Prupe.6G021800_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0016160
Physical Location & Seq
Reverse (-)
1753381 .. 1756596
3216 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G021800.1

Sequence Viewer

Length: 1464 bp
ATGACCATGGACCGACCGCAACCGAGCTCAGACTCCCCCACCCGAGAGCCGAAATCCCCTCTGGTGCTGTCCATCGAATGCCTCAAAGGCAGCTCGAAAGCCGACGAGTGGACTGGAGACATGCTCCAGACCGCAGACATCGTCGAGGAGCTCCGCATCGGCAGCTCCGTCACCGTTAAGTCGCCGTTTAAGAACGGAAAGAGCGGCGTCCAGAAGATCCTCCACGCCTCCTTTAAAGCCAAGGACACTTCTATCCTCGTCAAAGTCCGACGCGGCCGAGACGAGTTCGCGGAGTTGCAGGCTTGCATCGTCCCGAACGACTCTGCCGGTCGGAGCAAGCAGTACATGCTCAGGTCCATTGCCGACCCCAATTATACCGTCGGCTTCTGCGATCGCACGGAGGCCGACTGCTTCGAGCTCCAAGCTTCAAGGAACTCGAGGATGGTGAGTGCACTGACAACAGGTAGGCTTCAAGATGGGTATGTTTCATATCCATGGGAAAGGAGAATGCAGGAGATGCTAGCAGTTCCCCATTCTAGTTGCTTTCTATCTGTCCTCTTCCTTCCAAAGGCTTCGGATCGATCTGCTTCTCGCTACAACGACTTGGAGGACACCCTTGCTAGGGCTAATGTCTGGCTCATTGCCTCCCAGGCCTCCGGCGTCCCCGTCGTCTTCATGAACATCCAGACTGAGTCCCTCCTTACAAAGATTTCTGGAGAGACAGCTTCTTCCACTGTAAATGCAGGGTCATTATCTGACTTAGCTGATCTTGCAAGCGCAAGCTTATATGGTTTTGAAGATTACCATGGGGTTGACATTGGTGTAGTCCGAGCCGTTCGACTTTGGTATGCTCCTCTTGGGGGTGAAATCCCTGTTGAGGTCAAATTACAAGAAGGTGATTTTAAGCTTGGCTTCGCCATTAGCCGCACAGAAGAGGGGTTTATATACATTTCATCAGTCGTAGATGGTGATGAAAACACGCCTTCAAGCCGATCGGGGCTGAGCAATTTGTACAAGGAAGCAATGGAGGCATCAAGGCTGCTGGTGGTCTCAAGGGTCTCAAACCAGAAGGTGCTCCCTTGGATGGTTTCTTCAACCGGAGCAGTTCGATGCTTCGACACCATTTCTCTCAGCCAGAAGCTCTCCCTCCACCGGCACGCCAAGGTTCCTATTTCCATGCATGTCTTCATGTGGGATCGAGCCGTCGTTTCTCCAAGTGCAGGCCAAACCAGGTTCAGGAGCAGCGCCTCTCCCCCGCCAATCATCCCATTGCCGCCTGAGGTTCAATTGGCTAGACAACCAAATGAGAACCAAATACAACCTCTTCCACAAGAAGTGTTTGAAGATGAAAGTAGCAGTGAAGGTGTCTCCCAGAGATTATCAGAGGTCAGGCTTGAGAGAGATACAGCTGGAGAATCCTCTTTTAGGTTCCATGATTTTGCACTTTCTAGCAATTGGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

488

Amino Acids

53.68

Weight (kDa)

5.68

Isoelectric Point (pI)

53.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016160)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12070
fragaria_vesca FvH4_3g43310
malus_domestica MD11G1027800.v1.1
prunus_persica Prupe.6G021800_v2.0.a1
pyrus_communis pycom11g02140
rosa_chinensis RchiOBHm_Chr5g0077371
