Prupe.3G212600_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0013365
Physical Location & Seq
Forward (+)
21679619 .. 21684905
5287 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G212600.3

Sequence Viewer

Length: 1758 bp
ATGGCGTTGCTTCACGTTCAACTCATTAATGGGTTTTTTCAGGGCCCAAAGCAGAGCCCACTGTCTCAGAGAAGAGCAAGAGCTGGCAGATACCTCTGCTTGCAAACACAGGCCAATCCCTCAAGAACCCAGAGGATAATGGAGAGTTTATCAGTGAGTGGGGAAGTTGGTGGTGCTGGCGGGGCATACTCATATAGTGCCTTGAAGAGGTTGGACCAACTTTGGTCTAGTATTTGTTCTGCTCAAACAGTTGTGGAGGAACCAAAGCAAGTGGTTTCAAGTGTTCCTGGTTTTTTTAGCAATTCTGATCTGGCTGACAAAGCAGTAGATACATTTGATGTGTTAATTTGTGGTGGAACTCTGGGAATCTTCATAGCTACAGCCTTGTGCGCAAAAGGTCTTCGAGTAGGCATTGTTGAGAGAAATGTGCTCAAGGGGAGGGAACAAGAATGGAATATCTCACGGAAAGAGCTCTTGGAACTTGTAGAAATCGGAGTTCTGGTAGAAGATGACATTGAACTAGTCACTGCAGCTAAATTCAATCCTAACAGATGCGGCTTTGAGGGCAAGGGTGATATCTGGGTTGAAGACATTCTTAATCTTGGTGTTTCACCAGCAAAGCTTATAGAGGTTGTGAAGAATCGTTTCATTACTCTGGGTGGAGTCATATTTGAAGGCAACAGTGTGTCCAGCATTTCCATTTATGAAGATGCGGCTGTCTTACAACTCAATGAGGGAAACATTTTGACATCTCGCCTCATCATTGATGCAATGGGGAATTTCTCTCCCATTGTAAAACAGATAAGATCCGGAAGGAAACCAGATGGTGTTTGCCTTGTTGTTGGATCCTGTGCTCGTGGATTTAAGGATAACTCTACAAGTGATGTTATATATACTAGTTCATTGGTAAAGAAGGTTGGGGCCTCAAAAGCTCAATTGTTTTGGGAGGCATTTCCAGCTGGTTCAGGTCCTGCAGATCGTACAACTTATATGTTCACTTATCTTGCTCCTCAACCCCAATCGCCGAAATTGGAAGAATTGTTAGAAGAGTATTGGAAACTGATGCCAGAATATCAGGGGGTCTCTCTTGATGACTTGGAGATACAGAGGGTTCTATATGGCATTTTCCCTACATATTGTGACAGCCCGCTGCCGGCAGCTTTTAATCGTGTTTTACAGTTTGGTGATGCTAGTGGAATACAATCACCTGTTTCATTTGGTGGTTTCGGAAGCTTGACTAGGCACCTCAAGAGACTGTCAACTGGAATATATGAAGCAATGAGCAACAACCTTCTTGATTCGTACAGCTTGTCCCTGCTGAATCCTTACATGCCCAACTTAAGTGCTTCATGGTTGTTTCAAAGAGCAATGTCAGCAAAGCAACAGTCTAATGTGTCACCAGATTTTATTAATGAGCTTCTTTATGCGAATTTCCAAAGTATGCAGAGGCTCGGCGATCCAGTGCTAAGACCATTTCTTCAGGATGTTGTGCAGTTTGGACCTCTTGCCAAGACATTAGGCCTTGTCATGTTAACTAAACCTCAAATTATTCCATCAATTTTCAAGCAGGTTGGAATTCCTGTGCTTCTTGACTGGTCTGTACATTTTTTCATGCTGGGATACTATACGTTTCTCTCATCTTTTGCTGACCCTGTAGTAAGGCCTTTCTTAAGCACACTTCCATCCAAGGAGAAGTATGAGTGGAAGCGACGTCTTGAGGCTTGGAAATATGGCGCTGGCTTAGATTATAAGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lycopene_cycl

Protein Analysis

586

Amino Acids

64.66

Weight (kDa)

7.48

Isoelectric Point (pI)

47.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32640 AT2G32640
fragaria_vesca FvH4_6g42610 FvH4_6g42610
malus_domestica MD09G1112100.v1.1
prunus_persica Prupe.3G212600_v2.0.a1 Prupe.3G212600_v2.0.a1 Prupe.3G212600_v2.0.a1
pyrus_communis pycom09g03660
rosa_chinensis RchiOBHm_Chr2g0158461
rosa_laevigata RLG00000021090
rosa_multiflora Rmu_sc0004855.1_g000003
rosa_roxburghii Rroxscaffold_2G00091350
rosa_rugosa Rorug02G0469600
rosa_samantha Rh2AG535100 Rh2BG548500 Rh2CG518900
rosa_wichuraiana Rw2G044320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1749
AatII GACGTC 1 cut(s) 1714
Acc16I TGCGCA 1 cut(s) 391
Acc36I ACCTGC 1 cut(s) 1558
AccB1I GGYRCC 1 cut(s) 1242
AccIII TCCGGA 1 cut(s) 809
AciI CCGC 4 cut(s) 180, 555, 713, 1148
AclWI GGATC 4 cut(s) 801, 840, 853, 1451
AcsI RAATTY 4 cut(s) 536, 778, 1429, 1575
AcuI CTGAAG 1 cut(s) 1463
AcyI GRCGYC 1 cut(s) 1711
AfaI GTAC 3 cut(s) 982, 1304, 1602
AfiI CCNNNNNNNGG 2 cut(s) 207, 1153
AflII CTTAAG 2 cut(s) 1339, 1669
AgsI TTSAA 9 cut(s) 20, 205, 279, 518, 541, 587, 674, 1361, 1564
AhlI ACTAGT 2 cut(s) 520, 896
AjnI CCWGG 1 cut(s) 286
AjuI GAANNNNNNNTTGG 2 cut(s) 458, 490
Alw21I GWGCWC 3 cut(s) 432, 474, 856
Alw26I GTCTC 3 cut(s) 69, 1087, 1246
AlwI GGATC 4 cut(s) 801, 840, 853, 1451
AlwNI CAGNNNCTG 1 cut(s) 971
Aor13HI TCCGGA 1 cut(s) 809
AoxI GGCC 5 cut(s) 43, 111, 921, 1519, 1661
ApaI GGGCCC 1 cut(s) 47
ApeKI GCWGC 3 cut(s) 530, 1150, 1157
ApoI RAATTY 4 cut(s) 536, 778, 1429, 1575
ArsI GACNNNNNNTTYG 2 cut(s) 1370, 1402
AseI ATTAAT 2 cut(s) 27, 1410
Asp700I GAANNNNTTC 2 cut(s) 591, 644
AspLEI GCGC 2 cut(s) 392, 1736
AspS9I GGNCC 6 cut(s) 43, 44, 214, 921, 968, 1499
AsuHPI GGTGA 5 cut(s) 584, 603, 1196, 1197, 1389
AvaII GGWCC 3 cut(s) 214, 968, 1499
BaeGI GKGCMC 1 cut(s) 47
BamHI GGATCC 1 cut(s) 845
BanI GGYRCC 1 cut(s) 1242
BanII GRGCYC 3 cut(s) 47, 59, 474
BauI CACGAG 1 cut(s) 855
BbsI GAAGAC 2 cut(s) 392, 594
Bbv12I GWGCWC 3 cut(s) 432, 474, 856
BbvI GCAGC 3 cut(s) 542, 1137, 1169
BccI CCATC 3 cut(s) 818, 1561, 1690
BciT130I CCWGG 1 cut(s) 288
BciVI GTATCC 1 cut(s) 1613
