Prupe.3G060700_v2.0.a1

Homeobox-leucine zipper protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
4364136 .. 4371312
7177 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G060700.1

Sequence Viewer

Length: 2514 bp
ATGGCTATGTCCTGCAAGGATGGTAAGGGAGGATTAGATAATGGCAAGTATGTGAGGTACACACCTGAGCAGGTTGAGGCCCTTGAAAGGCTCTATCATGAATGCCCCAAACCCAGTTCGATTCGCCGCCAACAGCTTATTAGGGAGTGCCCAATTCTCTCTAACATCGAGCCCAAACAAATTAAGGTTTGGTTCCAGAATAGAAGATGTAGAGAGAAGCAGCGGAAAGAGGCTTCGCGCCTCCAAGCTGTCAATAGGAAGCTCACCGCTATGAATAAGCTTTTAATGGAGGAAAATGATAGGTTGCAGAAGCAGGTGTCTCATCTGGTGTATGAAAATGGTTATTTCCGTCAGCATACCCAGGGGACAACGCTTGCAACCAAAGACACGAGTTGTGAATCAGTGGTGACGAGTGGTCAACACCATTTGACACCTCAGCATCCGCCAAGGGATGCAAGTCCTGCAGGACTTTTGTCCATTGCAGAAGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGAGTGGCAGCACGAGCCTGCGGCCTGGTGGGTCTAGAGCCTACCAGGGTTGCAGAGATCCTCAAAGATCTCCCTTCGTGGCTGCGTGATTGCCGCGCTGTAGATGTTTTGAATGTACTGCCTACAGCAAACGGTGGAACCATTGAGTTGCTCTACATGCAGCTCTATGCGCCGACAACTTTGGCGCCTGCATGTGATTTCTGGCTGTTGCGCTATACTTCTGTTTTAGAGGATGGCAGCCTAGTGATTTGTGTGAGGTCTCTGAAAAACACTCAAAATGGTCCAACCATGCCTCCAGTGCAGCATTTTGTTAGAGCAGAAATGCTGCCTAGTGGCTACCTCATACGACCCTGTGAAGGGGGTGGTTCAATTATACATATTGTTGACCATATGGATTTGGAGCCTTGTAGCGTACCCGAAGTCTTGCGCCCATTGTATGAATCATCCGCTGTTCTTGCTCAAAAGATGACTATGGCGGCTTTACGCCAGCTGAGGCAGATAGCACATGAGGTTTCTCAATCTAATGTCACAGGGTGGGGCAGACGTCCTGCAGCTCTACGAGCACTAAGCCAGAGGCTTAGCAGGGGTTTTAATGAGGCACTTAATGGATTTACTGATGAGGGGTGGTCAATGATGGGAAATGATGGCATGGATGATGTTACTATCCTCATAAACTCATCTCCTGACAAGTTAATGGGTTTAAATCTTTCCTTTGCTAATGGATTTCCAGCTGTCAGTAATTCTGTATTATGTGCTAAAGCATCAATGCTGCTACAGAATGTGCCTCCTGCTATCCTTCTTAGGTTCCTGCGTGAGCATAGATCAGAATGGGCAGACAACAATATTGATGCTTACTCAGCTGCAGCTGTTAAAGTTGGTCCTTGTAGCTTAGCTGGGTCACGAGTTGGAAGTTTCGGAGGTCAAGTTATACTCCCCCTGGCTCACACTATTGAACATGAAGAGTTCTTGGAAGTCATTAAACTGGAAGGTGTTGGCCATTCTCCTGAAGATGCAATGATGCCGAGAGAAATGTTTCTCTTGCAACTATGCAGTGGAATGGACGAAAATGCTGTGGGTTCCTGTGCTGAACTCATATTTGCTCCGATTGATGCTTCCTTTGCTGATGATGCACCTCTTCTGCCTTCTGGTTTTCGCATCATTCCTCTTGATTATGGGAAGGAAGCCTCCAGTCCAAACCGCACCTTGGACCTTGCTTCTGCCCTTGAAATTGGACCAACTGGAAATAAAGCATCGAGTGAATTTTCTGCAAATACTGGTTGTGTGAGATCTGTGATGACTATAGCATTTGAATTTGCATGCGAGAGCCACATGCAAGAACATGTAGCATCCATGGCCCGGCAATATGTTCGCAGCATCATATCTTCAGTTCAGAGGGTGGCATTAGCACTATCTCCTTCACATTTAAGTTCACATGCTGGCCTTCGGTCACCACTTGGTACTCCTGAAGCCCAAACACTTGCTCGTTGGATCTGCAACAGTTACAGGTGCTATTTGGGTGTGGAGCTGCTCAAATCCTCCACTGAAGGAGGTGAATCCATCCTCAAATCCTTGTGGCATCACTCAGATGCAATTATGTGCTGCTCTCTGAAGGCATTGCCAGTTTTTACCTTTGCAAACCAGGCAGGGCTCGACATGCTAGAGACCACCTTGGTTGCACTGCAAGACATAACTCTGGAAAAGATATTTGATGACCATGGACGGAAGACTCTCTGCTCAGAATTCCCGCAAATAATGCAACAGGGTTTTGCTTGCCTTCAAGGTGGCATATGCCTTTCCAGCATGGGGCGACCGGTGTCGTATGAGAGAGCAGTGGCTTGGAAAGTGTTGAATGAAGAGGAGACAGCTCACTGCATGTGTTTTCTATTTGTAAACTGGTCTTTCGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

838

Amino Acids

91.8

Weight (kDa)

6.06

Isoelectric Point (pI)

50.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014924)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G52150 AT1G52150 AT1G52150
fragaria_vesca FvH4_6g32240
malus_domestica MD09G1205400.v1.1 MD17G1185400.v1.1
prunus_persica Prupe.3G060700_v2.0.a1
pyrus_communis pycom09g12200 pycom17g19500
rosa_chinensis RchiOBHm_Chr2g0140131
rosa_laevigata RLG00000019854
rosa_roxburghii Rroxscaffold_2G00105020
rosa_rugosa Rorug02G0361400
rosa_samantha Rh2BG422400 Rh2CG398100
rosa_wichuraiana Rw2G033760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 304
AatII GACGTC 1 cut(s) 1153
Acc36I ACCTGC 2 cut(s) 61, 304
AccB1I GGYRCC 1 cut(s) 790
AccII CGCG 2 cut(s) 238, 702
AccIII TCCGGA 1 cut(s) 565
AclWI GGATC 2 cut(s) 658, 2102
AcoI YGGCCR 1 cut(s) 1600
AcsI RAATTY 3 cut(s) 1865, 1916, 2345
AcuI CTGAAG 5 cut(s) 1632, 1974, 2091, 2169, 2234
AcyI GRCGYC 2 cut(s) 791, 1150
AdeI CACNNNGTG 1 cut(s) 1140
AfaI GTAC 4 cut(s) 59, 723, 1020, 2065
AfiI CCNNNNNNNGG 6 cut(s) 87, 962, 963, 1810, 1962, 2409
AflIII ACRYGT 1 cut(s) 1945
AgeI ACCGGT 1 cut(s) 2416
AgsI TTSAA 9 cut(s) 86, 510, 718, 975, 1559, 1832, 1916, 2384, 2455
AhdI GACNNNNNGTC 1 cut(s) 414
AjnI CCWGG 7 cut(s) 360, 547, 559, 630, 650, 1542, 2244
AleI CACNNNNGTG 1 cut(s) 608
Alw21I GWGCWC 1 cut(s) 1171
Alw26I GTCTC 4 cut(s) 324, 870, 2261, 2459
AlwI GGATC 2 cut(s) 658, 2102
