Prupe.3G012900_v2.0.a1

protein DJ-1 homolog D-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
884686 .. 887237
2552 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G012900.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 1191 bp
ATGGGGAATCCAAAAGGCGAGGAGCGGAGGAGGAGGGTGTTGTTACTGTGCGGGGACTACATGGAAGATTACGAGGCAATGGTCCCATTTCAAGCACTGCAGGCATTTGGAGTCGCTGTTGATGCAGTTTCTCCTGGCAAGAAAGCTGGTGATATCTGCGCCACTGCCATAACCATTCAAGTAGAGACCACTGATGAGGCTAATAGCGAATCTCGTGGTCACAATTTCACACTGAATGCAACATTTGATGAGATTGAATTTGAGGAATATGATGGTCTAGTTATACCAGGAGGACGATCTCCTGAACATCTTGCTATGAATGCATCGGTTGTAGAATTGGTGAGAAAATTTTCCGACTCCAGAAAGCCAATTGCTGCTATTTGCCATGGGCAGTTGGTCTTAGCAGCTGCAGCCGCTGTTAAAGGTCGCAAGTGCACAGCGGTTTCAACTATGAAACCTGGATTGGTTGCTGCTGGTGCTCACTGGGTAGAACCCGATACATTGTCAGTGTGTGTTGCTGATGATAATTTAATTACTGGGGTCACATATTATGGCAATCCTGAGTTCATTGGGCTTTTTCTCAAGGCACTGGGAGGCAAAATATGTGCTTCAGAGAGAAGGGTCCTCATCATCATTGGAAACTACGCGGAAGATTATGAGGTAACTGTGCCTTATCAGACCCTCAAAGTTCTAGGATGCCATGTTGATGTGGTTTGCCCCAAGAAGAAAGCCGGTGATACCTGCCCAACTGCTATCCGTGATCTTGAAGGGGGCCAAACCTACAGTGAGATCCGGGGACATAATTTTGTTTTAACAGCTGACTTTGAATCCATAGATGCCTCAAGTTATGACGCTCTTGTACTCCCTGGAGGTAAAGCTCCAGAGTTTTTGGCACTAAAGGAGGATGTTATTGTACTAGTGAAAAAATTTATGGAAGCCAGGAAACCAGTTGCATCCATCTGCCATGGCCTGGAAATTTTAGTTGCTGCTGGTGTTCTGCAGGGGAAGAAATGTACTGGATACCCAGGGATTAAGGCTCGTGTGGTTTCGTCAGGGGGGACGTTTGTGGAAGCGGATCCAATAGATCGTTGTGTCACTGATGGAAATCTGGTTACCGCAGCAGCGTGGCATGGCCAACCAGAGCTTATTTCTCAGTTGATGACATTGCTTGATATTCGAGTATCATTCTAG

Protein Analysis

397

Amino Acids

42.45

Weight (kDa)

5.31

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 749
AccB7I CCANNNNNTGG 1 cut(s) 970
AccBSI CCGCTC 1 cut(s) 25
AccII CGCG 1 cut(s) 647
AciI CCGC 7 cut(s) 25, 51, 414, 440, 647, 1073, 1116
AclWI GGATC 3 cut(s) 784, 1070, 1083
AcoI YGGCCR 1 cut(s) 1132
AcsI RAATTY 4 cut(s) 257, 347, 926, 975
AcuI CTGAAG 1 cut(s) 594
AfaI GTAC 3 cut(s) 861, 915, 1015
AfiI CCNNNNNNNGG 1 cut(s) 970
AgsI TTSAA 6 cut(s) 92, 179, 257, 447, 767, 827
AhlI ACTAGT 1 cut(s) 916
AjnI CCWGG 7 cut(s) 133, 286, 457, 865, 938, 969, 1024
AjuI GAANNNNNNNTTGG 2 cut(s) 446, 478
AluBI AGCT 5 cut(s) 146, 407, 818, 878, 1144