rosa_laevigata RLG00000036692
rosa_multiflora Rmu_sc0021981.1_g000001
rosa_roxburghii Rroxscaffold_1G00004530
rosa_rugosa Rorug05G0454600
rosa_samantha Rh5AG509500 Rh5BG531200 Rh5CG555500 Rh5DG543400
rosa_wichuraiana Rw5G046790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 204
AccII CGCG 2 cut(s) 273, 290
AciI CCGC 9 cut(s) 17, 132, 154, 204, 273, 290, 925, 1256, 1274
AclWI GGATC 3 cut(s) 211, 585, 1203
AcoI YGGCCR 1 cut(s) 274
AcyI GRCGYC 2 cut(s) 207, 660
AfaI GTAC 2 cut(s) 344, 1013
AgsI TTSAA 7 cut(s) 429, 473, 797, 987, 1095, 1286, 1343
AjnI CCWGG 2 cut(s) 648, 1229
Alw21I GWGCWC 5 cut(s) 29, 153, 420, 454, 1077
Alw26I GTCTC 6 cut(s) 111, 273, 713, 1054, 1063, 1372
Alw44I GTGCAC 1 cut(s) 450
AlwI GGATC 3 cut(s) 211, 585, 1203
Ama87I CYCGRG 2 cut(s) 42, 436
AoxI GGCC 4 cut(s) 274, 402, 651, 1222
ApaLI GTGCAC 1 cut(s) 450
ApeKI GCWGC 4 cut(s) 90, 162, 1039, 1242
AsiSI GCGATCGC 1 cut(s) 394
AspLEI GCGC 2 cut(s) 779, 1247
AspS9I GGNCC 2 cut(s) 10, 354
AsuHPI GGTGA 5 cut(s) 163, 457, 875, 908, 980
AsuNHI GCTAGC 1 cut(s) 520
AvaI CYCGRG 2 cut(s) 42, 436
AvaII GGWCC 2 cut(s) 10, 354
AxyI CCTNAGG 1 cut(s) 1278
BaeGI GKGCMC 1 cut(s) 454
BanII GRGCYC 3 cut(s) 29, 153, 420
BbsI GAAGAC 2 cut(s) 664, 1177
Bbv12I GWGCWC 5 cut(s) 29, 153, 420, 454, 1077
BbvI GCAGC 4 cut(s) 102, 174, 1026, 1254
BccI CCATC 5 cut(s) 80, 436, 470, 959, 1078
BceAI ACGGC 3 cut(s) 169, 818, 1187
BciT130I CCWGG 2 cut(s) 650, 1231
BcoDI GTCTC 6 cut(s) 111, 273, 713, 1054, 1063, 1372
BfaI CTAG 5 cut(s) 521, 537, 621, 1293, 1449
BfoI RGCGCY 1 cut(s) 1248
BglI GCCNNNNNGGC 2 cut(s) 87, 650
BisI GCNGC 8 cut(s) 91, 163, 205, 274, 925, 1040, 1243, 1274
BlpI GCTNAGC 1 cut(s) 1001
BlsI GCNGC 8 cut(s) 92, 164, 206, 275, 926, 1041, 1244, 1275
Bme1390I CCNGG 2 cut(s) 650, 1231
Bme18I GGWCC 2 cut(s) 10, 354
BmeT110I CYCGRG 2 cut(s) 42, 436
BmgT120I GGNCC 2 cut(s) 10, 354
BmiI GGNNCC 2 cut(s) 1167, 1430
BmrFI CCNGG 2 cut(s) 650, 1231
BmsI GCATC 5 cut(s) 165, 315, 507, 1040, 1100
BmtI GCTAGC 1 cut(s) 524
BpiI GAAGAC 2 cut(s) 664, 1177
BplI GAGNNNNNCTC 2 cut(s) 108, 140