Aor13HI TCCGGA 1 cut(s) 565
AoxI GGCC 5 cut(s) 78, 628, 1600, 1959, 2044
ApoI RAATTY 3 cut(s) 1865, 1916, 2345
AsiGI ACCGGT 1 cut(s) 2416
Asp700I GAANNNNTTC 1 cut(s) 1638
AspLEI GCGC 6 cut(s) 240, 704, 778, 793, 819, 1035
AspS9I GGNCC 8 cut(s) 79, 538, 563, 887, 1484, 1813, 1838, 1960
AsuC2I CCSGG 1 cut(s) 1963
AsuHPI GGTGA 4 cut(s) 256, 418, 2046, 2168
AvaII GGWCC 6 cut(s) 538, 563, 887, 1484, 1813, 1838
BaeGI GKGCMC 1 cut(s) 152
BalI TGGCCA 1 cut(s) 1602
BanI GGYRCC 1 cut(s) 790
BanII GRGCYC 2 cut(s) 174, 2256
BauI CACGAG 3 cut(s) 388, 618, 1506
BbsI GAAGAC 1 cut(s) 2336
Bbv12I GWGCWC 1 cut(s) 1171
BbvCI CCTCAGC 2 cut(s) 435, 1097
BccI CCATC 5 cut(s) 14, 833, 1234, 1244, 2171
BcgI CGANNNNNNTGC 2 cut(s) 1955, 1989
BciT130I CCWGG 7 cut(s) 362, 549, 561, 632, 652, 1544, 2246
BcnI CCSGG 1 cut(s) 1963
BcoDI GTCTC 4 cut(s) 324, 870, 2261, 2459
BfaI CTAG 4 cut(s) 641, 848, 936, 2264
BfmI CTRYAG 7 cut(s) 462, 705, 729, 1155, 1379, 1467, 1905
BfoI RGCGCY 1 cut(s) 794
BfuAI ACCTGC 2 cut(s) 61, 304
BglII AGATCT 2 cut(s) 673, 1892
BlpI GCTNAGC 2 cut(s) 1184, 1495
Bme1390I CCNGG 8 cut(s) 362, 549, 561, 632, 652, 1544, 1963, 2246
Bme18I GGWCC 6 cut(s) 538, 563, 887, 1484, 1813, 1838
BmeRI GACNNNNNGTC 1 cut(s) 414
BmgT120I GGNCC 8 cut(s) 79, 538, 563, 887, 1484, 1813, 1838, 1960
BmiI GGNNCC 7 cut(s) 194, 539, 745, 792, 1008, 1412, 1684
BmrFI CCNGG 8 cut(s) 362, 549, 561, 632, 652, 1544, 1963, 2246
BmrI ACTGGG 1 cut(s) 108
BmuI ACTGGG 1 cut(s) 108
BoxI GACNNNNGTC 2 cut(s) 472, 2419
BpiI GAAGAC 1 cut(s) 2336
BpmI CTGGAG 3 cut(s) 627, 885, 1777
Bpu10I CCTNAGC 3 cut(s) 66, 435, 1097
Bpu1102I GCTNAGC 2 cut(s) 1184, 1495
BpuMI CCSGG 1 cut(s) 1963
BsaHI GRCGYC 2 cut(s) 791, 1150
BsaI GGTCTC 2 cut(s) 870, 2261
BsaJI CCNNGG 9 cut(s) 360, 361, 446, 651, 1542, 1809, 1956, 2274, 2320
BsaWI WCCGGW 2 cut(s) 565, 2416
BsaXI ACNNNNNCTCC 4 cut(s) 883, 913, 1515, 1545
Bsc4I CCNNNNNNNGG 6 cut(s) 87, 962, 963, 1810, 1962, 2409
Bse118I RCCGGY 1 cut(s) 2416
Bse3DI GCAATG 3 cut(s) 477, 1626, 2219
BseAI TCCGGA 1 cut(s) 565
BseBI CCWGG 7 cut(s) 362, 549, 561, 632, 652, 1544, 2246