AluI AGCT 5 cut(s) 146, 407, 818, 878, 1144
Alw21I GWGCWC 2 cut(s) 437, 481
Alw26I GTCTC 1 cut(s) 179
Alw44I GTGCAC 1 cut(s) 433
AlwI GGATC 3 cut(s) 784, 1070, 1083
AlwNI CAGNNNCTG 1 cut(s) 416
AoxI GGCC 3 cut(s) 772, 967, 1132
ApaLI GTGCAC 1 cut(s) 433
ApeKI GCWGC 8 cut(s) 374, 404, 407, 410, 470, 986, 1118, 1121
ApoI RAATTY 4 cut(s) 257, 347, 926, 975
Asp700I GAANNNNTTC 1 cut(s) 349
AspLEI GCGC 1 cut(s) 161
AspS9I GGNCC 3 cut(s) 82, 622, 772
AsuC2I CCSGG 1 cut(s) 794
AsuHPI GGTGA 3 cut(s) 161, 352, 746
AvaII GGWCC 2 cut(s) 82, 622
BaeGI GKGCMC 1 cut(s) 437
BalI TGGCCA 1 cut(s) 1134
BamHI GGATCC 1 cut(s) 1075
BauI CACGAG 2 cut(s) 213, 1038
Bbv12I GWGCWC 2 cut(s) 437, 481
BbvI GCAGC 8 cut(s) 361, 394, 416, 422, 457, 973, 1130, 1133
BccI CCATC 3 cut(s) 266, 965, 1094
BciT130I CCWGG 7 cut(s) 135, 288, 459, 867, 940, 971, 1026
BciVI GTATCC 1 cut(s) 1013
BcnI CCSGG 1 cut(s) 794
BcoDI GTCTC 1 cut(s) 179
BcuI ACTAGT 1 cut(s) 916
BfaI CTAG 4 cut(s) 278, 692, 917, 1189
BfmI CTRYAG 4 cut(s) 98, 408, 781, 998
BfuAI ACCTGC 1 cut(s) 749
BfuI GTATCC 1 cut(s) 1013
BisI GCNGC 9 cut(s) 375, 405, 408, 411, 414, 471, 987, 1119, 1122
BlsI GCNGC 9 cut(s) 376, 406, 409, 412, 415, 472, 988, 1120, 1123
Bme1390I CCNGG 8 cut(s) 135, 288, 459, 794, 867, 940, 971, 1026
Bme18I GGWCC 2 cut(s) 82, 622
BmgT120I GGNCC 3 cut(s) 82, 622, 772
BmiI GGNNCC 4 cut(s) 84, 623, 773, 1077
BmrFI CCNGG 8 cut(s) 135, 288, 459, 794, 867, 940, 971, 1026
BmrI ACTGGG 3 cut(s) 493, 546, 599
BmsI GCATC 5 cut(s) 112, 332, 686, 826, 962
BmuI ACTGGG 3 cut(s) 493, 546, 599
BpmI CTGGAG 3 cut(s) 343, 864, 888
BpuEI CTTGAG 2 cut(s) 566, 826
BpuMI CCSGG 1 cut(s) 794
BsaBI GATNNNNATC 1 cut(s) 1104
BsaI GGTCTC 1 cut(s) 179
BsaJI CCNNGG 6 cut(s) 385, 793, 865, 964, 1024, 1025
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsc4I CCNNNNNNNGG 1 cut(s) 970
Bse118I RCCGGY 1 cut(s) 731
Bse1I ACTGG 5 cut(s) 488, 541, 594, 947, 1021
Bse3DI GCAATG 2 cut(s) 84, 1163
Bse8I GATNNNNATC 1 cut(s) 1104
BseBI CCWGG 7 cut(s) 135, 288, 459, 867, 940, 971, 1026
BseDI CCNNGG 6 cut(s) 385, 793, 865, 964, 1024, 1025
BseGI GGATG 3 cut(s) 701, 910, 953