BpmI CTGGAG 4 cut(s) 110, 135, 735, 1431
Bpu10I CCTNAGC 1 cut(s) 350
Bpu1102I GCTNAGC 1 cut(s) 1001
BpuEI CTTGAG 2 cut(s) 1036, 1415
Bsa29I ATCGAT 1 cut(s) 580
BsaHI GRCGYC 2 cut(s) 207, 660
BsaI GGTCTC 2 cut(s) 1054, 1063
BsaJI CCNNGG 7 cut(s) 6, 240, 494, 648, 805, 1079, 1161
BsaWI WCCGGW 1 cut(s) 1097
Bse118I RCCGGY 2 cut(s) 326, 1152
Bse1I ACTGG 1 cut(s) 118
Bse21I CCTNAGG 1 cut(s) 1278
Bse3DI GCAATG 4 cut(s) 357, 639, 1029, 1268
BseBI CCWGG 2 cut(s) 650, 1231
BseCI ATCGAT 1 cut(s) 580
BseDI CCNNGG 7 cut(s) 6, 240, 494, 648, 805, 1079, 1161
BseGI GGATG 4 cut(s) 447, 681, 1089, 1263
BseMI GCAATG 4 cut(s) 357, 639, 1029, 1268
BseMII CTCAG 6 cut(s) 42, 364, 681, 992, 1144, 1269
BseNI ACTGG 1 cut(s) 118
BseRI GAGGAG 2 cut(s) 161, 843
BseSI GKGCMC 1 cut(s) 454
BseX3I CGGCCG 1 cut(s) 274
BseXI GCAGC 4 cut(s) 102, 174, 1026, 1254
BsgI GTGCAG 1 cut(s) 1239
Bsh1236I CGCG 2 cut(s) 273, 290
Bsh1285I CGRYCG 5 cut(s) 17, 277, 331, 394, 995
BshFI GGCC 4 cut(s) 276, 404, 653, 1224
BshVI ATCGAT 1 cut(s) 580
BsiEI CGRYCG 5 cut(s) 17, 277, 331, 394, 995
BsiHKAI GWGCWC 5 cut(s) 29, 153, 420, 454, 1077
BsiHKCI CYCGRG 2 cut(s) 42, 436
BsiSI CCGG 4 cut(s) 327, 657, 1098, 1153
BslFI GGGAC 3 cut(s) 296, 647, 679
BsmAI GTCTC 6 cut(s) 111, 273, 713, 1054, 1063, 1372
BsmBI CGTCTC 1 cut(s) 273
BsmFI GGGAC 3 cut(s) 296, 647, 679
BsmI GAATGC 2 cut(s) 83, 513
BsnI GGCC 4 cut(s) 276, 404, 653, 1224
Bso31I GGTCTC 2 cut(s) 1054, 1063
BsoBI CYCGRG 2 cut(s) 42, 436
Bsp1286I GDGCHC 5 cut(s) 29, 153, 420, 454, 1077
Bsp1407I TGTACA 1 cut(s) 1011
Bsp143I GATC 7 cut(s) 216, 391, 577, 581, 766, 992, 1195
Bsp1720I GCTNAGC 1 cut(s) 1001
Bsp19I CCATGG 3 cut(s) 6, 494, 805
BspACI CCGC 9 cut(s) 17, 132, 154, 204, 273, 290, 925, 1256, 1274
BspANI GGCC 4 cut(s) 276, 404, 653, 1224
BspCNI CTCAG 6 cut(s) 41, 363, 682, 993, 1143, 1270
BspDI ATCGAT 1 cut(s) 580
BspFNI CGCG 2 cut(s) 273, 290
BspHI TCATGA 1 cut(s) 675
BspLI GGNNCC 2 cut(s) 1167, 1430
BspOI GCTAGC 1 cut(s) 524
BspPI GGATC 3 cut(s) 211, 585, 1203
BspTNI GGTCTC 2 cut(s) 1054, 1063
BsrBI CCGCTC 1 cut(s) 204
BsrDI GCAATG 4 cut(s) 357, 639, 1029, 1268
