Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0021903

Physical Location & Seq

Genomic Coordinates Forward (+)

636108 .. 638106

Gene Structure 1999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G013600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 594 bp

ATGAAAATAGCCAATGGGGATCGGGAGGTGTGCGTGGCCTCGCCTGCGGCCAAGGCTCCGTCGGTCGGAGATGAGAAAGAGAGGGAGGCAGACGCATTCGTGCCACCTCTAAACTTTGCGATGGTCGACAATGGCGTGTTTAGGTCCGGTTTCCCTCATTCTGCCAATTTCAGCTTTTTGAAATCCCTAGGCCTACGTTCCGTTATATACTTGTGCCCGGAGCCGTATCCGGAGGAGAACGAAGAGTTTTTGAAAGAAAATGGGATTAGGCTTTTCCAGTTTGGGATGGATGGCTCTCAGGAACATTTTGTGAAAATTCCGGAGCATGCAATTCGTGAAGCATTAAAAGTAGTCCTTGATGTAAGGAATCACCCGCTCCTGATTCATTGCAAACGAGGGAAGCACCGGACAGGCTGCCTTGTTGGATGCGTAAGAAGGTTGCAAAAATGGTGCCTGACCTCAATCTTCGACGAGTACCAGAGGTTTGCAGCTGCAAAAGCTAGAGCTTCAGATCAAAGGTTCATCGAATTGTTTGATATTTCTAGCGACGAACACTTGCCAATGTCATTTTCGTGTTCAAAAAGGATAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0031347 GO:0032101 GO:0035335 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0065007 GO:0071704 GO:0080134 GO:0140096 GO:1900150 GO:1900424 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Y_phosphatase2

Protein Analysis

198

Amino Acids

22.32

Weight (kDa)

7.63

Isoelectric Point (pI)

