HIPL1 protein-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G74790 AT5G62630 |
| fragaria_vesca | FvH4_5g15850 FvH4_5g15850 FvH4_5g15850 FvH4_5g15850 |
| malus_domestica | MD06G1185200.v1.1 MD14G1191100.v1.1 |
| prunus_persica | Prupe.5G184000_v2.0.a1 Prupe.5G184000_v2.0.a1 Prupe.5G184000_v2.0.a1 Prupe.5G184000_v2.0.a1 |
| pyrus_communis | pycom06g16440 pycom06g16450 pycom14g15880 |
| rosa_chinensis | RchiOBHm_Chr7g0180251 |
| rosa_laevigata | RLG00000005280 |
| rosa_multiflora | Rmu_sc0011963.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00273020 |
| rosa_rugosa | Rorug06G0431800 |
| rosa_samantha | Rh7AG032100 Rh7BG032200 Rh7CG034000 Rh7DG032500 |
| rosa_wichuraiana | Rw7G002680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1471 |
| AccB1I | GGYRCC | 2 cut(s) | 136, 1754 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 534, 1207 |
| AccII | CGCG | 3 cut(s) | 723, 893, 1833 |
| AciI | CCGC | 3 cut(s) | 186, 721, 1683 |
| AcoI | YGGCCR | 3 cut(s) | 341, 901, 941 |
| AcsI | RAATTY | 3 cut(s) | 164, 379, 1398 |
| AcuI | CTGAAG | 4 cut(s) | 38, 792, 1665, 1783 |
| AdeI | CACNNNGTG | 1 cut(s) | 1583 |
| AfaI | GTAC | 6 cut(s) | 282, 1069, 1193, 1225, 1302, 1730 |
| AflIII | ACRYGT | 1 cut(s) | 1731 |
| AgeI | ACCGGT | 1 cut(s) | 1695 |
| AgsI | TTSAA | 4 cut(s) | 132, 457, 922, 996 |
| AjnI | CCWGG | 2 cut(s) | 943, 2020 |
| Alw21I | GWGCWC | 2 cut(s) | 1021, 2091 |
| Alw26I | GTCTC | 2 cut(s) | 1697, 1734 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1772 |
| Ama87I | CYCGRG | 1 cut(s) | 662 |
| AoxI | GGCC | 8 cut(s) | 341, 484, 901, 941, 1135, 1391, 1451, 1549 |
| ApaI | GGGCCC | 1 cut(s) | 1553 |
| ApeKI | GCWGC | 6 cut(s) | 85, 88, 192, 1431, 1851, 1869 |
| ApoI | RAATTY | 3 cut(s) | 164, 379, 1398 |
| AsiGI | ACCGGT | 1 cut(s) | 1695 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 227, 961 |
| AspLEI | GCGC | 4 cut(s) | 725, 895, 1431, 1472 |
| AspS9I | GGNCC | 6 cut(s) | 1135, 1178, 1549, 1550, 1777, 2024 |
| AsuC2I | CCSGG | 2 cut(s) | 340, 1862 |
| AsuHPI | GGTGA | 5 cut(s) | 323, 617, 1241, 1504, 2028 |
| AvaI | CYCGRG | 1 cut(s) | 662 |
| AvaII | GGWCC | 3 cut(s) | 1178, 1777, 2024 |
| BaeGI | GKGCMC | 3 cut(s) | 139, 339, 1553 |
| BalI | TGGCCA | 1 cut(s) | 943 |
| BanI | GGYRCC | 2 cut(s) | 136, 1754 |
| BanII | GRGCYC | 1 cut(s) | 1553 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1111, 1143 |
| Bbv12I | GWGCWC | 2 cut(s) | 1021, 2091 |
| BbvI | GCAGC | 6 cut(s) | 72, 75, 179, 1418, 1863, 1881 |
| BceAI | ACGGC | 1 cut(s) | 1956 |
| BciT130I | CCWGG | 2 cut(s) | 945, 2022 |
| BciVI | GTATCC | 1 cut(s) | 1625 |
