Rorug01G0405400

Belongs to the short-chain dehydrogenases reductases (SDR) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000238
Physical Location & Seq
Reverse (-)
51203381 .. 51253152
49772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0405400.1

Sequence Viewer

Length: 1311 bp
ATGGCGAAGAGCAAGATCATCACTTTCTCTGTGTTCACTCTGATTCTCTATCTGTCAGCTCTGGCTATTGCAATTGCAGGCAGAGTAGCTGTGCCTCTGTTGCAATTCCAGGACGAACCCAGTTTCCTGACACCAACTTTTAGTCGCATTTACGATACTTCAATGTATGGTGCTCTGCAACTCAATAATGGATTGGCTCAAACGCCTCAAATGGGGTGGAATAGCTGGAATTTCTTTGCTTGTGATATTAATGAAACCGTGATCAAGGAAACAGCTGATGCGCTCATCTCAACCGGATTAGCTGATTTAGGTTATGTGTATGTCAATATAGATGATTGCTGGTCTTTACCAACACGAAATTCTGAGGGTCAACTGGTCTTTGATCCTAAAACATTTCCATCGGGAATTAAAGCTCTTGCCGATTATATACATGGGAAGGGCCTTAAGCTTGGAATATATTCTGATGCCGGGGTTTTTACATGTCAAGTTCGACCAGGTTCAATTTATCATGAAAGTGATGATGCCAAGCTGTTTGCTTCTTGGGACATAGATTATTTGAAGTATGACAACTGTTACAATCTGGGCATCCCACCAAAAGAACGGTACCCACCCATGCGTGAGGCCCTAAATGCATCTGGACGCACAATTTTCTATTCAATTTGTGAATGGGGTGTTGATGATCCTGCTTTATGGGCCGGGAGAGTTGGGAATAGTTGGCGTACAACAGATGATATCAATGATACATGGGCAAGCATGACTACAATTGCTGATTTGAATGACAAGTGGGCGTCGTATGCAGGACCTGGTGGATGGAATGATCCAGATATGTTGGAAGTTGGCAATGGAGGCATGAGTTACCAGGAATACCGTGCTCATTTTAGCATCTGGGCTTTGATGAAGGCCCCTCTTTTGATTGGTTGTGATGTTAGAAACATGACTGCAGAAACATACGAAATTCTGAGCAATGAGGAGGTTATTGCTATAAACCAAGATTCTCTTGGGGTTCAGGGAAGGAAAGTGAATGTTTCAGGAACAGATGGGGTCTATCAGGTTTGGGCGGGTCCTCTATCTGGACATCGTTTGGCTGTTGCTCTTTGGAATCGGGGTTCAACAGCAAAGACTATAACAGCTAAATGGGAAGCACTTGGACTGCAATCCAACATTAGTGTCTCAGTGAGAGATTTGTGGCAGCACAAACTAGTTACGGAGGATATCGTATCATCATTTGGTGCTCTGGTTGAAGCTCATGACTGTCACCTGTACCTCTTCACCCCCAAGACTGAGTCACTAAGTACTTTAGCCTTCGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
adh_short

Protein Analysis

436

Amino Acids

48.21

Weight (kDa)

4.84

Isoelectric Point (pI)