BcoDI GTCTC 3 cut(s) 69, 1087, 1246
BcuI ACTAGT 2 cut(s) 520, 896
BfaI CTAG 5 cut(s) 228, 521, 897, 1191, 1239
BfmI CTRYAG 4 cut(s) 378, 528, 972, 1653
BfoI RGCGCY 1 cut(s) 1737
BfrI CTTAAG 2 cut(s) 1339, 1669
BfuAI ACCTGC 1 cut(s) 1558
BfuI GTATCC 1 cut(s) 1613
BisI GCNGC 5 cut(s) 531, 556, 714, 1151, 1158
BlsI GCNGC 5 cut(s) 532, 557, 715, 1152, 1159
Bme1390I CCNGG 1 cut(s) 288
Bme18I GGWCC 3 cut(s) 214, 968, 1499
BmgT120I GGNCC 6 cut(s) 43, 44, 214, 921, 968, 1499
BmiI GGNNCC 5 cut(s) 45, 261, 847, 922, 1244
BmrFI CCNGG 1 cut(s) 288
BmsI GCATC 5 cut(s) 542, 700, 757, 1053, 1177
BpiI GAAGAC 2 cut(s) 392, 594
BpuEI CTTGAG 4 cut(s) 106, 416, 1232, 1736
BsaHI GRCGYC 1 cut(s) 1711
BsaI GGTCTC 1 cut(s) 1087
BsaJI CCNNGG 1 cut(s) 1686
BsaWI WCCGGW 1 cut(s) 809
BsaXI ACNNNNNCTCC 2 cut(s) 486, 516
Bsc4I CCNNNNNNNGG 2 cut(s) 207, 1153
Bse118I RCCGGY 1 cut(s) 1153
Bse1I ACTGG 3 cut(s) 1267, 1460, 1598
Bse3DI GCAATG 3 cut(s) 777, 1284, 1374
BseAI TCCGGA 1 cut(s) 809
BseBI CCWGG 1 cut(s) 288
BseDI CCNNGG 1 cut(s) 1686
BseGI GGATG 2 cut(s) 1489, 1682
BseLI CCNNNNNNNGG 2 cut(s) 207, 1153
BseMI GCAATG 3 cut(s) 777, 1284, 1374
BseMII CTCAG 1 cut(s) 80
BseNI ACTGG 3 cut(s) 1267, 1460, 1598
BseRI GAGGAG 1 cut(s) 999
BseSI GKGCMC 1 cut(s) 47
BseXI GCAGC 3 cut(s) 542, 1137, 1169
BseYI CCCAGC 1 cut(s) 1615
BsgI GTGCAG 1 cut(s) 1511
BshFI GGCC 5 cut(s) 45, 113, 923, 1521, 1663
BshNI GGYRCC 1 cut(s) 1242
BsiHKAI GWGCWC 3 cut(s) 432, 474, 856
BsiSI CCGG 2 cut(s) 810, 1154
BslFI GGGAC 1 cut(s) 1297
BslI CCNNNNNNNGG 2 cut(s) 207, 1153
BsmAI GTCTC 3 cut(s) 69, 1087, 1246
BsmFI GGGAC 1 cut(s) 1297
BsnI GGCC 5 cut(s) 45, 113, 923, 1521, 1663
Bso31I GGTCTC 1 cut(s) 1087
Bsp120I GGGCCC 1 cut(s) 43
Bsp1286I GDGCHC 5 cut(s) 47, 59, 432, 474, 856
Bsp13I TCCGGA 1 cut(s) 809
Bsp1407I TGTACA 1 cut(s) 1600
Bsp143I GATC 5 cut(s) 307, 806, 845, 976, 1456
BspACI CCGC 4 cut(s) 180, 555, 713, 1148
BspANI GGCC 5 cut(s) 45, 113, 923, 1521, 1663
BspCNI CTCAG 1 cut(s) 79
BspEI TCCGGA 1 cut(s) 809
BspHI TCATGA 1 cut(s) 1754
BspLI GGNNCC 5 cut(s) 45, 261, 847, 922, 1244
BspMAI CTGCAG 2 cut(s) 532, 976
BspMI ACCTGC 1 cut(s) 1558