BsrFI RCCGGY 2 cut(s) 326, 1152
BsrGI TGTACA 1 cut(s) 1011
BsrI ACTGG 1 cut(s) 118
BssAI RCCGGY 2 cut(s) 326, 1152
BssECI CCNNGG 7 cut(s) 6, 240, 494, 648, 805, 1079, 1161
BssMI GATC 7 cut(s) 216, 391, 577, 581, 766, 992, 1195
BssNI GRCGYC 2 cut(s) 207, 660
BssT1I CCWWGG 6 cut(s) 6, 240, 494, 805, 1079, 1161
Bst2UI CCWGG 2 cut(s) 650, 1231
Bst4CI ACNGT 3 cut(s) 175, 379, 736
Bst6I CTCTTC 3 cut(s) 563, 927, 1329
BstACI GRCGYC 2 cut(s) 207, 660
BstAPI GCANNNNNTGC 2 cut(s) 346, 517
BstAUI TGTACA 1 cut(s) 1011
BstC8I GCNNGC 8 cut(s) 300, 304, 338, 522, 775, 781, 1158, 1222
BstDEI CTNAG 7 cut(s) 28, 350, 690, 760, 1001, 1130, 1278
BstDSI CCRYGG 3 cut(s) 6, 494, 805
BstENI CCTNNNNNAGG 2 cut(s) 566, 1423
BstF5I GGATG 4 cut(s) 447, 681, 1089, 1263
BstFNI CGCG 2 cut(s) 273, 290
BstH2I RGCGCY 1 cut(s) 1248
BstHHI GCGC 2 cut(s) 779, 1247
BstKTI GATC 7 cut(s) 219, 394, 580, 584, 769, 995, 1198
BstMAI GTCTC 6 cut(s) 111, 273, 713, 1054, 1063, 1372
BstMBI GATC 7 cut(s) 216, 391, 577, 581, 766, 992, 1195
BstMCI CGRYCG 5 cut(s) 17, 277, 331, 394, 995
BstMWI GCNNNNNNNGC 7 cut(s) 87, 162, 346, 517, 650, 770, 1028
BstNI CCWGG 2 cut(s) 650, 1231
BstNSI RCATGY 3 cut(s) 124, 349, 1184
BstSCI CCNGG 2 cut(s) 648, 1229
BstSLI GKGCMC 1 cut(s) 454
BstUI CGCG 2 cut(s) 273, 290
BstV1I GCAGC 4 cut(s) 102, 174, 1026, 1254
BstV2I GAAGAC 2 cut(s) 664, 1177
BstX2I RGATCY 1 cut(s) 216
BstYI RGATCY 1 cut(s) 216
BstZI CGGCCG 1 cut(s) 274
Bsu15I ATCGAT 1 cut(s) 580
Bsu36I CCTNAGG 1 cut(s) 1278
BsuRI GGCC 4 cut(s) 276, 404, 653, 1224
BsuTUI ATCGAT 1 cut(s) 580
BtgI CCRYGG 3 cut(s) 6, 494, 805
BtsCI GGATG 4 cut(s) 447, 681, 1089, 1263
BtsI GCAGTG 1 cut(s) 1363
BtsIMutI CAGTG 3 cut(s) 452, 732, 1363
Cac8I GCNNGC 8 cut(s) 300, 304, 338, 522, 775, 781, 1158, 1222
CciI TCATGA 1 cut(s) 675
CfoI GCGC 2 cut(s) 779, 1247
Cfr10I RCCGGY 2 cut(s) 326, 1152
Cfr13I GGNCC 2 cut(s) 10, 354
ClaI ATCGAT 1 cut(s) 580
CseI GACGC 3 cut(s) 196, 279, 649
CsiI ACCWGGT 1 cut(s) 1229
Csp6I GTAC 2 cut(s) 343, 1012
CviQI GTAC 2 cut(s) 343, 1012
DdeI CTNAG 7 cut(s) 28, 350, 690, 760, 1001, 1130, 1278
DpnI GATC 7 cut(s) 218, 393, 579, 583, 768, 994, 1197
