Rroxscaffold_3G00273020

HIPL1 protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0007012
Physical Location & Seq
Forward (+)
64947073 .. 64950459
3387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00273020.1

Sequence Viewer

Length: 2091 bp
ATGGGTGGTGTTCATGCAATTGGGCTCTTGCTTTGTTCCTTGGTGTTGCTTTTTGATTCTTCAATTTCACACCCTCTATGTATTGATTCAAGAGCACCTTCTACTCTGAGCACCCCACTCAAGTTTTGTTCTTACAATGGAACTGCTTGCTGCAACTCCACTCAAGATTCACAGATACAGAAGCAATTCGTGTCCATGAACATCTCTAGTTCTGCTTGTGCTTCTCTCTTGAAACCAGTACTTTGTGCTAGGTGTGATCCATTTGCTGCTGAGCTATTCACAGTTGATTCTGTGCCTAGGCCAGTTCCTATACTATGCAACTCAACTATTTTAGCAAATTCATCCCAGTCTTTAATCCAAGTAACAAGTGACTTTTGCTCTAACTTATGGGACACATGTCAAAATGTGTCCATGTCCAACTCCCCATTTGCTCCTTCATTACAAGGCCAAGCTGGAATACCTGTGAATTCCACTGTTAGTGAGCTAACCCAATTCTGGCAATCGAAAGCCGATTTCTGCAATGCATTTGGTGGAGTTTCTAGTGAGGACTCGGTGTGTTTTGCTGGTGAGCCTGTCAAACTGAATGACACTGGAACTCCTATCCCCCCACATGGTTTGTGCCTCGAGAAAATCGGTAATGGATCTTACCTCAACATGGTTGCTCATCCTGATGGCTCAAACCGTGCATTTTTCTCTAGTCAAGAGGGTAAGGTTTGGTTGGCAACTATACCGGAAGAAGGGTCAGGAGAGGCAATGGGGCTTGATGAGTCCAGTCCCTTTGTGGATTTAACTGATCAAGTTCATTTTGATACGGCGTTTGGCATGATGGGTATGGCTTTTCATCCCAATTTTGCACAAAATGGGAGGTTCTATGCTTCATTTAACTGTGACAAGGAGAAGTGGCCAGGATGTACAGGAAGATGTTCATGTAATTCAGATGTCAACTGTGATCCTTCAAAGCTTGGATCTGATAATGGTGCTCAACCATGCCAGTACCAAACTGTTATAGCAGAATACACTGCTAATGGTACCGCGTCACAACCTTCCTTGGCTACAAGTGCTAAACCATCAGAAGTTAGAAGGATATTTACTATGGGCCTCCCTTTCACAGGTCATCATGCAGGACAGATACTCTTTGGACCGGAGGATGGGTATTTATACTTCATGATGGGAGATGGTGGAGGCACAGGTGATCCCTACAACTTCTCTCAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTCGACGTTGATAATGTACTAAGTGCTTCAGAAATTGATAAACTTGTTCTATGGGGAAACTACTCTATCCCAAAAGACAATCCAGTAAGTGAAGATCCAGAACTGAGGCCGGAAATATGGGCCACAGGGCTAAGAAATCCTTGGCGCTGCAGTTTCGATTCAGAAGAGCCTTCATATTTTATATGTGCAGATGTTGGACAGGATCTGTATGAAGAGGTGGATGTTATCACCAAGGGTGGAAACTATGGCTGGAATGTTTATGAGGGCCCCTATCCTTTCACTCTTCCAAACTCATCTAGTAAAAGCACATCCACAAAACTCACAAACCCCATTTTTCCAATAATGGGGTACAACCATTCTGAGGTAAACAAGAATGAAGGTTCAGCATCTATTACTGGGGGATATATCTATCGCTCCAAAACTGATCCATGCATGTATGGAAGGTATGTATATGGAGATCTGTATGCTGGTGCCATATGGGCTGGCAGTGAAGACCCAGAAAACAGTGGCAACTTTAGCACAAGCAAAATCCCCTTCAGCTGCGGACGTGACTCTCCCATACCTTGTACCTCTGTCCCTGGAAGCAGTCTTCCGGCTCTGGGCTACATTTTCTCATTCGGGGAGGACAACCGCAAAGATATCTTTGTCCTGTCGAGCTCTGGTGTTTATAGAGTTGTTCGTCCTAGTCGCTGTAATTACACTTGCTCCAAGGAAAATGTTACTTCTGTTGCAACCCCAGGTCCTTCTGCTTCACCTAATGATGCTTGCTGGATAAGTAAGCCATCTAAGAGCACAGTGCTCCTAGTCTCTTCTCTGGTACTTCTGCTTCTGCTCAGTTTTGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0031224 