Rorug07G0039500

Short-chain dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000238
Physical Location & Seq
Forward (+)
2780351 .. 2782755
2405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0039500.1

Sequence Viewer

Length: 1065 bp
ATGGGAAGACCACCTTGCTGTGACAAAGTTGGAGTGAAAAAAGGGCCATGGACGCCGGAGGAAGACATCATCTTGGTGTCGTACATTCAAGAACACGGCCCTGGGAATTGGAGATCAGTTCCTACCAACACAGGTTTGATGAGATGCAGTAAGAGCTGCCGGCTTAGATGGACTAATTATCTCCGGCCGGGCATCAAACGCGGTAACTTCACCGACCATGAGGAGAAGATGATCATCCACCTCCAAGCTCTTCTAGGCAATAGATGGGCTGCCATAGCTTCCTACCTTCCTCAGAGAACAGACAATGATATAAAGAATTACTGGAACACCCACCTGAAGAAGAAACTCAGAAAGCTCCAGACAGGTACTGCTGAAGACGGTATTTCAGGTAATTCACAGCAGCCAATTTCAAAGGGTCAGTGGGAGAGAAGGCTCCAAACAGACATTCACATGGCCAAACAAGCCCTTTGTGAGGCTCTCTCCCTTGACAAACCAAGTCATGATCATCACCATGTGCCAGACTTAAAGCCCTCACTCTCCAATATTAATGGCACTACTAGTACTACTACTAGACCTCACCAAGCATCCACATACGCGTCCAACACCGAAAACATTGCTCGATTGCTCGAAAACTGGATGAAAAGTTCACCAAAAGTTCGAACAAACTCCTCGGATGATCATCAAACCCAGATTCATCATCAGAATATGCTCAACAATGGTTCCAGTTCTAGTACTACCGACGGGGCACACAGTGGGACAACATCTACACCGGACCATCATGAACACCATGGTTTTGATTCCTTGTTTAGTAGCTTCAACTCATCCACATTATCCGATAATGCGTCGACTCATTTATCAGCAGAAAATAATCATCGTCAAACTAGTACTACTACTACTAATAATAATACTGGTCTCATGATGTTCCAAGACGAAAGCAAGCCTGATTTAGAGGCGGCCGCGGGAGCAGCAGCAGCAGTAGATCAAGTGCCTCTCACATTGCTGGAGAAGTGGCTCTTTGATGACGCTACTGCACATCAAGCTCATGATCAAGACATGCTGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
adh_short

Protein Analysis

354

Amino Acids

39.5

Weight (kDa)

6.74

Isoelectric Point (pI)

