s) 534, 547, 980
Ama87I CYCGRG 1 cut(s) 827
AoxI GGCC 7 cut(s) 294, 410, 522, 582, 642, 918, 936
ApeKI GCWGC 2 cut(s) 66, 698
ApoI RAATTY 1 cut(s) 686
ArsI GACNNNNNNTTYG 2 cut(s) 884, 916
Asp700I GAANNNNTTC 2 cut(s) 365, 1062
AspLEI GCGC 4 cut(s) 467, 597, 798, 977
AspS9I GGNCC 6 cut(s) 492, 522, 571, 576, 583, 658
AsuHPI GGTGA 7 cut(s) 19, 31, 161, 178, 796, 838, 919
AvaI CYCGRG 1 cut(s) 827
AvaII GGWCC 4 cut(s) 492, 571, 576, 658
BaeGI GKGCMC 1 cut(s) 1009
BalI TGGCCA 1 cut(s) 644
BamHI GGATCC 1 cut(s) 539
BanI GGYRCC 2 cut(s) 347, 795
BanII GRGCYC 3 cut(s) 518, 1053, 1110
BbrPI CACGTG 1 cut(s) 501
BbsI GAAGAC 1 cut(s) 673
Bbv12I GWGCWC 3 cut(s) 518, 1053, 1110
BbvI GCAGC 2 cut(s) 78, 710
BccI CCATC 6 cut(s) 271, 440, 557, 631, 748, 1094
BceAI ACGGC 4 cut(s) 646, 763, 905, 951
BcgI CGANNNNNNTGC 2 cut(s) 856, 890
BciT130I CCWGG 4 cut(s) 107, 581, 917, 1122
BcuI ACTAGT 1 cut(s) 82
BfaI CTAG 3 cut(s) 83, 419, 485
BfoI RGCGCY 1 cut(s) 799
BglI GCCNNNNNGGC 1 cut(s) 302
BglII AGATCT 1 cut(s) 528
BisI GCNGC 7 cut(s) 67, 303, 306, 699, 865, 939, 965
BlsI GCNGC 7 cut(s) 68, 304, 307, 700, 866, 940, 966
Bme1390I CCNGG 4 cut(s) 107, 581, 917, 1122
Bme18I GGWCC 4 cut(s) 492, 571, 576, 658
BmeT110I CYCGRG 1 cut(s) 827
BmgBI CACGTC 1 cut(s) 802
BmgT120I GGNCC 6 cut(s) 492, 522, 571, 576, 583, 658
BmiI GGNNCC 8 cut(s) 349, 493, 541, 578, 660, 797, 908, 1119
BmrFI CCNGG 4 cut(s) 107, 581, 917, 1122
BmsI GCATC 2 cut(s) 986, 1067
BpiI GAAGAC 1 cut(s) 673
Bsa29I ATCGAT 3 cut(s) 980, 984, 1024
BsaAI YACGTR 1 cut(s) 501
BsaBI GATNNNNATC 1 cut(s) 544
BsaHI GRCGYC 2 cut(s) 796, 894
BsaJI CCNNGG 4 cut(s) 297, 579, 828, 1113
BsaWI WCCGGW 2 cut(s) 29, 573
BsaXI ACNNNNNCTCC 4 cut(s) 236, 266, 479, 509
Bse1I ACTGG 3 cut(s) 351, 456, 772
Bse8I GATNNNNATC 1 cut(s) 544
BseBI CCWGG 4 cut(s) 107, 581, 917, 1122
BseCI ATCGAT 3 cut(s) 980, 984, 1024
BseDI CCNNGG 4 cut(s) 297, 579, 828, 1113
BseGI GGATG 2 cut(s) 277, 740
BseJI GATNNNNATC 1 cut(s) 544
BseMII CTCAG 1 cut(s) 659
BseNI ACTGG 3 cut(s) 351, 456, 772
BseRI GAGGAG 2 cut(s) 257, 326
BseSI GKGCMC 1 cut(s) 1009
BseX3I CGGCCG 1 cut(s) 936
BseXI GCAGC 2 cut(s) 78, 710
BsgI GTGCAG 1 cut(s) 446
Bsh1236I CGCG 3 cut(s) 595, 597, 1014
Bsh1285I CGRYCG 4 cut(s) 939, 984, 1000, 1024
BshFI GGCC 7 cut(s) 296, 412, 524, 584, 644, 920, 938
BshNI GGYRCC 2 cut(s) 347, 795
BshVI ATCGAT 3 cut(s) 980, 984, 1024
BsiEI CGRYCG 4 cut(s) 939, 984, 1000, 1024
BsiHKAI GWGCWC 3 cut(s) 518, 1053, 1110
BsiHKCI CYCGRG 1 cut(s) 827
BsiSI CCGG 3 cut(s) 30, 574, 942
BslFI GGGAC 2 cut(s) 505, 760