GO:0031225 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Folate_rec GSDH

Protein Analysis

696

Amino Acids

75.0

Weight (kDa)

4.85

Isoelectric Point (pI)

41.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GSDH PF07995 228 - 527 2.2e-21 Glucose / Sorbosone dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1028
AccB1I GGYRCC 2 cut(s) 1028, 1715
AccII CGCG 1 cut(s) 1034
AciI CCGC 3 cut(s) 1032, 1788, 1876
AclWI GGATC 8 cut(s) 251, 649, 944, 973, 1187, 1334, 1455, 1664
AcoI YGGCCR 1 cut(s) 902
AcsI RAATTY 2 cut(s) 337, 466
AcuI CTGAAG 2 cut(s) 1257, 1765
AfaI GTAC 8 cut(s) 240, 913, 995, 1030, 1263, 1595, 1813, 2064
AfiI CCNNNNNNNGG 9 cut(s) 495, 611, 655, 737, 1109, 1148, 1589, 1606, 1844
AflIII ACRYGT 1 cut(s) 395
AgsI TTSAA 4 cut(s) 63, 90, 232, 957
AjiI CACGTC 1 cut(s) 1793
AjnI CCWGG 3 cut(s) 904, 1822, 1981
AluBI AGCT 6 cut(s) 274, 452, 484, 961, 1785, 1902
AluI AGCT 6 cut(s) 274, 452, 484, 961, 1785, 1902
Alw21I GWGCWC 6 cut(s) 97, 113, 982, 1904, 2039, 2046
Alw26I GTCTC 1 cut(s) 2056
AlwI GGATC 8 cut(s) 251, 649, 944, 973, 1187, 1334, 1455, 1664
AlwNI CAGNNNCTG 1 cut(s) 1450
Ama87I CYCGRG 1 cut(s) 623
AoxI GGCC 7 cut(s) 299, 445, 902, 1096, 1352, 1365, 1510
ApaI GGGCCC 1 cut(s) 1514
ApeKI GCWGC 4 cut(s) 150, 266, 1392, 1785
ApoI RAATTY 2 cut(s) 337, 466
Asp700I GAANNNNTTC 2 cut(s) 185, 922
Asp718I GGTACC 1 cut(s) 1028
AspA2I CCTAGG 1 cut(s) 296
AspLEI GCGC 1 cut(s) 1392
AspS9I GGNCC 6 cut(s) 1096, 1139, 1365, 1510, 1511, 1985
AsuHPI GGTGA 4 cut(s) 578, 1202, 1465, 1989
AvaI CYCGRG 1 cut(s) 623
AvaII GGWCC 2 cut(s) 1139, 1985
AvrII CCTAGG 1 cut(s) 296
BaeGI GKGCMC 1 cut(s) 1514
BalI TGGCCA 1 cut(s) 904
BanI GGYRCC 2 cut(s) 1028, 1715
BanII GRGCYC 3 cut(s) 27, 1514, 1904
BarI GAAGNNNNNNTAC 6 cut(s) 1072, 1104, 1145, 1177, 2055, 2087
BbsI GAAGAC 2 cut(s) 1743, 1826
Bbv12I GWGCWC 6 cut(s) 97, 113, 982, 1904, 2039, 2046
BbvI GCAGC 4 cut(s) 137, 253, 1379, 1772