34.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 14 - 61 1.8e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 17 - 76 1.3e-10 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 67 - 112 1.7e-14 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 70 - 118 2.8e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000238)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G11410 AT4G11410 AT4G23420 AT4G23420 AT4G23420 AT4G23420 AT4G23420 AT4G23430 AT4G23430 AT4G23430 AT4G23430
fragaria_vesca FvH4_4g28972 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02640 FvH4_5g02641 FvH4_5g02642 FvH4_5g02643 FvH4_5g02644 FvH4_7g29900 FvH4_7g29900 FvH4_7g29900
malus_domestica MD00G1173300.v1.1 MD01G1205400.v1.1 MD06G1085800.v1.1 MD07G1274000.v1.1 MD07G1274200.v1.1 MD07G1274300.v1.1 MD07G1274400.v1.1 MD07G1274500.v1.1 MD07G1274700.v1.1 MD07G1274800.v1.1 MD14G1106700.v1.1 MD14G1106800.v1.1
prunus_persica Prupe.2G298000_v2.0.a1 Prupe.2G298000_v2.0.a1 Prupe.2G298000_v2.0.a1 Prupe.2G298000_v2.0.a1 Prupe.2G298000_v2.0.a1 Prupe.5G101600_v2.0.a1 Prupe.5G101900_v2.0.a1 Prupe.5G102000_v2.0.a1
pyrus_communis pycom01g21490 pycom06g08190 pycom06g08200 pycom07g25040 pycom07g25050 pycom07g25060 pycom07g25070 pycom07g25090
rosa_chinensis RchiOBHm_Chr1g0377861 RchiOBHm_Chr1g0377871 RchiOBHm_Chr7g0196741 RchiOBHm_Chr7g0197221 RchiOBHm_Chr7g0197291 RchiOBHm_Chr7g0197361 RchiOBHm_Chr7g0197421 RchiOBHm_Chr7g0197431 RchiOBHm_Chr7g0197441 RchiOBHm_Chr7g0197571
rosa_laevigata RLG00000003940 RLG00000003941 RLG00000003943 RLG00000003949 RLG00000003993 RLG00000026490 RLG00000026491
rosa_multiflora Rmu_co8456741.1_g000001 Rmu_sc0001083.1_g000032 Rmu_sc0001164.1_g000006 Rmu_sc0003263.1_g000014 Rmu_sc0004824.1_g000009 Rmu_sc0005659.1_g000027 Rmu_sc0010019.1_g000002 Rmu_sc0012104.1_g000004 Rmu_sc0013422.1_g000001 Rmu_sc0017623.1_g000003 Rmu_sc0018035.1_g000001
rosa_roxburghii Rroxscaffold_3G00258340 Rroxscaffold_3G00258480 Rroxscaffold_3G00258490 Rroxscaffold_3G00258990 Rroxscaffold_4G00280990
rosa_rugosa Rorug01G0405400 Rorug07G0036000 Rorug07G0036100 Rorug07G0038800 Rorug07G0038900 Rorug07G0039300 Rorug07G0039400 Rorug07G0039500 Rorug07G0039500 Rorug07G0041500 Rorug07G0041600 Rorug07G0041600
rosa_samantha Rh1BG382700 Rh1BG382800 Rh1CG396600 Rh1DG413700 Rh1DG413800 Rh2AG350300 Rh2DG223200 Rh2DG543200 Rh7AG159900 Rh7AG163400 Rh7AG163500 Rh7AG164300 Rh7AG164600 Rh7AG164700 Rh7AG165900 Rh7BG162100 Rh7BG165400 Rh7BG166100 Rh7BG166600 Rh7BG166700 Rh7BG166800 Rh7BG166900 Rh7BG167900 Rh7DG161200 Rh7DG164800 Rh7DG165500 Rh7DG165900 Rh7DG166000 Rh7DG166100