BseJI GATNNNNATC 1 cut(s) 1104
BseLI CCNNNNNNNGG 1 cut(s) 970
BseMI GCAATG 2 cut(s) 84, 1163
BseMII CTCAG 2 cut(s) 552, 1166
BseNI ACTGG 5 cut(s) 488, 541, 594, 947, 1021
BseRI GAGGAG 3 cut(s) 35, 43, 46
BseSI GKGCMC 1 cut(s) 437
BseXI GCAGC 8 cut(s) 361, 394, 416, 422, 457, 973, 1130, 1133
Bsh1236I CGCG 1 cut(s) 647
BshFI GGCC 3 cut(s) 774, 969, 1134
BsiHKAI GWGCWC 2 cut(s) 437, 481
BsiSI CCGG 2 cut(s) 732, 793
BslFI GGGAC 4 cut(s) 68, 68, 810, 1072
BslI CCNNNNNNNGG 1 cut(s) 970
BsmAI GTCTC 1 cut(s) 179
BsmFI GGGAC 4 cut(s) 68, 68, 810, 1072
BsmI GAATGC 2 cut(s) 241, 325
BsnI GGCC 3 cut(s) 774, 969, 1134
Bso31I GGTCTC 1 cut(s) 179
Bsp1286I GDGCHC 2 cut(s) 437, 481
Bsp143I GATC 5 cut(s) 296, 760, 789, 1075, 1084
Bsp19I CCATGG 2 cut(s) 385, 964
BspACI CCGC 7 cut(s) 25, 51, 414, 440, 647, 1073, 1116
BspANI GGCC 3 cut(s) 774, 969, 1134
BspCNI CTCAG 2 cut(s) 553, 1165
BspFNI CGCG 1 cut(s) 647
BspLI GGNNCC 4 cut(s) 84, 623, 773, 1077
BspMAI CTGCAG 3 cut(s) 102, 412, 1002
BspMI ACCTGC 1 cut(s) 749
BspPI GGATC 3 cut(s) 784, 1070, 1083
BspTNI GGTCTC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 25
BsrDI GCAATG 2 cut(s) 84, 1163
BsrFI RCCGGY 1 cut(s) 731
BsrI ACTGG 5 cut(s) 488, 541, 594, 947, 1021
BssAI RCCGGY 1 cut(s) 731
BssECI CCNNGG 6 cut(s) 385, 793, 865, 964, 1024, 1025
BssMI GATC 5 cut(s) 296, 760, 789, 1075, 1084
BssSI CACGAG 2 cut(s) 213, 1038
BssT1I CCWWGG 2 cut(s) 385, 964
Bst2BI CACGAG 2 cut(s) 213, 1038
Bst2UI CCWGG 7 cut(s) 135, 288, 459, 867, 940, 971, 1026
Bst4CI ACNGT 3 cut(s) 48, 667, 785
BstC8I GCNNGC 1 cut(s) 102
BstDEI CTNAG 3 cut(s) 400, 561, 1152
BstDSI CCRYGG 2 cut(s) 385, 964
BstEII GGTNACC 1 cut(s) 1111
BstF5I GGATG 3 cut(s) 701, 910, 953
BstFNI CGCG 1 cut(s) 647
BstHHI GCGC 1 cut(s) 161
BstKTI GATC 5 cut(s) 299, 763, 792, 1078, 1087
BstMAI GTCTC 1 cut(s) 179
BstMBI GATC 5 cut(s) 296, 760, 789, 1075, 1084
BstMWI GCNNNNNNNGC 6 cut(s) 101, 122, 320, 410, 413, 476
BstNI CCWGG 7 cut(s) 135, 288, 459, 867, 940, 971, 1026
BstPI GGTNACC 1 cut(s) 1111
BstSCI CCNGG 8 cut(s) 133, 286, 457, 792, 865, 938, 969, 1024
BstSFI CTRYAG 4 cut(s) 98, 408, 781, 998
BstSLI GKGCMC 1 cut(s) 437
