Prupe.3G012800_v2.0.a1

protein DJ-1 homolog D-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
864067 .. 866407
2341 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G012800.1

Sequence Viewer

Length: 1188 bp
ATGGGGAATCCGAAAGGCGAGGTGCAGAGGAGGGTGTTGTTACTGTGCGGGGACTACATGGAAGATTACGAGGCAATGGTCCCATTTCAAGCACTGCAGGCATTTGGAGTCTCTGTTGATGCAGTTTCTCCTGTCAAGAAAGCTGGTGATATCTGCGCCACTGCCATAACCATTCAAGTAGAGTCCACTGACCAGGCTAATAACGAATCTCGTGGTCACAATTTCACACTGAATGCAACATTTGATGACATCGAAATTGACAAATATGATGGTCTAGTTATACCAGGAGGACGATCTCCTGAACATCTTGCTATGAAGGCATCCGTTGTAGAATTGGCGAGAAAATTTTCTGACTCCAGAAAGCCAATTGCTGCTATTTGCCATGGGCTGTTGGTCTTAGCACCTGCAGGCGCTGTTAAAGGTCGCAAATGCACCGCGGTTTCAACTATGAAACCTGGATTGGTTGCTGCTGGTGCTCACTGGGTAGAACCCGATACATTGTCAGTGTGTGTTGCTGATGATAATTTAATTACTGGGGTCACATATTATGGCAATCCTGAGTTCATTAGGCTTTTTCTCAAGGCACTAGGAGGCAACATATGTGCTTCAGAGAGAAGGGTCCTCATCATCATTGGAAACTACGCGGAAGATTATGAGGTAACTGTGCCTTATCAGACCCTCAAAGTTCTAGGATGCCATGTTGATGTGGTTTGCCCCAAGAAGAAAGCCGGTGATACCTGCCCAACTGCTATCCGTGATCTTGAAGGGGGCCAAACCTACAGTGAGATCCGGGGACATAATTTTGTTTTAACAGCTGACTTTGAATCCATAGATGCCTCAAGTTATGACGCTCTTGTACTCCCTGGAGGTAAAGCTCCAGAGTTTTTGGCACTAAAGGAGGATGTTATTGTACTAGTGAAACAATTTATGGAAGCCAGGAAACCAGTTGCATCCATCTGCCATGGCCTGGAAATTTTAGTTGCTGCTGGTGTTCTGCAGGGGAAGAAATGTACTGGATACCCAGGGATTAAGGCTCGTGTGGTTTCGTCAGGAGGGACGTTTGTGGAAGCGGATCCAATAGATCGTTGTGTCACTGATGGAAATCTGGTTACCGCAGCAGCGTGGCATGGCCAACCAGAGCTTATTTCTCAGTTGATGACATTGCTTGATATTCGAGTATCATTCTAG

Protein Analysis

396

Amino Acids

42.32

Weight (kDa)

5.46

Isoelectric Point (pI)

