Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0022477

Physical Location & Seq

Genomic Coordinates Reverse (-)

3735516 .. 3736215

Gene Structure 700 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G076600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 405 bp

ATGAAACTACAGTATGACGCGGAAGAACACCACCAATCGAACACAGTTCCTGCTGTAATTCACAAAAGAAGACGTCCACGGCATCTTCATTTTACTTCTTCAATACCAAGTCAATGCAATATACTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGCCCTGCAAGACTCTTAGGTGGAGGAGATTCTATGACCCTAGCCACAATTGGGTATATGGCTCCAGGAAGATCAGGATTTTGTGAGCAAGAGGGATTGCTTATCATCCATTATGTGAGATTAGCTCTAGCTCGTTCCGCAGAATTTCCAAAAGAGAGGATGCAAGATGTTGTTGTCACACTCAATAAAATCAAGATTAAGTTTTTGAATGACTGTGCTGGAGTGCAGCCTTTGTTTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04016 ko04064 ko04620 ko04621 ko04624 ko04626 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04016 map04064 map04620 map04621 map04624 map04626 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

135

Amino Acids

15.03

Weight (kDa)

7.81

Isoelectric Point (pI)

67.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0022477)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G076600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0059141 RchiOBHm_Chr7g0213291
rosa_roxburghii	Rroxscaffold_1G00040160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	76
AccII	CGCG	1 cut(s)	20
AciI	CCGC	2 cut(s)	20, 300
AcsI	RAATTY	1 cut(s)	305
AcyI	GRCGYC	1 cut(s)	73
AfiI	CCNNNNNNNGG	1 cut(s)	213
AflIII	ACRYGT	1 cut(s)	148
AgsI	TTSAA	2 cut(s)	102, 370
AjnI	CCWGG	1 cut(s)	226
AluBI	AGCT	2 cut(s)	287, 293
AluI	AGCT	2 cut(s)	287, 293
AlwNI	CAGNNNCTG	1 cut(s)	50
AoxI	GGCC	1 cut(s)	163
ApeKI	GCWGC	1 cut(s)	388
ApoI	RAATTY	1 cut(s)	305
AspS9I	GGNCC	1 cut(s)	164
BbsI	GAAGAC	1 cut(s)	76
BbvI	GCAGC	1 cut(s)	400
BceAI	ACGGC	1 cut(s)	95
BciT130I	CCWGG	1 cut(s)	228
BfaI	CTAG	4 cut(s)	128, 203, 290, 403
BfmI	CTRYAG	1 cut(s)	8
BisI	GCNGC	1 cut(s)	389
BlsI	GCNGC	1 cut(s)	390
Bme1390I	CCNGG	1 cut(s)	228
BmgT120I	GGNCC	1 cut(s)	164
BmiI	GGNNCC	1 cut(s)	225
BmrFI	CCNGG	1 cut(s)	228
BmsI	GCATC	2 cut(s)	91, 312
BpiI	GAAGAC	1 cut(s)	76
BplI	GAGNNNNNCTC	2 cut(s)	271, 303
BpmI	CTGGAG	2 cut(s)	210, 402
BsaHI	GRCGYC	1 cut(s)	73
BsaJI	CCNNGG	1 cut(s)	77
Bsc4I	CCNNNNNNNGG	1 cut(s)	213
BseBI	CCWGG	1 cut(s)	228
BseDI	CCNNGG	1 cut(s)	77
BseGI	GGATG	2 cut(s)	267, 327
BseLI	CCNNNNNNNGG	1 cut(s)	213
BseRI	GAGGAG	1 cut(s)	201
BseXI	GCAGC	1 cut(s)	400
Bsh1236I	CGCG	1 cut(s)	20
BshFI	GGCC	1 cut(s)	165
BslI	CCNNNNNNNGG	1 cut(s)	213
BsnI	GGCC	1 cut(s)	165
Bsp143I	GATC	1 cut(s)	233
BspACI	CCGC	2 cut(s)	20, 300
BspANI	GGCC	1 cut(s)	165
BspFNI	CGCG	1 cut(s)	20
BspLI	GGNNCC	1 cut(s)	225
BssECI	CCNNGG	1 cut(s)	77
BssMI	GATC	1 cut(s)	233
BssNI	GRCGYC	1 cut(s)	73
Bst2UI	CCWGG	1 cut(s)	228
Bst4CI	ACNGT	3 cut(s)	12, 46, 377
BstACI	GRCGYC	1 cut(s)	73
BstAPI	GCANNNNNTGC	1 cut(s)	152
BstDEI	CTNAG	1 cut(s)	178
BstDSI	CCRYGG	1 cut(s)	77
BstF5I	GGATG	2 cut(s)	267, 327
BstFNI	CGCG	1 cut(s)	20
BstKTI	GATC	1 cut(s)	236
BstMBI	GATC	1 cut(s)	233
BstMWI	GCNNNNNNNGC	2 cut(s)	152, 299
BstNI	CCWGG	1 cut(s)	228
BstNSI	RCATGY	1 cut(s)	152