DpnII GATC 7 cut(s) 216, 391, 577, 581, 766, 992, 1195
DraI TTTAAA 1 cut(s) 235
EaeI YGGCCR 1 cut(s) 274
EagI CGGCCG 1 cut(s) 274
Eam1104I CTCTTC 3 cut(s) 563, 927, 1329
EarI CTCTTC 3 cut(s) 563, 927, 1329
Ecl136II GAGCTC 3 cut(s) 27, 151, 418
EclXI CGGCCG 1 cut(s) 274
Eco130I CCWWGG 6 cut(s) 6, 240, 494, 805, 1079, 1161
Eco147I AGGCCT 1 cut(s) 653
Eco24I GRGCYC 3 cut(s) 29, 153, 420
Eco31I GGTCTC 2 cut(s) 1054, 1063
Eco47I GGWCC 2 cut(s) 10, 354
Eco52I CGGCCG 1 cut(s) 274
Eco53kI GAGCTC 3 cut(s) 27, 151, 418
Eco81I CCTNAGG 1 cut(s) 1278
Eco88I CYCGRG 2 cut(s) 42, 436
EcoICRI GAGCTC 3 cut(s) 27, 151, 418
EcoNI CCTNNNNNAGG 2 cut(s) 566, 1423
EcoRII CCWGG 2 cut(s) 648, 1229
EcoT14I CCWWGG 6 cut(s) 6, 240, 494, 805, 1079, 1161
EcoT22I ATGCAT 1 cut(s) 1182
EcoT38I GRGCYC 3 cut(s) 29, 153, 420
ErhI CCWWGG 6 cut(s) 6, 240, 494, 805, 1079, 1161
Esp3I CGTCTC 1 cut(s) 273
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 3 cut(s) 296, 647, 679
FauI CCCGC 1 cut(s) 1263
Fnu4HI GCNGC 8 cut(s) 91, 163, 205, 274, 925, 1040, 1243, 1274
FokI GGATG 4 cut(s) 454, 668, 1096, 1250
FriOI GRGCYC 3 cut(s) 29, 153, 420
Fsp4HI GCNGC 8 cut(s) 91, 163, 205, 274, 925, 1040, 1243, 1274
FspBI CTAG 5 cut(s) 521, 537, 621, 1293, 1449
GlaI GCGC 2 cut(s) 778, 1246
GluI GCNGC 8 cut(s) 91, 163, 205, 274, 925, 1040, 1243, 1274
GsuI CTGGAG 4 cut(s) 110, 135, 735, 1431
HaeII RGCGCY 1 cut(s) 1248
HaeIII GGCC 4 cut(s) 276, 404, 653, 1224
HapII CCGG 4 cut(s) 327, 657, 1098, 1153
HgaI GACGC 3 cut(s) 196, 279, 649
HhaI GCGC 2 cut(s) 779, 1247
Hin1I GRCGYC 2 cut(s) 207, 660
Hin6I GCGC 2 cut(s) 777, 1245
HinP1I GCGC 2 cut(s) 777, 1245
HincII GTYRAC 1 cut(s) 814
HindII GTYRAC 1 cut(s) 814
HindIII AAGCTT 3 cut(s) 423, 781, 905
HinfI GANTC 4 cut(s) 32, 320, 692, 1415
HpaII CCGG 4 cut(s) 327, 657, 1098, 1153
HphI GGTGA 5 cut(s) 163, 457, 875, 908, 980
Hpy166II GTNNAC 3 cut(s) 111, 452, 814
Hpy188I TCNGA 7 cut(s) 31, 269, 333, 577, 757, 830, 1384
Hpy188III TCNNGA 8 cut(s) 127, 211, 313, 473, 676, 685, 714, 1237
Hpy8I GTNNAC 3 cut(s) 111, 452, 814
Hpy99I CGWCG 6 cut(s) 107, 146, 273, 383, 671, 1208
