Protein present in Fab1, YOTB, Vac1, and EEA1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G65920 AT1G65920 |
| malus_domestica | MD09G1279800.v1.1 |
| prunus_persica | Prupe.3G014600_v2.0.a1 Prupe.3G014600_v2.0.a1 Prupe.3G014600_v2.0.a1 |
| pyrus_communis | pycom09g18800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2022, 2723 |
| Acc36I | ACCTGC | 3 cut(s) | 440, 1876, 1992 |
| AccB1I | GGYRCC | 1 cut(s) | 2083 |
| AciI | CCGC | 7 cut(s) | 827, 1163, 1196, 1278, 2581, 2693, 2954 |
| AclWI | GGATC | 6 cut(s) | 1054, 1067, 1414, 1575, 1915, 2111 |
| AcoI | YGGCCR | 1 cut(s) | 2948 |
| AcsI | RAATTY | 8 cut(s) | 146, 500, 693, 814, 1459, 2440, 2574, 3210 |
| AdeI | CACNNNGTG | 1 cut(s) | 296 |
| AfaI | GTAC | 8 cut(s) | 45, 161, 426, 912, 1630, 1656, 2185, 2918 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 960, 1056, 1281, 1470, 2062, 2093, 2258, 2393, 2953 |
| AflII | CTTAAG | 1 cut(s) | 2744 |
| AflIII | ACRYGT | 2 cut(s) | 1097, 1516 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1182, 2461 |
| AhlI | ACTAGT | 2 cut(s) | 1039, 2525 |
| AjnI | CCWGG | 5 cut(s) | 214, 507, 1062, 1796, 3037 |
| AleI | CACNNNNGTG | 1 cut(s) | 1862 |
| Alw21I | GWGCWC | 1 cut(s) | 1105 |
| Alw26I | GTCTC | 6 cut(s) | 64, 1081, 1131, 1454, 1872, 2334 |
| AlwI | GGATC | 6 cut(s) | 1054, 1067, 1414, 1575, 1915, 2111 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2507, 2584 |
| AoxI | GGCC | 4 cut(s) | 1680, 2395, 2944, 2948 |
| ApeKI | GCWGC | 6 cut(s) | 26, 941, 1421, 1922, 2347, 2708 |
| ApoI | RAATTY | 8 cut(s) | 146, 500, 693, 814, 1459, 2440, 2574, 3210 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 697, 2574 |
| AspS9I | GGNCC | 4 cut(s) | 452, 511, 2395, 2673 |
| AsuC2I | CCSGG | 2 cut(s) | 376, 1282 |
| AsuHPI | GGTGA | 8 cut(s) | 17, 308, 809, 1078, 1097, 1163, 1502, 1844 |
| AvaII | GGWCC | 3 cut(s) | 452, 511, 2673 |
| BamHI | GGATCC | 1 cut(s) | 1059 |
| BanI | GGYRCC | 1 cut(s) | 2083 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1777, 1809, 2900, 2932 |
| BauI | CACGAG | 1 cut(s) | 1078 |
| BbsI | GAAGAC | 3 cut(s) | 1003, 1181, 2024 |
| Bbv12I | GWGCWC | 1 cut(s) | 1105 |
| BbvI | GCAGC | 6 cut(s) | 13, 928, 1408, 1934, 2359, 2720 |
| BccI | CCATC | 7 cut(s) | 393, 560, 983, 1248, 1298, 2385, 3132 |
| BceAI | ACGGC | 3 cut(s) | 1434, 1935, 2040 |