27.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Melibiase_2 PF16499 68 - 331 1.5e-79 Alpha galactosidase A
Melibiase_C PF17801 347 - 422 4.3e-18 Alpha galactosidase C-terminal beta sandwich domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000238)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11410 AT4G11410 AT4G23420 AT4G23420 AT4G23420 AT4G23420 AT4G23420 AT4G23430 AT4G23430 AT4G23430 AT4G23430
fragaria_vesca FvH4_4g28972 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02641 FvH4_5g02642 FvH4_5g02643 FvH4_5g02644 FvH4_7g29900 FvH4_7g29900 FvH4_7g29900
malus_domestica MD00G1173300.v1.1 MD01G1205400.v1.1 MD06G1085800.v1.1 MD07G1274000.v1.1 MD07G1274200.v1.1 MD07G1274300.v1.1 MD07G1274400.v1.1 MD07G1274500.v1.1 MD07G1274700.v1.1 MD07G1274800.v1.1 MD14G1106700.v1.1 MD14G1106800.v1.1
prunus_persica Prupe.2G298000_v2.0.a1 Prupe.2G298000_v2.0.a1 Prupe.2G298000_v2.0.a1 Prupe.2G298000_v2.0.a1 Prupe.2G298000_v2.0.a1 Prupe.5G101600_v2.0.a1 Prupe.5G101900_v2.0.a1 Prupe.5G102000_v2.0.a1
pyrus_communis pycom01g21490 pycom06g08190 pycom06g08200 pycom07g25040 pycom07g25050 pycom07g25060 pycom07g25070 pycom07g25090
rosa_chinensis RchiOBHm_Chr1g0377861 RchiOBHm_Chr1g0377871 RchiOBHm_Chr7g0196741 RchiOBHm_Chr7g0197221 RchiOBHm_Chr7g0197291 RchiOBHm_Chr7g0197361 RchiOBHm_Chr7g0197421 RchiOBHm_Chr7g0197431 RchiOBHm_Chr7g0197441 RchiOBHm_Chr7g0197571
rosa_laevigata RLG00000003940 RLG00000003941 RLG00000003943 RLG00000003949 RLG00000003993 RLG00000026490 RLG00000026491
rosa_multiflora Rmu_co8456741.1_g000001 Rmu_sc0001083.1_g000032 Rmu_sc0001164.1_g000006 Rmu_sc0003263.1_g000014 Rmu_sc0004824.1_g000009 Rmu_sc0005659.1_g000027 Rmu_sc0010019.1_g000002 Rmu_sc0012104.1_g000004 Rmu_sc0013422.1_g000001 Rmu_sc0017623.1_g000003 Rmu_sc0018035.1_g000001
rosa_roxburghii Rroxscaffold_3G00258340 Rroxscaffold_3G00258480 Rroxscaffold_3G00258490 Rroxscaffold_3G00258990 Rroxscaffold_4G00280990
rosa_rugosa Rorug01G0405400 Rorug07G0036000 Rorug07G0036100 Rorug07G0038800 Rorug07G0038900 Rorug07G0039300 Rorug07G0039400 Rorug07G0039500 Rorug07G0039500 Rorug07G0041500 Rorug07G0041600 Rorug07G0041600
rosa_samantha Rh1BG382700 Rh1BG382800 Rh1CG396600 Rh1DG413700 Rh1DG413800 Rh2AG350300 Rh2DG223200 Rh2DG543200 Rh7AG159900 Rh7AG163400 Rh7AG163500 Rh7AG164300 Rh7AG164600 Rh7AG164700 Rh7AG165900 Rh7BG162100 Rh7BG165400 Rh7BG166100 Rh7BG166600 Rh7BG166700 Rh7BG166800 Rh7BG166900 Rh7BG167900 Rh7DG161200 Rh7DG164800 Rh7DG165500 Rh7DG165900 Rh7DG166000 Rh7DG166100