BstUI CGCG 1 cut(s) 647
BstV1I GCAGC 8 cut(s) 361, 394, 416, 422, 457, 973, 1130, 1133
BstX2I RGATCY 2 cut(s) 789, 1075
BstYI RGATCY 2 cut(s) 789, 1075
BsuI GTATCC 1 cut(s) 1013
BsuRI GGCC 3 cut(s) 774, 969, 1134
BtgI CCRYGG 2 cut(s) 385, 964
BtsCI GGATG 3 cut(s) 701, 910, 953
BtsI GCAGTG 2 cut(s) 95, 162
BtsIMutI CAGTG 9 cut(s) 95, 162, 189, 230, 481, 513, 587, 790, 1095
BveI ACCTGC 1 cut(s) 749
Cac8I GCNNGC 1 cut(s) 102
CaiI CAGNNNCTG 1 cut(s) 416
CfoI GCGC 1 cut(s) 161
Cfr10I RCCGGY 1 cut(s) 731
Cfr13I GGNCC 3 cut(s) 82, 622, 772
CseI GACGC 1 cut(s) 860
Csp6I GTAC 3 cut(s) 860, 914, 1014
CviAII CATG 5 cut(s) 61, 386, 701, 965, 1130
CviQI GTAC 3 cut(s) 860, 914, 1014
DdeI CTNAG 3 cut(s) 400, 561, 1152
DpnI GATC 5 cut(s) 298, 762, 791, 1077, 1086
DpnII GATC 5 cut(s) 296, 760, 789, 1075, 1084
EaeI YGGCCR 1 cut(s) 1132
Eco130I CCWWGG 2 cut(s) 385, 964
Eco31I GGTCTC 1 cut(s) 179
Eco32I GATATC 1 cut(s) 154
Eco47I GGWCC 2 cut(s) 82, 622
Eco57I CTGAAG 1 cut(s) 594
Eco91I GGTNACC 1 cut(s) 1111
EcoO109I RGGNCCY 1 cut(s) 622
EcoO65I GGTNACC 1 cut(s) 1111
EcoRII CCWGG 7 cut(s) 133, 286, 457, 865, 938, 969, 1024
EcoRV GATATC 1 cut(s) 154
EcoT14I CCWWGG 2 cut(s) 385, 964
EcoT22I ATGCAT 1 cut(s) 325
ErhI CCWWGG 2 cut(s) 385, 964
FaeI CATG 5 cut(s) 64, 389, 704, 968, 1133
FaqI GGGAC 4 cut(s) 68, 68, 810, 1072
FatI CATG 5 cut(s) 60, 385, 700, 964, 1129
FauI CCCGC 1 cut(s) 44
Fnu4HI GCNGC 9 cut(s) 375, 405, 408, 411, 414, 471, 987, 1119, 1122
FokI GGATG 3 cut(s) 708, 917, 940
Fsp4HI GCNGC 9 cut(s) 375, 405, 408, 411, 414, 471, 987, 1119, 1122
FspBI CTAG 4 cut(s) 278, 692, 917, 1189
GlaI GCGC 1 cut(s) 160
GluI GCNGC 9 cut(s) 375, 405, 408, 411, 414, 471, 987, 1119, 1122
GsuI CTGGAG 3 cut(s) 343, 864, 888
HaeIII GGCC 3 cut(s) 774, 969, 1134
HapII CCGG 2 cut(s) 732, 793
HgaI GACGC 1 cut(s) 860
HhaI GCGC 1 cut(s) 161
Hin1II CATG 5 cut(s) 64, 389, 704, 968, 1133
Hin6I GCGC 1 cut(s) 159
HinP1I GCGC 1 cut(s) 159
HinfI GANTC 5 cut(s) 7, 111, 209, 356, 827
HpaII CCGG 2 cut(s) 732, 793
HphI GGTGA 3 cut(s) 161, 352, 746
Hpy166II GTNNAC 1 cut(s) 435
Hpy188I TCNGA 3 cut(s) 355, 613, 678