39.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0021903)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03960
malus_domestica	MD05G1354200.v1.1
prunus_persica	Prupe.4G013600_v2.0.a1
pyrus_communis	pycom10g27820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	450
AccBSI	CCGCTC	1 cut(s)	376
AccI	GTMKAC	1 cut(s)	126
AccIII	TCCGGA	2 cut(s)	229, 319
AciI	CCGC	2 cut(s)	47, 374
AclWI	GGATC	1 cut(s)	27
AcoI	YGGCCR	1 cut(s)	48
AcsI	RAATTY	1 cut(s)	315
AcuI	CTGAAG	1 cut(s)	492
AfaI	GTAC	1 cut(s)	476
AfiI	CCNNNNNNNGG	1 cut(s)	65
AgsI	TTSAA	3 cut(s)	181, 253, 579
AjuI	GAANNNNNNNTTGG	2 cut(s)	553, 585
AluBI	AGCT	4 cut(s)	174, 491, 500, 506
AluI	AGCT	4 cut(s)	174, 491, 500, 506
AlwI	GGATC	1 cut(s)	27
Aor13HI	TCCGGA	2 cut(s)	229, 319
AoxI	GGCC	3 cut(s)	36, 48, 190
ApeKI	GCWGC	3 cut(s)	414, 488, 491
ApoI	RAATTY	1 cut(s)	315
AspA2I	CCTAGG	1 cut(s)	187
AspS9I	GGNCC	1 cut(s)	144
AsuC2I	CCSGG	1 cut(s)	218
AsuHPI	GGTGA	1 cut(s)	362
AvaII	GGWCC	1 cut(s)	144
AvrII	CCTAGG	1 cut(s)	187
BaeGI	GKGCMC	1 cut(s)	218
BanI	GGYRCC	1 cut(s)	450
BbvI	GCAGC	3 cut(s)	401, 478, 500
BccI	CCATC	3 cut(s)	115, 280, 284
BceAI	ACGGC	1 cut(s)	208
BcgI	CGANNNNNNTGC	2 cut(s)	314, 348
BciVI	GTATCC	1 cut(s)	237
BcnI	CCSGG	1 cut(s)	218
BfaI	CTAG	3 cut(s)	188, 501, 543
BfuI	GTATCC	1 cut(s)	237
BisI	GCNGC	4 cut(s)	48, 415, 489, 492
BlnI	CCTAGG	1 cut(s)	187
BlsI	GCNGC	4 cut(s)	49, 416, 490, 493
Bme1390I	CCNGG	1 cut(s)	218
Bme18I	GGWCC	1 cut(s)	144
BmgT120I	GGNCC	1 cut(s)	144
BmiI	GGNNCC	3 cut(s)	57, 222, 452
BmrFI	CCNGG	1 cut(s)	218
BmsI	GCATC	1 cut(s)	416
BpuMI	CCSGG	1 cut(s)	218
BsaJI	CCNNGG	2 cut(s)	51, 187
BsaWI	WCCGGW	4 cut(s)	146, 229, 319, 405
Bsc4I	CCNNNNNNNGG	1 cut(s)	65
Bse1I	ACTGG	1 cut(s)	277
Bse3DI	GCAATG	1 cut(s)	385
BseAI	TCCGGA	2 cut(s)	229, 319
BseDI	CCNNGG	2 cut(s)	51, 187
BseGI	GGATG	3 cut(s)	291, 295, 431
BseLI	CCNNNNNNNGG	1 cut(s)	65
BseMI	GCAATG	1 cut(s)	385
BseMII	CTCAG	1 cut(s)	311
BseNI	ACTGG	1 cut(s)	277
BseRI	GAGGAG	1 cut(s)	248
BseSI	GKGCMC	1 cut(s)	218
BseXI	GCAGC	3 cut(s)	401, 478, 500
Bsh1285I	CGRYCG	1 cut(s)	66
BshFI	GGCC	3 cut(s)	38, 50, 192
BshNI	GGYRCC	1 cut(s)	450
BsiEI	CGRYCG	1 cut(s)	66
BsiSI	CCGG	5 cut(s)	147, 218, 230, 320, 406
BslI	CCNNNNNNNGG	1 cut(s)	65
BsmI	GAATGC	1 cut(s)	95
BsnI	GGCC	3 cut(s)	38, 50, 192
Bsp1286I	GDGCHC	1 cut(s)	218
Bsp13I	TCCGGA	2 cut(s)	229, 319
Bsp143I	GATC	2 cut(s)	19, 511
BspACI	CCGC	2 cut(s)	47, 374
BspANI	GGCC	3 cut(s)	38, 50, 192
BspCNI	CTCAG	1 cut(s)	310
BspEI	TCCGGA	2 cut(s)	229, 319
BspLI	GGNNCC	3 cut(s)	57, 222, 452
BspPI	GGATC	1 cut(s)	27
BspT107I	GGYRCC	1 cut(s)	450
BsrBI	CCGCTC	1 cut(s)	376
BsrDI	GCAATG	1 cut(s)	385
BsrI	ACTGG	1 cut(s)	277
BssECI	CCNNGG	2 cut(s)	51, 187
BssMI	GATC	2 cut(s)	19, 511
BssT1I	CCWWGG	2 cut(s)	51, 187
Bst6I	CTCTTC	1 cut(s)	237
BstC8I	GCNNGC	2 cut(s)	45, 327
BstDEI	CTNAG	1 cut(s)	297
BstF5I	GGATG	3 cut(s)	291, 295, 431
BstKTI	GATC	2 cut(s)	22, 514
BstMBI	GATC	2 cut(s)	19, 511
BstMCI	CGRYCG	1 cut(s)	66
BstMWI	GCNNNNNNNGC	3 cut(s)	44, 53, 497
BstNSI	RCATGY	1 cut(s)	329
BstSCI	CCNGG	1 cut(s)	216
BstSLI	GKGCMC	1 cut(s)	218
BstV1I	GCAGC	3 cut(s)	401, 478, 500
BsuI	GTATCC	1 cut(s)	237
BsuRI	GGCC	3 cut(s)	38, 50, 192
BtgZI	GCGATG	1 cut(s)	134
BtsCI	GGATG	3 cut(s)	291, 295, 431
Cac8I	GCNNGC	2 cut(s)	45, 327
Cfr13I	GGNCC	1 cut(s)	144
CseI	GACGC	1 cut(s)	101
Csp6I	GTAC	1 cut(s)	475
CviAII	CATG	1 cut(s)	326
CviQI	GTAC	1 cut(s)	475
DdeI	CTNAG	1 cut(s)	297
DpnI	GATC	2 cut(s)	21, 513
DpnII	GATC	2 cut(s)	19, 511
EaeI	YGGCCR	1 cut(s)	48