| BciT130I | CCWGG | 5 cut(s) | 216, 509, 1064, 1798, 3039 |
| BclI | TGATCA | 1 cut(s) | 7 |
| BcnI | CCSGG | 2 cut(s) | 376, 1282 |
| BcoDI | GTCTC | 6 cut(s) | 64, 1081, 1131, 1454, 1872, 2334 |
| BcuI | ACTAGT | 2 cut(s) | 1039, 2525 |
| BfaI | CTAG | 7 cut(s) | 390, 1001, 1040, 1179, 1779, 2354, 2526 |
| BfmI | CTRYAG | 6 cut(s) | 945, 1266, 1425, 2135, 2431, 2445 |
| BfrI | CTTAAG | 1 cut(s) | 2744 |
| BfuAI | ACCTGC | 3 cut(s) | 440, 1876, 1992 |
| BisI | GCNGC | 8 cut(s) | 27, 942, 1422, 1923, 2348, 2582, 2694, 2709 |
| BlsI | GCNGC | 8 cut(s) | 28, 943, 1423, 1924, 2349, 2583, 2695, 2710 |
| Bme1390I | CCNGG | 7 cut(s) | 216, 376, 509, 1064, 1282, 1798, 3039 |
| Bme18I | GGWCC | 3 cut(s) | 452, 511, 2673 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1182, 2461 |
| BmgT120I | GGNCC | 4 cut(s) | 452, 511, 2395, 2673 |
| BmiI | GGNNCC | 4 cut(s) | 1061, 2085, 2396, 2675 |
| BmrFI | CCNGG | 7 cut(s) | 216, 376, 509, 1064, 1282, 1798, 3039 |
| BmsI | GCATC | 9 cut(s) | 481, 694, 856, 1483, 1754, 2062, 2359, 2550, 3118 |
| BpiI | GAAGAC | 3 cut(s) | 1003, 1181, 2024 |
| BpmI | CTGGAG | 2 cut(s) | 2262, 3060 |
| BpuEI | CTTGAG | 3 cut(s) | 665, 1358, 2844 |
| BpuMI | CCSGG | 2 cut(s) | 376, 1282 |
| BsaAI | YACGTR | 1 cut(s) | 2700 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2964 |
| BsaI | GGTCTC | 1 cut(s) | 2334 |
| BsaJI | CCNNGG | 6 cut(s) | 507, 1355, 1683, 1797, 1917, 2332 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 217, 247, 254, 284 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 960, 1056, 1281, 1470, 2062, 2093, 2258, 2393, 2953 |
| Bse118I | RCCGGY | 1 cut(s) | 2946 |
| Bse1I | ACTGG | 2 cut(s) | 350, 1960 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2964 |
| BseBI | CCWGG | 5 cut(s) | 216, 509, 1064, 1798, 3039 |
| BseDI | CCNNGG | 6 cut(s) | 507, 1355, 1683, 1797, 1917, 2332 |
| BseGI | GGATG | 9 cut(s) | 385, 493, 913, 1027, 1259, 1982, 2077, 2560, 2965 |
| BseJI | GATNNNNATC | 1 cut(s) | 2964 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 960, 1056, 1281, 1470, 2062, 2093, 2258, 2393, 2953 |
| BseMII | CTCAG | 4 cut(s) | 657, 1465, 2576, 2583 |
| BseNI | ACTGG | 2 cut(s) | 350, 1960 |
| BseRI | GAGGAG | 3 cut(s) | 238, 700, 2352 |
| BseXI | GCAGC | 6 cut(s) | 13, 928, 1408, 1934, 2359, 2720 |
| BseYI | CCCAGC | 2 cut(s) | 975, 2985 |
