Prupe.3G012600_v2.0.a1

protein DJ-1 homolog D-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
838282 .. 840177
1896 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G012600.1

Sequence Viewer

Length: 1143 bp
ATGGGGAATCCGAAAGGCGAGGTGCAGAGGAGGGTGTTGTTACTGTGCGGGGACTACATGGAAGATTACGAGGCAATGGTCCCATTTCAAGCACTGCAGGCATTTGGAGTCTCTGTTGATGCAGTTTCTCCTGTCAAGAAAGCTGGTGATATCTGCGCCACTGCCATAACCATTCAAGTAGAGTCCACTGACCAGGCTAATAAAGAATCTCGTGGTCACAATTTCACACTGAATGCAACATTTGATGACATCGAAATTGACAAATATGATGGTCTAGTTATACCAGGAGGACGATCTCCTGAACATCTTGCTATGAAGGCATCCGTTGTAGAATTGGCGAGAAAATTTTCTGACTGCAGAAAGCCAATTGCTGCTATTTGCCATGGGCTGTTGGTCTTAGCACCTGCAGGCGCTGTTAAAGGTCGCAAATGCACCGCGGTTTCAACTATGAAACCTGGATTGGTTGCTGCTGGTGCTCACTGGGTAGAACCCGATACATTGTCAGTGTGTGTTGCTGATGATAATTTAATTACTGGGGCACTGGGAGGCAAAATATGTGCTTCAGAGAGAAGGGTCCTCATCATCATTGGAAACTACGCGGAAGATTATGAGGTAACTGTGCCTTATCAGACCCTCAAAGTTCTAGGATGCCATGTTGATGTGGTTTGCCCCAAGAAGAAAGCCGGTGATACCTGCCCAACTGCTATCCGTGATCTTGAAGGGGGCCAAACCTACAGTGAGATCCGGGGACATAATTTTGTTTTAACAGCTGACTTTGAATCCATAGATGCCTCAAGTTATGACGCTCTTGTACTCCCTGGAGGTAAAGCTCCAGAGTTTTTGGCACTAAAGGAGGATGTTATTGTACTAGTGAAACAATTTATGGAAGCCGGGAAACCAGTTGCATCCATCTGCCATGGCCTGGAAATTTTAGTTGCTGCTGGTGTTCTGCAGGGGAAGAAATGTACTGGATACCCAGGGATTAAGGCTCGTGTGGTTTCGTCAGGAGGGACGTTTGTGGAAGCGGATCCAATAGATCGTTGTGTCACTGATGGAAATCTGGTTACCGCAGCAGCGTGGCATGGCCAACCAGAGCTTATTTCTCAGTTGATGAGATTGCTTGATATTCGAGTATCATTCTAG

Protein Analysis

381

Amino Acids

40.47

Weight (kDa)

5.56

Isoelectric Point (pI)