rosa_wichuraiana Rw1G037190 Rw1G037200 Rw2G016470 Rw2G028400 Rw7G013980 Rw7G014270 Rw7G014330 Rw7G014340 Rw7G014350 Rw7G014360 Rw7G014450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 845
AccII CGCG 3 cut(s) 201, 596, 959
AciI CCGC 4 cut(s) 201, 953, 957, 959
AcoI YGGCCR 3 cut(s) 185, 453, 954
AcuI CTGAAG 2 cut(s) 356, 393
AcyI GRCGYC 1 cut(s) 53
AdeI CACNNNGTG 2 cut(s) 514, 752
AfaI GTAC 5 cut(s) 83, 367, 562, 733, 886
AfiI CCNNNNNNNGG 1 cut(s) 472
AflIII ACRYGT 1 cut(s) 594
AgsI TTSAA 3 cut(s) 89, 411, 817
AhlI ACTAGT 2 cut(s) 557, 881
AjnI CCWGG 1 cut(s) 100
AjuI GAANNNNNNNTTGG 2 cut(s) 429, 461
AloI GAACNNNNNNTCC 2 cut(s) 628, 660
AluBI AGCT 6 cut(s) 156, 248, 278, 355, 813, 1040
AluI AGCT 6 cut(s) 156, 248, 278, 355, 813, 1040
Alw26I GTCTC 1 cut(s) 917
AlwNI CAGNNNCTG 1 cut(s) 368
AoxI GGCC 5 cut(s) 44, 97, 185, 453, 954
ApeKI GCWGC 6 cut(s) 156, 269, 400, 965, 968, 971
AseI ATTAAT 1 cut(s) 546
AspS9I GGNCC 3 cut(s) 44, 98, 772
AsuC2I CCSGG 1 cut(s) 189
AsuHPI GGTGA 4 cut(s) 202, 500, 569, 639
AsuII TTCGAA 1 cut(s) 658
AvaII GGWCC 1 cut(s) 772
BaeGI GKGCMC 1 cut(s) 748
BalI TGGCCA 1 cut(s) 455
BbsI GAAGAC 3 cut(s) 13, 69, 381
BbvI GCAGC 6 cut(s) 143, 256, 412, 977, 980, 983
BccI CCATC 3 cut(s) 162, 258, 783
BceAI ACGGC 1 cut(s) 112
BcgI CGANNNNNNTGC 2 cut(s) 596, 630
BciT130I CCWGG 1 cut(s) 102
BclI TGATCA 4 cut(s) 231, 502, 676, 1045
BcnI CCSGG 1 cut(s) 189
BcoDI GTCTC 1 cut(s) 917
BcuI ACTAGT 2 cut(s) 557, 881
BfaI CTAG 5 cut(s) 254, 558, 570, 729, 882
BisI GCNGC 8 cut(s) 157, 270, 401, 954, 957, 966, 969, 972
BlsI GCNGC 8 cut(s) 158, 271, 402, 955, 958, 967, 970, 973
BmcAI AGTACT 3 cut(s) 562, 733, 886
Bme1390I CCNGG 2 cut(s) 102, 189
Bme18I GGWCC 1 cut(s) 772
BmgT120I GGNCC 3 cut(s) 44, 98, 772
BmiI GGNNCC 2 cut(s) 434, 721
BmrFI CCNGG 2 cut(s) 102, 189
BmsI GCATC 3 cut(s) 134, 201, 593
BpiI GAAGAC 3 cut(s) 13, 69, 381
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpmI CTGGAG 2 cut(s) 341, 1022
Bpu14I TTCGAA 1 cut(s) 658
BpuMI CCSGG 1 cut(s) 189
BsaBI GATNNNNATC 2 cut(s) 233, 678
BsaHI GRCGYC 1 cut(s) 53
BsaI GGTCTC 1 cut(s) 917
BsaJI CCNNGG 6 cut(s) 47, 100, 101, 669, 787, 957
BsaWI WCCGGW 1 cut(s) 769
Bsc4I CCNNNNNNNGG 1 cut(s) 472
Bse118I RCCGGY 1 cut(s) 159
Bse1I ACTGG 4 cut(s) 326, 638, 723, 913
Bse3DI GCAATG 2 cut(s) 612, 995
Bse8I GATNNNNATC 2 cut(s) 233, 678
BseBI CCWGG 1 cut(s) 102
BseDI CCNNGG 6 cut(s) 47, 100, 101, 669, 787, 957
BseGI GGATG 5 cut(s) 234, 584, 642, 679, 821
BseJI GATNNNNATC 2 cut(s) 233, 678
BseLI CCNNNNNNNGG 1 cut(s) 472
BseMI GCAATG 2 cut(s) 612, 995
BseMII CTCAG 2 cut(s) 305, 361
BseNI ACTGG 4 cut(s) 326, 638, 723, 913
BseRI GAGGAG 2 cut(s) 236, 658
BseSI GKGCMC 1 cut(s) 748
