Prupe.5G238500_v2.0.a1

Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0024259
Physical Location & Seq
Forward (+)
18023574 .. 18026409
2836 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G238500.1

Sequence Viewer

Length: 1269 bp
ATGCTATTTAATTCATACAGAACCATTCCCATGCAAGCCAAGCAAGTCATTTGGTGTAGATTAATGGGGAGCAACAATTTCATCGCGGATATTAATCCAGATTCCATGGAGATGGAGACCATGATGGAAAGTCGACCAAGTGATAATATCAATATCTCCAAGAAAAATTCCACTGCTCCTCAAAATATATATCATCAGATCTTCGCCGGTTCCTGGAATGTTGGAGGTGTTTCACCTCCCGAGGTTTTGGACATACAAGAGTGGCTCAGACCGAATCATATTAACCCTCCTGCTAATATCTACGTTCTTGGGTTTCAAGAGATTGTGCCACTGAATGCAGCAAATATTGTTGTAAGATCTGAAAACCGCAAGATTTGCGAGAAATGGAATTCATTGATTAGGGCAGCTCTTAATGACCCTGACCCTAAGAATAATATTACACAAGACTTCCGATGCATAATTAGTAAGCAAATGGTCGGAATATTGTTATCTGTTTGGGTTAGGAGTGATCTCTGCCAATACATTAGACAGCTCAGTGTCTCATGTGTTGGCTGTGGTCTCATGGGTTGCCTAGGGAACAAGGGTTCGGTGTCAGTTAGATTTTGGCTGCATGAAACAAGCTTTTGCTTTGTGTGTAGTCATCTTGCTTCCGGAGGAAAAGAAGGTGATCAACGACGCAGAAACGCAAACGCAGCTGAGATTTTATCTCGCACAACCTTTCCTCCCGGGCCCTTCCCTAATTTCACCACTAAAATTCTTGATCACGATAGGGTGATCTGGCTTGGAGACTTGAACTATAGAATCTACTTGCCTGACGCCACAACGCAGTATCTTGTGGAGAAGCAAAAGTGGAACCTTTTGTTGGAATATGATCAGCTAAAGGTGGAACTCATGGAAGGACATGTATTCGAAGGTTGGCATGAAGGAGTAATAAACTTCGCCCCTAGCTACAAATATTACAAGAATTCGGAACTTTACTTTGGCTGCGATGAGAAGAGAAAACACAATAAAAGGCGTGCTCCAGCATGGTGTGATCGAATCATATGGTTCGGGAAGGGACTAAAGCAAAACCAGTATGACAGAGGCGAATTGAAGTTGTCGGACCATAGACCTGTCCGGGCGATTTTTATGGCAGAAATTAAGGTCTTAAGAGATCCTACAGGATTTCAAAGCTTTCTGTCAGACAGAATTATTTGCTTGCCAAACCATTTTGAAGAATGTTTCAATGACAAATATTCATGTAAATGGAGATCAAACTTCCATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00562 ko01100 ko04070 map00562 map01100 map04070
Pfam Domains
Protein Families
Exo_endo_phos

Protein Analysis

423

Amino Acids

48.93

Weight (kDa)

8.65

Isoelectric Point (pI)

50.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0024259)

