Prupe.5G066900_v2.0.a1

Calcium-binding protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
8137895 .. 8139326
1432 bp
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UTR
Exon/CDS
Intron
Prupe.5G066900.1

Sequence Viewer

Length: 240 bp
ATGTCTCACGAATTGAGTGATGATCAAGTCGAGAAGCTCAAGCAAGCCTTCAACAATTTTGACAAGGATGGCAATGGCACTGTCACTACCGATGAGCTGAGCAATGTAATGACCTCAATAGGGCAAAACCCATCCGAGGAAGAATTGGAAGAATTTATTCAACAGATGGGCGGTGATGATGGGAGGGTTCGTTTTGATCAATTCTTGAAATTCATGGCAAAATTCATGAACGCTCAGTGA

Protein Analysis

80

Amino Acids

9.01

Weight (kDa)

4.27

Isoelectric Point (pI)

30.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022315)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 171
AcsI RAATTY 3 cut(s) 152, 209, 221
AfiI CCNNNNNNNGG 2 cut(s) 120, 136
AgsI TTSAA 3 cut(s) 52, 161, 208
AluBI AGCT 2 cut(s) 37, 97
AluI AGCT 2 cut(s) 37, 97
Alw26I GTCTC 1 cut(s) 9
ApoI RAATTY 3 cut(s) 152, 209, 221
Asp700I GAANNNNTTC 1 cut(s) 156
AsuHPI GGTGA 1 cut(s) 185
BccI CCATC 4 cut(s) 62, 139, 160, 173
BclI TGATCA 2 cut(s) 22, 196
BcoDI GTCTC 1 cut(s) 9
BlpI GCTNAGC 1 cut(s) 98
Bpu1102I GCTNAGC 1 cut(s) 98
BpuEI CTTGAG 1 cut(s) 23
BsaJI CCNNGG 1 cut(s) 135
BsaXI ACNNNNNCTCC 2 cut(s) 175, 205
Bsc4I CCNNNNNNNGG 2 cut(s) 120, 136
Bse3DI GCAATG 2 cut(s) 79, 109
BseDI CCNNGG 1 cut(s) 135
BseGI GGATG 2 cut(s) 73, 131
BseLI CCNNNNNNNGG 2 cut(s) 120, 136
BseMI GCAATG 2 cut(s) 79, 109
BseMII CTCAG 1 cut(s) 89
BslI CCNNNNNNNGG 2 cut(s) 120, 136
BsmAI GTCTC 1 cut(s) 9
Bsp143I GATC 2 cut(s) 22, 196
Bsp1720I GCTNAGC 1 cut(s) 98
BspACI CCGC 1 cut(s) 171
BspCNI CTCAG 1 cut(s) 90
BspHI TCATGA 1 cut(s) 225
BsrDI GCAATG 2 cut(s) 79, 109
BssECI CCNNGG 1 cut(s) 135
BssMI GATC 2 cut(s) 22, 196
Bst4CI ACNGT 1 cut(s) 82
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 2 cut(s) 98, 234
BstF5I GGATG 2 cut(s) 73, 131
BstKTI GATC 2 cut(s) 25, 199
BstMAI GTCTC 1 cut(s) 9
BstMBI GATC 2 cut(s) 22, 196
BtsCI GGATG 2 cut(s) 73, 131
BtsIMutI CAGTG 1 cut(s) 78
Cac8I GCNNGC 1 cut(s) 45
CciI TCATGA 1 cut(s) 225
CviAII CATG 2 cut(s) 214, 226
CviJI RGCY 3 cut(s) 37, 47, 97
CviKI_1 RGCY 3 cut(s) 37, 47, 97
DdeI CTNAG 2 cut(s) 98, 234
DpnI GATC 2 cut(s) 24, 198
DpnII GATC 2 cut(s) 22, 196
FaeI CATG 2 cut(s) 217, 229
FaiI YATR 2 cut(s) 215, 227
FalI AAGNNNNNCTT 2 cut(s) 32, 64
FatI CATG 2 cut(s) 213, 225
FbaI TGATCA 2 cut(s) 22, 196
FokI GGATG 2 cut(s) 80, 118
Hin1II CATG 2 cut(s) 217, 229
HphI GGTGA 1 cut(s) 185
Hpy188I TCNGA 1 cut(s) 136
Hpy188III TCNNGA 4 cut(s) 8, 31, 205, 226
HpyAV CCTTC 1 cut(s) 58
HpyCH4III ACNGT 1 cut(s) 82
HpyF3I CTNAG 2 cut(s) 98, 234
Hsp92II CATG 2 cut(s) 217, 229
Ksp22I TGATCA 2 cut(s) 22, 196
Kzo9I GATC 2 cut(s) 22, 196
MaeIII GTNAC 1 cut(s) 82
MalI GATC 2 cut(s) 24, 198
MboI GATC 2 cut(s) 22, 196
MboII GAAGA 2 cut(s) 152, 161
MluCI AATT 7 cut(s) 11, 55, 143, 152, 200, 209, 221
MnlI CCTC 3 cut(s) 124, 130, 177
MroXI GAANNNNTTC 1 cut(s) 156
NdeII GATC 2 cut(s) 22, 196
NlaIII CATG 2 cut(s) 217, 229
NmuCI GTSAC 1 cut(s) 82
PagI TCATGA 1 cut(s) 225
PdmI GAANNNNTTC 1 cut(s) 156
Sau3AI GATC 2 cut(s) 22, 196
SetI ASST 3 cut(s) 39, 99, 116
SgeI CNNG 9 cut(s) 20, 38, 43, 52, 56, 76, 148, 217, 226
SmlI CTYRAG 1 cut(s) 38
SmoI CTYRAG 1 cut(s) 38
Sse9I AATT 7 cut(s) 11, 55, 143, 152, 200, 209, 221
SsiI CCGC 1 cut(s) 171
TaaI ACNGT 1 cut(s) 82
TaqI TCGA 1 cut(s) 30
TasI AATT 7 cut(s) 11, 55, 143, 152, 200, 209, 221
TscAI CASTG 1 cut(s) 85
TseFI GTSAC 1 cut(s) 82
Tsp45I GTSAC 1 cut(s) 82
TspDTI ATGAA 2 cut(s) 202, 214
TspRI CASTG 1 cut(s) 85
XapI RAATTY 3 cut(s) 152, 209, 221
XmnI GAANNNNTTC 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.