Hpy188III TCNNGA 5 cut(s) 302, 360, 560, 764, 881
Hpy8I GTNNAC 1 cut(s) 435
HpyAV CCTTC 2 cut(s) 612, 761
HpyCH4III ACNGT 3 cut(s) 48, 667, 785
HpyCH4IV ACGT 1 cut(s) 1061
HpyCH4V TGCA 8 cut(s) 100, 125, 239, 323, 410, 435, 953, 1000
HpyF10VI GCNNNNNNNGC 6 cut(s) 101, 122, 320, 410, 413, 476
HpyF3I CTNAG 3 cut(s) 400, 561, 1152
HpySE526I ACGT 1 cut(s) 1061
Hsp92II CATG 5 cut(s) 64, 389, 704, 968, 1133
HspAI GCGC 1 cut(s) 159
Kzo9I GATC 5 cut(s) 296, 760, 789, 1075, 1084
LmnI GCTCC 2 cut(s) 22, 883
Lsp1109I GCAGC 8 cut(s) 361, 394, 416, 422, 457, 973, 1130, 1133
LweI GCATC 5 cut(s) 112, 332, 686, 826, 962
MaeI CTAG 4 cut(s) 278, 692, 917, 1189
MaeII ACGT 1 cut(s) 1061
MaeIII GTNAC 6 cut(s) 42, 218, 541, 661, 1093, 1111
MalI GATC 5 cut(s) 298, 762, 791, 1077, 1086
MbiI CCGCTC 1 cut(s) 25
MboI GATC 5 cut(s) 296, 760, 789, 1075, 1084
MboII GAAGA 4 cut(s) 77, 662, 736, 1018
MfeI CAATTG 1 cut(s) 369
MflI RGATCY 2 cut(s) 789, 1075
MhlI GDGCHC 2 cut(s) 437, 481
MlsI TGGCCA 1 cut(s) 1134
MluNI TGGCCA 1 cut(s) 1134
MlyI GAGTC 2 cut(s) 120, 350
MmeI TCCRAC 1 cut(s) 378
Mox20I TGGCCA 1 cut(s) 1134
Mph1103I ATGCAT 1 cut(s) 325
MroXI GAANNNNTTC 1 cut(s) 349
MscI TGGCCA 1 cut(s) 1134
MseI TTAA 4 cut(s) 420, 530, 812, 1032
MslI CAYNNNNRTG 1 cut(s) 705
Msp20I TGGCCA 1 cut(s) 1134
MspA1I CMGCKG 4 cut(s) 407, 416, 440, 818
MspI CCGG 2 cut(s) 732, 793
MspR9I CCNGG 8 cut(s) 135, 288, 459, 794, 867, 940, 971, 1026
MunI CAATTG 1 cut(s) 369
Mva1269I GAATGC 2 cut(s) 241, 325
MvaI CCWGG 7 cut(s) 135, 288, 459, 867, 940, 971, 1026
MvnI CGCG 1 cut(s) 647
MwoI GCNNNNNNNGC 6 cut(s) 101, 122, 320, 410, 413, 476
NciI CCSGG 1 cut(s) 794
NcoI CCATGG 2 cut(s) 385, 964
NdeII GATC 5 cut(s) 296, 760, 789, 1075, 1084
NlaIII CATG 5 cut(s) 64, 389, 704, 968, 1133
NlaIV GGNNCC 4 cut(s) 84, 623, 773, 1077
NmuCI GTSAC 3 cut(s) 218, 541, 1093
NsiI ATGCAT 1 cut(s) 325
PasI CCCWGGG 1 cut(s) 1025
PctI GAATGC 2 cut(s) 241, 325
PdmI GAANNNNTTC 1 cut(s) 349
PfeI GAWTC 3 cut(s) 7, 209, 827
PflMI CCANNNNNTGG 1 cut(s) 970
PkrI GCNGC 9 cut(s) 376, 406, 409, 412, 415, 472, 988, 1120, 1123
PleI GAGTC 2 cut(s) 119, 350
PpsI GAGTC 2 cut(s) 119, 350