| BcnI | CCSGG | 2 cut(s) | 340, 1862 |
| BcoDI | GTCTC | 2 cut(s) | 1697, 1734 |
| BfaI | CTAG | 8 cut(s) | 56, 579, 1449, 1883, 1934, 1968, 2040, 2105 |
| BfmI | CTRYAG | 2 cut(s) | 1432, 1605 |
| BfoI | RGCGCY | 1 cut(s) | 1432 |
| BfuI | GTATCC | 1 cut(s) | 1625 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1763 |
| BglII | AGATCT | 1 cut(s) | 30 |
| BisI | GCNGC | 7 cut(s) | 86, 89, 193, 1432, 1684, 1852, 1870 |
| BlsI | GCNGC | 7 cut(s) | 87, 90, 194, 1433, 1685, 1853, 1871 |
| BmcAI | AGTACT | 1 cut(s) | 282 |
| Bme1390I | CCNGG | 4 cut(s) | 340, 945, 1862, 2022 |
| Bme18I | GGWCC | 3 cut(s) | 1178, 1777, 2024 |
| BmeT110I | CYCGRG | 1 cut(s) | 662 |
| BmgT120I | GGNCC | 6 cut(s) | 1135, 1178, 1549, 1550, 1777, 2024 |
| BmiI | GGNNCC | 5 cut(s) | 138, 574, 1551, 1756, 1779 |
| BmrFI | CCNGG | 4 cut(s) | 340, 945, 1862, 2022 |
| BmrI | ACTGGG | 1 cut(s) | 382 |
| BmsI | GCATC | 3 cut(s) | 938, 1082, 1679 |
| BmuI | ACTGGG | 1 cut(s) | 382 |
| BpmI | CTGGAG | 2 cut(s) | 718, 1555 |
| BpuEI | CTTGAG | 1 cut(s) | 1789 |
| BpuMI | CCSGG | 2 cut(s) | 340, 1862 |
| BsaAI | YACGTR | 1 cut(s) | 1732 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1669 |
| BsaJI | CCNNGG | 6 cut(s) | 338, 1086, 1424, 1515, 1992, 2020 |
| BsaWI | WCCGGW | 2 cut(s) | 1180, 1695 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1973, 2003 |
| Bse118I | RCCGGY | 3 cut(s) | 903, 1679, 1695 |
| Bse1I | ACTGG | 5 cut(s) | 38, 344, 388, 735, 810 |
| Bse3DI | GCAATG | 2 cut(s) | 565, 798 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1669 |
| BseBI | CCWGG | 2 cut(s) | 945, 2022 |
| BseDI | CCNNGG | 6 cut(s) | 338, 1086, 1424, 1515, 1992, 2020 |
| BseJI | GATNNNNATC | 1 cut(s) | 1669 |
| BseMI | GCAATG | 2 cut(s) | 565, 798 |
| BseMII | CTCAG | 4 cut(s) | 140, 1386, 1692, 1764 |
| BseNI | ACTGG | 5 cut(s) | 38, 344, 388, 735, 810 |
| BseRI | GAGGAG | 2 cut(s) | 1557, 2108 |
| BseSI | GKGCMC | 3 cut(s) | 139, 339, 1553 |
| BseXI | GCAGC | 6 cut(s) | 72, 75, 179, 1418, 1863, 1881 |
| BseYI | CCCAGC | 1 cut(s) | 1077 |
| Bsh1236I | CGCG | 3 cut(s) | 723, 893, 1833 |
| BshFI | GGCC | 8 cut(s) | 343, 486, 903, 943, 1137, 1393, 1453, 1551 |
| BshNI | GGYRCC | 2 cut(s) | 136, 1754 |
| BshTI | ACCGGT | 1 cut(s) | 1695 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1021, 2091 |
| BsiHKCI | CYCGRG | 1 cut(s) | 662 |
| BsiSI | CCGG | 6 cut(s) | 340, 904, 1181, 1680, 1696, 1862 |
| BslFI | GGGAC | 3 cut(s) | 443, 798, 1844 |
| BsmAI | GTCTC | 2 cut(s) | 1697, 1734 |
| BsmFI | GGGAC | 3 cut(s) | 443, 798, 1844 |
| BsnI | GGCC | 8 cut(s) | 343, 486, 903, 943, 1137, 1393, 1453, 1551 |