rosa_wichuraiana Rw1G037190 Rw1G037200 Rw2G016470 Rw2G028400 Rw7G013980 Rw7G014270 Rw7G014330 Rw7G014340 Rw7G014350 Rw7G014360 Rw7G014450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 603
AccB1I GGYRCC 1 cut(s) 603
AciI CCGC 1 cut(s) 1058
AclWI GGATC 3 cut(s) 377, 674, 812
AcsI RAATTY 3 cut(s) 229, 358, 954
AcyI GRCGYC 1 cut(s) 788
AfaI GTAC 4 cut(s) 605, 721, 1262, 1294
AfiI CCNNNNNNNGG 2 cut(s) 212, 1070
AflII CTTAAG 1 cut(s) 443
AflIII ACRYGT 1 cut(s) 479
AgsI TTSAA 7 cut(s) 162, 501, 559, 657, 775, 1110, 1241
AhlI ACTAGT 1 cut(s) 1198
AjnI CCWGG 4 cut(s) 108, 493, 802, 858
AjuI GAANNNNNNNTTGG 2 cut(s) 343, 375
AloI GAACNNNNNNTCC 4 cut(s) 108, 140, 1090, 1122
Alw21I GWGCWC 3 cut(s) 175, 874, 1234
Alw26I GTCTC 1 cut(s) 1174
AlwI GGATC 3 cut(s) 377, 674, 812
AlwNI CAGNNNCTG 1 cut(s) 803
AoxI GGCC 4 cut(s) 439, 621, 693, 900
ApeKI GCWGC 1 cut(s) 1189
ApoI RAATTY 3 cut(s) 229, 358, 954
AseI ATTAAT 1 cut(s) 249
Asp700I GAANNNNTTC 1 cut(s) 457
Asp718I GGTACC 1 cut(s) 603
AspLEI GCGC 1 cut(s) 283
AspS9I GGNCC 6 cut(s) 439, 622, 693, 800, 901, 1061
AsuC2I CCSGG 2 cut(s) 469, 697
AsuHPI GGTGA 2 cut(s) 1247, 1261
AvaII GGWCC 2 cut(s) 800, 1061
BanI GGYRCC 1 cut(s) 603
Bbv12I GWGCWC 3 cut(s) 175, 874, 1234
BbvI GCAGC 1 cut(s) 1201
BccI CCATC 3 cut(s) 406, 804, 1031
BciT130I CCWGG 4 cut(s) 110, 495, 804, 860
BclI TGATCA 1 cut(s) 261
BcnI CCSGG 2 cut(s) 469, 697
BcoDI GTCTC 1 cut(s) 1174
BcuI ACTAGT 1 cut(s) 1198
BfaI CTAG 1 cut(s) 1199
BfmI CTRYAG 1 cut(s) 939
BfrI CTTAAG 1 cut(s) 443
BisI GCNGC 1 cut(s) 1190
BlsI GCNGC 1 cut(s) 1191
BmcAI AGTACT 1 cut(s) 1294
Bme1390I CCNGG 6 cut(s) 110, 469, 495, 697, 804, 860
Bme18I GGWCC 2 cut(s) 800, 1061
BmgT120I GGNCC 6 cut(s) 439, 622, 693, 800, 901, 1061
BmiI GGNNCC 3 cut(s) 605, 903, 1062
BmrFI CCNGG 6 cut(s) 110, 469, 495, 697, 804, 860
BmrI ACTGGG 1 cut(s) 114
BmsI GCATC 6 cut(s) 268, 454, 511, 594, 641, 891
BmuI ACTGGG 1 cut(s) 114
BpuMI CCSGG 2 cut(s) 469, 697
BsaHI GRCGYC 1 cut(s) 788
BsaJI CCNNGG 1 cut(s) 468
BsaWI WCCGGW 1 cut(s) 293
Bsc4I CCNNNNNNNGG 2 cut(s) 212, 1070
Bse1I ACTGG 2 cut(s) 120, 378
Bse3DI GCAATG 2 cut(s) 847, 970
BseBI CCWGG 4 cut(s) 110, 495, 804, 860
BseDI CCNNGG 1 cut(s) 468
BseGI GGATG 2 cut(s) 585, 815
BseLI CCNNNNNNNGG 2 cut(s) 212, 1070
BseMI GCAATG 2 cut(s) 847, 970
BseMII CTCAG 4 cut(s) 354, 950, 1185, 1272
BseNI ACTGG 2 cut(s) 120, 378
BseRI GAGGAG 1 cut(s) 983