BccI CCATC 7 cut(s) 665, 820, 1075, 1142, 1162, 1169, 2035
BceAI ACGGC 1 cut(s) 828
BciT130I CCWGG 3 cut(s) 906, 1824, 1983
BclI TGATCA 1 cut(s) 793
BcoDI GTCTC 1 cut(s) 2056
BfaI CTAG 9 cut(s) 207, 249, 297, 540, 696, 1542, 1929, 2048, 2089
BfmI CTRYAG 1 cut(s) 1393
BfoI RGCGCY 1 cut(s) 1393
BglI GCCNNNNNGGC 1 cut(s) 1724
BglII AGATCT 1 cut(s) 1702
BisI GCNGC 4 cut(s) 151, 267, 1393, 1786
BlnI CCTAGG 1 cut(s) 296
BlpI GCTNAGC 1 cut(s) 270
BlsI GCNGC 4 cut(s) 152, 268, 1394, 1787
BmcAI AGTACT 1 cut(s) 240
Bme1390I CCNGG 3 cut(s) 906, 1824, 1983
Bme18I GGWCC 2 cut(s) 1139, 1985
BmeT110I CYCGRG 1 cut(s) 623
BmgBI CACGTC 1 cut(s) 1793
BmgT120I GGNCC 6 cut(s) 1096, 1139, 1365, 1510, 1511, 1985
BmiI GGNNCC 4 cut(s) 1030, 1512, 1513, 1717
BmrFI CCNGG 3 cut(s) 906, 1824, 1983
BmrI ACTGGG 2 cut(s) 340, 1650
BmsI GCATC 2 cut(s) 1640, 1996
BmuI ACTGGG 2 cut(s) 340, 1650
BoxI GACNNNNGTC 1 cut(s) 396
BpiI GAAGAC 2 cut(s) 1743, 1826
Bpu1102I GCTNAGC 1 cut(s) 270
BpuEI CTTGAG 2 cut(s) 104, 147
BsaJI CCNNGG 8 cut(s) 39, 296, 1047, 1385, 1476, 1822, 1953, 1981
BsaWI WCCGGW 2 cut(s) 730, 1141
BsaXI ACNNNNNCTCC 6 cut(s) 580, 610, 1136, 1166, 1934, 1964
Bsc4I CCNNNNNNNGG 9 cut(s) 495, 611, 655, 737, 1109, 1148, 1589, 1606, 1844
Bse1I ACTGG 8 cut(s) 236, 302, 346, 595, 771, 991, 1328, 1645
Bse3DI GCAATG 3 cut(s) 526, 759, 1223
BseBI CCWGG 3 cut(s) 906, 1824, 1983
BseDI CCNNGG 8 cut(s) 39, 296, 1047, 1385, 1476, 1822, 1953, 1981
BseGI GGATG 7 cut(s) 341, 664, 841, 914, 1153, 1471, 1553
BseLI CCNNNNNNNGG 9 cut(s) 495, 611, 655, 737, 1109, 1148, 1589, 1606, 1844
BseMI GCAATG 3 cut(s) 526, 759, 1223
BseMII CTCAG 4 cut(s) 98, 261, 1340, 1596
BseNI ACTGG 8 cut(s) 236, 302, 346, 595, 771, 991, 1328, 1645
BseSI GKGCMC 1 cut(s) 1514
BseXI GCAGC 4 cut(s) 137, 253, 1379, 1772
BsgI GTGCAG 1 cut(s) 1452
Bsh1236I CGCG 1 cut(s) 1034
BshFI GGCC 7 cut(s) 301, 447, 904, 1098, 1354, 1367, 1512
BshNI GGYRCC 2 cut(s) 1028, 1715
BsiHKAI GWGCWC 6 cut(s) 97, 113, 982, 1904, 2039, 2046
BsiHKCI CYCGRG 1 cut(s) 623
BsiSI CCGG 4 cut(s) 731, 1142, 1355, 1838
BslFI GGGAC 3 cut(s) 404, 759, 1805
BslI CCNNNNNNNGG 9 cut(s) 495, 611, 655, 737, 1109, 1148, 1589, 1606, 1844
