Prupe.5G056000_v2.0.a1

Olee1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
6045133 .. 6045854
722 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G056000.1

Sequence Viewer

Length: 210 bp
ATGTCGACAAAGTCTAGCATTACCGTCCTTGCCTTTGCCTTTTGTTTCTTGTCCCTCCTCAGTTTTGCTTACTCCAACACCACCGACGACAAAATCTACCTCACCGGCCTGGTCTACTGTGACAACTGCCAATTGAAGTCTATGACCGAGATGAGTAAGATGATTCCAGGTACAACGGTGCGATTGGAGTGTAGGGAGGGGGGAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

70

Amino Acids

7.63

Weight (kDa)

6.05

Isoelectric Point (pI)

31.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 5, 114
AfaI GTAC 1 cut(s) 172
AgsI TTSAA 1 cut(s) 136
AjnI CCWGG 2 cut(s) 108, 166
AoxI GGCC 1 cut(s) 106
AsuHPI GGTGA 1 cut(s) 94
BaeI ACNNNNGTAYC 2 cut(s) 162, 195
BciT130I CCWGG 2 cut(s) 110, 168
BfaI CTAG 1 cut(s) 15
Bme1390I CCNGG 2 cut(s) 110, 168
BmrFI CCNGG 2 cut(s) 110, 168
Bse118I RCCGGY 1 cut(s) 104
BseBI CCWGG 2 cut(s) 110, 168
BseMII CTCAG 1 cut(s) 73
BseRI GAGGAG 1 cut(s) 47
BshFI GGCC 1 cut(s) 108
BsiSI CCGG 1 cut(s) 105
BslFI GGGAC 1 cut(s) 37
BsmFI GGGAC 1 cut(s) 37
BsnI GGCC 1 cut(s) 108
BspANI GGCC 1 cut(s) 108
BspCNI CTCAG 1 cut(s) 72
BsrFI RCCGGY 1 cut(s) 104
BssAI RCCGGY 1 cut(s) 104
Bst2UI CCWGG 2 cut(s) 110, 168
Bst4CI ACNGT 3 cut(s) 25, 119, 178
BstDEI CTNAG 1 cut(s) 59
BstNI CCWGG 2 cut(s) 110, 168
BstSCI CCNGG 2 cut(s) 108, 166
BsuRI GGCC 1 cut(s) 108
Cfr10I RCCGGY 1 cut(s) 104
Csp6I GTAC 1 cut(s) 171
CviJI RGCY 1 cut(s) 108
CviKI_1 RGCY 1 cut(s) 108
CviQI GTAC 1 cut(s) 171
DdeI CTNAG 1 cut(s) 59
EcoRII CCWGG 2 cut(s) 108, 166
FaiI YATR 2 cut(s) 143, 208
FaqI GGGAC 1 cut(s) 37
FblI GTMKAC 2 cut(s) 5, 114
FspBI CTAG 1 cut(s) 15
HaeIII GGCC 1 cut(s) 108
HapII CCGG 1 cut(s) 105
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 1 cut(s) 163
HpaII CCGG 1 cut(s) 105
HphI GGTGA 1 cut(s) 94
Hpy166II GTNNAC 2 cut(s) 6, 115
Hpy8I GTNNAC 2 cut(s) 6, 115
Hpy99I CGWCG 1 cut(s) 89
HpyCH4III ACNGT 3 cut(s) 25, 119, 178
HpyF3I CTNAG 1 cut(s) 59
LpnPI CCDG 5 cut(s) 95, 118, 122, 153, 180
MaeI CTAG 1 cut(s) 15
MaeIII GTNAC 1 cut(s) 119
MfeI CAATTG 1 cut(s) 131
MluCI AATT 1 cut(s) 131
MmeI TCCRAC 1 cut(s) 99
MnlI CCTC 4 cut(s) 65, 68, 110, 190
MspI CCGG 1 cut(s) 105
MspR9I CCNGG 2 cut(s) 110, 168
MunI CAATTG 1 cut(s) 131
MvaI CCWGG 2 cut(s) 110, 168
NmuCI GTSAC 1 cut(s) 119
PfeI GAWTC 1 cut(s) 163
PflFI GACNNNGTC 1 cut(s) 10
Psp6I CCWGG 2 cut(s) 108, 166
PspGI CCWGG 2 cut(s) 108, 166
PsyI GACNNNGTC 1 cut(s) 10
RsaI GTAC 1 cut(s) 172
RsaNI GTAC 1 cut(s) 171
SalI GTCGAC 1 cut(s) 4
ScrFI CCNGG 2 cut(s) 110, 168
SetI ASST 2 cut(s) 102, 172
SgeI CNNG 9 cut(s) 27, 41, 61, 117, 121, 122, 160, 179, 180
Sse9I AATT 1 cut(s) 131
SspMI CTAG 1 cut(s) 15
StyD4I CCNGG 2 cut(s) 108, 166
TaaI ACNGT 3 cut(s) 25, 119, 178
TaqI TCGA 1 cut(s) 5
TaqII GACCGA 1 cut(s) 161
TasI AATT 1 cut(s) 131
TfiI GAWTC 1 cut(s) 163
TseFI GTSAC 1 cut(s) 119
Tsp45I GTSAC 1 cut(s) 119
Tth111I GACNNNGTC 1 cut(s) 10
XmiI GTMKAC 2 cut(s) 5, 114
XspI CTAG 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.