Prupe.4G238500_v2.0.a1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
15632031 .. 15632240
210 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G238500.1

Sequence Viewer

Length: 210 bp
ATGGAGATTCAACGCCCTTCCTTCCAAGCCCTGTTTGCCTTCGCTCTCTTTGTGATCATGGTACTGAAAATAGAGAAGATCAGACGGAAAACCAATTACTCTGCTTCAAATCTACCCCCAGGGCCATGGAAGCTACCCTTTATCGGAAACCTACACCAGCTCATCGGCTCTCTACAACATCATGGACTAAGAGACTTGGCCAAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

70

Amino Acids

7.91

Weight (kDa)

10.62

Isoelectric Point (pI)

41.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022475)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 198
AfaI GTAC 1 cut(s) 63
AfiI CCNNNNNNNGG 1 cut(s) 143
AgsI TTSAA 2 cut(s) 11, 108
AjnI CCWGG 1 cut(s) 118
AluBI AGCT 2 cut(s) 133, 160
AluI AGCT 2 cut(s) 133, 160
Alw26I GTCTC 1 cut(s) 186
AoxI GGCC 2 cut(s) 122, 198
AspS9I GGNCC 1 cut(s) 122
BalI TGGCCA 1 cut(s) 200
BciT130I CCWGG 1 cut(s) 120
BclI TGATCA 1 cut(s) 54
BcoDI GTCTC 1 cut(s) 186
Bme1390I CCNGG 1 cut(s) 120
BmgT120I GGNCC 1 cut(s) 122
BmrFI CCNGG 1 cut(s) 120
BsaJI CCNNGG 3 cut(s) 118, 119, 125
Bsc4I CCNNNNNNNGG 1 cut(s) 143
BseBI CCWGG 1 cut(s) 120
BseDI CCNNGG 3 cut(s) 118, 119, 125
BseLI CCNNNNNNNGG 1 cut(s) 143
BshFI GGCC 2 cut(s) 124, 200
BslI CCNNNNNNNGG 1 cut(s) 143
BsmAI GTCTC 1 cut(s) 186
BsnI GGCC 2 cut(s) 124, 200
Bsp143I GATC 2 cut(s) 54, 78
Bsp19I CCATGG 1 cut(s) 125
BspANI GGCC 2 cut(s) 124, 200
BssECI CCNNGG 3 cut(s) 118, 119, 125
BssMI GATC 2 cut(s) 54, 78
BssT1I CCWWGG 1 cut(s) 125
Bst2UI CCWGG 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 188
BstDSI CCRYGG 1 cut(s) 125
BstKTI GATC 2 cut(s) 57, 81
BstMAI GTCTC 1 cut(s) 186
BstMBI GATC 2 cut(s) 54, 78
BstMWI GCNNNNNNNGC 2 cut(s) 35, 130
BstNI CCWGG 1 cut(s) 120
BstSCI CCNGG 1 cut(s) 118
BstXI CCANNNNNNTGG 1 cut(s) 126
BsuRI GGCC 2 cut(s) 124, 200
BtgI CCRYGG 1 cut(s) 125
Cfr13I GGNCC 1 cut(s) 122
Csp6I GTAC 1 cut(s) 62
CviAII CATG 3 cut(s) 58, 126, 182
CviJI RGCY 6 cut(s) 29, 124, 133, 160, 168, 200
CviKI_1 RGCY 6 cut(s) 29, 124, 133, 160, 168, 200
CviQI GTAC 1 cut(s) 62
DdeI CTNAG 1 cut(s) 188
DpnI GATC 2 cut(s) 56, 80
DpnII GATC 2 cut(s) 54, 78
EaeI YGGCCR 1 cut(s) 198
Eco130I CCWWGG 1 cut(s) 125
EcoRII CCWGG 1 cut(s) 118
EcoT14I CCWWGG 1 cut(s) 125
ErhI CCWWGG 1 cut(s) 125
FaeI CATG 3 cut(s) 61, 129, 185
FaiI YATR 3 cut(s) 59, 127, 183
FalI AAGNNNNNCTT 2 cut(s) 122, 154
FatI CATG 3 cut(s) 57, 125, 181
FbaI TGATCA 1 cut(s) 54
HaeIII GGCC 2 cut(s) 124, 200
Hin1II CATG 3 cut(s) 61, 129, 185
HinfI GANTC 1 cut(s) 7
Hpy188I TCNGA 2 cut(s) 83, 146
HpyAV CCTTC 3 cut(s) 27, 31, 49
HpyF10VI GCNNNNNNNGC 2 cut(s) 35, 130
HpyF3I CTNAG 1 cut(s) 188
Hsp92II CATG 3 cut(s) 61, 129, 185
Ksp22I TGATCA 1 cut(s) 54
Kzo9I GATC 2 cut(s) 54, 78
LpnPI CCDG 4 cut(s) 44, 105, 132, 170
MalI GATC 2 cut(s) 56, 80
MboI GATC 2 cut(s) 54, 78
MboII GAAGA 1 cut(s) 88
MlsI TGGCCA 1 cut(s) 200
MluCI AATT 2 cut(s) 94, 205
MluNI TGGCCA 1 cut(s) 200
Mox20I TGGCCA 1 cut(s) 200
MscI TGGCCA 1 cut(s) 200
Msp20I TGGCCA 1 cut(s) 200
MspR9I CCNGG 1 cut(s) 120
MvaI CCWGG 1 cut(s) 120
MwoI GCNNNNNNNGC 2 cut(s) 35, 130
NcoI CCATGG 1 cut(s) 125
NdeII GATC 2 cut(s) 54, 78
NlaIII CATG 3 cut(s) 61, 129, 185
PasI CCCWGGG 1 cut(s) 119
PfeI GAWTC 1 cut(s) 7
Psp6I CCWGG 1 cut(s) 118
PspGI CCWGG 1 cut(s) 118
PspPI GGNCC 1 cut(s) 122
RsaI GTAC 1 cut(s) 63
RsaNI GTAC 1 cut(s) 62
Sau3AI GATC 2 cut(s) 54, 78
Sau96I GGNCC 1 cut(s) 122
ScrFI CCNGG 1 cut(s) 120
SetI ASST 3 cut(s) 135, 153, 162
SgeI CNNG 8 cut(s) 38, 43, 70, 131, 132, 138, 169, 194
Sse9I AATT 2 cut(s) 94, 205
StyD4I CCNGG 1 cut(s) 118
StyI CCWWGG 1 cut(s) 125
TasI AATT 2 cut(s) 94, 205
TfiI GAWTC 1 cut(s) 7
TspGWI ACGGA 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.