BsmFI GGGAC 2 cut(s) 505, 760
BsnI GGCC 7 cut(s) 296, 412, 524, 584, 644, 920, 938
BsoBI CYCGRG 1 cut(s) 827
Bsp1286I GDGCHC 4 cut(s) 518, 1009, 1053, 1110
BspANI GGCC 7 cut(s) 296, 412, 524, 584, 644, 920, 938
BspCNI CTCAG 1 cut(s) 660
BspDI ATCGAT 3 cut(s) 980, 984, 1024
BspFNI CGCG 3 cut(s) 595, 597, 1014
BspHI TCATGA 1 cut(s) 510
BspLI GGNNCC 8 cut(s) 349, 493, 541, 578, 660, 797, 908, 1119
BspPI GGATC 3 cut(s) 534, 547, 980
BspT107I GGYRCC 2 cut(s) 347, 795
BsrI ACTGG 3 cut(s) 351, 456, 772
BssECI CCNNGG 4 cut(s) 297, 579, 828, 1113
BssNI GRCGYC 2 cut(s) 796, 894
BssT1I CCWWGG 1 cut(s) 1113
Bst2UI CCWGG 4 cut(s) 107, 581, 917, 1122
Bst4CI ACNGT 5 cut(s) 737, 759, 841, 850, 931
BstACI GRCGYC 2 cut(s) 796, 894
BstBAI YACGTR 1 cut(s) 501
BstC8I GCNNGC 4 cut(s) 219, 814, 1053, 1110
BstDEI CTNAG 1 cut(s) 668
BstENI CCTNNNNNAGG 1 cut(s) 914
BstF5I GGATG 2 cut(s) 277, 740
BstFNI CGCG 3 cut(s) 595, 597, 1014
BstH2I RGCGCY 1 cut(s) 799
BstHHI GCGC 4 cut(s) 467, 597, 798, 977
BstMCI CGRYCG 4 cut(s) 939, 984, 1000, 1024
BstMWI GCNNNNNNNGC 3 cut(s) 302, 332, 601
BstNI CCWGG 4 cut(s) 107, 581, 917, 1122
BstSCI CCNGG 4 cut(s) 105, 579, 915, 1120
BstSLI GKGCMC 1 cut(s) 1009
BstUI CGCG 3 cut(s) 595, 597, 1014
BstV1I GCAGC 2 cut(s) 78, 710
BstV2I GAAGAC 1 cut(s) 673
BstX2I RGATCY 2 cut(s) 528, 539
BstYI RGATCY 2 cut(s) 528, 539
BstZI CGGCCG 1 cut(s) 936
Bsu15I ATCGAT 3 cut(s) 980, 984, 1024
BsuRI GGCC 7 cut(s) 296, 412, 524, 584, 644, 920, 938
BsuTUI ATCGAT 3 cut(s) 980, 984, 1024
BtgZI GCGATG 1 cut(s) 1113
BtrI CACGTC 1 cut(s) 802
BtsCI GGATG 2 cut(s) 277, 740
BtsI GCAGTG 1 cut(s) 429
BtsIMutI CAGTG 2 cut(s) 358, 429
Cac8I GCNNGC 4 cut(s) 219, 814, 1053, 1110
CciI TCATGA 1 cut(s) 510
CfoI GCGC 4 cut(s) 467, 597, 798, 977
Cfr13I GGNCC 6 cut(s) 492, 522, 571, 576, 583, 658
ClaI ATCGAT 3 cut(s) 980, 984, 1024
CseI GACGC 1 cut(s) 902
Csp6I GTAC 1 cut(s) 505
CviAII CATG 5 cut(s) 41, 476, 511, 519, 886
CviQI GTAC 1 cut(s) 505
DdeI CTNAG 1 cut(s) 668
DinI GGCGCC 1 cut(s) 797
DraIII CACNNNGTG 1 cut(s) 1042
EaeI YGGCCR 3 cut(s) 294, 642, 936
EagI CGGCCG 1 cut(s) 936
EciI GGCGGA 2 cut(s) 20, 323
Ecl136II GAGCTC 3 cut(s) 516, 1051, 1108
EclXI CGGCCG 1 cut(s) 936
Eco130I CCWWGG 1 cut(s) 1113
Eco24I GRGCYC 3 cut(s) 518, 1053, 1110
Eco47I GGWCC 4 cut(s) 492, 571, 576, 658
Eco52I CGGCCG 1 cut(s) 936
Eco53kI GAGCTC 3 cut(s) 516, 1051, 1108
Eco57I CTGAAG 2 cut(s) 197, 714
Eco72I CACGTG 1 cut(s) 501
Eco88I CYCGRG 1 cut(s) 827
EcoICRI GAGCTC 3 cut(s) 516, 1051, 1108
EcoNI CCTNNNNNAGG 1 cut(s) 914