35.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 412
Acc36I ACCTGC 2 cut(s) 412, 746
AccB7I CCANNNNNTGG 1 cut(s) 967
AccII CGCG 2 cut(s) 437, 644
AciI CCGC 6 cut(s) 48, 435, 437, 644, 1070, 1113
AclWI GGATC 3 cut(s) 781, 1067, 1080
AcoI YGGCCR 1 cut(s) 1129
AcsI RAATTY 2 cut(s) 344, 972
AcuI CTGAAG 1 cut(s) 591
AfaI GTAC 3 cut(s) 858, 912, 1012
AfiI CCNNNNNNNGG 1 cut(s) 967
AgsI TTSAA 5 cut(s) 89, 176, 444, 764, 824
AhlI ACTAGT 1 cut(s) 913
AjnI CCWGG 7 cut(s) 192, 283, 454, 862, 935, 966, 1021
AjuI GAANNNNNNNTTGG 2 cut(s) 443, 475
AluBI AGCT 4 cut(s) 143, 815, 875, 1141
AluI AGCT 4 cut(s) 143, 815, 875, 1141
Alw21I GWGCWC 1 cut(s) 478
Alw26I GTCTC 1 cut(s) 115
AlwI GGATC 3 cut(s) 781, 1067, 1080
AlwNI CAGNNNCTG 1 cut(s) 413
AoxI GGCC 3 cut(s) 769, 964, 1129
ApeKI GCWGC 5 cut(s) 371, 467, 983, 1115, 1118
ApoI RAATTY 2 cut(s) 344, 972
Asp700I GAANNNNTTC 1 cut(s) 346
AspLEI GCGC 2 cut(s) 158, 413
AspS9I GGNCC 3 cut(s) 79, 619, 769
AsuC2I CCSGG 1 cut(s) 791
AsuHPI GGTGA 2 cut(s) 158, 743
AvaII GGWCC 2 cut(s) 79, 619
BalI TGGCCA 1 cut(s) 1131
BamHI GGATCC 1 cut(s) 1072
BauI CACGAG 2 cut(s) 210, 1035
Bbv12I GWGCWC 1 cut(s) 478
BbvI GCAGC 5 cut(s) 358, 454, 970, 1127, 1130
BccI CCATC 3 cut(s) 263, 962, 1091
BciT130I CCWGG 7 cut(s) 194, 285, 456, 864, 937, 968, 1023
BciVI GTATCC 1 cut(s) 1010
BcnI CCSGG 1 cut(s) 791
BcoDI GTCTC 1 cut(s) 115
BcuI ACTAGT 1 cut(s) 913
BfaI CTAG 5 cut(s) 275, 587, 689, 914, 1186
BfmI CTRYAG 4 cut(s) 95, 405, 778, 995
BfoI RGCGCY 1 cut(s) 414
BfuAI ACCTGC 2 cut(s) 412, 746
BfuI GTATCC 1 cut(s) 1010
BisI GCNGC 5 cut(s) 372, 468, 984, 1116, 1119
BlsI GCNGC 5 cut(s) 373, 469, 985, 1117, 1120
Bme1390I CCNGG 8 cut(s) 194, 285, 456, 791, 864, 937, 968, 1023
Bme18I GGWCC 2 cut(s) 79, 619
BmgT120I GGNCC 3 cut(s) 79, 619, 769
BmiI GGNNCC 4 cut(s) 81, 620, 770, 1074
BmrFI CCNGG 8 cut(s) 194, 285, 456, 791, 864, 937, 968, 1023
BmrI ACTGGG 2 cut(s) 490, 543
BmsI GCATC 5 cut(s) 109, 329, 683, 823, 959
BmuI ACTGGG 2 cut(s) 490, 543
BpmI CTGGAG 3 cut(s) 340, 861, 885
BpuEI CTTGAG 2 cut(s) 563, 823
BpuMI CCSGG 1 cut(s) 791
BsaBI GATNNNNATC 1 cut(s) 1101
BsaJI CCNNGG 7 cut(s) 382, 435, 790, 862, 961, 1021, 1022
