Prupe.4G199900_v2.0.a1

stigma-specific Stig1 family protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
12390991 .. 12392083
1093 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G199900.1

Sequence Viewer

Length: 309 bp
ATGACGGTGGATTCCACGACCATTGAAAAATCGAATACACGACGCCGGTTCCTTGCCTCTCAGTCGTCTCCGGGTCGGGGTGGTGGTGGATGCGACCAACACCCTCTTGCTTGTAGAGAAACTGAAGGCAGCGCAGGGCCAGATTGCCACAACAAAAAATGTGTGGATATAAGGACAGACATATCCAACTGTGGTTCTTGTGGGAAGAGATGCAGTAGCTCAGAGATATGCTGCAACGCTCATTGTGTGAATCCAATGTCTCACAAATATATGCATTTAATTGGATGTGCTGCACAAATATGCCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

10.91

Weight (kDa)

8.29

Isoelectric Point (pI)

78.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020348)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 144
AcyI GRCGYC 1 cut(s) 43
AfiI CCNNNNNNNGG 1 cut(s) 77
AgsI TTSAA 1 cut(s) 26
AluBI AGCT 1 cut(s) 219
AluI AGCT 1 cut(s) 219
Alw26I GTCTC 2 cut(s) 72, 264
AoxI GGCC 1 cut(s) 137
ApeKI GCWGC 3 cut(s) 129, 231, 290
AspLEI GCGC 1 cut(s) 134
AspS9I GGNCC 1 cut(s) 137
AsuC2I CCSGG 1 cut(s) 72
BbvI GCAGC 3 cut(s) 141, 218, 277
BcnI CCSGG 1 cut(s) 72
BcoDI GTCTC 2 cut(s) 72, 264
BisI GCNGC 3 cut(s) 130, 232, 291
BlsI GCNGC 3 cut(s) 131, 233, 292
Bme1390I CCNGG 1 cut(s) 72
BmgT120I GGNCC 1 cut(s) 137
BmiI GGNNCC 1 cut(s) 50
BmrFI CCNGG 1 cut(s) 72
BmsI GCATC 2 cut(s) 80, 200
BpuMI CCSGG 1 cut(s) 72
BsaHI GRCGYC 1 cut(s) 43
Bsc4I CCNNNNNNNGG 1 cut(s) 77
Bse118I RCCGGY 1 cut(s) 45
BseGI GGATG 2 cut(s) 95, 290
BseLI CCNNNNNNNGG 1 cut(s) 77
BseMII CTCAG 2 cut(s) 74, 234
BseXI GCAGC 3 cut(s) 141, 218, 277
BsgI GTGCAG 1 cut(s) 276
BshFI GGCC 1 cut(s) 139
BsiSI CCGG 2 cut(s) 46, 71
BslI CCNNNNNNNGG 1 cut(s) 77
BsmAI GTCTC 2 cut(s) 72, 264
BsmBI CGTCTC 1 cut(s) 72
BsnI GGCC 1 cut(s) 139
BspANI GGCC 1 cut(s) 139
BspCNI CTCAG 2 cut(s) 73, 233
BspLI GGNNCC 1 cut(s) 50
BsrFI RCCGGY 1 cut(s) 45
BssAI RCCGGY 1 cut(s) 45
BssNI GRCGYC 1 cut(s) 43
Bst4CI ACNGT 2 cut(s) 7, 191
Bst6I CTCTTC 1 cut(s) 200
BstACI GRCGYC 1 cut(s) 43
BstDEI CTNAG 2 cut(s) 60, 220
BstF5I GGATG 2 cut(s) 95, 290
BstHHI GCGC 1 cut(s) 134
BstMAI GTCTC 2 cut(s) 72, 264
BstSCI CCNGG 1 cut(s) 70
BstV1I GCAGC 3 cut(s) 141, 218, 277