BseX3I CGGCCG 2 cut(s) 185, 954
BseXI GCAGC 6 cut(s) 143, 256, 412, 977, 980, 983
BsgI GTGCAG 1 cut(s) 1014
Bsh1236I CGCG 3 cut(s) 201, 596, 959
Bsh1285I CGRYCG 2 cut(s) 188, 957
BshFI GGCC 5 cut(s) 46, 99, 187, 455, 956
BsiEI CGRYCG 2 cut(s) 188, 957
BsiSI CCGG 5 cut(s) 56, 160, 184, 188, 770
BslFI GGGAC 1 cut(s) 769
BslI CCNNNNNNNGG 1 cut(s) 472
BsmAI GTCTC 1 cut(s) 917
BsmFI GGGAC 1 cut(s) 769
BsnI GGCC 5 cut(s) 46, 99, 187, 455, 956
Bso31I GGTCTC 1 cut(s) 917
Bsp119I TTCGAA 1 cut(s) 658
Bsp1286I GDGCHC 1 cut(s) 748
Bsp143I GATC 6 cut(s) 113, 231, 502, 676, 979, 1045
Bsp19I CCATGG 2 cut(s) 47, 787
BspACI CCGC 4 cut(s) 201, 953, 957, 959
BspANI GGCC 5 cut(s) 46, 99, 187, 455, 956
BspCNI CTCAG 2 cut(s) 304, 360
BspFNI CGCG 3 cut(s) 201, 596, 959
BspHI TCATGA 4 cut(s) 499, 778, 915, 1042
BspLI GGNNCC 2 cut(s) 434, 721
BspQI GCTCTTC 1 cut(s) 255
BspT104I TTCGAA 1 cut(s) 658
BspTNI GGTCTC 1 cut(s) 917
BsrDI GCAATG 2 cut(s) 612, 995
BsrFI RCCGGY 1 cut(s) 159
BsrI ACTGG 4 cut(s) 326, 638, 723, 913
BssAI RCCGGY 1 cut(s) 159
BssECI CCNNGG 6 cut(s) 47, 100, 101, 669, 787, 957
BssMI GATC 6 cut(s) 113, 231, 502, 676, 979, 1045
BssNI GRCGYC 1 cut(s) 53
BssT1I CCWWGG 2 cut(s) 47, 787
Bst2UI CCWGG 1 cut(s) 102
Bst4CI ACNGT 2 cut(s) 380, 752
Bst6I CTCTTC 1 cut(s) 255
BstACI GRCGYC 1 cut(s) 53
BstBI TTCGAA 1 cut(s) 658
BstC8I GCNNGC 2 cut(s) 161, 938
BstDEI CTNAG 3 cut(s) 164, 291, 347
BstDSI CCRYGG 3 cut(s) 47, 787, 957
BstENI CCTNNNNNAGG 1 cut(s) 470
BstF5I GGATG 5 cut(s) 234, 584, 642, 679, 821
BstFNI CGCG 3 cut(s) 201, 596, 959
BstKTI GATC 6 cut(s) 116, 234, 505, 679, 982, 1048
BstMAI GTCTC 1 cut(s) 917
BstMBI GATC 6 cut(s) 113, 231, 502, 676, 979, 1045
BstMCI CGRYCG 2 cut(s) 188, 957
BstMWI GCNNNNNNNGC 9 cut(s) 52, 153, 198, 275, 461, 962, 965, 971, 1037
BstNI CCWGG 1 cut(s) 102
BstNSI RCATGY 1 cut(s) 1057
BstSCI CCNGG 2 cut(s) 100, 187
BstSLI GKGCMC 1 cut(s) 748
BstUI CGCG 3 cut(s) 201, 596, 959
BstV1I GCAGC 6 cut(s) 143, 256, 412, 977, 980, 983
BstV2I GAAGAC 3 cut(s) 13, 69, 381
BstZI CGGCCG 2 cut(s) 185, 954
BsuRI GGCC 5 cut(s) 46, 99, 187, 455, 956
BtgI CCRYGG 3 cut(s) 47, 787, 957
BtsCI GGATG 5 cut(s) 234, 584, 642, 679, 821
BtsIMutI CAGTG 2 cut(s) 425, 757
Cac8I GCNNGC 2 cut(s) 161, 938
CaiI CAGNNNCTG 1 cut(s) 368
CciI TCATGA 4 cut(s) 499, 778, 915, 1042
CciNI GCGGCCGC 1 cut(s) 954
Cfr10I RCCGGY 1 cut(s) 159
Cfr13I GGNCC 3 cut(s) 44, 98, 772
Cfr42I CCGCGG 1 cut(s) 960
CseI GACGC 4 cut(s) 61, 585, 831, 1031
Csp6I GTAC 5 cut(s) 82, 366, 561, 732, 885
CviQI GTAC 5 cut(s) 82, 366, 561, 732, 885
DdeI CTNAG 3 cut(s) 164, 291, 347
DpnI GATC 6 cut(s) 115, 233, 504, 678, 981, 1047