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 1 cut(s) 967
Bse118I RCCGGY 1 cut(s) 728
Bse1I ACTGG 4 cut(s) 485, 538, 944, 1018
Bse3DI GCAATG 2 cut(s) 81, 1160
Bse8I GATNNNNATC 1 cut(s) 1101
BseBI CCWGG 7 cut(s) 194, 285, 456, 864, 937, 968, 1023
BseDI CCNNGG 7 cut(s) 382, 435, 790, 862, 961, 1021, 1022
BseGI GGATG 4 cut(s) 320, 698, 907, 950
BseJI GATNNNNATC 1 cut(s) 1101
BseLI CCNNNNNNNGG 1 cut(s) 967
BseMI GCAATG 2 cut(s) 81, 1160
BseMII CTCAG 2 cut(s) 549, 1163
BseNI ACTGG 4 cut(s) 485, 538, 944, 1018
BseRI GAGGAG 1 cut(s) 43
BseXI GCAGC 5 cut(s) 358, 454, 970, 1127, 1130
BsgI GTGCAG 1 cut(s) 44
Bsh1236I CGCG 2 cut(s) 437, 644
BshFI GGCC 3 cut(s) 771, 966, 1131
BsiHKAI GWGCWC 1 cut(s) 478
BsiSI CCGG 2 cut(s) 729, 790
BslFI GGGAC 4 cut(s) 65, 65, 807, 1069
BslI CCNNNNNNNGG 1 cut(s) 967
BsmAI GTCTC 1 cut(s) 115
BsmFI GGGAC 4 cut(s) 65, 65, 807, 1069
BsmI GAATGC 1 cut(s) 238
BsnI GGCC 3 cut(s) 771, 966, 1131
Bsp1286I GDGCHC 1 cut(s) 478
Bsp143I GATC 5 cut(s) 293, 757, 786, 1072, 1081
Bsp19I CCATGG 2 cut(s) 382, 961
BspACI CCGC 6 cut(s) 48, 435, 437, 644, 1070, 1113
BspANI GGCC 3 cut(s) 771, 966, 1131
BspCNI CTCAG 2 cut(s) 550, 1162
BspFNI CGCG 2 cut(s) 437, 644
BspLI GGNNCC 4 cut(s) 81, 620, 770, 1074
BspMAI CTGCAG 3 cut(s) 99, 409, 999
BspMI ACCTGC 2 cut(s) 412, 746
BspPI GGATC 3 cut(s) 781, 1067, 1080
BsrDI GCAATG 2 cut(s) 81, 1160
BsrFI RCCGGY 1 cut(s) 728
BsrI ACTGG 4 cut(s) 485, 538, 944, 1018
BssAI RCCGGY 1 cut(s) 728
BssECI CCNNGG 7 cut(s) 382, 435, 790, 862, 961, 1021, 1022
BssMI GATC 5 cut(s) 293, 757, 786, 1072, 1081
BssSI CACGAG 2 cut(s) 210, 1035
BssT1I CCWWGG 2 cut(s) 382, 961
Bst2BI CACGAG 2 cut(s) 210, 1035
Bst2UI CCWGG 7 cut(s) 194, 285, 456, 864, 937, 968, 1023
Bst4CI ACNGT 3 cut(s) 45, 664, 782
BstC8I GCNNGC 2 cut(s) 99, 409
BstDEI CTNAG 3 cut(s) 397, 558, 1149
BstDSI CCRYGG 3 cut(s) 382, 435, 961
BstEII GGTNACC 1 cut(s) 1108
BstF5I GGATG 4 cut(s) 320, 698, 907, 950
BstFNI CGCG 2 cut(s) 437, 644
BstH2I RGCGCY 1 cut(s) 414
BstHHI GCGC 2 cut(s) 158, 413
BstKTI GATC 5 cut(s) 296, 760, 789, 1075, 1084
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 5 cut(s) 293, 757, 786, 1072, 1081
BstMWI GCNNNNNNNGC 3 cut(s) 98, 317, 473