BseXI GCAGC 1 cut(s) 1201
BshFI GGCC 4 cut(s) 441, 623, 695, 902
BshNI GGYRCC 1 cut(s) 603
BsiHKAI GWGCWC 3 cut(s) 175, 874, 1234
BsiSI CCGG 3 cut(s) 294, 468, 696
BslFI GGGAC 1 cut(s) 557
BslI CCNNNNNNNGG 2 cut(s) 212, 1070
BsmAI GTCTC 1 cut(s) 1174
BsmFI GGGAC 1 cut(s) 557
BsnI GGCC 4 cut(s) 441, 623, 695, 902
Bsp1286I GDGCHC 3 cut(s) 175, 874, 1234
Bsp143I GATC 5 cut(s) 15, 261, 382, 679, 817
BspACI CCGC 1 cut(s) 1058
BspANI GGCC 4 cut(s) 441, 623, 695, 902
BspCNI CTCAG 4 cut(s) 355, 951, 1184, 1273
BspHI TCATGA 2 cut(s) 508, 1246
BspLI GGNNCC 3 cut(s) 605, 903, 1062
BspMAI CTGCAG 1 cut(s) 943
BspPI GGATC 3 cut(s) 377, 674, 812
BspQI GCTCTTC 1 cut(s) 2
BspT107I GGYRCC 1 cut(s) 603
BspTI CTTAAG 1 cut(s) 443
BsrDI GCAATG 2 cut(s) 847, 970
BsrI ACTGG 2 cut(s) 120, 378
BssECI CCNNGG 1 cut(s) 468
BssMI GATC 5 cut(s) 15, 261, 382, 679, 817
BssNI GRCGYC 1 cut(s) 788
Bst2UI CCWGG 4 cut(s) 110, 495, 804, 860
Bst4CI ACNGT 5 cut(s) 259, 572, 603, 869, 1253
Bst6I CTCTTC 2 cut(s) 2, 1271
BstACI GRCGYC 1 cut(s) 788
BstAFI CTTAAG 1 cut(s) 443
BstC8I GCNNGC 2 cut(s) 79, 751
BstDEI CTNAG 5 cut(s) 363, 959, 1171, 1281, 1289
BstF5I GGATG 2 cut(s) 585, 815
BstHHI GCGC 1 cut(s) 283
BstKTI GATC 5 cut(s) 18, 264, 385, 682, 820
BstMAI GTCTC 1 cut(s) 1174
BstMBI GATC 5 cut(s) 15, 261, 382, 679, 817
BstMWI GCNNNNNNNGC 5 cut(s) 100, 629, 692, 794, 846
BstNI CCWGG 4 cut(s) 110, 495, 804, 860
BstNSI RCATGY 1 cut(s) 483
BstSCI CCNGG 6 cut(s) 108, 467, 493, 695, 802, 858
BstSFI CTRYAG 1 cut(s) 939
BstV1I GCAGC 1 cut(s) 1201
BsuRI GGCC 4 cut(s) 441, 623, 695, 902
BtsCI GGATG 2 cut(s) 585, 815
BtsIMutI CAGTG 1 cut(s) 1179
Cac8I GCNNGC 2 cut(s) 79, 751
CaiI CAGNNNCTG 1 cut(s) 803
CciI TCATGA 2 cut(s) 508, 1246
CfoI GCGC 1 cut(s) 283
Cfr13I GGNCC 6 cut(s) 439, 622, 693, 800, 901, 1061
CseI GACGC 2 cut(s) 648, 777
CsiI ACCWGGT 2 cut(s) 493, 802
Csp6I GTAC 4 cut(s) 604, 720, 1261, 1293
CspCI CAANNNNNGTGG 2 cut(s) 197, 232
CviAII CATG 9 cut(s) 431, 480, 509, 613, 744, 754, 850, 934, 1247
CviQI GTAC 4 cut(s) 604, 720, 1261, 1293
DdeI CTNAG 5 cut(s) 363, 959, 1171, 1281, 1289
DpnI GATC 5 cut(s) 17, 263, 384, 681, 819
DpnII GATC 5 cut(s) 15, 261, 382, 679, 817
Eam1104I CTCTTC 2 cut(s) 2, 1271
EarI CTCTTC 2 cut(s) 2, 1271
Eco32I GATATC 2 cut(s) 733, 1213
Eco47I GGWCC 2 cut(s) 800, 1061
EcoO109I RGGNCCY 5 cut(s) 439, 622, 800, 901, 1061
EcoRII CCWGG 4 cut(s) 108, 493, 802, 858
EcoRV GATATC 2 cut(s) 733, 1213
EcoT22I ATGCAT 1 cut(s) 634