BseDI CCNNGG 9 cut(s) 360, 361, 446, 651, 1542, 1809, 1956, 2274, 2320
BseGI GGATG 8 cut(s) 25, 439, 457, 844, 1049, 1264, 1952, 2163
BseLI CCNNNNNNNGG 6 cut(s) 87, 962, 963, 1810, 1962, 2409
BseMI GCAATG 3 cut(s) 477, 1626, 2219
BseMII CTCAG 6 cut(s) 57, 449, 1088, 1476, 2202, 2355
BseRI GAGGAG 1 cut(s) 2477
BseSI GKGCMC 1 cut(s) 152
BseYI CCCAGC 1 cut(s) 1499
BsgI GTGCAG 1 cut(s) 926
Bsh1236I CGCG 2 cut(s) 238, 702
Bsh1285I CGRYCG 1 cut(s) 2417
BshFI GGCC 5 cut(s) 80, 630, 1602, 1961, 2046
BshNI GGYRCC 1 cut(s) 790
BshTI ACCGGT 1 cut(s) 2416
BsiEI CGRYCG 1 cut(s) 2417
BsiHKAI GWGCWC 1 cut(s) 1171
BsiSI CCGG 3 cut(s) 566, 1963, 2417
BslFI GGGAC 1 cut(s) 379
BslI CCNNNNNNNGG 6 cut(s) 87, 962, 963, 1810, 1962, 2409
BsmAI GTCTC 4 cut(s) 324, 870, 2261, 2459
BsmFI GGGAC 1 cut(s) 379
BsmI GAATGC 1 cut(s) 107
BsnI GGCC 5 cut(s) 80, 630, 1602, 1961, 2046
Bso31I GGTCTC 2 cut(s) 870, 2261
Bsp1286I GDGCHC 4 cut(s) 152, 174, 1171, 2256
Bsp13I TCCGGA 1 cut(s) 565
Bsp143I GATC 5 cut(s) 663, 673, 1427, 1892, 2094
Bsp1720I GCTNAGC 2 cut(s) 1184, 1495
Bsp19I CCATGG 2 cut(s) 1956, 2320
BspANI GGCC 5 cut(s) 80, 630, 1602, 1961, 2046
BspCNI CTCAG 6 cut(s) 58, 448, 1089, 1475, 2201, 2354
BspEI TCCGGA 1 cut(s) 565
BspFNI CGCG 2 cut(s) 238, 702
BspHI TCATGA 1 cut(s) 97
BspLI GGNNCC 7 cut(s) 194, 539, 745, 792, 1008, 1412, 1684
BspMAI CTGCAG 3 cut(s) 466, 1159, 1471
BspMI ACCTGC 2 cut(s) 61, 304
BspPI GGATC 2 cut(s) 658, 2102
BspT107I GGYRCC 1 cut(s) 790
BspTNI GGTCTC 2 cut(s) 870, 2261
BsrDI GCAATG 3 cut(s) 477, 1626, 2219
BsrFI RCCGGY 1 cut(s) 2416
BssAI RCCGGY 1 cut(s) 2416
BssECI CCNNGG 9 cut(s) 360, 361, 446, 651, 1542, 1809, 1956, 2274, 2320
BssMI GATC 5 cut(s) 663, 673, 1427, 1892, 2094
BssNI GRCGYC 2 cut(s) 791, 1150
BssSI CACGAG 3 cut(s) 388, 618, 1506
BssT1I CCWWGG 5 cut(s) 446, 1809, 1956, 2274, 2320
Bst2BI CACGAG 3 cut(s) 388, 618, 1506
Bst2UI CCWGG 7 cut(s) 362, 549, 561, 632, 652, 1544, 2246
Bst4CI ACNGT 2 cut(s) 740, 2105
Bst6I CTCTTC 3 cut(s) 1560, 1746, 2454
BstACI GRCGYC 2 cut(s) 791, 1150
BstAPI GCANNNNNTGC 2 cut(s) 461, 2359