EcoO109I RGGNCCY 2 cut(s) 492, 658
EcoRII CCWGG 4 cut(s) 105, 579, 915, 1120
EcoT14I CCWWGG 1 cut(s) 1113
EcoT38I GRGCYC 3 cut(s) 518, 1053, 1110
EgeI GGCGCC 1 cut(s) 797
EheI GGCGCC 1 cut(s) 797
ErhI CCWWGG 1 cut(s) 1113
FaeI CATG 5 cut(s) 44, 479, 514, 522, 889
FaqI GGGAC 2 cut(s) 505, 760
FatI CATG 5 cut(s) 40, 475, 510, 518, 885
FauI CCCGC 6 cut(s) 214, 624, 821, 888, 969, 1073
FblI GTMKAC 1 cut(s) 876
Fnu4HI GCNGC 7 cut(s) 67, 303, 306, 699, 865, 939, 965
FokI GGATG 2 cut(s) 284, 727
FriOI GRGCYC 3 cut(s) 518, 1053, 1110
Fsp4HI GCNGC 7 cut(s) 67, 303, 306, 699, 865, 939, 965
FspBI CTAG 3 cut(s) 83, 419, 485
GlaI GCGC 4 cut(s) 466, 596, 797, 976
GluI GCNGC 7 cut(s) 67, 303, 306, 699, 865, 939, 965
HaeII RGCGCY 1 cut(s) 799
HaeIII GGCC 7 cut(s) 296, 412, 524, 584, 644, 920, 938
HapII CCGG 3 cut(s) 30, 574, 942
HgaI GACGC 1 cut(s) 902
HhaI GCGC 4 cut(s) 467, 597, 798, 977
Hin1I GRCGYC 2 cut(s) 796, 894
Hin1II CATG 5 cut(s) 44, 479, 514, 522, 889
Hin6I GCGC 4 cut(s) 465, 595, 796, 975
HinP1I GCGC 4 cut(s) 465, 595, 796, 975
HincII GTYRAC 4 cut(s) 80, 432, 727, 877
HindII GTYRAC 4 cut(s) 80, 432, 727, 877
HindIII AAGCTT 1 cut(s) 227
HinfI GANTC 1 cut(s) 678
HpaII CCGG 3 cut(s) 30, 574, 942
HphI GGTGA 7 cut(s) 19, 31, 161, 178, 796, 838, 919
Hpy166II GTNNAC 9 cut(s) 80, 406, 432, 727, 787, 846, 877, 927, 1088
Hpy188I TCNGA 3 cut(s) 694, 745, 1030
Hpy188III TCNNGA 6 cut(s) 388, 511, 553, 569, 904, 989
Hpy8I GTNNAC 9 cut(s) 80, 406, 432, 727, 787, 846, 877, 927, 1088
Hpy99I CGWCG 3 cut(s) 638, 749, 896
HpyAV CCTTC 7 cut(s) 10, 172, 229, 338, 355, 478, 986
HpyCH4III ACNGT 5 cut(s) 737, 759, 841, 850, 931
HpyCH4IV ACGT 3 cut(s) 500, 636, 801
HpyCH4V TGCA 3 cut(s) 427, 479, 534
HpyF10VI GCNNNNNNNGC 3 cut(s) 302, 332, 601
HpyF3I CTNAG 1 cut(s) 668
HpySE526I ACGT 3 cut(s) 500, 636, 801
Hsp92I GRCGYC 2 cut(s) 796, 894
Hsp92II CATG 5 cut(s) 44, 479, 514, 522, 889
HspAI GCGC 4 cut(s) 465, 595, 796, 975
KasI GGCGCC 1 cut(s) 795
LmnI GCTCC 2 cut(s) 135, 1105
Lsp1109I GCAGC 2 cut(s) 78, 710
LweI GCATC 2 cut(s) 986, 1067
MaeI CTAG 3 cut(s) 83, 419, 485
MaeII ACGT 3 cut(s) 500, 636, 801
MaeIII GTNAC 4 cut(s) 25, 85, 802, 931
MboII GAAGA 4 cut(s) 70, 181, 673, 1070
MflI RGATCY 2 cut(s) 528, 539
MhlI GDGCHC 4 cut(s) 518, 1009, 1053, 1110
MlsI TGGCCA 1 cut(s) 644
MluCI AATT 1 cut(s) 686
MluNI TGGCCA 1 cut(s) 644
Mly113I GGCGCC 1 cut(s) 796
MlyI GAGTC 1 cut(s) 687
MmeI TCCRAC 1 cut(s) 768
Mox20I TGGCCA 1 cut(s) 644
MroXI GAANNNNTTC 2 cut(s) 365, 1062
MscI TGGCCA 1 cut(s) 644
MslI CAYNNNNRTG 1 cut(s) 596