Species Orthologous Gene IDs
malus_domestica MD06G1234000.v1.1 MD14G1240700.v1.1
prunus_persica Prupe.5G238500_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 133
AccII CGCG 1 cut(s) 86
AccIII TCCGGA 1 cut(s) 650
AciI CCGC 2 cut(s) 86, 367
AclWI GGATC 1 cut(s) 1148
AcsI RAATTY 4 cut(s) 166, 388, 753, 964
AcyI GRCGYC 1 cut(s) 816
AfiI CCNNNNNNNGG 2 cut(s) 213, 862
AflII CTTAAG 1 cut(s) 1147
AflIII ACRYGT 1 cut(s) 901
AgsI TTSAA 6 cut(s) 317, 793, 1093, 1169, 1214, 1225
AjnI CCWGG 1 cut(s) 212
AjuI GAANNNNNNNTTGG 4 cut(s) 845, 877, 963, 995
AloI GAACNNNNNNTCC 2 cut(s) 568, 600
AluBI AGCT 7 cut(s) 407, 532, 621, 695, 877, 948, 1173
AluI AGCT 7 cut(s) 407, 532, 621, 695, 877, 948, 1173
Alw21I GWGCWC 1 cut(s) 1021
Alw26I GTCTC 4 cut(s) 110, 544, 563, 780
AlwI GGATC 1 cut(s) 1148
Ama87I CYCGRG 2 cut(s) 239, 725
Aor13HI TCCGGA 1 cut(s) 650
AoxI GGCC 1 cut(s) 728
ApaI GGGCCC 1 cut(s) 732
ApeKI GCWGC 5 cut(s) 338, 404, 607, 692, 984
ApoI RAATTY 4 cut(s) 166, 388, 753, 964
AseI ATTAAT 2 cut(s) 62, 93
AspA2I CCTAGG 1 cut(s) 571
AspS9I GGNCC 3 cut(s) 728, 729, 1102
AsuC2I CCSGG 3 cut(s) 726, 727, 1118
AsuHPI GGTGA 4 cut(s) 225, 677, 736, 784
AsuII TTCGAA 1 cut(s) 909
AvaI CYCGRG 2 cut(s) 239, 725
AvaII GGWCC 1 cut(s) 1102
AvrII CCTAGG 1 cut(s) 571
BaeGI GKGCMC 1 cut(s) 732
BanII GRGCYC 1 cut(s) 732
Bbv12I GWGCWC 1 cut(s) 1021
BbvI GCAGC 5 cut(s) 350, 416, 594, 704, 971
BccI CCATC 2 cut(s) 106, 118
BciT130I CCWGG 1 cut(s) 214
BclI TGATCA 3 cut(s) 667, 760, 871
BcnI CCSGG 3 cut(s) 726, 727, 1118
BcoDI GTCTC 4 cut(s) 110, 544, 563, 780
BfaI CTAG 2 cut(s) 572, 945
BfmI CTRYAG 2 cut(s) 796, 1158
BfrI CTTAAG 1 cut(s) 1147
BglII AGATCT 2 cut(s) 198, 356
BisI GCNGC 5 cut(s) 339, 405, 608, 693, 985
BlnI CCTAGG 1 cut(s) 571
BlsI GCNGC 5 cut(s) 340, 406, 609, 694, 986
Bme1390I CCNGG 4 cut(s) 214, 726, 727, 1118
Bme18I GGWCC 1 cut(s) 1102
BmeT110I CYCGRG 2 cut(s) 239, 725
BmgT120I GGNCC 3 cut(s) 728, 729, 1102
BmiI GGNNCC 3 cut(s) 211, 730, 854
BmrFI CCNGG 4 cut(s) 214, 726, 727, 1118
BmsI GCATC 1 cut(s) 443
BpmI CTGGAG 1 cut(s) 1005
Bpu14I TTCGAA 1 cut(s) 909
BpuMI CCSGG 3 cut(s) 726, 727, 1118
BsaBI GATNNNNATC 1 cut(s) 93
BsaHI GRCGYC 1 cut(s) 816
BsaI GGTCTC 2 cut(s) 110, 563
BsaJI CCNNGG 4 cut(s) 105, 240, 571, 725
BsaWI WCCGGW 1 cut(s) 650
BsaXI ACNNNNNCTCC 2 cut(s) 706, 736