BspPI GGATC 4 cut(s) 801, 840, 853, 1451
BspQI GCTCTTC 1 cut(s) 67
BspT107I GGYRCC 1 cut(s) 1242
BspTI CTTAAG 2 cut(s) 1339, 1669
BspTNI GGTCTC 1 cut(s) 1087
BsrDI GCAATG 3 cut(s) 777, 1284, 1374
BsrFI RCCGGY 1 cut(s) 1153
BsrGI TGTACA 1 cut(s) 1600
BsrI ACTGG 3 cut(s) 1267, 1460, 1598
BssAI RCCGGY 1 cut(s) 1153
BssECI CCNNGG 1 cut(s) 1686
BssMI GATC 5 cut(s) 307, 806, 845, 976, 1456
BssNI GRCGYC 1 cut(s) 1711
BssSI CACGAG 1 cut(s) 855
BssT1I CCWWGG 1 cut(s) 1686
Bst2BI CACGAG 1 cut(s) 855
Bst2UI CCWGG 1 cut(s) 288
Bst4CI ACNGT 6 cut(s) 63, 250, 683, 1179, 1257, 1386
Bst6I CTCTTC 3 cut(s) 67, 200, 1041
BstACI GRCGYC 1 cut(s) 1711
BstAFI CTTAAG 2 cut(s) 1339, 1669
BstAUI TGTACA 1 cut(s) 1600
BstC8I GCNNGC 6 cut(s) 85, 101, 178, 1148, 1155, 1738
BstDEI CTNAG 3 cut(s) 66, 1466, 1741
BstENI CCTNNNNNAGG 1 cut(s) 205
BstF5I GGATG 2 cut(s) 1489, 1682
BstH2I RGCGCY 1 cut(s) 1737
BstHHI GCGC 2 cut(s) 392, 1736
BstKTI GATC 5 cut(s) 310, 809, 848, 979, 1459
BstMAI GTCTC 3 cut(s) 69, 1087, 1246
BstMBI GATC 5 cut(s) 307, 806, 845, 976, 1456
BstMWI GCNNNNNNNGC 7 cut(s) 182, 320, 389, 564, 929, 956, 1373
BstNI CCWGG 1 cut(s) 288
BstNSI RCATGY 1 cut(s) 1333
BstSCI CCNGG 1 cut(s) 286
BstSFI CTRYAG 4 cut(s) 378, 528, 972, 1653
BstSLI GKGCMC 1 cut(s) 47
BstV1I GCAGC 3 cut(s) 542, 1137, 1169
BstV2I GAAGAC 2 cut(s) 392, 594
BstX2I RGATCY 2 cut(s) 806, 845
BstYI RGATCY 2 cut(s) 806, 845
BsuI GTATCC 1 cut(s) 1613
BsuRI GGCC 5 cut(s) 45, 113, 923, 1521, 1663
BtsCI GGATG 2 cut(s) 1489, 1682
BtsI GCAGTG 1 cut(s) 525
BtsIMutI CAGTG 5 cut(s) 59, 159, 525, 688, 1467
BveI ACCTGC 1 cut(s) 1558
Cac8I GCNNGC 6 cut(s) 85, 101, 178, 1148, 1155, 1738
CaiI CAGNNNCTG 1 cut(s) 971
CciI TCATGA 1 cut(s) 1754
CfoI GCGC 2 cut(s) 392, 1736
Cfr10I RCCGGY 1 cut(s) 1153
Cfr13I GGNCC 6 cut(s) 43, 44, 214, 921, 968, 1499
Csp6I GTAC 3 cut(s) 981, 1303, 1601
CspCI CAANNNNNGTGG 2 cut(s) 252, 287
CviAII CATG 5 cut(s) 1330, 1350, 1528, 1612, 1755
CviQI GTAC 3 cut(s) 981, 1303, 1601
DdeI CTNAG 3 cut(s) 66, 1466, 1741
DpnI GATC 5 cut(s) 309, 808, 847, 978, 1458
DpnII GATC 5 cut(s) 307, 806, 845, 976, 1456
Eam1104I CTCTTC 3 cut(s) 67, 200, 1041