BstSCI	CCNGG	1 cut(s)	226
BstSFI	CTRYAG	1 cut(s)	8
BstUI	CGCG	1 cut(s)	20
BstV1I	GCAGC	1 cut(s)	400
BstV2I	GAAGAC	1 cut(s)	76
BsuRI	GGCC	1 cut(s)	165
BtgI	CCRYGG	1 cut(s)	77
BtsCI	GGATG	2 cut(s)	267, 327
CaiI	CAGNNNCTG	1 cut(s)	50
Cfr13I	GGNCC	1 cut(s)	164
CseI	GACGC	1 cut(s)	26
CviAII	CATG	1 cut(s)	149
CviJI	RGCY	6 cut(s)	165, 206, 224, 287, 293, 391
CviKI_1	RGCY	6 cut(s)	165, 206, 224, 287, 293, 391
DdeI	CTNAG	1 cut(s)	178
DpnI	GATC	1 cut(s)	235
DpnII	GATC	1 cut(s)	233
EcoRII	CCWGG	1 cut(s)	226
FaeI	CATG	1 cut(s)	152
FaiI	YATR	8 cut(s)	15, 122, 140, 150, 197, 219, 221, 276
FatI	CATG	1 cut(s)	148
Fnu4HI	GCNGC	1 cut(s)	389
FokI	GGATG	2 cut(s)	254, 334
Fsp4HI	GCNGC	1 cut(s)	389
FspBI	CTAG	4 cut(s)	128, 203, 290, 403
GluI	GCNGC	1 cut(s)	389
GsuI	CTGGAG	2 cut(s)	210, 402
HaeIII	GGCC	1 cut(s)	165
HgaI	GACGC	1 cut(s)	26
Hin1I	GRCGYC	1 cut(s)	73
Hin1II	CATG	1 cut(s)	152
HinfI	GANTC	2 cut(s)	174, 191
Hpy166II	GTNNAC	1 cut(s)	77
Hpy188III	TCNNGA	2 cut(s)	237, 355
Hpy8I	GTNNAC	1 cut(s)	77
HpyCH4III	ACNGT	3 cut(s)	12, 46, 377
HpyCH4IV	ACGT	1 cut(s)	73
HpyCH4V	TGCA	5 cut(s)	117, 146, 170, 325, 388
HpyF10VI	GCNNNNNNNGC	2 cut(s)	152, 299
HpyF3I	CTNAG	1 cut(s)	178
HpySE526I	ACGT	1 cut(s)	73
Hsp92I	GRCGYC	1 cut(s)	73
Hsp92II	CATG	1 cut(s)	152
Kzo9I	GATC	1 cut(s)	233
LmnI	GCTCC	1 cut(s)	229
LpnPI	CCDG	6 cut(s)	63, 180, 213, 222, 240, 366
Lsp1109I	GCAGC	1 cut(s)	400
LweI	GCATC	2 cut(s)	91, 312
MaeI	CTAG	4 cut(s)	128, 203, 290, 403
MaeII	ACGT	1 cut(s)	73
MaeIII	GTNAC	1 cut(s)	337
MalI	GATC	1 cut(s)	235
MboI	GATC	1 cut(s)	233
MboII	GAAGA	5 cut(s)	35, 77, 81, 90, 243
MfeI	CAATTG	1 cut(s)	210
MluCI	AATT	3 cut(s)	57, 210, 305
MlyI	GAGTC	1 cut(s)	168
MnlI	CCTC	3 cut(s)	179, 247, 312
MseI	TTAA	1 cut(s)	360
MspR9I	CCNGG	1 cut(s)	228
MunI	CAATTG	1 cut(s)	210
MvaI	CCWGG	1 cut(s)	228
MvnI	CGCG	1 cut(s)	20
MwoI	GCNNNNNNNGC	2 cut(s)	152, 299
NdeII	GATC	1 cut(s)	233
NlaIII	CATG	1 cut(s)	152
NlaIV	GGNNCC	1 cut(s)	225
NmuCI	GTSAC	1 cut(s)	337
NspI	RCATGY	1 cut(s)	152
PciI	ACATGT	1 cut(s)	148
PfeI	GAWTC	1 cut(s)	191
PfoI	TCCNGGA	1 cut(s)	226
PkrI	GCNGC	1 cut(s)	390
PleI	GAGTC	1 cut(s)	168
PpsI	GAGTC	1 cut(s)	168
PscI	ACATGT	1 cut(s)	148
Psp6I	CCWGG	1 cut(s)	226
PspGI	CCWGG	1 cut(s)	226
PspN4I	GGNNCC	1 cut(s)	225
PspPI	GGNCC	1 cut(s)	164
PstNI	CAGNNNCTG	1 cut(s)	50
SaqAI	TTAA	1 cut(s)	360
SatI	GCNGC	1 cut(s)	389
Sau3AI	GATC	1 cut(s)	233
Sau96I	GGNCC	1 cut(s)	164
SchI	GAGTC	1 cut(s)	168
ScrFI	CCNGG	1 cut(s)	228
SetI	ASST	4 cut(s)	76, 184, 289, 295
SfaNI	GCATC	2 cut(s)	91, 312
SfcI	CTRYAG	1 cut(s)	8
Sse9I	AATT	3 cut(s)	57, 210, 305
SsiI	CCGC	2 cut(s)	20, 300
SspMI	CTAG	4 cut(s)	128, 203, 290, 403
StyD4I	CCNGG	1 cut(s)	226
TaaI	ACNGT	3 cut(s)	12, 46, 377
TaiI	ACGT	1 cut(s)	76
TaqI	TCGA	1 cut(s)	38
TasI	AATT	3 cut(s)	57, 210, 305
TfiI	GAWTC	1 cut(s)	191
Tru1I	TTAA	1 cut(s)	360
Tru9I	TTAA	1 cut(s)	360
TseFI	GTSAC	1 cut(s)	337
TseI	GCWGC	1 cut(s)	388
Tsp45I	GTSAC	1 cut(s)	337
TspDTI	ATGAA	2 cut(s)	17, 77
XapI	RAATTY	1 cut(s)	305
XceI	RCATGY	1 cut(s)	152
XspI	CTAG	4 cut(s)	128, 203, 290, 403
ZraI	GACGTC	1 cut(s)	74

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.