BsmAI GTCTC 1 cut(s) 2056
BsmFI GGGAC 3 cut(s) 404, 759, 1805
BsnI GGCC 7 cut(s) 301, 447, 904, 1098, 1354, 1367, 1512
BsoBI CYCGRG 1 cut(s) 623
Bsp120I GGGCCC 1 cut(s) 1510
Bsp1286I GDGCHC 8 cut(s) 27, 97, 113, 982, 1514, 1904, 2039, 2046
Bsp1407I TGTACA 1 cut(s) 911
Bsp1720I GCTNAGC 1 cut(s) 270
BspACI CCGC 3 cut(s) 1032, 1788, 1876
BspANI GGCC 7 cut(s) 301, 447, 904, 1098, 1354, 1367, 1512
BspCNI CTCAG 5 cut(s) 99, 262, 1341, 1597, 2091
BspFNI CGCG 1 cut(s) 1034
BspHI TCATGA 1 cut(s) 1164
BspLI GGNNCC 4 cut(s) 1030, 1512, 1513, 1717
BspMAI CTGCAG 1 cut(s) 1397
BspPI GGATC 8 cut(s) 251, 649, 944, 973, 1187, 1334, 1455, 1664
BspQI GCTCTTC 1 cut(s) 1404
BspT107I GGYRCC 2 cut(s) 1028, 1715
BsrDI GCAATG 3 cut(s) 526, 759, 1223
BsrGI TGTACA 1 cut(s) 911
BsrI ACTGG 8 cut(s) 236, 302, 346, 595, 771, 991, 1328, 1645
BssECI CCNNGG 8 cut(s) 39, 296, 1047, 1385, 1476, 1822, 1953, 1981
BssT1I CCWWGG 6 cut(s) 39, 296, 1047, 1385, 1476, 1953
Bst2UI CCWGG 3 cut(s) 906, 1824, 1983
Bst4CI ACNGT 8 cut(s) 283, 475, 683, 887, 947, 1003, 1751, 2041
Bst6I CTCTTC 4 cut(s) 1404, 1452, 1533, 2059
BstAUI TGTACA 1 cut(s) 911
BstC8I GCNNGC 3 cut(s) 148, 1729, 2011
BstDEI CTNAG 8 cut(s) 107, 270, 1265, 1349, 1376, 1605, 2031, 2078
BstENI CCTNNNNNAGG 1 cut(s) 1107
BstF5I GGATG 7 cut(s) 341, 664, 841, 914, 1153, 1471, 1553
BstFNI CGCG 1 cut(s) 1034
BstH2I RGCGCY 1 cut(s) 1393
BstHHI GCGC 1 cut(s) 1392
BstMAI GTCTC 1 cut(s) 2056
BstMWI GCNNNNNNNGC 3 cut(s) 1058, 1724, 1761
BstNI CCWGG 3 cut(s) 906, 1824, 1983
BstNSI RCATGY 2 cut(s) 399, 1681
BstPAI GACNNNNGTC 1 cut(s) 396
BstSCI CCNGG 3 cut(s) 904, 1822, 1981
BstSFI CTRYAG 1 cut(s) 1393
BstSLI GKGCMC 1 cut(s) 1514
BstUI CGCG 1 cut(s) 1034
BstV1I GCAGC 4 cut(s) 137, 253, 1379, 1772
BstV2I GAAGAC 2 cut(s) 1743, 1826
BstX2I RGATCY 5 cut(s) 641, 965, 1339, 1447, 1702
BstYI RGATCY 5 cut(s) 641, 965, 1339, 1447, 1702
BsuRI GGCC 7 cut(s) 301, 447, 904, 1098, 1354, 1367, 1512
BtrI CACGTC 1 cut(s) 1793
BtsCI GGATG 7 cut(s) 341, 664, 841, 914, 1153, 1471, 1553
BtsI GCAGTG 2 cut(s) 1017, 1738
BtsIMutI CAGTG 6 cut(s) 471, 588, 1017, 1738, 1756, 2046
Cac8I GCNNGC 3 cut(s) 148, 1729, 2011
CaiI CAGNNNCTG 1 cut(s) 1450