BstNI CCWGG 7 cut(s) 194, 285, 456, 864, 937, 968, 1023
BstPI GGTNACC 1 cut(s) 1108
BstSCI CCNGG 8 cut(s) 192, 283, 454, 789, 862, 935, 966, 1021
BstSFI CTRYAG 4 cut(s) 95, 405, 778, 995
BstUI CGCG 2 cut(s) 437, 644
BstV1I GCAGC 5 cut(s) 358, 454, 970, 1127, 1130
BstX2I RGATCY 2 cut(s) 786, 1072
BstYI RGATCY 2 cut(s) 786, 1072
BsuI GTATCC 1 cut(s) 1010
BsuRI GGCC 3 cut(s) 771, 966, 1131
BtgI CCRYGG 3 cut(s) 382, 435, 961
BtsCI GGATG 4 cut(s) 320, 698, 907, 950
BtsI GCAGTG 2 cut(s) 92, 159
BtsIMutI CAGTG 8 cut(s) 92, 159, 186, 227, 478, 510, 787, 1092
BveI ACCTGC 2 cut(s) 412, 746
Cac8I GCNNGC 2 cut(s) 99, 409
CaiI CAGNNNCTG 1 cut(s) 413
CfoI GCGC 2 cut(s) 158, 413
Cfr10I RCCGGY 1 cut(s) 728
Cfr13I GGNCC 3 cut(s) 79, 619, 769
Cfr42I CCGCGG 1 cut(s) 438
CseI GACGC 1 cut(s) 857
Csp6I GTAC 3 cut(s) 857, 911, 1011
CviAII CATG 5 cut(s) 58, 383, 698, 962, 1127
CviQI GTAC 3 cut(s) 857, 911, 1011
DdeI CTNAG 3 cut(s) 397, 558, 1149
DpnI GATC 5 cut(s) 295, 759, 788, 1074, 1083
DpnII GATC 5 cut(s) 293, 757, 786, 1072, 1081
EaeI YGGCCR 1 cut(s) 1129
Eco130I CCWWGG 2 cut(s) 382, 961
Eco32I GATATC 1 cut(s) 151
Eco47I GGWCC 2 cut(s) 79, 619
Eco57I CTGAAG 1 cut(s) 591
Eco91I GGTNACC 1 cut(s) 1108
EcoO109I RGGNCCY 1 cut(s) 619
EcoO65I GGTNACC 1 cut(s) 1108
EcoRII CCWGG 7 cut(s) 192, 283, 454, 862, 935, 966, 1021
EcoRV GATATC 1 cut(s) 151
EcoT14I CCWWGG 2 cut(s) 382, 961
ErhI CCWWGG 2 cut(s) 382, 961
FaeI CATG 5 cut(s) 61, 386, 701, 965, 1130
FaqI GGGAC 4 cut(s) 65, 65, 807, 1069
FatI CATG 5 cut(s) 57, 382, 697, 961, 1126
FauI CCCGC 1 cut(s) 41
FauNDI CATATG 1 cut(s) 599
Fnu4HI GCNGC 5 cut(s) 372, 468, 984, 1116, 1119
FokI GGATG 4 cut(s) 307, 705, 914, 937
Fsp4HI GCNGC 5 cut(s) 372, 468, 984, 1116, 1119
FspBI CTAG 5 cut(s) 275, 587, 689, 914, 1186
GlaI GCGC 2 cut(s) 157, 412
GluI GCNGC 5 cut(s) 372, 468, 984, 1116, 1119
GsuI CTGGAG 3 cut(s) 340, 861, 885
HaeII RGCGCY 1 cut(s) 414
HaeIII GGCC 3 cut(s) 771, 966, 1131
HapII CCGG 2 cut(s) 729, 790
HgaI GACGC 1 cut(s) 857
HhaI GCGC 2 cut(s) 158, 413
Hin1II CATG 5 cut(s) 61, 386, 701, 965, 1130
Hin6I GCGC 2 cut(s) 156, 411
HinP1I GCGC 2 cut(s) 156, 411
HinfI GANTC 6 cut(s) 7, 108, 182, 206, 353, 824