| BsgI | GTGCAG | 2 cut(s) | 1671, 2550 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1447 |
| BshFI | GGCC | 4 cut(s) | 1682, 2397, 2946, 2950 |
| BshNI | GGYRCC | 1 cut(s) | 2083 |
| BsiEI | CGRYCG | 1 cut(s) | 1447 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1105 |
| BsiSI | CCGG | 3 cut(s) | 376, 1281, 2947 |
| BslFI | GGGAC | 3 cut(s) | 2201, 2387, 2659 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 960, 1056, 1281, 1470, 2062, 2093, 2258, 2393, 2953 |
| BsmAI | GTCTC | 6 cut(s) | 64, 1081, 1131, 1454, 1872, 2334 |
| BsmBI | CGTCTC | 1 cut(s) | 1454 |
| BsmFI | GGGAC | 3 cut(s) | 2201, 2387, 2659 |
| BsmI | GAATGC | 1 cut(s) | 2497 |
| BsnI | GGCC | 4 cut(s) | 1682, 2397, 2946, 2950 |
| Bso31I | GGTCTC | 1 cut(s) | 2334 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1105 |
| Bsp1407I | TGTACA | 2 cut(s) | 910, 2916 |
| Bsp19I | CCATGG | 1 cut(s) | 2332 |
| BspACI | CCGC | 7 cut(s) | 827, 1163, 1196, 1278, 2581, 2693, 2954 |
| BspANI | GGCC | 4 cut(s) | 1682, 2397, 2946, 2950 |
| BspCNI | CTCAG | 4 cut(s) | 656, 1464, 2577, 2584 |
| BspHI | TCATGA | 3 cut(s) | 786, 1570, 2641 |
| BspLI | GGNNCC | 4 cut(s) | 1061, 2085, 2396, 2675 |
| BspMAI | CTGCAG | 2 cut(s) | 2139, 2435 |
| BspMI | ACCTGC | 3 cut(s) | 440, 1876, 1992 |
| BspPI | GGATC | 6 cut(s) | 1054, 1067, 1414, 1575, 1915, 2111 |
| BspT107I | GGYRCC | 1 cut(s) | 2083 |
| BspTI | CTTAAG | 1 cut(s) | 2744 |
| BspTNI | GGTCTC | 1 cut(s) | 2334 |
| BsrFI | RCCGGY | 1 cut(s) | 2946 |
| BsrGI | TGTACA | 2 cut(s) | 910, 2916 |
| BsrI | ACTGG | 2 cut(s) | 350, 1960 |
| BssAI | RCCGGY | 1 cut(s) | 2946 |
| BssECI | CCNNGG | 6 cut(s) | 507, 1355, 1683, 1797, 1917, 2332 |
| BssSI | CACGAG | 1 cut(s) | 1078 |
| BssT1I | CCWWGG | 3 cut(s) | 1355, 1683, 2332 |
| Bst2BI | CACGAG | 1 cut(s) | 1078 |
| Bst2UI | CCWGG | 5 cut(s) | 216, 509, 1064, 1798, 3039 |
| Bst4CI | ACNGT | 8 cut(s) | 296, 851, 1157, 1609, 1633, 1702, 1821, 2018 |
| Bst6I | CTCTTC | 2 cut(s) | 1719, 3180 |
| BstAFI | CTTAAG | 1 cut(s) | 2744 |
| BstAUI | TGTACA | 2 cut(s) | 910, 2916 |
| BstBAI | YACGTR | 1 cut(s) | 2700 |
| BstC8I | GCNNGC | 6 cut(s) | 709, 939, 1165, 2082, 2948, 2952 |
| BstDEI | CTNAG | 8 cut(s) | 196, 398, 458, 643, 879, 1451, 2585, 2592 |
| BstDSI | CCRYGG | 2 cut(s) | 1917, 2332 |
| BstEII | GGTNACC | 1 cut(s) | 1191 |
| BstF5I | GGATG | 9 cut(s) | 385, 493, 913, 1027, 1259, 1982, 2077, 2560, 2965 |