Bsc4I CCNNNNNNNGG 2 cut(s) 213, 862
Bse118I RCCGGY 1 cut(s) 206
Bse1I ACTGG 1 cut(s) 1072
Bse8I GATNNNNATC 1 cut(s) 93
BseAI TCCGGA 1 cut(s) 650
BseBI CCWGG 1 cut(s) 214
BseDI CCNNGG 4 cut(s) 105, 240, 571, 725
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 2 cut(s) 213, 862
BseMII CTCAG 3 cut(s) 280, 547, 687
BseNI ACTGG 1 cut(s) 1072
BseRI GAGGAG 1 cut(s) 168
BseSI GKGCMC 1 cut(s) 732
BseXI GCAGC 5 cut(s) 350, 416, 594, 704, 971
Bsh1236I CGCG 1 cut(s) 86
BshFI GGCC 1 cut(s) 730
BsiHKAI GWGCWC 1 cut(s) 1021
BsiHKCI CYCGRG 2 cut(s) 239, 725
BsiSI CCGG 4 cut(s) 207, 651, 726, 1117
BslFI GGGAC 1 cut(s) 1071
BslI CCNNNNNNNGG 2 cut(s) 213, 862
BsmAI GTCTC 4 cut(s) 110, 544, 563, 780
BsmFI GGGAC 1 cut(s) 1071
BsmI GAATGC 1 cut(s) 340
BsnI GGCC 1 cut(s) 730
Bso31I GGTCTC 2 cut(s) 110, 563
BsoBI CYCGRG 2 cut(s) 239, 725
Bsp119I TTCGAA 1 cut(s) 909
Bsp120I GGGCCC 1 cut(s) 728
Bsp1286I GDGCHC 2 cut(s) 732, 1021
Bsp13I TCCGGA 1 cut(s) 650
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 2 cut(s) 86, 367
BspANI GGCC 1 cut(s) 730
BspCNI CTCAG 3 cut(s) 279, 546, 688
BspEI TCCGGA 1 cut(s) 650
BspFNI CGCG 1 cut(s) 86
BspLI GGNNCC 3 cut(s) 211, 730, 854
BspPI GGATC 1 cut(s) 1148
BspT104I TTCGAA 1 cut(s) 909
BspTI CTTAAG 1 cut(s) 1147
BspTNI GGTCTC 2 cut(s) 110, 563
BsrFI RCCGGY 1 cut(s) 206
BsrI ACTGG 1 cut(s) 1072
BssAI RCCGGY 1 cut(s) 206
BssECI CCNNGG 4 cut(s) 105, 240, 571, 725
BssNI GRCGYC 1 cut(s) 816
BssT1I CCWWGG 2 cut(s) 105, 571
Bst2UI CCWGG 1 cut(s) 214
Bst6I CTCTTC 1 cut(s) 989
BstACI GRCGYC 1 cut(s) 816
BstAFI CTTAAG 1 cut(s) 1147
BstAPI GCANNNNNTGC 1 cut(s) 375
BstBI TTCGAA 1 cut(s) 909
BstC8I GCNNGC 3 cut(s) 36, 1017, 1199
BstDEI CTNAG 4 cut(s) 266, 426, 533, 696
BstDSI CCRYGG 1 cut(s) 105
BstFNI CGCG 1 cut(s) 86
BstMAI GTCTC 4 cut(s) 110, 544, 563, 780
BstMWI GCNNNNNNNGC 3 cut(s) 40, 375, 692
BstNI CCWGG 1 cut(s) 214
BstNSI RCATGY 1 cut(s) 905
BstSCI CCNGG 4 cut(s) 212, 724, 725, 1116
BstSFI CTRYAG 2 cut(s) 796, 1158
BstSLI GKGCMC 1 cut(s) 732
BstUI CGCG 1 cut(s) 86
BstV1I GCAGC 5 cut(s) 350, 416, 594, 704, 971
BstX2I RGATCY 3 cut(s) 198, 356, 1153
BstXI CCANNNNNNTGG 1 cut(s) 112
BstYI RGATCY 3 cut(s) 198, 356, 1153
BsuRI GGCC 1 cut(s) 730
BtgI CCRYGG 1 cut(s) 105
BtgZI GCGATG 2 cut(s) 67, 1002
BtsI GCAGTG 1 cut(s) 171