HpaII CCGG 2 cut(s) 729, 790
HphI GGTGA 2 cut(s) 158, 743
Hpy166II GTNNAC 1 cut(s) 186
Hpy188I TCNGA 4 cut(s) 12, 352, 610, 675
Hpy188III TCNNGA 7 cut(s) 136, 299, 357, 557, 761, 878, 1050
Hpy8I GTNNAC 1 cut(s) 186
HpyAV CCTTC 3 cut(s) 310, 609, 758
HpyCH4III ACNGT 3 cut(s) 45, 664, 782
HpyCH4IV ACGT 1 cut(s) 1058
HpyCH4V TGCA 8 cut(s) 25, 97, 122, 236, 407, 432, 950, 997
HpyF10VI GCNNNNNNNGC 3 cut(s) 98, 317, 473
HpyF3I CTNAG 3 cut(s) 397, 558, 1149
HpySE526I ACGT 1 cut(s) 1058
Hsp92II CATG 5 cut(s) 61, 386, 701, 965, 1130
HspAI GCGC 2 cut(s) 156, 411
KspI CCGCGG 1 cut(s) 438
Kzo9I GATC 5 cut(s) 293, 757, 786, 1072, 1081
LmnI GCTCC 1 cut(s) 880
Lsp1109I GCAGC 5 cut(s) 358, 454, 970, 1127, 1130
LweI GCATC 5 cut(s) 109, 329, 683, 823, 959
MaeI CTAG 5 cut(s) 275, 587, 689, 914, 1186
MaeII ACGT 1 cut(s) 1058
MaeIII GTNAC 6 cut(s) 39, 215, 538, 658, 1090, 1108
MalI GATC 5 cut(s) 295, 759, 788, 1074, 1083
MboI GATC 5 cut(s) 293, 757, 786, 1072, 1081
MboII GAAGA 4 cut(s) 74, 659, 733, 1015
MfeI CAATTG 1 cut(s) 366
MflI RGATCY 2 cut(s) 786, 1072
MhlI GDGCHC 1 cut(s) 478
MlsI TGGCCA 1 cut(s) 1131
MluNI TGGCCA 1 cut(s) 1131
MlyI GAGTC 3 cut(s) 117, 191, 347
Mox20I TGGCCA 1 cut(s) 1131
MroXI GAANNNNTTC 1 cut(s) 346
MscI TGGCCA 1 cut(s) 1131
MseI TTAA 4 cut(s) 417, 527, 809, 1029
MslI CAYNNNNRTG 1 cut(s) 702
Msp20I TGGCCA 1 cut(s) 1131
MspA1I CMGCKG 2 cut(s) 437, 815
MspI CCGG 2 cut(s) 729, 790
MspR9I CCNGG 8 cut(s) 194, 285, 456, 791, 864, 937, 968, 1023
MunI CAATTG 1 cut(s) 366
Mva1269I GAATGC 1 cut(s) 238
MvaI CCWGG 7 cut(s) 194, 285, 456, 864, 937, 968, 1023
MvnI CGCG 2 cut(s) 437, 644
MwoI GCNNNNNNNGC 3 cut(s) 98, 317, 473
NciI CCSGG 1 cut(s) 791
NcoI CCATGG 2 cut(s) 382, 961
NdeI CATATG 1 cut(s) 599
NdeII GATC 5 cut(s) 293, 757, 786, 1072, 1081
NlaIII CATG 5 cut(s) 61, 386, 701, 965, 1130
NlaIV GGNNCC 4 cut(s) 81, 620, 770, 1074
NmuCI GTSAC 3 cut(s) 215, 538, 1090
PaqCI CACCTGC 1 cut(s) 412
PasI CCCWGGG 1 cut(s) 1022
PctI GAATGC 1 cut(s) 238
PdmI GAANNNNTTC 1 cut(s) 346
PfeI GAWTC 3 cut(s) 7, 206, 824
PflMI CCANNNNNTGG 1 cut(s) 967
PkrI GCNGC 5 cut(s) 373, 469, 985, 1117, 1120
PleI GAGTC 3 cut(s) 116, 190, 347
PpsI GAGTC 3 cut(s) 116, 190, 347