| BstMAI | GTCTC | 6 cut(s) | 64, 1081, 1131, 1454, 1872, 2334 |
| BstMCI | CGRYCG | 1 cut(s) | 1447 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 2072, 2081 |
| BstNI | CCWGG | 5 cut(s) | 216, 509, 1064, 1798, 3039 |
| BstNSI | RCATGY | 5 cut(s) | 863, 941, 1101, 1520, 2052 |
| BstPI | GGTNACC | 1 cut(s) | 1191 |
| BstSCI | CCNGG | 7 cut(s) | 214, 374, 507, 1062, 1280, 1796, 3037 |
| BstSFI | CTRYAG | 6 cut(s) | 945, 1266, 1425, 2135, 2431, 2445 |
| BstV1I | GCAGC | 6 cut(s) | 13, 928, 1408, 1934, 2359, 2720 |
| BstV2I | GAAGAC | 3 cut(s) | 1003, 1181, 2024 |
| BstX2I | RGATCY | 1 cut(s) | 1059 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1864 |
| BstYI | RGATCY | 1 cut(s) | 1059 |
| BsuRI | GGCC | 4 cut(s) | 1682, 2397, 2946, 2950 |
| BtgI | CCRYGG | 2 cut(s) | 1917, 2332 |
| BtsCI | GGATG | 9 cut(s) | 385, 493, 913, 1027, 1259, 1982, 2077, 2560, 2965 |
| BtsI | GCAGTG | 2 cut(s) | 21, 3012 |
| BtsIMutI | CAGTG | 4 cut(s) | 21, 856, 1193, 3012 |
| BveI | ACCTGC | 3 cut(s) | 440, 1876, 1992 |
| Cac8I | GCNNGC | 6 cut(s) | 709, 939, 1165, 2082, 2948, 2952 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2507, 2584 |
| CciI | TCATGA | 3 cut(s) | 786, 1570, 2641 |
| Cfr10I | RCCGGY | 1 cut(s) | 2946 |
| Cfr13I | GGNCC | 4 cut(s) | 452, 511, 2395, 2673 |
| Csp6I | GTAC | 8 cut(s) | 44, 160, 425, 911, 1629, 1655, 2184, 2917 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2772, 2807 |
| CviQI | GTAC | 8 cut(s) | 44, 160, 425, 911, 1629, 1655, 2184, 2917 |
| DdeI | CTNAG | 8 cut(s) | 196, 398, 458, 643, 879, 1451, 2585, 2592 |
| DraI | TTTAAA | 2 cut(s) | 438, 2422 |
| DraIII | CACNNNGTG | 1 cut(s) | 296 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1182, 2461 |
| EaeI | YGGCCR | 1 cut(s) | 2948 |
| Eam1104I | CTCTTC | 2 cut(s) | 1719, 3180 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1182, 2461 |
| EarI | CTCTTC | 2 cut(s) | 1719, 3180 |
| Eco130I | CCWWGG | 3 cut(s) | 1355, 1683, 2332 |
| Eco31I | GGTCTC | 1 cut(s) | 2334 |
| Eco32I | GATATC | 1 cut(s) | 640 |
| Eco47I | GGWCC | 3 cut(s) | 452, 511, 2673 |
| Eco91I | GGTNACC | 1 cut(s) | 1191 |
| EcoO109I | RGGNCCY | 1 cut(s) | 452 |
| EcoO65I | GGTNACC | 1 cut(s) | 1191 |
| EcoRI | GAATTC | 1 cut(s) | 1459 |
| EcoRII | CCWGG | 5 cut(s) | 214, 507, 1062, 1796, 3037 |
| EcoRV | GATATC | 1 cut(s) | 640 |
