Prupe.4G238100_v2.0.a1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
15564447 .. 15565456
1010 bp
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UTR
Exon/CDS
Intron
Prupe.4G238100.1

Sequence Viewer

Length: 270 bp
ATGGAGCTTCAGTGGCTCCCTTCCTTACAGGTCTTGTTTACCTTCTTGCTCTTTCTGATTTTGGTGCTGAAAATAGGAAGAAATGCAAAACCAATTACTCTAATTCAAATCTACCCCAAAAGGCCATGGAAGCTACCATTCATAGGAAACATACACCAGCTTATTGGCTCTCTACCTCATCATGAACTGAGAGACTTGGCCAAGAGATATGGACCTCTTATGCACCTACAGCTTGGAGAAGTTTCCACCGTTGTAGTTTCAGTAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

10.25

Weight (kDa)

10.11

Isoelectric Point (pI)

54.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022475)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 198
AfiI CCNNNNNNNGG 1 cut(s) 143
AgsI TTSAA 1 cut(s) 107
AluBI AGCT 4 cut(s) 7, 133, 160, 232
AluI AGCT 4 cut(s) 7, 133, 160, 232
Alw26I GTCTC 1 cut(s) 186
AoxI GGCC 2 cut(s) 122, 198
AspS9I GGNCC 1 cut(s) 212
AvaII GGWCC 1 cut(s) 212
BalI TGGCCA 1 cut(s) 200
BcoDI GTCTC 1 cut(s) 186
BfmI CTRYAG 1 cut(s) 227
Bme18I GGWCC 1 cut(s) 212
BmgT120I GGNCC 1 cut(s) 212
BmiI GGNNCC 1 cut(s) 17
BsaJI CCNNGG 1 cut(s) 125
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 1 cut(s) 143
BseDI CCNNGG 1 cut(s) 125
BseLI CCNNNNNNNGG 1 cut(s) 143
BseMII CTCAG 1 cut(s) 179
BshFI GGCC 2 cut(s) 124, 200
BslI CCNNNNNNNGG 1 cut(s) 143
BsmAI GTCTC 1 cut(s) 186
BsnI GGCC 2 cut(s) 124, 200
Bsp19I CCATGG 1 cut(s) 125
BspANI GGCC 2 cut(s) 124, 200
BspCNI CTCAG 1 cut(s) 180
BspHI TCATGA 1 cut(s) 181
BspLI GGNNCC 1 cut(s) 17
BssECI CCNNGG 1 cut(s) 125
BssT1I CCWWGG 1 cut(s) 125
Bst4CI ACNGT 1 cut(s) 250
BstDEI CTNAG 1 cut(s) 188
BstDSI CCRYGG 1 cut(s) 125
BstMAI GTCTC 1 cut(s) 186
BstMWI GCNNNNNNNGC 3 cut(s) 13, 130, 229
BstSFI CTRYAG 1 cut(s) 227
BstXI CCANNNNNNTGG 1 cut(s) 164
BsuRI GGCC 2 cut(s) 124, 200
BtgI CCRYGG 1 cut(s) 125
BtsIMutI CAGTG 1 cut(s) 17
CciI TCATGA 1 cut(s) 181
Cfr13I GGNCC 1 cut(s) 212
CviAII CATG 2 cut(s) 126, 182
CviJI RGCY 8 cut(s) 7, 16, 124, 133, 160, 168, 200, 232
CviKI_1 RGCY 8 cut(s) 7, 16, 124, 133, 160, 168, 200, 232
DdeI CTNAG 1 cut(s) 188
EaeI YGGCCR 1 cut(s) 198
Eco130I CCWWGG 1 cut(s) 125
Eco47I GGWCC 1 cut(s) 212
EcoT14I CCWWGG 1 cut(s) 125
ErhI CCWWGG 1 cut(s) 125
FaeI CATG 2 cut(s) 129, 185
FaiI YATR 7 cut(s) 127, 143, 152, 183, 210, 221, 268
FatI CATG 2 cut(s) 125, 181
HaeIII GGCC 2 cut(s) 124, 200
Hin1II CATG 2 cut(s) 129, 185
Hpy166II GTNNAC 1 cut(s) 39
Hpy188I TCNGA 1 cut(s) 57
Hpy188III TCNNGA 1 cut(s) 182
Hpy8I GTNNAC 1 cut(s) 39
HpyAV CCTTC 2 cut(s) 30, 52
HpyCH4III ACNGT 1 cut(s) 250
HpyCH4V TGCA 2 cut(s) 86, 223
HpyF10VI GCNNNNNNNGC 3 cut(s) 13, 130, 229
HpyF3I CTNAG 1 cut(s) 188
Hsp92II CATG 2 cut(s) 129, 185
LmnI GCTCC 2 cut(s) 4, 21
LpnPI CCDG 2 cut(s) 14, 170
MaeIII GTNAC 1 cut(s) 262
MboII GAAGA 1 cut(s) 90
MlsI TGGCCA 1 cut(s) 200
MluCI AATT 2 cut(s) 93, 102
MluNI TGGCCA 1 cut(s) 200
MnlI CCTC 2 cut(s) 186, 225
Mox20I TGGCCA 1 cut(s) 200
MscI TGGCCA 1 cut(s) 200
Msp20I TGGCCA 1 cut(s) 200
MwoI GCNNNNNNNGC 3 cut(s) 13, 130, 229
NcoI CCATGG 1 cut(s) 125
NlaIII CATG 2 cut(s) 129, 185
NlaIV GGNNCC 1 cut(s) 17
PagI TCATGA 1 cut(s) 181
PspN4I GGNNCC 1 cut(s) 17
PspPI GGNCC 1 cut(s) 212
Sau96I GGNCC 1 cut(s) 212
SetI ASST 9 cut(s) 9, 33, 44, 135, 162, 178, 217, 228, 234
SfcI CTRYAG 1 cut(s) 227
SgeI CNNG 9 cut(s) 41, 46, 58, 138, 169, 194, 208, 214, 245
SinI GGWCC 1 cut(s) 212
Sse9I AATT 2 cut(s) 93, 102
StyI CCWWGG 1 cut(s) 125
TaaI ACNGT 1 cut(s) 250
TasI AATT 2 cut(s) 93, 102
TscAI CASTG 1 cut(s) 17
TspDTI ATGAA 2 cut(s) 130, 198
TspRI CASTG 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.