| BsoBI | CYCGRG | 1 cut(s) | 662 |
| Bsp120I | GGGCCC | 1 cut(s) | 1549 |
| Bsp1286I | GDGCHC | 5 cut(s) | 139, 339, 1021, 1553, 2091 |
| BspACI | CCGC | 3 cut(s) | 186, 721, 1683 |
| BspANI | GGCC | 8 cut(s) | 343, 486, 903, 943, 1137, 1393, 1453, 1551 |
| BspCNI | CTCAG | 5 cut(s) | 141, 1385, 1693, 1765, 2133 |
| BspFNI | CGCG | 3 cut(s) | 723, 893, 1833 |
| BspLI | GGNNCC | 5 cut(s) | 138, 574, 1551, 1756, 1779 |
| BspMAI | CTGCAG | 1 cut(s) | 1436 |
| BspT107I | GGYRCC | 2 cut(s) | 136, 1754 |
| BsrDI | GCAATG | 2 cut(s) | 565, 798 |
| BsrFI | RCCGGY | 3 cut(s) | 903, 1679, 1695 |
| BsrI | ACTGG | 5 cut(s) | 38, 344, 388, 735, 810 |
| BssAI | RCCGGY | 3 cut(s) | 903, 1679, 1695 |
| BssECI | CCNNGG | 6 cut(s) | 338, 1086, 1424, 1515, 1992, 2020 |
| BssT1I | CCWWGG | 4 cut(s) | 1086, 1424, 1515, 1992 |
| Bst2UI | CCWGG | 2 cut(s) | 945, 2022 |
| Bst4CI | ACNGT | 6 cut(s) | 325, 370, 926, 1026, 1042, 1790 |
| Bst6I | CTCTTC | 2 cut(s) | 768, 1491 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1097 |
| BstBAI | YACGTR | 1 cut(s) | 1732 |
| BstC8I | GCNNGC | 4 cut(s) | 190, 1768, 1849, 1939 |
| BstDEI | CTNAG | 7 cut(s) | 149, 1304, 1372, 1415, 1701, 1773, 2120 |
| BstFNI | CGCG | 3 cut(s) | 723, 893, 1833 |
| BstH2I | RGCGCY | 1 cut(s) | 1432 |
| BstHHI | GCGC | 4 cut(s) | 725, 895, 1431, 1472 |
| BstMAI | GTCTC | 2 cut(s) | 1697, 1734 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 720, 1097, 1763, 1800, 1830 |
| BstNI | CCWGG | 2 cut(s) | 945, 2022 |
| BstNSI | RCATGY | 2 cut(s) | 438, 1720 |
| BstSCI | CCNGG | 4 cut(s) | 338, 943, 1860, 2020 |
| BstSFI | CTRYAG | 2 cut(s) | 1432, 1605 |
| BstSLI | GKGCMC | 3 cut(s) | 139, 339, 1553 |
| BstUI | CGCG | 3 cut(s) | 723, 893, 1833 |
| BstV1I | GCAGC | 6 cut(s) | 72, 75, 179, 1418, 1863, 1881 |
| BstX2I | RGATCY | 5 cut(s) | 30, 680, 823, 1378, 1486 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1401 |
| BstYI | RGATCY | 5 cut(s) | 30, 680, 823, 1378, 1486 |
| BsuI | GTATCC | 1 cut(s) | 1625 |
| BsuRI | GGCC | 8 cut(s) | 343, 486, 903, 943, 1137, 1393, 1453, 1551 |
| BtsI | GCAGTG | 2 cut(s) | 1948, 2004 |
| BtsIMutI | CAGTG | 6 cut(s) | 14, 45, 366, 1795, 1948, 2004 |
| Cac8I | GCNNGC | 4 cut(s) | 190, 1768, 1849, 1939 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1772 |
| CfoI | GCGC | 4 cut(s) | 725, 895, 1431, 1472 |
| Cfr10I | RCCGGY | 3 cut(s) | 903, 1679, 1695 |
| Cfr13I | GGNCC | 6 cut(s) | 1135, 1178, 1549, 1550, 1777, 2024 |
| CseI | GACGC | 1 cut(s) | 1839 |
| Csp6I | GTAC | 6 cut(s) | 281, 1068, 1192, 1224, 1301, 1729 |
| CspAI | ACCGGT | 1 cut(s) | 1695 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 636, 671 |