| EcoT14I | CCWWGG | 3 cut(s) | 1355, 1683, 2332 |
| EcoT22I | ATGCAT | 2 cut(s) | 2050, 2543 |
| ErhI | CCWWGG | 3 cut(s) | 1355, 1683, 2332 |
| Esp3I | CGTCTC | 1 cut(s) | 1454 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1494, 1526, 1701, 1733 |
| FaqI | GGGAC | 3 cut(s) | 2201, 2387, 2659 |
| FauI | CCCGC | 1 cut(s) | 1156 |
| FauNDI | CATATG | 1 cut(s) | 1297 |
| FbaI | TGATCA | 1 cut(s) | 7 |
| Fnu4HI | GCNGC | 8 cut(s) | 27, 942, 1422, 1923, 2348, 2582, 2694, 2709 |
| FokI | GGATG | 9 cut(s) | 372, 500, 920, 1034, 1266, 1989, 2084, 2567, 2952 |
| FseI | GGCCGGCC | 1 cut(s) | 2950 |
| Fsp4HI | GCNGC | 8 cut(s) | 27, 942, 1422, 1923, 2348, 2582, 2694, 2709 |
| FspBI | CTAG | 7 cut(s) | 390, 1001, 1040, 1179, 1779, 2354, 2526 |
| GluI | GCNGC | 8 cut(s) | 27, 942, 1422, 1923, 2348, 2582, 2694, 2709 |
| GsaI | CCCAGC | 2 cut(s) | 979, 2989 |
| GsuI | CTGGAG | 2 cut(s) | 2262, 3060 |
| HaeIII | GGCC | 4 cut(s) | 1682, 2397, 2946, 2950 |
| HapII | CCGG | 3 cut(s) | 376, 1281, 2947 |
| HincII | GTYRAC | 4 cut(s) | 1045, 1605, 1965, 2651 |
| HindII | GTYRAC | 4 cut(s) | 1045, 1605, 1965, 2651 |
| HindIII | AAGCTT | 4 cut(s) | 1535, 1715, 2727, 3011 |
| HpaII | CCGG | 3 cut(s) | 376, 1281, 2947 |
| HphI | GGTGA | 8 cut(s) | 17, 308, 809, 1078, 1097, 1163, 1502, 1844 |
| Hpy99I | CGWCG | 1 cut(s) | 2850 |
| HpyAV | CCTTC | 7 cut(s) | 64, 1500, 1703, 2056, 2221, 2769, 3073 |
| HpyCH4III | ACNGT | 8 cut(s) | 296, 851, 1157, 1609, 1633, 1702, 1821, 2018 |
| HpyCH4IV | ACGT | 1 cut(s) | 2699 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 2072, 2081 |
| HpyF3I | CTNAG | 8 cut(s) | 196, 398, 458, 643, 879, 1451, 2585, 2592 |
| HpySE526I | ACGT | 1 cut(s) | 2699 |
| KroI | GCCGGC | 1 cut(s) | 2946 |
| KroNI | GCCGGC | 1 cut(s) | 2948 |
| Ksp22I | TGATCA | 1 cut(s) | 7 |
| LmnI | GCTCC | 2 cut(s) | 2243, 2525 |
| Lsp1109I | GCAGC | 6 cut(s) | 13, 928, 1408, 1934, 2359, 2720 |
| LweI | GCATC | 9 cut(s) | 481, 694, 856, 1483, 1754, 2062, 2359, 2550, 3118 |
| MaeI | CTAG | 7 cut(s) | 390, 1001, 1040, 1179, 1779, 2354, 2526 |
| MaeII | ACGT | 1 cut(s) | 2699 |
| MaeIII | GTNAC | 9 cut(s) | 199, 631, 949, 1151, 1191, 1240, 1979, 2261, 2288 |
| MfeI | CAATTG | 2 cut(s) | 54, 182 |
| MflI | RGATCY | 1 cut(s) | 1059 |
| MhlI | GDGCHC | 1 cut(s) | 1105 |
| MlyI | GAGTC | 5 cut(s) | 618, 1040, 1192, 2118, 2450 |