BstC8I GCNNGC 7 cut(s) 375, 625, 795, 1094, 1924, 2044, 2377
BstDSI CCRYGG 2 cut(s) 1956, 2320
BstEII GGTNACC 1 cut(s) 2052
BstF5I GGATG 8 cut(s) 25, 439, 457, 844, 1049, 1264, 1952, 2163
BstFNI CGCG 2 cut(s) 238, 702
BstH2I RGCGCY 1 cut(s) 794
BstHHI GCGC 6 cut(s) 240, 704, 778, 793, 819, 1035
BstKTI GATC 5 cut(s) 666, 676, 1430, 1895, 2097
BstMAI GTCTC 4 cut(s) 324, 870, 2261, 2459
BstMBI GATC 5 cut(s) 663, 673, 1427, 1892, 2094
BstMCI CGRYCG 1 cut(s) 2417
BstNI CCWGG 7 cut(s) 362, 549, 561, 632, 652, 1544, 2246
BstNSI RCATGY 8 cut(s) 766, 801, 1926, 1939, 1949, 2042, 2263, 2482
BstPAI GACNNNNGTC 2 cut(s) 472, 2419
BstPI GGTNACC 1 cut(s) 2052
BstSCI CCNGG 8 cut(s) 360, 547, 559, 630, 650, 1542, 1961, 2244
BstSFI CTRYAG 7 cut(s) 462, 705, 729, 1155, 1379, 1467, 1905
BstSLI GKGCMC 1 cut(s) 152
BstUI CGCG 2 cut(s) 238, 702
BstV2I GAAGAC 1 cut(s) 2336
BstX2I RGATCY 4 cut(s) 663, 673, 1892, 2094
BstXI CCANNNNNNTGG 1 cut(s) 548
BstYI RGATCY 4 cut(s) 663, 673, 1892, 2094
BsuRI GGCC 5 cut(s) 80, 630, 1602, 1961, 2046
BtgI CCRYGG 2 cut(s) 1956, 2320
BtsCI GGATG 8 cut(s) 25, 439, 457, 844, 1049, 1264, 1952, 2163
BtsI GCAGTG 4 cut(s) 1663, 2282, 2442, 2473
BtsIMutI CAGTG 8 cut(s) 408, 603, 909, 1663, 2145, 2282, 2442, 2473
BveI ACCTGC 2 cut(s) 61, 304
Cac8I GCNNGC 7 cut(s) 375, 625, 795, 1094, 1924, 2044, 2377
CciI TCATGA 1 cut(s) 97
CfoI GCGC 6 cut(s) 240, 704, 778, 793, 819, 1035
Cfr10I RCCGGY 1 cut(s) 2416
Cfr13I GGNCC 8 cut(s) 79, 538, 563, 887, 1484, 1813, 1838, 1960
Csp6I GTAC 4 cut(s) 58, 722, 1019, 2064
CspAI ACCGGT 1 cut(s) 2416
CspCI CAANNNNNGTGG 2 cut(s) 2260, 2295
CviQI GTAC 4 cut(s) 58, 722, 1019, 2064
DinI GGCGCC 1 cut(s) 792
DpnI GATC 5 cut(s) 665, 675, 1429, 1894, 2096
DpnII GATC 5 cut(s) 663, 673, 1427, 1892, 2094
DraI TTTAAA 1 cut(s) 1308
DraIII CACNNNGTG 1 cut(s) 1140
DriI GACNNNNNGTC 1 cut(s) 414
EaeI YGGCCR 1 cut(s) 1600
Eam1104I CTCTTC 3 cut(s) 1560, 1746, 2454
Eam1105I GACNNNNNGTC 1 cut(s) 414
EarI CTCTTC 3 cut(s) 1560, 1746, 2454
EciI GGCGGA 1 cut(s) 432
Eco130I CCWWGG 5 cut(s) 446, 1809, 1956, 2274, 2320
Eco24I GRGCYC 2 cut(s) 174, 2256