EarI CTCTTC 3 cut(s) 67, 200, 1041
Ecl136II GAGCTC 1 cut(s) 472
Eco130I CCWWGG 1 cut(s) 1686
Eco147I AGGCCT 2 cut(s) 1521, 1663
Eco24I GRGCYC 3 cut(s) 47, 59, 474
Eco31I GGTCTC 1 cut(s) 1087
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 3 cut(s) 214, 968, 1499
Eco53kI GAGCTC 1 cut(s) 472
Eco57I CTGAAG 1 cut(s) 1463
EcoICRI GAGCTC 1 cut(s) 472
EcoNI CCTNNNNNAGG 1 cut(s) 205
EcoO109I RGGNCCY 3 cut(s) 43, 921, 968
EcoRI GAATTC 1 cut(s) 1575
EcoRII CCWGG 1 cut(s) 286
EcoRV GATATC 1 cut(s) 577
EcoT14I CCWWGG 1 cut(s) 1686
EcoT38I GRGCYC 3 cut(s) 47, 59, 474
ErhI CCWWGG 1 cut(s) 1686
FaeI CATG 5 cut(s) 1333, 1353, 1531, 1615, 1758
FalI AAGNNNNNCTT 2 cut(s) 579, 611
FaqI GGGAC 1 cut(s) 1297
FatI CATG 5 cut(s) 1329, 1349, 1527, 1611, 1754
FauI CCCGC 2 cut(s) 173, 1155
Fnu4HI GCNGC 5 cut(s) 531, 556, 714, 1151, 1158
FokI GGATG 2 cut(s) 1496, 1669
FriOI GRGCYC 3 cut(s) 47, 59, 474
Fsp4HI GCNGC 5 cut(s) 531, 556, 714, 1151, 1158
FspBI CTAG 5 cut(s) 228, 521, 897, 1191, 1239
FspI TGCGCA 1 cut(s) 391
GlaI GCGC 2 cut(s) 391, 1735
GluI GCNGC 5 cut(s) 531, 556, 714, 1151, 1158
GsaI CCCAGC 1 cut(s) 1619
HaeII RGCGCY 1 cut(s) 1737
HaeIII GGCC 5 cut(s) 45, 113, 923, 1521, 1663
HapII CCGG 2 cut(s) 810, 1154
HhaI GCGC 2 cut(s) 392, 1736
Hin1I GRCGYC 1 cut(s) 1711
Hin1II CATG 5 cut(s) 1333, 1353, 1531, 1615, 1758
Hin6I GCGC 2 cut(s) 390, 1734
HinP1I GCGC 2 cut(s) 390, 1734
HincII GTYRAC 2 cut(s) 1260, 1533
HindII GTYRAC 2 cut(s) 1260, 1533
HindIII AAGCTT 2 cut(s) 620, 1231
HinfI GANTC 5 cut(s) 366, 640, 663, 1298, 1321
HpaI GTTAAC 1 cut(s) 1533
HpaII CCGG 2 cut(s) 810, 1154
HphI GGTGA 5 cut(s) 584, 603, 1196, 1197, 1389
Hpy166II GTNNAC 3 cut(s) 996, 1260, 1533
Hpy188I TCNGA 4 cut(s) 69, 307, 494, 1229
Hpy188III TCNNGA 9 cut(s) 123, 810, 1088, 1249, 1295, 1481, 1589, 1715, 1755
Hpy8I GTNNAC 3 cut(s) 996, 1260, 1533
Hpy99I CGWCG 1 cut(s) 1713
HpyAV CCTTC 4 cut(s) 668, 807, 907, 1301
HpyCH4III ACNGT 6 cut(s) 63, 250, 683, 1179, 1257, 1386
HpyCH4IV ACGT 3 cut(s) 15, 1628, 1711
HpyCH4V TGCA 6 cut(s) 103, 530, 770, 974, 1444, 1492
HpyF10VI GCNNNNNNNGC 7 cut(s) 182, 320, 389, 564, 929, 956, 1373