34.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 412
Acc36I ACCTGC 2 cut(s) 412, 701
AccB7I CCANNNNNTGG 1 cut(s) 922
AccII CGCG 2 cut(s) 437, 599
AciI CCGC 6 cut(s) 48, 435, 437, 599, 1025, 1068
AclWI GGATC 3 cut(s) 736, 1022, 1035
AcoI YGGCCR 1 cut(s) 1084
AcsI RAATTY 2 cut(s) 344, 927
AcuI CTGAAG 1 cut(s) 546
AfaI GTAC 3 cut(s) 813, 867, 967
AfiI CCNNNNNNNGG 1 cut(s) 922
AgsI TTSAA 5 cut(s) 89, 176, 444, 719, 779
AhlI ACTAGT 1 cut(s) 868
AjnI CCWGG 6 cut(s) 192, 283, 454, 817, 921, 976
AjuI GAANNNNNNNTTGG 2 cut(s) 443, 475
AluBI AGCT 4 cut(s) 143, 770, 830, 1096
AluI AGCT 4 cut(s) 143, 770, 830, 1096
Alw21I GWGCWC 1 cut(s) 478
Alw26I GTCTC 1 cut(s) 115
AlwI GGATC 3 cut(s) 736, 1022, 1035
AlwNI CAGNNNCTG 1 cut(s) 413
AoxI GGCC 3 cut(s) 724, 919, 1084
ApeKI GCWGC 5 cut(s) 371, 467, 938, 1070, 1073
ApoI RAATTY 2 cut(s) 344, 927
Asp700I GAANNNNTTC 1 cut(s) 346
AspLEI GCGC 2 cut(s) 158, 413
AspS9I GGNCC 3 cut(s) 79, 574, 724
AsuC2I CCSGG 2 cut(s) 746, 892
AsuHPI GGTGA 2 cut(s) 158, 698
AvaII GGWCC 2 cut(s) 79, 574
BaeGI GKGCMC 1 cut(s) 541
BalI TGGCCA 1 cut(s) 1086
BamHI GGATCC 1 cut(s) 1027
BauI CACGAG 2 cut(s) 210, 990
Bbv12I GWGCWC 1 cut(s) 478
BbvI GCAGC 5 cut(s) 358, 454, 925, 1082, 1085
BccI CCATC 3 cut(s) 263, 917, 1046
BciT130I CCWGG 6 cut(s) 194, 285, 456, 819, 923, 978
BciVI GTATCC 1 cut(s) 965
BcnI CCSGG 2 cut(s) 746, 892
BcoDI GTCTC 1 cut(s) 115
BcuI ACTAGT 1 cut(s) 868
BfaI CTAG 4 cut(s) 275, 644, 869, 1141
BfmI CTRYAG 5 cut(s) 95, 355, 405, 733, 950
BfoI RGCGCY 1 cut(s) 414
BfuAI ACCTGC 2 cut(s) 412, 701
BfuI GTATCC 1 cut(s) 965
BisI GCNGC 5 cut(s) 372, 468, 939, 1071, 1074
BlsI GCNGC 5 cut(s) 373, 469, 940, 1072, 1075
Bme1390I CCNGG 8 cut(s) 194, 285, 456, 746, 819, 892, 923, 978
Bme18I GGWCC 2 cut(s) 79, 574
BmgT120I GGNCC 3 cut(s) 79, 574, 724
BmiI GGNNCC 4 cut(s) 81, 575, 725, 1029
BmrFI CCNGG 8 cut(s) 194, 285, 456, 746, 819, 892, 923, 978
BmrI ACTGGG 3 cut(s) 490, 543, 551
BmsI GCATC 5 cut(s) 109, 329, 638, 778, 914
BmuI ACTGGG 3 cut(s) 490, 543, 551
BpmI CTGGAG 2 cut(s) 816, 840
BpuEI CTTGAG 1 cut(s) 778
BpuMI CCSGG 2 cut(s) 746, 892
BsaBI GATNNNNATC 1 cut(s) 1056
BsaJI CCNNGG 7 cut(s) 382, 435, 745, 817, 916, 976, 977
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 1 cut(s) 922
Bse118I RCCGGY 1 cut(s) 683
Bse1I ACTGG 5 cut(s) 485, 538, 546, 899, 973
Bse3DI GCAATG 1 cut(s) 81
Bse8I GATNNNNATC 1 cut(s) 1056
BseBI CCWGG 6 cut(s) 194, 285, 456, 819, 923, 978
BseDI CCNNGG 7 cut(s) 382, 435, 745, 817, 916, 976, 977
BseGI GGATG 4 cut(s) 320, 653, 862, 905
BseJI GATNNNNATC 1 cut(s) 1056
BseLI CCNNNNNNNGG 1 cut(s) 922
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 1 cut(s) 1118
BseNI ACTGG 5 cut(s) 485, 538, 546, 899, 973