FaeI CATG 9 cut(s) 434, 483, 512, 616, 747, 757, 853, 937, 1250
FalI AAGNNNNNCTT 2 cut(s) 981, 1013
FaqI GGGAC 1 cut(s) 557
FatI CATG 9 cut(s) 430, 479, 508, 612, 743, 753, 849, 933, 1246
FauI CCCGC 1 cut(s) 1051
FbaI TGATCA 1 cut(s) 261
Fnu4HI GCNGC 1 cut(s) 1190
FokI GGATG 2 cut(s) 572, 822
Fsp4HI GCNGC 1 cut(s) 1190
FspBI CTAG 1 cut(s) 1199
GlaI GCGC 1 cut(s) 282
GluI GCNGC 1 cut(s) 1190
HaeIII GGCC 4 cut(s) 441, 623, 695, 902
HapII CCGG 3 cut(s) 294, 468, 696
HgaI GACGC 2 cut(s) 648, 777
HhaI GCGC 1 cut(s) 283
Hin1I GRCGYC 1 cut(s) 788
Hin1II CATG 9 cut(s) 434, 483, 512, 616, 747, 757, 853, 937, 1250
Hin6I GCGC 1 cut(s) 281
HinP1I GCGC 1 cut(s) 281
HincII GTYRAC 1 cut(s) 371
HindII GTYRAC 1 cut(s) 371
HindIII AAGCTT 1 cut(s) 446
HinfI GANTC 4 cut(s) 43, 992, 1099, 1283
HpaII CCGG 3 cut(s) 294, 468, 696
HphI GGTGA 2 cut(s) 1247, 1261
Hpy166II GTNNAC 2 cut(s) 36, 371
Hpy188I TCNGA 4 cut(s) 42, 364, 463, 960
Hpy188III TCNNGA 8 cut(s) 127, 402, 509, 636, 821, 1029, 1071, 1247
Hpy8I GTNNAC 2 cut(s) 36, 371
Hpy99I CGWCG 1 cut(s) 793
HpyAV CCTTC 3 cut(s) 430, 892, 1005
HpyCH4III ACNGT 5 cut(s) 259, 572, 603, 869, 1253
HpyCH4V TGCA 8 cut(s) 71, 77, 103, 178, 632, 797, 941, 1153
HpyF10VI GCNNNNNNNGC 5 cut(s) 100, 629, 692, 794, 846
HpyF3I CTNAG 5 cut(s) 363, 959, 1171, 1281, 1289
Hsp92I GRCGYC 1 cut(s) 788
Hsp92II CATG 9 cut(s) 434, 483, 512, 616, 747, 757, 853, 937, 1250
HspAI GCGC 1 cut(s) 281
KpnI GGTACC 1 cut(s) 607
Ksp22I TGATCA 1 cut(s) 261
Kzo9I GATC 5 cut(s) 15, 261, 382, 679, 817
LguI GCTCTTC 1 cut(s) 2
Lsp1109I GCAGC 1 cut(s) 1201
LweI GCATC 6 cut(s) 268, 454, 511, 594, 641, 891
MabI ACCWGGT 2 cut(s) 493, 802
MaeI CTAG 1 cut(s) 1199
MaeIII GTNAC 5 cut(s) 572, 854, 1201, 1253, 1284
MalI GATC 5 cut(s) 17, 263, 384, 681, 819
MboI GATC 5 cut(s) 15, 261, 382, 679, 817
MboII GAAGA 2 cut(s) 19, 1258
MfeI CAATTG 2 cut(s) 72, 762
MhlI GDGCHC 3 cut(s) 175, 874, 1234
MlyI GAGTC 1 cut(s) 1292
MmeI TCCRAC 2 cut(s) 810, 1182
Mph1103I ATGCAT 1 cut(s) 634
MroXI GAANNNNTTC 1 cut(s) 457
MseI TTAA 4 cut(s) 249, 408, 444, 1309
MslI CAYNNNNRTG 1 cut(s) 513
MspA1I CMGCKG 1 cut(s) 275
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 3 cut(s) 294, 468, 696
MspR9I CCNGG 6 cut(s) 110, 469, 495, 697, 804, 860
MunI CAATTG 2 cut(s) 72, 762
MvaI CCWGG 4 cut(s) 110, 495, 804, 860
MwoI GCNNNNNNNGC 5 cut(s) 100, 629, 692, 794, 846
NciI CCSGG 2 cut(s) 469, 697
NdeII GATC 5 cut(s) 15, 261, 382, 679, 817