CciI TCATGA 1 cut(s) 1164
CfoI GCGC 1 cut(s) 1392
Cfr13I GGNCC 6 cut(s) 1096, 1139, 1365, 1510, 1511, 1985
CseI GACGC 1 cut(s) 1023
Csp6I GTAC 8 cut(s) 239, 912, 994, 1029, 1262, 1594, 1812, 2063
CspCI CAANNNNNGTGG 2 cut(s) 597, 632
CviQI GTAC 8 cut(s) 239, 912, 994, 1029, 1262, 1594, 1812, 2063
DdeI CTNAG 8 cut(s) 107, 270, 1265, 1349, 1376, 1605, 2031, 2078
EaeI YGGCCR 1 cut(s) 902
Eam1104I CTCTTC 4 cut(s) 1404, 1452, 1533, 2059
EarI CTCTTC 4 cut(s) 1404, 1452, 1533, 2059
Ecl136II GAGCTC 1 cut(s) 1902
Eco130I CCWWGG 6 cut(s) 39, 296, 1047, 1385, 1476, 1953
Eco24I GRGCYC 3 cut(s) 27, 1514, 1904
Eco32I GATATC 1 cut(s) 1885
Eco47I GGWCC 2 cut(s) 1139, 1985
Eco53kI GAGCTC 1 cut(s) 1902
Eco57I CTGAAG 2 cut(s) 1257, 1765
Eco88I CYCGRG 1 cut(s) 623
EcoICRI GAGCTC 1 cut(s) 1902
EcoNI CCTNNNNNAGG 1 cut(s) 1107
EcoO109I RGGNCCY 3 cut(s) 1510, 1511, 1985
EcoRI GAATTC 1 cut(s) 466
EcoRII CCWGG 3 cut(s) 904, 1822, 1981
EcoRV GATATC 1 cut(s) 1885
EcoT14I CCWWGG 6 cut(s) 39, 296, 1047, 1385, 1476, 1953
EcoT22I ATGCAT 2 cut(s) 526, 1679
EcoT38I GRGCYC 3 cut(s) 27, 1514, 1904
ErhI CCWWGG 6 cut(s) 39, 296, 1047, 1385, 1476, 1953
FalI AAGNNNNNCTT 4 cut(s) 82, 114, 1369, 1401
FaqI GGGAC 3 cut(s) 404, 759, 1805
FauNDI CATATG 1 cut(s) 1721
FbaI TGATCA 1 cut(s) 793
Fnu4HI GCNGC 4 cut(s) 151, 267, 1393, 1786
FokI GGATG 7 cut(s) 328, 651, 828, 921, 1160, 1478, 1540
FriOI GRGCYC 3 cut(s) 27, 1514, 1904
Fsp4HI GCNGC 4 cut(s) 151, 267, 1393, 1786
FspBI CTAG 9 cut(s) 207, 249, 297, 540, 696, 1542, 1929, 2048, 2089
GlaI GCGC 1 cut(s) 1391
GluI GCNGC 4 cut(s) 151, 267, 1393, 1786
HaeII RGCGCY 1 cut(s) 1393
HaeIII GGCC 7 cut(s) 301, 447, 904, 1098, 1354, 1367, 1512
HapII CCGG 4 cut(s) 731, 1142, 1355, 1838
HgaI GACGC 1 cut(s) 1023
HhaI GCGC 1 cut(s) 1392
Hin6I GCGC 1 cut(s) 1390
HinP1I GCGC 1 cut(s) 1390
HincII GTYRAC 1 cut(s) 943
HindII GTYRAC 1 cut(s) 943
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 8 cut(s) 56, 86, 167, 287, 548, 767, 1403, 1796
HpaII CCGG 4 cut(s) 731, 1142, 1355, 1838
HphI GGTGA 4 cut(s) 578, 1202, 1465, 1989
Hpy166II GTNNAC 2 cut(s) 943, 1612
Hpy188I TCNGA 7 cut(s) 108, 937, 970, 1072, 1276, 1408, 1606