BtsIMutI CAGTG 3 cut(s) 171, 329, 541
Cac8I GCNNGC 3 cut(s) 36, 1017, 1199
Cfr10I RCCGGY 1 cut(s) 206
Cfr13I GGNCC 3 cut(s) 728, 729, 1102
Cfr9I CCCGGG 1 cut(s) 725
CseI GACGC 2 cut(s) 684, 824
DdeI CTNAG 4 cut(s) 266, 426, 533, 696
Eam1104I CTCTTC 1 cut(s) 989
EarI CTCTTC 1 cut(s) 989
Eco130I CCWWGG 2 cut(s) 105, 571
Eco24I GRGCYC 1 cut(s) 732
Eco31I GGTCTC 2 cut(s) 110, 563
Eco47I GGWCC 1 cut(s) 1102
Eco88I CYCGRG 2 cut(s) 239, 725
EcoO109I RGGNCCY 1 cut(s) 729
EcoRI GAATTC 2 cut(s) 388, 964
EcoRII CCWGG 1 cut(s) 212
EcoT14I CCWWGG 2 cut(s) 105, 571
EcoT22I ATGCAT 1 cut(s) 458
EcoT38I GRGCYC 1 cut(s) 732
ErhI CCWWGG 2 cut(s) 105, 571
FaqI GGGAC 1 cut(s) 1071
FauNDI CATATG 1 cut(s) 1043
FbaI TGATCA 3 cut(s) 667, 760, 871
FblI GTMKAC 1 cut(s) 133
Fnu4HI GCNGC 5 cut(s) 339, 405, 608, 693, 985
FriOI GRGCYC 1 cut(s) 732
Fsp4HI GCNGC 5 cut(s) 339, 405, 608, 693, 985
FspBI CTAG 2 cut(s) 572, 945
GluI GCNGC 5 cut(s) 339, 405, 608, 693, 985
GsuI CTGGAG 1 cut(s) 1005
HaeIII GGCC 1 cut(s) 730
HapII CCGG 4 cut(s) 207, 651, 726, 1117
HgaI GACGC 2 cut(s) 684, 824
Hin1I GRCGYC 1 cut(s) 816
HincII GTYRAC 1 cut(s) 134
HindII GTYRAC 1 cut(s) 134
HindIII AAGCTT 2 cut(s) 619, 1171
HinfI GANTC 4 cut(s) 101, 274, 801, 1038
HpaII CCGG 4 cut(s) 207, 651, 726, 1117
HphI GGTGA 4 cut(s) 225, 677, 736, 784
Hpy166II GTNNAC 1 cut(s) 134
Hpy188I TCNGA 8 cut(s) 198, 269, 361, 452, 479, 970, 1102, 1183
Hpy188III TCNNGA 7 cut(s) 98, 239, 317, 651, 758, 764, 1051
Hpy8I GTNNAC 1 cut(s) 134
Hpy99I CGWCG 1 cut(s) 678
HpyAV CCTTC 6 cut(s) 656, 742, 890, 905, 917, 1048
HpyCH4IV ACGT 1 cut(s) 303
HpyCH4V TGCA 4 cut(s) 34, 338, 456, 610
HpyF10VI GCNNNNNNNGC 3 cut(s) 40, 375, 692
HpyF3I CTNAG 4 cut(s) 266, 426, 533, 696
HpySE526I ACGT 1 cut(s) 303
Hsp92I GRCGYC 1 cut(s) 816
Kpn2I TCCGGA 1 cut(s) 650
Ksp22I TGATCA 3 cut(s) 667, 760, 871
LmnI GCTCC 3 cut(s) 69, 181, 1024
Lsp1109I GCAGC 5 cut(s) 350, 416, 594, 704, 971
LweI GCATC 1 cut(s) 443
MaeI CTAG 2 cut(s) 572, 945
MaeII ACGT 1 cut(s) 303
MboII GAAGA 3 cut(s) 193, 1006, 1226
MflI RGATCY 3 cut(s) 198, 356, 1153
MhlI GDGCHC 2 cut(s) 732, 1021
MmeI TCCRAC 4 cut(s) 202, 457, 843, 1080
MnlI CCTC 8 cut(s) 189, 218, 235, 246, 297, 647, 732, 1076
Mph1103I ATGCAT 1 cut(s) 458
MroI TCCGGA 1 cut(s) 650
MseI TTAA 7 cut(s) 9, 62, 93, 282, 411, 1140, 1148