Eco31I GGTCTC 2 cut(s) 870, 2261
Eco47I GGWCC 6 cut(s) 538, 563, 887, 1484, 1813, 1838
Eco57I CTGAAG 5 cut(s) 1632, 1974, 2091, 2169, 2234
Eco91I GGTNACC 1 cut(s) 2052
EcoO109I RGGNCCY 1 cut(s) 79
EcoO65I GGTNACC 1 cut(s) 2052
EcoRI GAATTC 1 cut(s) 2345
EcoRII CCWGG 7 cut(s) 360, 547, 559, 630, 650, 1542, 2244
EcoT14I CCWWGG 5 cut(s) 446, 1809, 1956, 2274, 2320
EcoT38I GRGCYC 2 cut(s) 174, 2256
EgeI GGCGCC 1 cut(s) 792
EheI GGCGCC 1 cut(s) 792
ErhI CCWWGG 5 cut(s) 446, 1809, 1956, 2274, 2320
FaqI GGGAC 1 cut(s) 379
FauI CCCGC 1 cut(s) 2358
FauNDI CATATG 2 cut(s) 996, 2393
FokI GGATG 8 cut(s) 32, 426, 464, 851, 1036, 1271, 1939, 2150
FriOI GRGCYC 2 cut(s) 174, 2256
FspBI CTAG 4 cut(s) 641, 848, 936, 2264
GlaI GCGC 6 cut(s) 239, 703, 777, 792, 818, 1034
GsaI CCCAGC 1 cut(s) 1503
GsuI CTGGAG 3 cut(s) 627, 885, 1777
HaeII RGCGCY 1 cut(s) 794
HaeIII GGCC 5 cut(s) 80, 630, 1602, 1961, 2046
HapII CCGG 3 cut(s) 566, 1963, 2417
HhaI GCGC 6 cut(s) 240, 704, 778, 793, 819, 1035
Hin1I GRCGYC 2 cut(s) 791, 1150
Hin6I GCGC 6 cut(s) 238, 702, 776, 791, 817, 1033
HinP1I GCGC 6 cut(s) 238, 702, 776, 791, 817, 1033
HincII GTYRAC 2 cut(s) 419, 991
HindII GTYRAC 2 cut(s) 419, 991
HindIII AAGCTT 1 cut(s) 278
HinfI GANTC 7 cut(s) 121, 398, 569, 579, 1046, 2159, 2332
HpaII CCGG 3 cut(s) 566, 1963, 2417
HphI GGTGA 4 cut(s) 256, 418, 2046, 2168
Hpy166II GTNNAC 5 cut(s) 60, 419, 991, 2036, 2497
Hpy188I TCNGA 9 cut(s) 870, 1432, 1523, 1710, 1998, 2191, 2214, 2344, 2513
Hpy8I GTNNAC 5 cut(s) 60, 419, 991, 2036, 2497
HpyCH4III ACNGT 2 cut(s) 740, 2105
HpyCH4IV ACGT 1 cut(s) 1150
HpySE526I ACGT 1 cut(s) 1150
Hsp92I GRCGYC 2 cut(s) 791, 1150
HspAI GCGC 6 cut(s) 238, 702, 776, 791, 817, 1033
KasI GGCGCC 1 cut(s) 790
Kpn2I TCCGGA 1 cut(s) 565
Kzo9I GATC 5 cut(s) 663, 673, 1427, 1892, 2094
LmnI GCTCC 3 cut(s) 1006, 1711, 2128
MaeI CTAG 4 cut(s) 641, 848, 936, 2264
MaeII ACGT 1 cut(s) 1150
MaeIII GTNAC 6 cut(s) 406, 1132, 1264, 1503, 2052, 2105
MalI GATC 5 cut(s) 665, 675, 1429, 1894, 2096
MboI GATC 5 cut(s) 663, 673, 1427, 1892, 2094