Hpy188III TCNNGA 9 cut(s) 90, 164, 229, 625, 668, 701, 744, 1165, 1343
Hpy8I GTNNAC 2 cut(s) 943, 1612
Hpy99I CGWCG 1 cut(s) 1253
HpyCH4III ACNGT 8 cut(s) 283, 475, 683, 887, 947, 1003, 1751, 2041
HpyCH4IV ACGT 2 cut(s) 1251, 1792
HpyF10VI GCNNNNNNNGC 3 cut(s) 1058, 1724, 1761
HpyF3I CTNAG 8 cut(s) 107, 270, 1265, 1349, 1376, 1605, 2031, 2078
HpySE526I ACGT 2 cut(s) 1251, 1792
HspAI GCGC 1 cut(s) 1390
KpnI GGTACC 1 cut(s) 1032
Ksp22I TGATCA 1 cut(s) 793
LguI GCTCTTC 1 cut(s) 1404
LmnI GCTCC 4 cut(s) 436, 1664, 1955, 2049
Lsp1109I GCAGC 4 cut(s) 137, 253, 1379, 1772
LweI GCATC 2 cut(s) 1640, 1996
MaeI CTAG 9 cut(s) 207, 249, 297, 540, 696, 1542, 1929, 2048, 2089
MaeII ACGT 2 cut(s) 1251, 1792
MaeIII GTNAC 6 cut(s) 361, 368, 887, 1035, 1793, 1963
MfeI CAATTG 1 cut(s) 18
MflI RGATCY 5 cut(s) 641, 965, 1339, 1447, 1702
MhlI GDGCHC 8 cut(s) 27, 97, 113, 982, 1514, 1904, 2039, 2046
MlsI TGGCCA 1 cut(s) 904
MluNI TGGCCA 1 cut(s) 904
MlyI GAGTC 3 cut(s) 542, 776, 1790
MmeI TCCRAC 2 cut(s) 441, 1420
Mox20I TGGCCA 1 cut(s) 904
Mph1103I ATGCAT 2 cut(s) 526, 1679
MroXI GAANNNNTTC 2 cut(s) 185, 922
MscI TGGCCA 1 cut(s) 904
MseI TTAA 3 cut(s) 353, 788, 882
MslI CAYNNNNRTG 1 cut(s) 669
Msp20I TGGCCA 1 cut(s) 904
MspA1I CMGCKG 1 cut(s) 1785
MspI CCGG 4 cut(s) 731, 1142, 1355, 1838
MspR9I CCNGG 3 cut(s) 906, 1824, 1983
MunI CAATTG 1 cut(s) 18
MvaI CCWGG 3 cut(s) 906, 1824, 1983
MvnI CGCG 1 cut(s) 1034
MwoI GCNNNNNNNGC 3 cut(s) 1058, 1724, 1761
NdeI CATATG 1 cut(s) 1721
NlaIV GGNNCC 4 cut(s) 1030, 1512, 1513, 1717
NmuCI GTSAC 4 cut(s) 368, 887, 1035, 1793
NsiI ATGCAT 2 cut(s) 526, 1679
NspI RCATGY 2 cut(s) 399, 1681
PaeR7I CTCGAG 1 cut(s) 623
PagI TCATGA 1 cut(s) 1164
PciI ACATGT 1 cut(s) 395
PciSI GCTCTTC 1 cut(s) 1404
PdmI GAANNNNTTC 2 cut(s) 185, 922
PfeI GAWTC 5 cut(s) 56, 86, 167, 287, 1403
PkrI GCNGC 4 cut(s) 152, 268, 1394, 1787
PleI GAGTC 3 cut(s) 542, 775, 1790
PpsI GAGTC 3 cut(s) 542, 775, 1790
PpuMI RGGWCCY 1 cut(s) 1985
PscI ACATGT 1 cut(s) 395
PshAI GACNNNNGTC 1 cut(s) 396
Psp124BI GAGCTC 1 cut(s) 1904
Psp5II RGGWCCY 1 cut(s) 1985
Psp6I CCWGG 3 cut(s) 904, 1822, 1981
PspGI CCWGG 3 cut(s) 904, 1822, 1981
PspN4I GGNNCC 4 cut(s) 1030, 1512, 1513, 1717