PpuMI RGGWCCY 1 cut(s) 619
Psp5II RGGWCCY 1 cut(s) 619
Psp6I CCWGG 7 cut(s) 192, 283, 454, 862, 935, 966, 1021
PspEI GGTNACC 1 cut(s) 1108
PspGI CCWGG 7 cut(s) 192, 283, 454, 862, 935, 966, 1021
PspN4I GGNNCC 4 cut(s) 81, 620, 770, 1074
PspPI GGNCC 3 cut(s) 79, 619, 769
PspPPI RGGWCCY 1 cut(s) 619
PstI CTGCAG 3 cut(s) 99, 409, 999
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 2 cut(s) 786, 1072
PvuII CAGCTG 1 cut(s) 815
RsaI GTAC 3 cut(s) 858, 912, 1012
RsaNI GTAC 3 cut(s) 857, 911, 1011
RseI CAYNNNNRTG 1 cut(s) 702
SacII CCGCGG 1 cut(s) 438
SaqAI TTAA 4 cut(s) 417, 527, 809, 1029
SatI GCNGC 5 cut(s) 372, 468, 984, 1116, 1119
Sau3AI GATC 5 cut(s) 293, 757, 786, 1072, 1081
Sau96I GGNCC 3 cut(s) 79, 619, 769
SbfI CCTGCAGG 1 cut(s) 409
SchI GAGTC 3 cut(s) 117, 191, 347
ScrFI CCNGG 8 cut(s) 194, 285, 456, 791, 864, 937, 968, 1023
SdaI CCTGCAGG 1 cut(s) 409
SduI GDGCHC 1 cut(s) 478
SfaNI GCATC 5 cut(s) 109, 329, 683, 823, 959
SfcI CTRYAG 4 cut(s) 95, 405, 778, 995
Sfr303I CCGCGG 1 cut(s) 438
SgrBI CCGCGG 1 cut(s) 438
SinI GGWCC 2 cut(s) 79, 619
SmiMI CAYNNNNRTG 1 cut(s) 702
SmlI CTYRAG 2 cut(s) 578, 838
SmoI CTYRAG 2 cut(s) 578, 838
SpeI ACTAGT 1 cut(s) 913
Sse8387I CCTGCAGG 1 cut(s) 409
SsiI CCGC 6 cut(s) 48, 435, 437, 644, 1070, 1113
SspMI CTAG 5 cut(s) 275, 587, 689, 914, 1186
StyD4I CCNGG 8 cut(s) 192, 283, 454, 789, 862, 935, 966, 1021
StyI CCWWGG 2 cut(s) 382, 961
TaaI ACNGT 3 cut(s) 45, 664, 782
TaiI ACGT 1 cut(s) 1061
TaqI TCGA 2 cut(s) 252, 1174
TatI WGTACW 3 cut(s) 856, 910, 1010
TfiI GAWTC 3 cut(s) 7, 206, 824
Tru1I TTAA 4 cut(s) 417, 527, 809, 1029
Tru9I TTAA 4 cut(s) 417, 527, 809, 1029
TscAI CASTG 8 cut(s) 99, 166, 193, 234, 485, 510, 787, 1099
TseFI GTSAC 3 cut(s) 215, 538, 1090
TseI GCWGC 5 cut(s) 371, 467, 983, 1115, 1118
Tsp45I GTSAC 3 cut(s) 215, 538, 1090
TspDTI ATGAA 3 cut(s) 329, 464, 553
TspGWI ACGGA 2 cut(s) 313, 743
TspRI CASTG 8 cut(s) 99, 166, 193, 234, 485, 510, 787, 1099
Van91I CCANNNNNTGG 1 cut(s) 967
VpaK11BI GGWCC 2 cut(s) 79, 619
XapI RAATTY 2 cut(s) 344, 972
XmnI GAANNNNTTC 1 cut(s) 346
XspI CTAG 5 cut(s) 275, 587, 689, 914, 1186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.