MboII GAAGA 8 cut(s) 216, 497, 1577, 1625, 1733, 1980, 2341, 2471
MflI RGATCY 4 cut(s) 663, 673, 1892, 2094
MhlI GDGCHC 4 cut(s) 152, 174, 1171, 2256
MlsI TGGCCA 1 cut(s) 1602
MluCI AATT 9 cut(s) 153, 180, 975, 1345, 1833, 1865, 1916, 2196, 2345
MluNI TGGCCA 1 cut(s) 1602
Mly113I GGCGCC 1 cut(s) 791
MlyI GAGTC 1 cut(s) 2326
MmeI TCCRAC 3 cut(s) 914, 1492, 2072
Mox20I TGGCCA 1 cut(s) 1602
MroI TCCGGA 1 cut(s) 565
MroXI GAANNNNTTC 1 cut(s) 1638
MscI TGGCCA 1 cut(s) 1602
MseI TTAA 9 cut(s) 183, 284, 1197, 1209, 1298, 1307, 1476, 1584, 2030
MslI CAYNNNNRTG 3 cut(s) 269, 608, 2190
Msp20I TGGCCA 1 cut(s) 1602
MspA1I CMGCKG 6 cut(s) 223, 1055, 1096, 1337, 1466, 1472
MspI CCGG 3 cut(s) 566, 1963, 2417
MspR9I CCNGG 8 cut(s) 362, 549, 561, 632, 652, 1544, 1963, 2246
Mva1269I GAATGC 1 cut(s) 107
MvaI CCWGG 7 cut(s) 362, 549, 561, 632, 652, 1544, 2246
MvnI CGCG 2 cut(s) 238, 702
NarI GGCGCC 1 cut(s) 791
NciI CCSGG 1 cut(s) 1963
NcoI CCATGG 2 cut(s) 1956, 2320
NdeI CATATG 2 cut(s) 996, 2393
NdeII GATC 5 cut(s) 663, 673, 1427, 1892, 2094
NlaIV GGNNCC 7 cut(s) 194, 539, 745, 792, 1008, 1412, 1684
NmeAIII GCCGAG 1 cut(s) 1653
NmuCI GTSAC 4 cut(s) 406, 1132, 1503, 2052
NspI RCATGY 8 cut(s) 766, 801, 1926, 1939, 1949, 2042, 2263, 2482
OliI CACNNNNGTG 1 cut(s) 608
PaeI GCATGC 1 cut(s) 1926
PagI TCATGA 1 cut(s) 97
PaqCI CACCTGC 1 cut(s) 304
PasI CCCWGGG 1 cut(s) 361
PciI ACATGT 1 cut(s) 1945
PctI GAATGC 1 cut(s) 107
PdmI GAANNNNTTC 1 cut(s) 1638
PfeI GAWTC 6 cut(s) 121, 398, 569, 579, 1046, 2159
PinAI ACCGGT 1 cut(s) 2416
PleI GAGTC 1 cut(s) 2326
PluTI GGCGCC 1 cut(s) 794
PpsI GAGTC 1 cut(s) 2326
PscI ACATGT 1 cut(s) 1945
PshAI GACNNNNGTC 2 cut(s) 472, 2419
Psp6I CCWGG 7 cut(s) 360, 547, 559, 630, 650, 1542, 2244
PspEI GGTNACC 1 cut(s) 2052
PspFI CCCAGC 1 cut(s) 1499
PspGI CCWGG 7 cut(s) 360, 547, 559, 630, 650, 1542, 2244
PspN4I GGNNCC 7 cut(s) 194, 539, 745, 792, 1008, 1412, 1684
PspPI GGNCC 8 cut(s) 79, 538, 563, 887, 1484, 1813, 1838, 1960
PstI CTGCAG 3 cut(s) 466, 1159, 1471
PsuI RGATCY 4 cut(s) 663, 673, 1892, 2094
PvuII CAGCTG 4 cut(s) 1096, 1337, 1466, 1472