HpyAV CCTTC 5 cut(s) 572, 887, 993, 1063, 1355
HpyCH4III ACNGT 3 cut(s) 175, 379, 736
HpyCH4V TGCA 9 cut(s) 298, 306, 452, 511, 743, 773, 1180, 1220, 1442
HpyF10VI GCNNNNNNNGC 7 cut(s) 87, 162, 346, 517, 650, 770, 1028
HpyF3I CTNAG 7 cut(s) 28, 350, 690, 760, 1001, 1130, 1278
Hsp92I GRCGYC 2 cut(s) 207, 660
HspAI GCGC 2 cut(s) 777, 1245
Kzo9I GATC 7 cut(s) 216, 391, 577, 581, 766, 992, 1195
Lsp1109I GCAGC 4 cut(s) 102, 174, 1026, 1254
LweI GCATC 5 cut(s) 165, 315, 507, 1040, 1100
MabI ACCWGGT 1 cut(s) 1229
MaeI CTAG 5 cut(s) 521, 537, 621, 1293, 1449
MaeIII GTNAC 1 cut(s) 169
MalI GATC 7 cut(s) 218, 393, 579, 583, 768, 994, 1197
MbiI CCGCTC 1 cut(s) 204
MboI GATC 7 cut(s) 216, 391, 577, 581, 766, 992, 1195
MfeI CAATTG 2 cut(s) 1286, 1453
MflI RGATCY 1 cut(s) 216
MhlI GDGCHC 5 cut(s) 29, 153, 420, 454, 1077
MluCI AATT 5 cut(s) 370, 884, 1006, 1286, 1453
MlyI GAGTC 3 cut(s) 26, 314, 701
MmeI TCCRAC 2 cut(s) 292, 311
Mph1103I ATGCAT 1 cut(s) 1182
MseI TTAA 4 cut(s) 177, 189, 234, 903
MslI CAYNNNNRTG 1 cut(s) 493
MspA1I CMGCKG 1 cut(s) 1409
MspI CCGG 4 cut(s) 327, 657, 1098, 1153
MspR9I CCNGG 2 cut(s) 650, 1231
MunI CAATTG 2 cut(s) 1286, 1453
Mva1269I GAATGC 2 cut(s) 83, 513
MvaI CCWGG 2 cut(s) 650, 1231
MvnI CGCG 2 cut(s) 273, 290
MwoI GCNNNNNNNGC 7 cut(s) 87, 162, 346, 517, 650, 770, 1028
NcoI CCATGG 3 cut(s) 6, 494, 805
NdeII GATC 7 cut(s) 216, 391, 577, 581, 766, 992, 1195
NheI GCTAGC 1 cut(s) 520
NlaIV GGNNCC 2 cut(s) 1167, 1430
NmeAIII GCCGAG 1 cut(s) 302
NmuCI GTSAC 1 cut(s) 169
NsiI ATGCAT 1 cut(s) 1182
NspI RCATGY 3 cut(s) 124, 349, 1184
PaeR7I CTCGAG 1 cut(s) 436
PagI TCATGA 1 cut(s) 675
PceI AGGCCT 1 cut(s) 653
PcsI WCGNNNNNNNCGW 3 cut(s) 165, 315, 387
PctI GAATGC 2 cut(s) 83, 513
PfeI GAWTC 1 cut(s) 1415
PflFI GACNNNGTC 2 cut(s) 140, 691
PkrI GCNGC 8 cut(s) 92, 164, 206, 275, 926, 1041, 1244, 1275
Ple19I CGATCG 2 cut(s) 394, 995
PleI GAGTC 3 cut(s) 26, 314, 700
PpsI GAGTC 3 cut(s) 26, 314, 700
Psp124BI GAGCTC 3 cut(s) 29, 153, 420
Psp6I CCWGG 2 cut(s) 648, 1229
PspGI CCWGG 2 cut(s) 648, 1229
PspN4I GGNNCC 2 cut(s) 1167, 1430