NlaIII CATG 9 cut(s) 434, 483, 512, 616, 747, 757, 853, 937, 1250
NlaIV GGNNCC 3 cut(s) 605, 903, 1062
NmuCI GTSAC 2 cut(s) 1253, 1284
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 1 cut(s) 483
PagI TCATGA 2 cut(s) 508, 1246
PciI ACATGT 1 cut(s) 479
PciSI GCTCTTC 1 cut(s) 2
PdmI GAANNNNTTC 1 cut(s) 457
PfeI GAWTC 3 cut(s) 43, 992, 1099
PflFI GACNNNGTC 1 cut(s) 1282
PfoI TCCNGGA 1 cut(s) 108
PkrI GCNGC 1 cut(s) 1191
PleI GAGTC 1 cut(s) 1291
PpsI GAGTC 1 cut(s) 1291
PpuMI RGGWCCY 2 cut(s) 800, 1061
PscI ACATGT 1 cut(s) 479
PshBI ATTAAT 1 cut(s) 249
Psp5II RGGWCCY 2 cut(s) 800, 1061
Psp6I CCWGG 4 cut(s) 108, 493, 802, 858
PspGI CCWGG 4 cut(s) 108, 493, 802, 858
PspN4I GGNNCC 3 cut(s) 605, 903, 1062
PspPI GGNCC 6 cut(s) 439, 622, 693, 800, 901, 1061
PspPPI RGGWCCY 2 cut(s) 800, 1061
PstI CTGCAG 1 cut(s) 943
PstNI CAGNNNCTG 1 cut(s) 803
PsyI GACNNNGTC 1 cut(s) 1282
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 4 cut(s) 605, 721, 1262, 1294
RsaNI GTAC 4 cut(s) 604, 720, 1261, 1293
RseI CAYNNNNRTG 1 cut(s) 513
SapI GCTCTTC 1 cut(s) 2
SaqAI TTAA 4 cut(s) 249, 408, 444, 1309
SatI GCNGC 1 cut(s) 1190
Sau3AI GATC 5 cut(s) 15, 261, 382, 679, 817
Sau96I GGNCC 6 cut(s) 439, 622, 693, 800, 901, 1061
ScaI AGTACT 1 cut(s) 1294
SchI GAGTC 1 cut(s) 1292
ScrFI CCNGG 6 cut(s) 110, 469, 495, 697, 804, 860
SduI GDGCHC 3 cut(s) 175, 874, 1234
SexAI ACCWGGT 2 cut(s) 493, 802
SfaNI GCATC 6 cut(s) 268, 454, 511, 594, 641, 891
SfcI CTRYAG 1 cut(s) 939
SinI GGWCC 2 cut(s) 800, 1061
SmiMI CAYNNNNRTG 1 cut(s) 513
SmlI CTYRAG 1 cut(s) 443
SmoI CTYRAG 1 cut(s) 443
SpeI ACTAGT 1 cut(s) 1198
SsiI CCGC 1 cut(s) 1058
SspMI CTAG 1 cut(s) 1199
StyD4I CCNGG 6 cut(s) 108, 467, 493, 695, 802, 858
TaaI ACNGT 5 cut(s) 259, 572, 603, 869, 1253
TaqI TCGA 1 cut(s) 490
TatI WGTACW 1 cut(s) 1292
TfiI GAWTC 3 cut(s) 43, 992, 1099
Tru1I TTAA 4 cut(s) 249, 408, 444, 1309
Tru9I TTAA 4 cut(s) 249, 408, 444, 1309
TscAI CASTG 1 cut(s) 1179
TseFI GTSAC 2 cut(s) 1253, 1284
TseI GCWGC 1 cut(s) 1189
Tsp45I GTSAC 2 cut(s) 1253, 1284
TspDTI ATGAA 3 cut(s) 267, 525, 911
TspGWI ACGGA 1 cut(s) 1220
TspRI CASTG 1 cut(s) 1179
Tth111I GACNNNGTC 1 cut(s) 1282
Vha464I CTTAAG 1 cut(s) 443
VpaK11BI GGWCC 2 cut(s) 800, 1061
VspI ATTAAT 1 cut(s) 249
XapI RAATTY 3 cut(s) 229, 358, 954
XceI RCATGY 1 cut(s) 483
XcmI CCANNNNNNNNNTGG 1 cut(s) 995
XmnI GAANNNNTTC 1 cut(s) 457
XspI CTAG 1 cut(s) 1199
ZrmI AGTACT 1 cut(s) 1294
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.