DpnII GATC 6 cut(s) 113, 231, 502, 676, 979, 1045
DraIII CACNNNGTG 2 cut(s) 514, 752
EaeI YGGCCR 3 cut(s) 185, 453, 954
EagI CGGCCG 2 cut(s) 185, 954
Eam1104I CTCTTC 1 cut(s) 255
EarI CTCTTC 1 cut(s) 255
EclXI CGGCCG 2 cut(s) 185, 954
Eco130I CCWWGG 2 cut(s) 47, 787
Eco31I GGTCTC 1 cut(s) 917
Eco47I GGWCC 1 cut(s) 772
Eco52I CGGCCG 2 cut(s) 185, 954
Eco57I CTGAAG 2 cut(s) 356, 393
EcoNI CCTNNNNNAGG 1 cut(s) 470
EcoRII CCWGG 1 cut(s) 100
EcoT14I CCWWGG 2 cut(s) 47, 787
ErhI CCWWGG 2 cut(s) 47, 787
FalI AAGNNNNNCTT 3 cut(s) 30, 998, 1030
FaqI GGGAC 1 cut(s) 769
FauI CCCGC 1 cut(s) 952
FbaI TGATCA 4 cut(s) 231, 502, 676, 1045
FblI GTMKAC 1 cut(s) 845
Fnu4HI GCNGC 8 cut(s) 157, 270, 401, 954, 957, 966, 969, 972
FokI GGATG 5 cut(s) 221, 571, 649, 686, 808
Fsp4HI GCNGC 8 cut(s) 157, 270, 401, 954, 957, 966, 969, 972
FspBI CTAG 5 cut(s) 254, 558, 570, 729, 882
GluI GCNGC 8 cut(s) 157, 270, 401, 954, 957, 966, 969, 972
GsuI CTGGAG 2 cut(s) 341, 1022
HaeIII GGCC 5 cut(s) 46, 99, 187, 455, 956
HapII CCGG 5 cut(s) 56, 160, 184, 188, 770
HgaI GACGC 4 cut(s) 61, 585, 831, 1031
Hin1I GRCGYC 1 cut(s) 53
HincII GTYRAC 1 cut(s) 846
HindII GTYRAC 1 cut(s) 846
HinfI GANTC 3 cut(s) 691, 797, 847
HpaII CCGG 5 cut(s) 56, 160, 184, 188, 770
HphI GGTGA 4 cut(s) 202, 500, 569, 639
Hpy166II GTNNAC 2 cut(s) 647, 846
Hpy188I TCNGA 5 cut(s) 294, 350, 673, 702, 835
Hpy188III TCNNGA 7 cut(s) 89, 358, 500, 779, 916, 1043, 1049
Hpy8I GTNNAC 2 cut(s) 647, 846
Hpy99I CGWCG 2 cut(s) 743, 847
HpyAV CCTTC 2 cut(s) 296, 423
HpyCH4III ACNGT 2 cut(s) 380, 752
HpyCH4V TGCA 2 cut(s) 147, 1031
HpyF10VI GCNNNNNNNGC 9 cut(s) 52, 153, 198, 275, 461, 962, 965, 971, 1037
HpyF3I CTNAG 3 cut(s) 164, 291, 347
Hsp92I GRCGYC 1 cut(s) 53
KroI GCCGGC 1 cut(s) 159
KroNI GCCGGC 1 cut(s) 161
Ksp22I TGATCA 4 cut(s) 231, 502, 676, 1045
KspI CCGCGG 1 cut(s) 960
Kzo9I GATC 6 cut(s) 113, 231, 502, 676, 979, 1045
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 3 cut(s) 360, 438, 962
Lsp1109I GCAGC 6 cut(s) 143, 256, 412, 977, 980, 983
LweI GCATC 3 cut(s) 134, 201, 593
MaeI CTAG 5 cut(s) 254, 558, 570, 729, 882
MaeIII GTNAC 2 cut(s) 20, 203
MalI GATC 6 cut(s) 115, 233, 504, 678, 981, 1047
MboI GATC 6 cut(s) 113, 231, 502, 676, 979, 1045
MboII GAAGA 7 cut(s) 18, 74, 238, 242, 349, 352, 386
MhlI GDGCHC 1 cut(s) 748
MlsI TGGCCA 1 cut(s) 455
MluCI AATT 5 cut(s) 106, 175, 316, 391, 405
MluI ACGCGT 1 cut(s) 594
MluNI TGGCCA 1 cut(s) 455
MlyI GAGTC 1 cut(s) 841
MmeI TCCRAC 2 cut(s) 10, 624
Mox20I TGGCCA 1 cut(s) 455
MroNI GCCGGC 1 cut(s) 159
MscI TGGCCA 1 cut(s) 455
MseI TTAA 3 cut(s) 524, 546, 1063
MslI CAYNNNNRTG 3 cut(s) 74, 449, 510