| CviQI | GTAC | 6 cut(s) | 281, 1068, 1192, 1224, 1301, 1729 |
| DdeI | CTNAG | 7 cut(s) | 149, 1304, 1372, 1415, 1701, 1773, 2120 |
| DraIII | CACNNNGTG | 1 cut(s) | 1583 |
| EaeI | YGGCCR | 3 cut(s) | 341, 901, 941 |
| Eam1104I | CTCTTC | 2 cut(s) | 768, 1491 |
| EarI | CTCTTC | 2 cut(s) | 768, 1491 |
| Eco130I | CCWWGG | 4 cut(s) | 1086, 1424, 1515, 1992 |
| Eco147I | AGGCCT | 1 cut(s) | 1453 |
| Eco24I | GRGCYC | 1 cut(s) | 1553 |
| Eco47I | GGWCC | 3 cut(s) | 1178, 1777, 2024 |
| Eco57I | CTGAAG | 4 cut(s) | 38, 792, 1665, 1783 |
| Eco88I | CYCGRG | 1 cut(s) | 662 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1549, 1777, 2024 |
| EcoRII | CCWGG | 2 cut(s) | 943, 2020 |
| EcoT14I | CCWWGG | 4 cut(s) | 1086, 1424, 1515, 1992 |
| EcoT22I | ATGCAT | 3 cut(s) | 125, 565, 1718 |
| EcoT38I | GRGCYC | 1 cut(s) | 1553 |
| ErhI | CCWWGG | 4 cut(s) | 1086, 1424, 1515, 1992 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 124, 156, 1247, 1279, 1408, 1440 |
| FaqI | GGGAC | 3 cut(s) | 443, 798, 1844 |
| FauNDI | CATATG | 3 cut(s) | 425, 1555, 1760 |
| Fnu4HI | GCNGC | 7 cut(s) | 86, 89, 193, 1432, 1684, 1852, 1870 |
| FriOI | GRGCYC | 1 cut(s) | 1553 |
| Fsp4HI | GCNGC | 7 cut(s) | 86, 89, 193, 1432, 1684, 1852, 1870 |
| FspBI | CTAG | 8 cut(s) | 56, 579, 1449, 1883, 1934, 1968, 2040, 2105 |
| FspI | TGCGCA | 1 cut(s) | 1471 |
| GlaI | GCGC | 4 cut(s) | 724, 894, 1430, 1471 |
| GluI | GCNGC | 7 cut(s) | 86, 89, 193, 1432, 1684, 1852, 1870 |
| GsaI | CCCAGC | 1 cut(s) | 1081 |
| GsuI | CTGGAG | 2 cut(s) | 718, 1555 |
| HaeII | RGCGCY | 1 cut(s) | 1432 |
| HaeIII | GGCC | 8 cut(s) | 343, 486, 903, 943, 1137, 1393, 1453, 1551 |
| HapII | CCGG | 6 cut(s) | 340, 904, 1181, 1680, 1696, 1862 |
| HgaI | GACGC | 1 cut(s) | 1839 |
| HhaI | GCGC | 4 cut(s) | 725, 895, 1431, 1472 |
| Hin6I | GCGC | 4 cut(s) | 723, 893, 1429, 1470 |
| HinP1I | GCGC | 4 cut(s) | 723, 893, 1429, 1470 |
| HincII | GTYRAC | 1 cut(s) | 740 |
| HindII | GTYRAC | 1 cut(s) | 740 |
| HinfI | GANTC | 7 cut(s) | 128, 329, 626, 806, 1442, 1813, 1835 |
| HpaII | CCGG | 6 cut(s) | 340, 904, 1181, 1680, 1696, 1862 |
| HphI | GGTGA | 5 cut(s) | 323, 617, 1241, 1504, 2028 |
| Hpy166II | GTNNAC | 6 cut(s) | 608, 740, 1651, 1829, 1951, 2036 |
| Hpy188I | TCNGA | 8 cut(s) | 976, 1009, 1111, 1375, 1645, 1702, 1774, 1842 |
| Hpy188III | TCNNGA | 7 cut(s) | 630, 664, 707, 770, 783, 1382, 1596 |
| Hpy8I | GTNNAC | 6 cut(s) | 608, 740, 1651, 1829, 1951, 2036 |
| HpyCH4III | ACNGT | 6 cut(s) | 325, 370, 926, 1026, 1042, 1790 |