PspOMI GGGCCC 1 cut(s) 1510
PspPI GGNCC 6 cut(s) 1096, 1139, 1365, 1510, 1511, 1985
PspPPI RGGWCCY 1 cut(s) 1985
PstI CTGCAG 1 cut(s) 1397
PstNI CAGNNNCTG 1 cut(s) 1450
PsuI RGATCY 5 cut(s) 641, 965, 1339, 1447, 1702
PvuII CAGCTG 1 cut(s) 1785
RsaI GTAC 8 cut(s) 240, 913, 995, 1030, 1263, 1595, 1813, 2064
RsaNI GTAC 8 cut(s) 239, 912, 994, 1029, 1262, 1594, 1812, 2063
RseI CAYNNNNRTG 1 cut(s) 669
SacI GAGCTC 1 cut(s) 1904
SapI GCTCTTC 1 cut(s) 1404
SaqAI TTAA 3 cut(s) 353, 788, 882
SatI GCNGC 4 cut(s) 151, 267, 1393, 1786
Sau96I GGNCC 6 cut(s) 1096, 1139, 1365, 1510, 1511, 1985
ScaI AGTACT 1 cut(s) 240
SchI GAGTC 3 cut(s) 542, 776, 1790
ScrFI CCNGG 3 cut(s) 906, 1824, 1983
SduI GDGCHC 8 cut(s) 27, 97, 113, 982, 1514, 1904, 2039, 2046
SfaNI GCATC 2 cut(s) 1640, 1996
SfcI CTRYAG 1 cut(s) 1393
Sfr274I CTCGAG 1 cut(s) 623
SinI GGWCC 2 cut(s) 1139, 1985
SlaI CTCGAG 1 cut(s) 623
SmiMI CAYNNNNRTG 1 cut(s) 669
SmlI CTYRAG 3 cut(s) 119, 162, 623
SmoI CTYRAG 3 cut(s) 119, 162, 623
SsiI CCGC 3 cut(s) 1032, 1788, 1876
SspMI CTAG 9 cut(s) 207, 249, 297, 540, 696, 1542, 1929, 2048, 2089
SstI GAGCTC 1 cut(s) 1904
StyD4I CCNGG 3 cut(s) 904, 1822, 1981
StyI CCWWGG 6 cut(s) 39, 296, 1047, 1385, 1476, 1953
TaaI ACNGT 8 cut(s) 283, 475, 683, 887, 947, 1003, 1751, 2041
TaiI ACGT 2 cut(s) 1254, 1795
TaqI TCGA 5 cut(s) 503, 624, 1248, 1401, 1898
TatI WGTACW 3 cut(s) 238, 911, 1261
TfiI GAWTC 5 cut(s) 56, 86, 167, 287, 1403
Tru1I TTAA 3 cut(s) 353, 788, 882
Tru9I TTAA 3 cut(s) 353, 788, 882
TscAI CASTG 6 cut(s) 478, 595, 1024, 1738, 1756, 2046
TseFI GTSAC 4 cut(s) 368, 887, 1035, 1793
TseI GCWGC 4 cut(s) 150, 266, 1392, 1785
Tsp45I GTSAC 4 cut(s) 368, 887, 1035, 1793
TspRI CASTG 6 cut(s) 478, 595, 1024, 1738, 1756, 2046
VpaK11BI GGWCC 2 cut(s) 1139, 1985
XagI CCTNNNNNAGG 1 cut(s) 1107
XapI RAATTY 2 cut(s) 337, 466
XceI RCATGY 2 cut(s) 399, 1681
XcmI CCANNNNNNNNNTGG 1 cut(s) 778
XhoI CTCGAG 1 cut(s) 623
XmaJI CCTAGG 1 cut(s) 296
XmnI GAANNNNTTC 2 cut(s) 185, 922
XspI CTAG 9 cut(s) 207, 249, 297, 540, 696, 1542, 1929, 2048, 2089
ZrmI AGTACT 1 cut(s) 240
Zsp2I ATGCAT 2 cut(s) 526, 1679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.