Msp20I TGGCCA 1 cut(s) 455
MspA1I CMGCKG 1 cut(s) 959
MspI CCGG 5 cut(s) 56, 160, 184, 188, 770
MspR9I CCNGG 2 cut(s) 102, 189
MvaI CCWGG 1 cut(s) 102
MvnI CGCG 3 cut(s) 201, 596, 959
MwoI GCNNNNNNNGC 9 cut(s) 52, 153, 198, 275, 461, 962, 965, 971, 1037
NaeI GCCGGC 1 cut(s) 161
NciI CCSGG 1 cut(s) 189
NcoI CCATGG 2 cut(s) 47, 787
NdeII GATC 6 cut(s) 113, 231, 502, 676, 979, 1045
NgoMIV GCCGGC 1 cut(s) 159
NlaIV GGNNCC 2 cut(s) 434, 721
NmuCI GTSAC 1 cut(s) 20
NotI GCGGCCGC 1 cut(s) 954
NspI RCATGY 1 cut(s) 1057
NspV TTCGAA 1 cut(s) 658
PagI TCATGA 4 cut(s) 499, 778, 915, 1042
PasI CCCWGGG 1 cut(s) 101
PciSI GCTCTTC 1 cut(s) 255
PdiI GCCGGC 1 cut(s) 161
PfeI GAWTC 2 cut(s) 691, 797
PkrI GCNGC 8 cut(s) 158, 271, 402, 955, 958, 967, 970, 973
PleI GAGTC 1 cut(s) 841
PpsI GAGTC 1 cut(s) 841
PshBI ATTAAT 1 cut(s) 546
Psp6I CCWGG 1 cut(s) 100
PspGI CCWGG 1 cut(s) 100
PspN4I GGNNCC 2 cut(s) 434, 721
PspPI GGNCC 3 cut(s) 44, 98, 772
PstNI CAGNNNCTG 1 cut(s) 368
RsaI GTAC 5 cut(s) 83, 367, 562, 733, 886
RsaNI GTAC 5 cut(s) 82, 366, 561, 732, 885
RseI CAYNNNNRTG 3 cut(s) 74, 449, 510
SacII CCGCGG 1 cut(s) 960
SalI GTCGAC 1 cut(s) 844
SapI GCTCTTC 1 cut(s) 255
SaqAI TTAA 3 cut(s) 524, 546, 1063
SatI GCNGC 8 cut(s) 157, 270, 401, 954, 957, 966, 969, 972
Sau3AI GATC 6 cut(s) 113, 231, 502, 676, 979, 1045
Sau96I GGNCC 3 cut(s) 44, 98, 772
ScaI AGTACT 3 cut(s) 562, 733, 886
SchI GAGTC 1 cut(s) 841
ScrFI CCNGG 2 cut(s) 102, 189
SduI GDGCHC 1 cut(s) 748
SfaNI GCATC 3 cut(s) 134, 201, 593
Sfr303I CCGCGG 1 cut(s) 960
SfuI TTCGAA 1 cut(s) 658
SgrBI CCGCGG 1 cut(s) 960
SinI GGWCC 1 cut(s) 772
SmiMI CAYNNNNRTG 3 cut(s) 74, 449, 510
SpeI ACTAGT 2 cut(s) 557, 881
Sse9I AATT 5 cut(s) 106, 175, 316, 391, 405
SsiI CCGC 4 cut(s) 201, 953, 957, 959
SspI AATATT 1 cut(s) 544
SspMI CTAG 5 cut(s) 254, 558, 570, 729, 882
StyD4I CCNGG 2 cut(s) 100, 187
StyI CCWWGG 2 cut(s) 47, 787
TaaI ACNGT 2 cut(s) 380, 752
TaqI TCGA 4 cut(s) 619, 627, 658, 845
TasI AATT 5 cut(s) 106, 175, 316, 391, 405
TatI WGTACW 3 cut(s) 560, 731, 884
TauI GCSGC 2 cut(s) 956, 959
TfiI GAWTC 2 cut(s) 691, 797
Tru1I TTAA 3 cut(s) 524, 546, 1063
Tru9I TTAA 3 cut(s) 524, 546, 1063
TscAI CASTG 2 cut(s) 425, 757
TseFI GTSAC 1 cut(s) 20
TseI GCWGC 6 cut(s) 156, 269, 400, 965, 968, 971
Tsp45I GTSAC 1 cut(s) 20
TspDTI ATGAA 3 cut(s) 653, 683, 795
TspRI CASTG 2 cut(s) 425, 757
VpaK11BI GGWCC 1 cut(s) 772
VspI ATTAAT 1 cut(s) 546
XagI CCTNNNNNAGG 1 cut(s) 470
XceI RCATGY 1 cut(s) 1057
XmiI GTMKAC 1 cut(s) 845
XspI CTAG 5 cut(s) 254, 558, 570, 729, 882
ZrmI AGTACT 3 cut(s) 562, 733, 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.