BseRI GAGGAG 1 cut(s) 43
BseSI GKGCMC 1 cut(s) 541
BseXI GCAGC 5 cut(s) 358, 454, 925, 1082, 1085
BsgI GTGCAG 1 cut(s) 44
Bsh1236I CGCG 2 cut(s) 437, 599
BshFI GGCC 3 cut(s) 726, 921, 1086
BsiHKAI GWGCWC 1 cut(s) 478
BsiSI CCGG 3 cut(s) 684, 745, 891
BslFI GGGAC 4 cut(s) 65, 65, 762, 1024
BslI CCNNNNNNNGG 1 cut(s) 922
BsmAI GTCTC 1 cut(s) 115
BsmFI GGGAC 4 cut(s) 65, 65, 762, 1024
BsmI GAATGC 1 cut(s) 238
BsnI GGCC 3 cut(s) 726, 921, 1086
Bsp1286I GDGCHC 2 cut(s) 478, 541
Bsp143I GATC 5 cut(s) 293, 712, 741, 1027, 1036
Bsp19I CCATGG 2 cut(s) 382, 916
BspACI CCGC 6 cut(s) 48, 435, 437, 599, 1025, 1068
BspANI GGCC 3 cut(s) 726, 921, 1086
BspCNI CTCAG 1 cut(s) 1117
BspFNI CGCG 2 cut(s) 437, 599
BspLI GGNNCC 4 cut(s) 81, 575, 725, 1029
BspMAI CTGCAG 4 cut(s) 99, 359, 409, 954
BspMI ACCTGC 2 cut(s) 412, 701
BspPI GGATC 3 cut(s) 736, 1022, 1035
BsrDI GCAATG 1 cut(s) 81
BsrFI RCCGGY 1 cut(s) 683
BsrI ACTGG 5 cut(s) 485, 538, 546, 899, 973
BssAI RCCGGY 1 cut(s) 683
BssECI CCNNGG 7 cut(s) 382, 435, 745, 817, 916, 976, 977
BssMI GATC 5 cut(s) 293, 712, 741, 1027, 1036
BssSI CACGAG 2 cut(s) 210, 990
BssT1I CCWWGG 2 cut(s) 382, 916
Bst2BI CACGAG 2 cut(s) 210, 990
Bst2UI CCWGG 6 cut(s) 194, 285, 456, 819, 923, 978
Bst4CI ACNGT 3 cut(s) 45, 619, 737
BstC8I GCNNGC 2 cut(s) 99, 409
BstDEI CTNAG 2 cut(s) 397, 1104
BstDSI CCRYGG 3 cut(s) 382, 435, 916
BstEII GGTNACC 1 cut(s) 1063
BstF5I GGATG 4 cut(s) 320, 653, 862, 905
BstFNI CGCG 2 cut(s) 437, 599
BstH2I RGCGCY 1 cut(s) 414
BstHHI GCGC 2 cut(s) 158, 413
BstKTI GATC 5 cut(s) 296, 715, 744, 1030, 1039
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 5 cut(s) 293, 712, 741, 1027, 1036
BstMWI GCNNNNNNNGC 3 cut(s) 98, 317, 473
BstNI CCWGG 6 cut(s) 194, 285, 456, 819, 923, 978
BstPI GGTNACC 1 cut(s) 1063
BstSCI CCNGG 8 cut(s) 192, 283, 454, 744, 817, 890, 921, 976
BstSFI CTRYAG 5 cut(s) 95, 355, 405, 733, 950
BstSLI GKGCMC 1 cut(s) 541
BstUI CGCG 2 cut(s) 437, 599
BstV1I GCAGC 5 cut(s) 358, 454, 925, 1082, 1085
BstX2I RGATCY 2 cut(s) 741, 1027
BstYI RGATCY 2 cut(s) 741, 1027
BsuI GTATCC 1 cut(s) 965
BsuRI GGCC 3 cut(s) 726, 921, 1086
BtgI CCRYGG 3 cut(s) 382, 435, 916
BtsCI GGATG 4 cut(s) 320, 653, 862, 905
BtsI GCAGTG 2 cut(s) 92, 159
BtsIMutI CAGTG 9 cut(s) 92, 159, 186, 227, 478, 510, 539, 742, 1047
BveI ACCTGC 2 cut(s) 412, 701
Cac8I GCNNGC 2 cut(s) 99, 409
CaiI CAGNNNCTG 1 cut(s) 413
CfoI GCGC 2 cut(s) 158, 413
Cfr10I RCCGGY 1 cut(s) 683
Cfr13I GGNCC 3 cut(s) 79, 574, 724
Cfr42I CCGCGG 1 cut(s) 438
CseI GACGC 1 cut(s) 812
Csp6I GTAC 3 cut(s) 812, 866, 966
CviAII CATG 5 cut(s) 58, 383, 653, 917, 1082
CviQI GTAC 3 cut(s) 812, 866, 966
DdeI CTNAG 2 cut(s) 397, 1104
DpnI GATC 5 cut(s) 295, 714, 743, 1029, 1038