HpyF3I CTNAG 3 cut(s) 66, 1466, 1741
HpySE526I ACGT 3 cut(s) 15, 1628, 1711
Hsp92I GRCGYC 1 cut(s) 1711
Hsp92II CATG 5 cut(s) 1333, 1353, 1531, 1615, 1758
HspAI GCGC 2 cut(s) 390, 1734
Kpn2I TCCGGA 1 cut(s) 809
KroI GCCGGC 1 cut(s) 1153
KroNI GCCGGC 1 cut(s) 1155
KspAI GTTAAC 1 cut(s) 1533
Kzo9I GATC 5 cut(s) 307, 806, 845, 976, 1456
LguI GCTCTTC 1 cut(s) 67
LmnI GCTCC 1 cut(s) 1012
Lsp1109I GCAGC 3 cut(s) 542, 1137, 1169
LweI GCATC 5 cut(s) 542, 700, 757, 1053, 1177
MaeI CTAG 5 cut(s) 228, 521, 897, 1191, 1239
MaeII ACGT 3 cut(s) 15, 1628, 1711
MaeIII GTNAC 3 cut(s) 523, 1139, 1395
MalI GATC 5 cut(s) 309, 808, 847, 978, 1458
MboI GATC 5 cut(s) 307, 806, 845, 976, 1456
MfeI CAATTG 1 cut(s) 935
MflI RGATCY 2 cut(s) 806, 845
MhlI GDGCHC 5 cut(s) 47, 59, 432, 474, 856
MlyI GAGTC 1 cut(s) 672
MmeI TCCRAC 3 cut(s) 192, 823, 1552
MroI TCCGGA 1 cut(s) 809
MroNI GCCGGC 1 cut(s) 1153
MroXI GAANNNNTTC 2 cut(s) 591, 644
MseI TTAA 9 cut(s) 27, 344, 597, 864, 1164, 1340, 1410, 1532, 1670
MspA1I CMGCKG 2 cut(s) 959, 1150
MspCI CTTAAG 2 cut(s) 1339, 1669
MspI CCGG 2 cut(s) 810, 1154
MspR9I CCNGG 1 cut(s) 288
MunI CAATTG 1 cut(s) 935
MvaI CCWGG 1 cut(s) 288
MwoI GCNNNNNNNGC 7 cut(s) 182, 320, 389, 564, 929, 956, 1373
NaeI GCCGGC 1 cut(s) 1155
NdeII GATC 5 cut(s) 307, 806, 845, 976, 1456
NgoMIV GCCGGC 1 cut(s) 1153
NlaIII CATG 5 cut(s) 1333, 1353, 1531, 1615, 1758
NlaIV GGNNCC 5 cut(s) 45, 261, 847, 922, 1244
NmeAIII GCCGAG 1 cut(s) 1431
NmuCI GTSAC 3 cut(s) 523, 1139, 1395
NsbI TGCGCA 1 cut(s) 391
NspI RCATGY 1 cut(s) 1333
PagI TCATGA 1 cut(s) 1754
PceI AGGCCT 2 cut(s) 1521, 1663
PciSI GCTCTTC 1 cut(s) 67
PdiI GCCGGC 1 cut(s) 1155
PdmI GAANNNNTTC 2 cut(s) 591, 644
PfeI GAWTC 4 cut(s) 366, 640, 1298, 1321
PkrI GCNGC 5 cut(s) 532, 557, 715, 1152, 1159
PleI GAGTC 1 cut(s) 671
PpsI GAGTC 1 cut(s) 671
PpuMI RGGWCCY 1 cut(s) 968
PshBI ATTAAT 2 cut(s) 27, 1410
PsiI TTATAA 1 cut(s) 1749
Psp124BI GAGCTC 1 cut(s) 474
Psp5II RGGWCCY 1 cut(s) 968
Psp6I CCWGG 1 cut(s) 286
PspFI CCCAGC 1 cut(s) 1615
PspGI CCWGG 1 cut(s) 286
PspN4I GGNNCC 5 cut(s) 45, 261, 847, 922, 1244