| HpyCH4IV | ACGT | 3 cut(s) | 1299, 1476, 1731 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 720, 1097, 1763, 1800, 1830 |
| HpyF3I | CTNAG | 7 cut(s) | 149, 1304, 1372, 1415, 1701, 1773, 2120 |
| HpySE526I | ACGT | 3 cut(s) | 1299, 1476, 1731 |
| HspAI | GCGC | 4 cut(s) | 723, 893, 1429, 1470 |
| LmnI | GCTCC | 4 cut(s) | 572, 796, 1994, 2094 |
| Lsp1109I | GCAGC | 6 cut(s) | 72, 75, 179, 1418, 1863, 1881 |
| LweI | GCATC | 3 cut(s) | 938, 1082, 1679 |
| MaeI | CTAG | 8 cut(s) | 56, 579, 1449, 1883, 1934, 1968, 2040, 2105 |
| MaeII | ACGT | 3 cut(s) | 1299, 1476, 1731 |
| MaeIII | GTNAC | 4 cut(s) | 613, 1575, 1886, 2002 |
| MfeI | CAATTG | 1 cut(s) | 982 |
| MflI | RGATCY | 5 cut(s) | 30, 680, 823, 1378, 1486 |
| MhlI | GDGCHC | 5 cut(s) | 139, 339, 1021, 1553, 2091 |
| MlsI | TGGCCA | 1 cut(s) | 943 |
| MluNI | TGGCCA | 1 cut(s) | 943 |
| MlyI | GAGTC | 1 cut(s) | 1829 |
| Mox20I | TGGCCA | 1 cut(s) | 943 |
| Mph1103I | ATGCAT | 3 cut(s) | 125, 565, 1718 |
| MroXI | GAANNNNTTC | 2 cut(s) | 227, 961 |
| MscI | TGGCCA | 1 cut(s) | 943 |
| MseI | TTAA | 1 cut(s) | 272 |
| MslI | CAYNNNNRTG | 1 cut(s) | 708 |
| Msp20I | TGGCCA | 1 cut(s) | 943 |
| MspA1I | CMGCKG | 1 cut(s) | 1824 |
| MspI | CCGG | 6 cut(s) | 340, 904, 1181, 1680, 1696, 1862 |
| MspR9I | CCNGG | 4 cut(s) | 340, 945, 1862, 2022 |
| MunI | CAATTG | 1 cut(s) | 982 |
| MvaI | CCWGG | 2 cut(s) | 945, 2022 |
| MvnI | CGCG | 3 cut(s) | 723, 893, 1833 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 720, 1097, 1763, 1800, 1830 |
| NciI | CCSGG | 2 cut(s) | 340, 1862 |
| NdeI | CATATG | 3 cut(s) | 425, 1555, 1760 |
| NlaIV | GGNNCC | 5 cut(s) | 138, 574, 1551, 1756, 1779 |
| NmuCI | GTSAC | 3 cut(s) | 613, 1575, 2002 |
| NsbI | TGCGCA | 1 cut(s) | 1471 |
| NsiI | ATGCAT | 3 cut(s) | 125, 565, 1718 |
| NspI | RCATGY | 2 cut(s) | 438, 1720 |
| PaeR7I | CTCGAG | 1 cut(s) | 662 |
| PceI | AGGCCT | 1 cut(s) | 1453 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1305, 1969 |
| PdmI | GAANNNNTTC | 2 cut(s) | 227, 961 |
| PfeI | GAWTC | 6 cut(s) | 128, 329, 626, 806, 1442, 1813 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 534, 1207 |
| PfoI | TCCNGGA | 1 cut(s) | 1860 |
| PinAI | ACCGGT | 1 cut(s) | 1695 |
| PkrI | GCNGC | 7 cut(s) | 87, 90, 194, 1433, 1685, 1853, 1871 |
| PleI | GAGTC | 1 cut(s) | 1829 |
| PpsI | GAGTC | 1 cut(s) | 1829 |
| Ppu21I | YACGTR | 1 cut(s) | 1732 |
| PpuMI | RGGWCCY | 2 cut(s) | 1777, 2024 |
| Psp5II | RGGWCCY | 2 cut(s) | 1777, 2024 |
| Psp6I | CCWGG | 2 cut(s) | 943, 2020 |
| PspFI | CCCAGC | 1 cut(s) | 1077 |
| PspGI | CCWGG | 2 cut(s) | 943, 2020 |
| PspN4I | GGNNCC | 5 cut(s) | 138, 574, 1551, 1756, 1779 |