PpuMI RGGWCCY 1 cut(s) 622
Psp5II RGGWCCY 1 cut(s) 622
Psp6I CCWGG 7 cut(s) 133, 286, 457, 865, 938, 969, 1024
PspEI GGTNACC 1 cut(s) 1111
PspGI CCWGG 7 cut(s) 133, 286, 457, 865, 938, 969, 1024
PspN4I GGNNCC 4 cut(s) 84, 623, 773, 1077
PspPI GGNCC 3 cut(s) 82, 622, 772
PspPPI RGGWCCY 1 cut(s) 622
PstI CTGCAG 3 cut(s) 102, 412, 1002
PstNI CAGNNNCTG 1 cut(s) 416
PsuI RGATCY 2 cut(s) 789, 1075
PvuII CAGCTG 2 cut(s) 407, 818
RsaI GTAC 3 cut(s) 861, 915, 1015
RsaNI GTAC 3 cut(s) 860, 914, 1014
RseI CAYNNNNRTG 1 cut(s) 705
SaqAI TTAA 4 cut(s) 420, 530, 812, 1032
SatI GCNGC 9 cut(s) 375, 405, 408, 411, 414, 471, 987, 1119, 1122
Sau3AI GATC 5 cut(s) 296, 760, 789, 1075, 1084
Sau96I GGNCC 3 cut(s) 82, 622, 772
SchI GAGTC 2 cut(s) 120, 350
ScrFI CCNGG 8 cut(s) 135, 288, 459, 794, 867, 940, 971, 1026
SduI GDGCHC 2 cut(s) 437, 481
SfaNI GCATC 5 cut(s) 112, 332, 686, 826, 962
SfcI CTRYAG 4 cut(s) 98, 408, 781, 998
SinI GGWCC 2 cut(s) 82, 622
SmiMI CAYNNNNRTG 1 cut(s) 705
SmlI CTYRAG 2 cut(s) 581, 841
SmoI CTYRAG 2 cut(s) 581, 841
SpeI ACTAGT 1 cut(s) 916
SsiI CCGC 7 cut(s) 25, 51, 414, 440, 647, 1073, 1116
SspMI CTAG 4 cut(s) 278, 692, 917, 1189
StyD4I CCNGG 8 cut(s) 133, 286, 457, 792, 865, 938, 969, 1024
StyI CCWWGG 2 cut(s) 385, 964
TaaI ACNGT 3 cut(s) 48, 667, 785
TaiI ACGT 1 cut(s) 1064
TaqI TCGA 1 cut(s) 1177
TatI WGTACW 3 cut(s) 859, 913, 1013
TauI GCSGC 1 cut(s) 416
TfiI GAWTC 3 cut(s) 7, 209, 827
Tru1I TTAA 4 cut(s) 420, 530, 812, 1032
Tru9I TTAA 4 cut(s) 420, 530, 812, 1032
TscAI CASTG 9 cut(s) 102, 169, 196, 237, 488, 513, 594, 790, 1102
TseFI GTSAC 3 cut(s) 218, 541, 1093
TseI GCWGC 8 cut(s) 374, 404, 407, 410, 470, 986, 1118, 1121
Tsp45I GTSAC 3 cut(s) 218, 541, 1093
TspDTI ATGAA 3 cut(s) 332, 467, 556
TspGWI ACGGA 1 cut(s) 746
TspRI CASTG 9 cut(s) 102, 169, 196, 237, 488, 513, 594, 790, 1102
Van91I CCANNNNNTGG 1 cut(s) 970
VneI GTGCAC 1 cut(s) 433
VpaK11BI GGWCC 2 cut(s) 82, 622
XapI RAATTY 4 cut(s) 257, 347, 926, 975
XmnI GAANNNNTTC 1 cut(s) 349
XspI CTAG 4 cut(s) 278, 692, 917, 1189
Zsp2I ATGCAT 1 cut(s) 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.