PspPI GGNCC 2 cut(s) 10, 354
PspXI VCTCGAGB 1 cut(s) 436
PsuI RGATCY 1 cut(s) 216
PsyI GACNNNGTC 2 cut(s) 140, 691
PvuI CGATCG 2 cut(s) 394, 995
PvuII CAGCTG 1 cut(s) 1409
RgaI GCGATCGC 1 cut(s) 394
RsaI GTAC 2 cut(s) 344, 1013
RsaNI GTAC 2 cut(s) 343, 1012
RseI CAYNNNNRTG 1 cut(s) 493
SacI GAGCTC 3 cut(s) 29, 153, 420
SaqAI TTAA 4 cut(s) 177, 189, 234, 903
SatI GCNGC 8 cut(s) 91, 163, 205, 274, 925, 1040, 1243, 1274
Sau3AI GATC 7 cut(s) 216, 391, 577, 581, 766, 992, 1195
Sau96I GGNCC 2 cut(s) 10, 354
SchI GAGTC 3 cut(s) 26, 314, 701
ScrFI CCNGG 2 cut(s) 650, 1231
SduI GDGCHC 5 cut(s) 29, 153, 420, 454, 1077
SexAI ACCWGGT 1 cut(s) 1229
SfaAI GCGATCGC 1 cut(s) 394
SfaNI GCATC 5 cut(s) 165, 315, 507, 1040, 1100
Sfr274I CTCGAG 1 cut(s) 436
SgfI GCGATCGC 1 cut(s) 394
SinI GGWCC 2 cut(s) 10, 354
SlaI CTCGAG 1 cut(s) 436
SmiMI CAYNNNNRTG 1 cut(s) 493
SmlI CTYRAG 3 cut(s) 436, 1051, 1394
SmoI CTYRAG 3 cut(s) 436, 1051, 1394
Sse9I AATT 5 cut(s) 370, 884, 1006, 1286, 1453
SseBI AGGCCT 1 cut(s) 653
SsiI CCGC 9 cut(s) 17, 132, 154, 204, 273, 290, 925, 1256, 1274
SspMI CTAG 5 cut(s) 521, 537, 621, 1293, 1449
SstI GAGCTC 3 cut(s) 29, 153, 420
StuI AGGCCT 1 cut(s) 653
StyD4I CCNGG 2 cut(s) 648, 1229
StyI CCWWGG 6 cut(s) 6, 240, 494, 805, 1079, 1161
TaaI ACNGT 3 cut(s) 175, 379, 736
TaqII GACCGA 1 cut(s) 27
TasI AATT 5 cut(s) 370, 884, 1006, 1286, 1453
TatI WGTACW 2 cut(s) 342, 1011
TauI GCSGC 4 cut(s) 207, 276, 927, 1276
TfiI GAWTC 1 cut(s) 1415
Tru1I TTAA 4 cut(s) 177, 189, 234, 903
Tru9I TTAA 4 cut(s) 177, 189, 234, 903
TscAI CASTG 3 cut(s) 459, 739, 1363
TseFI GTSAC 1 cut(s) 169
TseI GCWGC 4 cut(s) 90, 162, 1039, 1242
Tsp45I GTSAC 1 cut(s) 169
TspDTI ATGAA 7 cut(s) 477, 664, 692, 942, 987, 1177, 1362
TspGWI ACGGA 3 cut(s) 157, 210, 413
TspRI CASTG 3 cut(s) 459, 739, 1363
Tth111I GACNNNGTC 2 cut(s) 140, 691
VneI GTGCAC 1 cut(s) 450
VpaK11BI GGWCC 2 cut(s) 10, 354
XagI CCTNNNNNAGG 2 cut(s) 566, 1423
XceI RCATGY 3 cut(s) 124, 349, 1184
XhoI CTCGAG 1 cut(s) 436
XspI CTAG 5 cut(s) 521, 537, 621, 1293, 1449
Zsp2I ATGCAT 1 cut(s) 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.