| PspOMI | GGGCCC | 1 cut(s) | 1549 |
| PspPI | GGNCC | 6 cut(s) | 1135, 1178, 1549, 1550, 1777, 2024 |
| PspPPI | RGGWCCY | 2 cut(s) | 1777, 2024 |
| PstI | CTGCAG | 1 cut(s) | 1436 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1772 |
| PsuI | RGATCY | 5 cut(s) | 30, 680, 823, 1378, 1486 |
| PvuII | CAGCTG | 1 cut(s) | 1824 |
| RsaI | GTAC | 6 cut(s) | 282, 1069, 1193, 1225, 1302, 1730 |
| RsaNI | GTAC | 6 cut(s) | 281, 1068, 1192, 1224, 1301, 1729 |
| RseI | CAYNNNNRTG | 1 cut(s) | 708 |
| SaqAI | TTAA | 1 cut(s) | 272 |
| SatI | GCNGC | 7 cut(s) | 86, 89, 193, 1432, 1684, 1852, 1870 |
| Sau96I | GGNCC | 6 cut(s) | 1135, 1178, 1549, 1550, 1777, 2024 |
| ScaI | AGTACT | 1 cut(s) | 282 |
| SchI | GAGTC | 1 cut(s) | 1829 |
| ScrFI | CCNGG | 4 cut(s) | 340, 945, 1862, 2022 |
| SduI | GDGCHC | 5 cut(s) | 139, 339, 1021, 1553, 2091 |
| SfaNI | GCATC | 3 cut(s) | 938, 1082, 1679 |
| SfcI | CTRYAG | 2 cut(s) | 1432, 1605 |
| Sfr274I | CTCGAG | 1 cut(s) | 662 |
| SinI | GGWCC | 3 cut(s) | 1178, 1777, 2024 |
| SlaI | CTCGAG | 1 cut(s) | 662 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 708 |
| SmlI | CTYRAG | 2 cut(s) | 662, 1804 |
| SmoI | CTYRAG | 2 cut(s) | 662, 1804 |
| SseBI | AGGCCT | 1 cut(s) | 1453 |
| SsiI | CCGC | 3 cut(s) | 186, 721, 1683 |
| SspMI | CTAG | 8 cut(s) | 56, 579, 1449, 1883, 1934, 1968, 2040, 2105 |
| StuI | AGGCCT | 1 cut(s) | 1453 |
| StyD4I | CCNGG | 4 cut(s) | 338, 943, 1860, 2020 |
| StyI | CCWWGG | 4 cut(s) | 1086, 1424, 1515, 1992 |
| TaaI | ACNGT | 6 cut(s) | 325, 370, 926, 1026, 1042, 1790 |
| TaiI | ACGT | 3 cut(s) | 1302, 1479, 1734 |
| TaqI | TCGA | 4 cut(s) | 542, 663, 1293, 1440 |
| TatI | WGTACW | 1 cut(s) | 280 |
| TauI | GCSGC | 1 cut(s) | 1686 |
| TfiI | GAWTC | 6 cut(s) | 128, 329, 626, 806, 1442, 1813 |
| Tru1I | TTAA | 1 cut(s) | 272 |
| Tru9I | TTAA | 1 cut(s) | 272 |
| TscAI | CASTG | 6 cut(s) | 21, 45, 373, 1795, 1948, 2011 |
| TseFI | GTSAC | 3 cut(s) | 613, 1575, 2002 |
| TseI | GCWGC | 6 cut(s) | 85, 88, 192, 1431, 1851, 1869 |
| Tsp45I | GTSAC | 3 cut(s) | 613, 1575, 2002 |
| TspRI | CASTG | 6 cut(s) | 21, 45, 373, 1795, 1948, 2011 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 534, 1207 |
| VpaK11BI | GGWCC | 3 cut(s) | 1178, 1777, 2024 |
| XapI | RAATTY | 3 cut(s) | 164, 379, 1398 |
| XceI | RCATGY | 2 cut(s) | 438, 1720 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 817 |
| XhoI | CTCGAG | 1 cut(s) | 662 |
| XmnI | GAANNNNTTC | 2 cut(s) | 227, 961 |
| XspI | CTAG | 8 cut(s) | 56, 579, 1449, 1883, 1934, 1968, 2040, 2105 |
| ZrmI | AGTACT | 1 cut(s) | 282 |
| Zsp2I | ATGCAT | 3 cut(s) | 125, 565, 1718 |