Eam1104I	CTCTTC	1 cut(s)	237
EarI	CTCTTC	1 cut(s)	237
Eco130I	CCWWGG	2 cut(s)	51, 187
Eco147I	AGGCCT	1 cut(s)	192
Eco47I	GGWCC	1 cut(s)	144
Eco57I	CTGAAG	1 cut(s)	492
EcoT14I	CCWWGG	2 cut(s)	51, 187
ErhI	CCWWGG	2 cut(s)	51, 187
FaeI	CATG	1 cut(s)	329
FaiI	YATR	3 cut(s)	206, 208, 327
FalI	AAGNNNNNCTT	2 cut(s)	339, 371
FatI	CATG	1 cut(s)	325
FauI	CCCGC	1 cut(s)	381
FblI	GTMKAC	1 cut(s)	126
Fnu4HI	GCNGC	4 cut(s)	48, 415, 489, 492
FokI	GGATG	3 cut(s)	298, 302, 438
Fsp4HI	GCNGC	4 cut(s)	48, 415, 489, 492
FspBI	CTAG	3 cut(s)	188, 501, 543
GluI	GCNGC	4 cut(s)	48, 415, 489, 492
HaeIII	GGCC	3 cut(s)	38, 50, 192
HapII	CCGG	5 cut(s)	147, 218, 230, 320, 406
HgaI	GACGC	1 cut(s)	101
Hin1II	CATG	1 cut(s)	329
HincII	GTYRAC	1 cut(s)	127
HindII	GTYRAC	1 cut(s)	127
HinfI	GANTC	2 cut(s)	367, 382
HpaII	CCGG	5 cut(s)	147, 218, 230, 320, 406
HphI	GGTGA	1 cut(s)	362
Hpy166II	GTNNAC	1 cut(s)	127
Hpy188I	TCNGA	2 cut(s)	68, 511
Hpy188III	TCNNGA	6 cut(s)	23, 230, 299, 320, 335, 379
Hpy8I	GTNNAC	1 cut(s)	127
Hpy99I	CGWCG	3 cut(s)	64, 473, 551
HpyAV	CCTTC	1 cut(s)	429
HpyCH4IV	ACGT	1 cut(s)	196
HpyCH4V	TGCA	5 cut(s)	329, 390, 442, 488, 494
HpyF10VI	GCNNNNNNNGC	3 cut(s)	44, 53, 497
HpyF3I	CTNAG	1 cut(s)	297
HpySE526I	ACGT	1 cut(s)	196
Hsp92II	CATG	1 cut(s)	329
Kpn2I	TCCGGA	2 cut(s)	229, 319
Kzo9I	GATC	2 cut(s)	19, 511
LmnI	GCTCC	4 cut(s)	61, 220, 322, 381
Lsp1109I	GCAGC	3 cut(s)	401, 478, 500
LweI	GCATC	1 cut(s)	416
MaeI	CTAG	3 cut(s)	188, 501, 543
MaeII	ACGT	1 cut(s)	196
MalI	GATC	2 cut(s)	21, 513
MbiI	CCGCTC	1 cut(s)	376
MboI	GATC	2 cut(s)	19, 511
MboII	GAAGA	2 cut(s)	254, 457
MhlI	GDGCHC	1 cut(s)	218
MluCI	AATT	4 cut(s)	166, 315, 330, 527
MmeI	TCCRAC	2 cut(s)	46, 403
MroI	TCCGGA	2 cut(s)	229, 319
MseI	TTAA	1 cut(s)	344
MslI	CAYNNNNRTG	1 cut(s)	571
MspA1I	CMGCKG	1 cut(s)	491
MspI	CCGG	5 cut(s)	147, 218, 230, 320, 406
MspR9I	CCNGG	1 cut(s)	218
Mva1269I	GAATGC	1 cut(s)	95
MwoI	GCNNNNNNNGC	3 cut(s)	44, 53, 497
NciI	CCSGG	1 cut(s)	218
NdeII	GATC	2 cut(s)	19, 511
NlaIII	CATG	1 cut(s)	329
NlaIV	GGNNCC	3 cut(s)	57, 222, 452
NspI	RCATGY	1 cut(s)	329
PaeI	GCATGC	1 cut(s)	329
PceI	AGGCCT	1 cut(s)	192
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PctI	GAATGC	1 cut(s)	95
PfeI	GAWTC	2 cut(s)	367, 382
PkrI	GCNGC	4 cut(s)	49, 416, 490, 493
PspN4I	GGNNCC	3 cut(s)	57, 222, 452
PspPI	GGNCC	1 cut(s)	144
PvuII	CAGCTG	1 cut(s)	491
RsaI	GTAC	1 cut(s)	476
RsaNI	GTAC	1 cut(s)	475
RseI	CAYNNNNRTG	1 cut(s)	571
SalI	GTCGAC	1 cut(s)	125
SaqAI	TTAA	1 cut(s)	344
SatI	GCNGC	4 cut(s)	48, 415, 489, 492
Sau3AI	GATC	2 cut(s)	19, 511
Sau96I	GGNCC	1 cut(s)	144
ScrFI	CCNGG	1 cut(s)	218
SduI	GDGCHC	1 cut(s)	218
SfaNI	GCATC	1 cut(s)	416
SinI	GGWCC	1 cut(s)	144
SmiMI	CAYNNNNRTG	1 cut(s)	571
SphI	GCATGC	1 cut(s)	329
Sse9I	AATT	4 cut(s)	166, 315, 330, 527
SseBI	AGGCCT	1 cut(s)	192
SsiI	CCGC	2 cut(s)	47, 374
SspMI	CTAG	3 cut(s)	188, 501, 543
StuI	AGGCCT	1 cut(s)	192
StyD4I	CCNGG	1 cut(s)	216
StyI	CCWWGG	2 cut(s)	51, 187
TaiI	ACGT	1 cut(s)	199
TaqI	TCGA	3 cut(s)	126, 468, 525
TaqII	GACCGA	1 cut(s)	52
TasI	AATT	4 cut(s)	166, 315, 330, 527
TauI	GCSGC	1 cut(s)	50
TfiI	GAWTC	2 cut(s)	367, 382
Tru1I	TTAA	1 cut(s)	344
Tru9I	TTAA	1 cut(s)	344
TseI	GCWGC	3 cut(s)	414, 488, 491
TspDTI	ATGAA	3 cut(s)	17, 374, 511
TspGWI	ACGGA	2 cut(s)	48, 190
VpaK11BI	GGWCC	1 cut(s)	144
XapI	RAATTY	1 cut(s)	315
XceI	RCATGY	1 cut(s)	329
XmaJI	CCTAGG	1 cut(s)	187
XmiI	GTMKAC	1 cut(s)	126
XspI	CTAG	3 cut(s)	188, 501, 543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.