PspOMI GGGCCC 1 cut(s) 43
PspPI GGNCC 6 cut(s) 43, 44, 214, 921, 968, 1499
PspPPI RGGWCCY 1 cut(s) 968
PstI CTGCAG 2 cut(s) 532, 976
PstNI CAGNNNCTG 1 cut(s) 971
PsuI RGATCY 2 cut(s) 806, 845
PvuII CAGCTG 1 cut(s) 959
RsaI GTAC 3 cut(s) 982, 1304, 1602
RsaNI GTAC 3 cut(s) 981, 1303, 1601
SacI GAGCTC 1 cut(s) 474
SapI GCTCTTC 1 cut(s) 67
SaqAI TTAA 9 cut(s) 27, 344, 597, 864, 1164, 1340, 1410, 1532, 1670
SatI GCNGC 5 cut(s) 531, 556, 714, 1151, 1158
Sau3AI GATC 5 cut(s) 307, 806, 845, 976, 1456
Sau96I GGNCC 6 cut(s) 43, 44, 214, 921, 968, 1499
SchI GAGTC 1 cut(s) 672
ScrFI CCNGG 1 cut(s) 288
SduI GDGCHC 5 cut(s) 47, 59, 432, 474, 856
SfaNI GCATC 5 cut(s) 542, 700, 757, 1053, 1177
SfcI CTRYAG 4 cut(s) 378, 528, 972, 1653
SinI GGWCC 3 cut(s) 214, 968, 1499
SmlI CTYRAG 6 cut(s) 121, 431, 1247, 1339, 1669, 1715
SmoI CTYRAG 6 cut(s) 121, 431, 1247, 1339, 1669, 1715
SpeI ACTAGT 2 cut(s) 520, 896
SseBI AGGCCT 2 cut(s) 1521, 1663
SsiI CCGC 4 cut(s) 180, 555, 713, 1148
SspMI CTAG 5 cut(s) 228, 521, 897, 1191, 1239
SstI GAGCTC 1 cut(s) 474
StuI AGGCCT 2 cut(s) 1521, 1663
StyD4I CCNGG 1 cut(s) 286
StyI CCWWGG 1 cut(s) 1686
TaaI ACNGT 6 cut(s) 63, 250, 683, 1179, 1257, 1386
TaiI ACGT 3 cut(s) 18, 1631, 1714
TaqI TCGA 1 cut(s) 403
TatI WGTACW 1 cut(s) 1600
TauI GCSGC 2 cut(s) 558, 716
TfiI GAWTC 4 cut(s) 366, 640, 1298, 1321
Tru1I TTAA 9 cut(s) 27, 344, 597, 864, 1164, 1340, 1410, 1532, 1670
Tru9I TTAA 9 cut(s) 27, 344, 597, 864, 1164, 1340, 1410, 1532, 1670
TscAI CASTG 5 cut(s) 66, 159, 532, 688, 1467
TseFI GTSAC 3 cut(s) 523, 1139, 1395
TseI GCWGC 3 cut(s) 530, 1150, 1157
Tsp45I GTSAC 3 cut(s) 523, 1139, 1395
TspDTI ATGAA 8 cut(s) 361, 637, 720, 891, 1203, 1287, 1338, 1600
TspGWI ACGGA 1 cut(s) 478
TspRI CASTG 5 cut(s) 66, 159, 532, 688, 1467
Vha464I CTTAAG 2 cut(s) 1339, 1669
VpaK11BI GGWCC 3 cut(s) 214, 968, 1499
VspI ATTAAT 2 cut(s) 27, 1410
XagI CCTNNNNNAGG 1 cut(s) 205
XapI RAATTY 4 cut(s) 536, 778, 1429, 1575
XceI RCATGY 1 cut(s) 1333
XmnI GAANNNNTTC 2 cut(s) 591, 644
XspI CTAG 5 cut(s) 228, 521, 897, 1191, 1239
ZraI GACGTC 1 cut(s) 1712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.