DpnII GATC 5 cut(s) 293, 712, 741, 1027, 1036
EaeI YGGCCR 1 cut(s) 1084
Eco130I CCWWGG 2 cut(s) 382, 916
Eco32I GATATC 1 cut(s) 151
Eco47I GGWCC 2 cut(s) 79, 574
Eco57I CTGAAG 1 cut(s) 546
Eco91I GGTNACC 1 cut(s) 1063
EcoO109I RGGNCCY 1 cut(s) 574
EcoO65I GGTNACC 1 cut(s) 1063
EcoRII CCWGG 6 cut(s) 192, 283, 454, 817, 921, 976
EcoRV GATATC 1 cut(s) 151
EcoT14I CCWWGG 2 cut(s) 382, 916
ErhI CCWWGG 2 cut(s) 382, 916
FaeI CATG 5 cut(s) 61, 386, 656, 920, 1085
FaqI GGGAC 4 cut(s) 65, 65, 762, 1024
FatI CATG 5 cut(s) 57, 382, 652, 916, 1081
FauI CCCGC 1 cut(s) 41
Fnu4HI GCNGC 5 cut(s) 372, 468, 939, 1071, 1074
FokI GGATG 4 cut(s) 307, 660, 869, 892
Fsp4HI GCNGC 5 cut(s) 372, 468, 939, 1071, 1074
FspBI CTAG 4 cut(s) 275, 644, 869, 1141
GlaI GCGC 2 cut(s) 157, 412
GluI GCNGC 5 cut(s) 372, 468, 939, 1071, 1074
GsuI CTGGAG 2 cut(s) 816, 840
HaeII RGCGCY 1 cut(s) 414
HaeIII GGCC 3 cut(s) 726, 921, 1086
HapII CCGG 3 cut(s) 684, 745, 891
HgaI GACGC 1 cut(s) 812
HhaI GCGC 2 cut(s) 158, 413
Hin1II CATG 5 cut(s) 61, 386, 656, 920, 1085
Hin6I GCGC 2 cut(s) 156, 411
HinP1I GCGC 2 cut(s) 156, 411
HinfI GANTC 5 cut(s) 7, 108, 182, 206, 779
HpaII CCGG 3 cut(s) 684, 745, 891
HphI GGTGA 2 cut(s) 158, 698
Hpy166II GTNNAC 1 cut(s) 186
Hpy188I TCNGA 4 cut(s) 12, 352, 565, 630
Hpy188III TCNNGA 5 cut(s) 136, 299, 716, 833, 1005
Hpy8I GTNNAC 1 cut(s) 186
HpyAV CCTTC 3 cut(s) 310, 564, 713
HpyCH4III ACNGT 3 cut(s) 45, 619, 737
HpyCH4IV ACGT 1 cut(s) 1013
HpyCH4V TGCA 9 cut(s) 25, 97, 122, 236, 357, 407, 432, 905, 952
HpyF10VI GCNNNNNNNGC 3 cut(s) 98, 317, 473
HpyF3I CTNAG 2 cut(s) 397, 1104
HpySE526I ACGT 1 cut(s) 1013
Hsp92II CATG 5 cut(s) 61, 386, 656, 920, 1085
HspAI GCGC 2 cut(s) 156, 411
KspI CCGCGG 1 cut(s) 438
Kzo9I GATC 5 cut(s) 293, 712, 741, 1027, 1036
LmnI GCTCC 1 cut(s) 835
Lsp1109I GCAGC 5 cut(s) 358, 454, 925, 1082, 1085
LweI GCATC 5 cut(s) 109, 329, 638, 778, 914
MaeI CTAG 4 cut(s) 275, 644, 869, 1141
MaeII ACGT 1 cut(s) 1013
MaeIII GTNAC 5 cut(s) 39, 215, 613, 1045, 1063
MalI GATC 5 cut(s) 295, 714, 743, 1029, 1038
MboI GATC 5 cut(s) 293, 712, 741, 1027, 1036
MboII GAAGA 4 cut(s) 74, 614, 688, 970
MfeI CAATTG 1 cut(s) 366
MflI RGATCY 2 cut(s) 741, 1027
MhlI GDGCHC 2 cut(s) 478, 541
MlsI TGGCCA 1 cut(s) 1086
MluNI TGGCCA 1 cut(s) 1086
MlyI GAGTC 2 cut(s) 117, 191
Mox20I TGGCCA 1 cut(s) 1086
MroXI GAANNNNTTC 1 cut(s) 346
MscI TGGCCA 1 cut(s) 1086
MseI TTAA 4 cut(s) 417, 527, 764, 984
MslI CAYNNNNRTG 1 cut(s) 657
Msp20I TGGCCA 1 cut(s) 1086
MspA1I CMGCKG 2 cut(s) 437, 770
MspI CCGG 3 cut(s) 684, 745, 891
MspR9I CCNGG 8 cut(s) 194, 285, 456, 746, 819, 892, 923, 978
MunI CAATTG 1 cut(s) 366
Mva1269I GAATGC 1 cut(s) 238
MvaI CCWGG 6 cut(s) 194, 285, 456, 819, 923, 978