Msp20I TGGCCA 1 cut(s) 644
MspA1I CMGCKG 1 cut(s) 217
MspI CCGG 3 cut(s) 30, 574, 942
MspR9I CCNGG 4 cut(s) 107, 581, 917, 1122
MvaI CCWGG 4 cut(s) 107, 581, 917, 1122
MvnI CGCG 3 cut(s) 595, 597, 1014
MwoI GCNNNNNNNGC 3 cut(s) 302, 332, 601
NarI GGCGCC 1 cut(s) 796
NlaIII CATG 5 cut(s) 44, 479, 514, 522, 889
NlaIV GGNNCC 8 cut(s) 349, 493, 541, 578, 660, 797, 908, 1119
NmeAIII GCCGAG 2 cut(s) 322, 550
NmuCI GTSAC 4 cut(s) 25, 85, 802, 931
OliI CACNNNNGTG 1 cut(s) 596
PagI TCATGA 1 cut(s) 510
PdmI GAANNNNTTC 2 cut(s) 365, 1062
PkrI GCNGC 7 cut(s) 68, 304, 307, 700, 866, 940, 966
Ple19I CGATCG 3 cut(s) 984, 1000, 1024
PleI GAGTC 1 cut(s) 686
PluTI GGCGCC 1 cut(s) 799
PmaCI CACGTG 1 cut(s) 501
PmlI CACGTG 1 cut(s) 501
PpsI GAGTC 1 cut(s) 686
Ppu21I YACGTR 1 cut(s) 501
PpuMI RGGWCCY 2 cut(s) 492, 658
Psp124BI GAGCTC 3 cut(s) 518, 1053, 1110
Psp5II RGGWCCY 2 cut(s) 492, 658
Psp6I CCWGG 4 cut(s) 105, 579, 915, 1120
PspCI CACGTG 1 cut(s) 501
PspGI CCWGG 4 cut(s) 105, 579, 915, 1120
PspN4I GGNNCC 8 cut(s) 349, 493, 541, 578, 660, 797, 908, 1119
PspPI GGNCC 6 cut(s) 492, 522, 571, 576, 583, 658
PspPPI RGGWCCY 2 cut(s) 492, 658
PsuI RGATCY 2 cut(s) 528, 539
PvuI CGATCG 3 cut(s) 984, 1000, 1024
PvuII CAGCTG 1 cut(s) 217
RsaI GTAC 1 cut(s) 506
RsaNI GTAC 1 cut(s) 505
RseI CAYNNNNRTG 1 cut(s) 596
SacI GAGCTC 3 cut(s) 518, 1053, 1110
SalI GTCGAC 1 cut(s) 875
SatI GCNGC 7 cut(s) 67, 303, 306, 699, 865, 939, 965
Sau96I GGNCC 6 cut(s) 492, 522, 571, 576, 583, 658
SchI GAGTC 1 cut(s) 687
ScrFI CCNGG 4 cut(s) 107, 581, 917, 1122
SduI GDGCHC 4 cut(s) 518, 1009, 1053, 1110
SfaNI GCATC 2 cut(s) 986, 1067
SfoI GGCGCC 1 cut(s) 797
SinI GGWCC 4 cut(s) 492, 571, 576, 658
SmiMI CAYNNNNRTG 1 cut(s) 596
SpeI ACTAGT 1 cut(s) 82
Sse9I AATT 1 cut(s) 686
SspDI GGCGCC 1 cut(s) 795
SspMI CTAG 3 cut(s) 83, 419, 485
SstI GAGCTC 3 cut(s) 518, 1053, 1110
StyD4I CCNGG 4 cut(s) 105, 579, 915, 1120
StyI CCWWGG 1 cut(s) 1113
TaaI ACNGT 5 cut(s) 737, 759, 841, 850, 931
TaiI ACGT 3 cut(s) 503, 639, 804
TasI AATT 1 cut(s) 686
TauI GCSGC 5 cut(s) 305, 308, 867, 941, 967
TscAI CASTG 2 cut(s) 358, 429
TseFI GTSAC 4 cut(s) 25, 85, 802, 931
TseI GCWGC 2 cut(s) 66, 698
Tsp45I GTSAC 4 cut(s) 25, 85, 802, 931
TspDTI ATGAA 2 cut(s) 358, 499
TspGWI ACGGA 3 cut(s) 552, 772, 1053
TspRI CASTG 2 cut(s) 358, 429
VpaK11BI GGWCC 4 cut(s) 492, 571, 576, 658
XagI CCTNNNNNAGG 1 cut(s) 914
XapI RAATTY 1 cut(s) 686
XmiI GTMKAC 1 cut(s) 876
XmnI GAANNNNTTC 2 cut(s) 365, 1062
XspI CTAG 3 cut(s) 83, 419, 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.