MslI CAYNNNNRTG 3 cut(s) 29, 110, 1243
MspA1I CMGCKG 1 cut(s) 695
MspCI CTTAAG 1 cut(s) 1147
MspI CCGG 4 cut(s) 207, 651, 726, 1117
MspR9I CCNGG 4 cut(s) 214, 726, 727, 1118
Mva1269I GAATGC 1 cut(s) 340
MvaI CCWGG 1 cut(s) 214
MvnI CGCG 1 cut(s) 86
MwoI GCNNNNNNNGC 3 cut(s) 40, 375, 692
NciI CCSGG 3 cut(s) 726, 727, 1118
NcoI CCATGG 1 cut(s) 105
NdeI CATATG 1 cut(s) 1043
NlaIV GGNNCC 3 cut(s) 211, 730, 854
NsiI ATGCAT 1 cut(s) 458
NspI RCATGY 1 cut(s) 905
NspV TTCGAA 1 cut(s) 909
PciI ACATGT 1 cut(s) 901
PctI GAATGC 1 cut(s) 340
PfeI GAWTC 4 cut(s) 101, 274, 801, 1038
PfoI TCCNGGA 1 cut(s) 212
PkrI GCNGC 5 cut(s) 340, 406, 609, 694, 986
PscI ACATGT 1 cut(s) 901
PshBI ATTAAT 2 cut(s) 62, 93
Psp6I CCWGG 1 cut(s) 212
PspGI CCWGG 1 cut(s) 212
PspN4I GGNNCC 3 cut(s) 211, 730, 854
PspOMI GGGCCC 1 cut(s) 728
PspPI GGNCC 3 cut(s) 728, 729, 1102
PsuI RGATCY 3 cut(s) 198, 356, 1153
PvuII CAGCTG 1 cut(s) 695
RseI CAYNNNNRTG 3 cut(s) 29, 110, 1243
SalI GTCGAC 1 cut(s) 132
SaqAI TTAA 7 cut(s) 9, 62, 93, 282, 411, 1140, 1148
SatI GCNGC 5 cut(s) 339, 405, 608, 693, 985
Sau96I GGNCC 3 cut(s) 728, 729, 1102
ScrFI CCNGG 4 cut(s) 214, 726, 727, 1118
SduI GDGCHC 2 cut(s) 732, 1021
SfaNI GCATC 1 cut(s) 443
SfcI CTRYAG 2 cut(s) 796, 1158
SfuI TTCGAA 1 cut(s) 909
SinI GGWCC 1 cut(s) 1102
SmaI CCCGGG 1 cut(s) 727
SmiMI CAYNNNNRTG 3 cut(s) 29, 110, 1243
SmlI CTYRAG 1 cut(s) 1147
SmoI CTYRAG 1 cut(s) 1147
SsiI CCGC 2 cut(s) 86, 367
SspI AATATT 5 cut(s) 346, 436, 483, 956, 1235
SspMI CTAG 2 cut(s) 572, 945
StyD4I CCNGG 4 cut(s) 212, 724, 725, 1116
StyI CCWWGG 2 cut(s) 105, 571
TaiI ACGT 1 cut(s) 306
TaqI TCGA 3 cut(s) 133, 909, 1036
TaqII GACCGA 1 cut(s) 286
TfiI GAWTC 4 cut(s) 101, 274, 801, 1038
Tru1I TTAA 7 cut(s) 9, 62, 93, 282, 411, 1140, 1148
Tru9I TTAA 7 cut(s) 9, 62, 93, 282, 411, 1140, 1148
TscAI CASTG 3 cut(s) 178, 336, 541
TseI GCWGC 5 cut(s) 338, 404, 607, 692, 984
TspDTI ATGAA 5 cut(s) 70, 381, 627, 936, 1227
TspMI CCCGGG 1 cut(s) 725
TspRI CASTG 3 cut(s) 178, 336, 541
Vha464I CTTAAG 1 cut(s) 1147
VpaK11BI GGWCC 1 cut(s) 1102
VspI ATTAAT 2 cut(s) 62, 93
XapI RAATTY 4 cut(s) 166, 388, 753, 964
XceI RCATGY 1 cut(s) 905
XmaI CCCGGG 1 cut(s) 725
XmaJI CCTAGG 1 cut(s) 571
XmiI GTMKAC 1 cut(s) 133
XspI CTAG 2 cut(s) 572, 945
Zsp2I ATGCAT 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.