MvnI CGCG 2 cut(s) 437, 599
MwoI GCNNNNNNNGC 3 cut(s) 98, 317, 473
NciI CCSGG 2 cut(s) 746, 892
NcoI CCATGG 2 cut(s) 382, 916
NdeII GATC 5 cut(s) 293, 712, 741, 1027, 1036
NlaIII CATG 5 cut(s) 61, 386, 656, 920, 1085
NlaIV GGNNCC 4 cut(s) 81, 575, 725, 1029
NmuCI GTSAC 2 cut(s) 215, 1045
PaqCI CACCTGC 1 cut(s) 412
PasI CCCWGGG 1 cut(s) 977
PctI GAATGC 1 cut(s) 238
PdmI GAANNNNTTC 1 cut(s) 346
PfeI GAWTC 3 cut(s) 7, 206, 779
PflMI CCANNNNNTGG 1 cut(s) 922
PkrI GCNGC 5 cut(s) 373, 469, 940, 1072, 1075
PleI GAGTC 2 cut(s) 116, 190
PpsI GAGTC 2 cut(s) 116, 190
PpuMI RGGWCCY 1 cut(s) 574
Psp5II RGGWCCY 1 cut(s) 574
Psp6I CCWGG 6 cut(s) 192, 283, 454, 817, 921, 976
PspEI GGTNACC 1 cut(s) 1063
PspGI CCWGG 6 cut(s) 192, 283, 454, 817, 921, 976
PspN4I GGNNCC 4 cut(s) 81, 575, 725, 1029
PspPI GGNCC 3 cut(s) 79, 574, 724
PspPPI RGGWCCY 1 cut(s) 574
PstI CTGCAG 4 cut(s) 99, 359, 409, 954
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 2 cut(s) 741, 1027
PvuII CAGCTG 1 cut(s) 770
RsaI GTAC 3 cut(s) 813, 867, 967
RsaNI GTAC 3 cut(s) 812, 866, 966
RseI CAYNNNNRTG 1 cut(s) 657
SacII CCGCGG 1 cut(s) 438
SaqAI TTAA 4 cut(s) 417, 527, 764, 984
SatI GCNGC 5 cut(s) 372, 468, 939, 1071, 1074
Sau3AI GATC 5 cut(s) 293, 712, 741, 1027, 1036
Sau96I GGNCC 3 cut(s) 79, 574, 724
SbfI CCTGCAGG 1 cut(s) 409
SchI GAGTC 2 cut(s) 117, 191
ScrFI CCNGG 8 cut(s) 194, 285, 456, 746, 819, 892, 923, 978
SdaI CCTGCAGG 1 cut(s) 409
SduI GDGCHC 2 cut(s) 478, 541
SfaNI GCATC 5 cut(s) 109, 329, 638, 778, 914
SfcI CTRYAG 5 cut(s) 95, 355, 405, 733, 950
Sfr303I CCGCGG 1 cut(s) 438
SgrBI CCGCGG 1 cut(s) 438
SinI GGWCC 2 cut(s) 79, 574
SmiMI CAYNNNNRTG 1 cut(s) 657
SmlI CTYRAG 1 cut(s) 793
SmoI CTYRAG 1 cut(s) 793
SpeI ACTAGT 1 cut(s) 868
Sse8387I CCTGCAGG 1 cut(s) 409
SsiI CCGC 6 cut(s) 48, 435, 437, 599, 1025, 1068
SspMI CTAG 4 cut(s) 275, 644, 869, 1141
StyD4I CCNGG 8 cut(s) 192, 283, 454, 744, 817, 890, 921, 976
StyI CCWWGG 2 cut(s) 382, 916
TaaI ACNGT 3 cut(s) 45, 619, 737
TaiI ACGT 1 cut(s) 1016
TaqI TCGA 2 cut(s) 252, 1129
TatI WGTACW 3 cut(s) 811, 865, 965
TfiI GAWTC 3 cut(s) 7, 206, 779
Tru1I TTAA 4 cut(s) 417, 527, 764, 984
Tru9I TTAA 4 cut(s) 417, 527, 764, 984
TscAI CASTG 9 cut(s) 99, 166, 193, 234, 485, 510, 546, 742, 1054
TseFI GTSAC 2 cut(s) 215, 1045
TseI GCWGC 5 cut(s) 371, 467, 938, 1070, 1073
Tsp45I GTSAC 2 cut(s) 215, 1045
TspDTI ATGAA 2 cut(s) 329, 464
TspGWI ACGGA 2 cut(s) 313, 698
TspRI CASTG 9 cut(s) 99, 166, 193, 234, 485, 510, 546, 742, 1054
Van91I CCANNNNNTGG 1 cut(s) 922
VpaK11BI GGWCC 2 cut(s) 79, 574
XapI RAATTY 2 cut(s) 344, 927
XmnI GAANNNNTTC 1 cut(s) 346
XspI CTAG 4 cut(s) 275, 644, 869, 1141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.