BsuRI GGCC 1 cut(s) 139
BtsCI GGATG 2 cut(s) 95, 290
CfoI GCGC 1 cut(s) 134
Cfr10I RCCGGY 1 cut(s) 45
Cfr13I GGNCC 1 cut(s) 137
CseI GACGC 1 cut(s) 51
CspCI CAANNNNNGTGG 2 cut(s) 4, 39
CviJI RGCY 2 cut(s) 139, 219
CviKI_1 RGCY 2 cut(s) 139, 219
DdeI CTNAG 2 cut(s) 60, 220
Eam1104I CTCTTC 1 cut(s) 200
EarI CTCTTC 1 cut(s) 200
Eco57I CTGAAG 1 cut(s) 144
EcoT22I ATGCAT 1 cut(s) 276
Esp3I CGTCTC 1 cut(s) 72
FaiI YATR 6 cut(s) 170, 182, 229, 270, 272, 301
Fnu4HI GCNGC 3 cut(s) 130, 232, 291
FokI GGATG 2 cut(s) 102, 297
Fsp4HI GCNGC 3 cut(s) 130, 232, 291
GlaI GCGC 1 cut(s) 133
GluI GCNGC 3 cut(s) 130, 232, 291
HaeIII GGCC 1 cut(s) 139
HapII CCGG 2 cut(s) 46, 71
HgaI GACGC 1 cut(s) 51
HhaI GCGC 1 cut(s) 134
Hin1I GRCGYC 1 cut(s) 43
Hin6I GCGC 1 cut(s) 132
HinP1I GCGC 1 cut(s) 132
HinfI GANTC 2 cut(s) 11, 250
HpaII CCGG 2 cut(s) 46, 71
Hpy188I TCNGA 1 cut(s) 223
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 1 cut(s) 119
HpyCH4III ACNGT 2 cut(s) 7, 191
HpyCH4V TGCA 4 cut(s) 213, 234, 274, 293
HpyF3I CTNAG 2 cut(s) 60, 220
Hsp92I GRCGYC 1 cut(s) 43
HspAI GCGC 1 cut(s) 132
LpnPI CCDG 4 cut(s) 59, 84, 120, 153
Lsp1109I GCAGC 3 cut(s) 141, 218, 277
LweI GCATC 2 cut(s) 80, 200
MboII GAAGA 1 cut(s) 217
MluCI AATT 1 cut(s) 279
MmeI TCCRAC 1 cut(s) 210
MnlI CCTC 2 cut(s) 67, 114
Mph1103I ATGCAT 1 cut(s) 276
MseI TTAA 1 cut(s) 278
MslI CAYNNNNRTG 1 cut(s) 298
MspI CCGG 2 cut(s) 46, 71
MspR9I CCNGG 1 cut(s) 72
NciI CCSGG 1 cut(s) 72
NlaIV GGNNCC 1 cut(s) 50
NsiI ATGCAT 1 cut(s) 276
PfeI GAWTC 2 cut(s) 11, 250
PkrI GCNGC 3 cut(s) 131, 233, 292
PspN4I GGNNCC 1 cut(s) 50
PspPI GGNCC 1 cut(s) 137
RseI CAYNNNNRTG 1 cut(s) 298
SaqAI TTAA 1 cut(s) 278
SatI GCNGC 3 cut(s) 130, 232, 291
Sau96I GGNCC 1 cut(s) 137
ScrFI CCNGG 1 cut(s) 72
SetI ASST 1 cut(s) 221
SfaNI GCATC 2 cut(s) 80, 200
SmiMI CAYNNNNRTG 1 cut(s) 298
Sse9I AATT 1 cut(s) 279
StyD4I CCNGG 1 cut(s) 70
TaaI ACNGT 2 cut(s) 7, 191
TaqI TCGA 1 cut(s) 32
TasI AATT 1 cut(s) 279
TfiI GAWTC 2 cut(s) 11, 250
Tru1I TTAA 1 cut(s) 278
Tru9I TTAA 1 cut(s) 278
TseI GCWGC 3 cut(s) 129, 231, 290
Zsp2I ATGCAT 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.