| MmeI | TCCRAC | 3 cut(s) | 885, 2532, 2632 |
| Mph1103I | ATGCAT | 2 cut(s) | 2050, 2543 |
| MroNI | GCCGGC | 1 cut(s) | 2946 |
| MroXI | GAANNNNTTC | 2 cut(s) | 697, 2574 |
| MslI | CAYNNNNRTG | 4 cut(s) | 864, 1862, 2152, 2546 |
| MspA1I | CMGCKG | 2 cut(s) | 2581, 2954 |
| MspCI | CTTAAG | 1 cut(s) | 2744 |
| MspI | CCGG | 3 cut(s) | 376, 1281, 2947 |
| MspR9I | CCNGG | 7 cut(s) | 216, 376, 509, 1064, 1282, 1798, 3039 |
| MunI | CAATTG | 2 cut(s) | 54, 182 |
| Mva1269I | GAATGC | 1 cut(s) | 2497 |
| MvaI | CCWGG | 5 cut(s) | 216, 509, 1064, 1798, 3039 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 2072, 2081 |
| NaeI | GCCGGC | 1 cut(s) | 2948 |
| NciI | CCSGG | 2 cut(s) | 376, 1282 |
| NcoI | CCATGG | 1 cut(s) | 2332 |
| NdeI | CATATG | 1 cut(s) | 1297 |
| NgoMIV | GCCGGC | 1 cut(s) | 2946 |
| NlaIV | GGNNCC | 4 cut(s) | 1061, 2085, 2396, 2675 |
| NmeAIII | GCCGAG | 1 cut(s) | 1537 |
| NmuCI | GTSAC | 3 cut(s) | 199, 1151, 2261 |
| NsiI | ATGCAT | 2 cut(s) | 2050, 2543 |
| NspI | RCATGY | 5 cut(s) | 863, 941, 1101, 1520, 2052 |
| OliI | CACNNNNGTG | 1 cut(s) | 1862 |
| PaeI | GCATGC | 1 cut(s) | 941 |
| PagI | TCATGA | 3 cut(s) | 786, 1570, 2641 |
| PciI | ACATGT | 2 cut(s) | 1097, 1516 |
| PctI | GAATGC | 1 cut(s) | 2497 |
| PdiI | GCCGGC | 1 cut(s) | 2948 |
| PdmI | GAANNNNTTC | 2 cut(s) | 697, 2574 |
| PflFI | GACNNNGTC | 1 cut(s) | 2752 |
| PfoI | TCCNGGA | 1 cut(s) | 214 |
| PkrI | GCNGC | 8 cut(s) | 28, 943, 1423, 1924, 2349, 2583, 2695, 2710 |
| Ple19I | CGATCG | 1 cut(s) | 1447 |
| PleI | GAGTC | 5 cut(s) | 617, 1040, 1191, 2117, 2450 |
| PpsI | GAGTC | 5 cut(s) | 617, 1040, 1191, 2117, 2450 |
| Ppu21I | YACGTR | 1 cut(s) | 2700 |
| PpuMI | RGGWCCY | 1 cut(s) | 452 |
| PscI | ACATGT | 2 cut(s) | 1097, 1516 |
| PsiI | TTATAA | 2 cut(s) | 2022, 2723 |
| Psp5II | RGGWCCY | 1 cut(s) | 452 |
| Psp6I | CCWGG | 5 cut(s) | 214, 507, 1062, 1796, 3037 |
| PspEI | GGTNACC | 1 cut(s) | 1191 |
| PspFI | CCCAGC | 2 cut(s) | 975, 2985 |
| PspGI | CCWGG | 5 cut(s) | 214, 507, 1062, 1796, 3037 |
| PspN4I | GGNNCC | 4 cut(s) | 1061, 2085, 2396, 2675 |
| PspPI | GGNCC | 4 cut(s) | 452, 511, 2395, 2673 |
| PspPPI | RGGWCCY | 1 cut(s) | 452 |
| PstI | CTGCAG | 2 cut(s) | 2139, 2435 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2507, 2584 |
| PsuI | RGATCY | 1 cut(s) | 1059 |