RsaI GTAC 4 cut(s) 59, 723, 1020, 2065
RsaNI GTAC 4 cut(s) 58, 722, 1019, 2064
RseI CAYNNNNRTG 3 cut(s) 269, 608, 2190
SaqAI TTAA 9 cut(s) 183, 284, 1197, 1209, 1298, 1307, 1476, 1584, 2030
Sau3AI GATC 5 cut(s) 663, 673, 1427, 1892, 2094
Sau96I GGNCC 8 cut(s) 79, 538, 563, 887, 1484, 1813, 1838, 1960
SbfI CCTGCAGG 1 cut(s) 466
SchI GAGTC 1 cut(s) 2326
ScrFI CCNGG 8 cut(s) 362, 549, 561, 632, 652, 1544, 1963, 2246
SdaI CCTGCAGG 1 cut(s) 466
SduI GDGCHC 4 cut(s) 152, 174, 1171, 2256
SfcI CTRYAG 7 cut(s) 462, 705, 729, 1155, 1379, 1467, 1905
SfoI GGCGCC 1 cut(s) 792
SinI GGWCC 6 cut(s) 538, 563, 887, 1484, 1813, 1838
SmiMI CAYNNNNRTG 3 cut(s) 269, 608, 2190
SphI GCATGC 1 cut(s) 1926
Sse8387I CCTGCAGG 1 cut(s) 466
Sse9I AATT 9 cut(s) 153, 180, 975, 1345, 1833, 1865, 1916, 2196, 2345
SspDI GGCGCC 1 cut(s) 790
SspI AATATT 1 cut(s) 1450
SspMI CTAG 4 cut(s) 641, 848, 936, 2264
StyD4I CCNGG 8 cut(s) 360, 547, 559, 630, 650, 1542, 1961, 2244
StyI CCWWGG 5 cut(s) 446, 1809, 1956, 2274, 2320
TaaI ACNGT 2 cut(s) 740, 2105
TaiI ACGT 1 cut(s) 1153
TaqI TCGA 4 cut(s) 119, 168, 1859, 2256
TaqII GACCGA 1 cut(s) 2040
TasI AATT 9 cut(s) 153, 180, 975, 1345, 1833, 1865, 1916, 2196, 2345
TatI WGTACW 1 cut(s) 721
TauI GCSGC 4 cut(s) 129, 630, 702, 1085
TfiI GAWTC 6 cut(s) 121, 398, 569, 579, 1046, 2159
Tru1I TTAA 9 cut(s) 183, 284, 1197, 1209, 1298, 1307, 1476, 1584, 2030
Tru9I TTAA 9 cut(s) 183, 284, 1197, 1209, 1298, 1307, 1476, 1584, 2030
TscAI CASTG 8 cut(s) 408, 610, 909, 1663, 2152, 2289, 2442, 2480
TseFI GTSAC 4 cut(s) 406, 1132, 1503, 2052
Tsp45I GTSAC 4 cut(s) 406, 1132, 1503, 2052
TspDTI ATGAA 7 cut(s) 114, 287, 348, 569, 1059, 1578, 2472
TspGWI ACGGA 2 cut(s) 338, 2341
TspRI CASTG 8 cut(s) 408, 610, 909, 1663, 2152, 2289, 2442, 2480
VpaK11BI GGWCC 6 cut(s) 538, 563, 887, 1484, 1813, 1838
XapI RAATTY 3 cut(s) 1865, 1916, 2345
XbaI TCTAGA 1 cut(s) 640
XceI RCATGY 8 cut(s) 766, 801, 1926, 1939, 1949, 2042, 2263, 2482
XmnI GAANNNNTTC 1 cut(s) 1638
XspI CTAG 4 cut(s) 641, 848, 936, 2264
ZraI GACGTC 1 cut(s) 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.