| PsyI | GACNNNGTC | 1 cut(s) | 2752 |
| PvuI | CGATCG | 1 cut(s) | 1447 |
| RigI | GGCCGGCC | 1 cut(s) | 2950 |
| RsaI | GTAC | 8 cut(s) | 45, 161, 426, 912, 1630, 1656, 2185, 2918 |
| RsaNI | GTAC | 8 cut(s) | 44, 160, 425, 911, 1629, 1655, 2184, 2917 |
| RseI | CAYNNNNRTG | 4 cut(s) | 864, 1862, 2152, 2546 |
| SatI | GCNGC | 8 cut(s) | 27, 942, 1422, 1923, 2348, 2582, 2694, 2709 |
| Sau96I | GGNCC | 4 cut(s) | 452, 511, 2395, 2673 |
| SchI | GAGTC | 5 cut(s) | 618, 1040, 1192, 2118, 2450 |
| ScrFI | CCNGG | 7 cut(s) | 216, 376, 509, 1064, 1282, 1798, 3039 |
| SduI | GDGCHC | 1 cut(s) | 1105 |
| SfaNI | GCATC | 9 cut(s) | 481, 694, 856, 1483, 1754, 2062, 2359, 2550, 3118 |
| SfcI | CTRYAG | 6 cut(s) | 945, 1266, 1425, 2135, 2431, 2445 |
| SinI | GGWCC | 3 cut(s) | 452, 511, 2673 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 864, 1862, 2152, 2546 |
| SmlI | CTYRAG | 4 cut(s) | 680, 1373, 2744, 2859 |
| SmoI | CTYRAG | 4 cut(s) | 680, 1373, 2744, 2859 |
| SpeI | ACTAGT | 2 cut(s) | 1039, 2525 |
| SphI | GCATGC | 1 cut(s) | 941 |
| SsiI | CCGC | 7 cut(s) | 827, 1163, 1196, 1278, 2581, 2693, 2954 |
| SspI | AATATT | 1 cut(s) | 772 |
| SspMI | CTAG | 7 cut(s) | 390, 1001, 1040, 1179, 1779, 2354, 2526 |
| StyD4I | CCNGG | 7 cut(s) | 214, 374, 507, 1062, 1280, 1796, 3037 |
| StyI | CCWWGG | 3 cut(s) | 1355, 1683, 2332 |
| TaaI | ACNGT | 8 cut(s) | 296, 851, 1157, 1609, 1633, 1702, 1821, 2018 |
| TaiI | ACGT | 1 cut(s) | 2702 |
| TaqI | TCGA | 2 cut(s) | 1443, 2107 |
| TatI | WGTACW | 5 cut(s) | 43, 910, 1654, 2183, 2916 |
| TauI | GCSGC | 2 cut(s) | 2584, 2696 |
| TscAI | CASTG | 4 cut(s) | 28, 856, 1193, 3012 |
| TseFI | GTSAC | 3 cut(s) | 199, 1151, 2261 |
| TseI | GCWGC | 6 cut(s) | 26, 941, 1421, 1922, 2347, 2708 |
| Tsp45I | GTSAC | 3 cut(s) | 199, 1151, 2261 |
| TspGWI | ACGGA | 2 cut(s) | 650, 2626 |
| TspRI | CASTG | 4 cut(s) | 28, 856, 1193, 3012 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2752 |
| Vha464I | CTTAAG | 1 cut(s) | 2744 |
| VpaK11BI | GGWCC | 3 cut(s) | 452, 511, 2673 |
| XapI | RAATTY | 8 cut(s) | 146, 500, 693, 814, 1459, 2440, 2574, 3210 |
| XbaI | TCTAGA | 1 cut(s) | 2353 |
| XceI | RCATGY | 5 cut(s) | 863, 941, 1101, 1520, 2052 |
| XmnI | GAANNNNTTC | 2 cut(s) | 697, 2574 |
| XspI | CTAG | 7 cut(s) | 390, 1001, 1040, 1179, 1779, 2354, 2526 |
| Zsp2I | ATGCAT | 2 cut(s) | 2050, 2543 |